Pregenerated sensors for RBM42 (Homo sapiens)
Ensembl gene IDs: ENSG00000126254Ensembl transcript IDs: ENST00000262633.9, ENST00000586618.5, ENST00000588161.5, ENST00000589559.5, ENST00000589871.1, ENST00000592202.5, ENST00000592526.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCCTCCATTTCCTTCAAGCGTTCCTCGCCGCTTTTGCCCGGGATaGCAGCGCCAGGACCCGGGACCACGGGTCCTCCTGCACCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: PPPFPSSVPRRFCPG*QRQDPGPRVLLHPG Trigger: TCCCGGGTGCAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | GCGGGGGCCGGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAAGCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: AGAGCPPQEHGFSSL*AVQVTPITRAKANR Trigger: CCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCCGGCCCCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588161.5 |
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| CDS GCA 90 bp | GGGCCATCTCCGCCTCCATTTCCTTCAAGCGTTCCTCGCCGCTTTTaGCCGGGATGCCAGCGCCAGGACCCGGGACCACGGGTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GPSPPPFPSSVPRRF*PGCQRQDPGPRVLL Trigger: CAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | GGGGCCGGCTGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAAGCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: GAGCCPPQEHGFSSL*AVQVTPITRAKANR Trigger: CCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCAGCCGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS CCA 90 bp | GGGGGCCACAGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAAGCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: GGHSCPPQEHGFSSL*AVQVTPITRAKANR Trigger: CCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCTGTGGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262633.9 |
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| CDS GCA 90 bp | CCCAGCCATCGCTGCCGTCGTCGCTGTCGCCGCTACTACAGTCTCTaGTTAGCCGCCGCCGCTGGTTCTGCTGTCTACTCTCCCCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: PSHRCRRRCRRYYSL*LAAAAGSAVYSPPS Trigger: CGAAGGGGGAGAGTAGACAGCAGAACCAGCGGCGGCGGCTAAGCAGAGACTGTAGTAGCGGCGACAGCGACGACGGCAGCGATGGCTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000592202.5 |
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| CDS CCA 90 bp | TCGTCGCTGTCGCCGCTACTACAGTCTCTGCTTAGCCGCCGCCGCTaGTTCTGCTGTCTACTCTCCCCCTTCGTCCGGGTGGGCTCCCGA | + |
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Preference number: 5 (lower is better) Translates to: SSLSPLLQSLLSRRR*FCCLLSPFVRVGSR Trigger: TCGGGAGCCCACCCGGACGAAGGGGGAGAGTAGACAGCAGAACCAGCGGCGGCGGCTAAGCAGAGACTGTAGTAGCGGCGACAGCGACGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262633.9 ENST00000588161.5 |
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| CDS CCA 90 bp | CCCAGACTCACCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAAGCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: PRLTCPPQEHGFSSL*AVQVTPITRAKANR Trigger: CCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGGTGAGTCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS GCA 90 bp | GTGTTGGTCGCGATAATTGGGCGGATCACAGGAGCCGCTGGGACCTaGATCGCTTCTACTGTGGGGACCGTGGGGACAGTGGGCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: VLVAIIGRITGAAGT*IASTVGTVGTVGTA Trigger: TGCGGTGCCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | GGGGACAGTGGGCACCGCAGGCACAGCAGTTGGGATTCCAGGTACTaGAGCCCCCAGAACTTCCTGCTCAAACAGGGCCATCTCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GDSGHRRHSSWDSRY*SPQNFLLKQGHLRL Trigger: GAGGCGGAGATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | TCACAGGAGCCGCTGGGACCTGCATCGCTTCTACTGTGGGGACCGTaGGGACAGTGGGCACCGCAGGCACAGCAGTTGGGATTCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SQEPLGPASLLLWGP*GQWAPQAQQLGFQV Trigger: TACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | GAGAGCGGAATCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAAGCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: ESGICPPQEHGFSSL*AVQVTPITRAKANR Trigger: CCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGATTCCGCTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589871.1 |
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| CDS TCA 90 bp | GCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTGGGCTGTCCAGGTaGCTCCGATCACCAGGGCCAAAGCCAACAGGGCCTACAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: ARRRNMASRASGLSR*LRSPGPKPTGPTKG Trigger: TCCTTTTGTAGGCCCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592526.1 |
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| CDS CCA 90 bp | CTGGTATGTGTTGGTCGCGATAATTGGGCGGATCACAGGAGCCGCTaGGACCTGCATCGCTTCTACTGTGGGGACCGTGGGGACAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LVCVGRDNWADHRSR*DLHRFYCGDRGDSG Trigger: CCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACACATACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS TCA 90 bp | GGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTTaGTGGGGCGCGAGCCCACATACTTCCCTGCATCCCACTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GPRPDSGPSTCSCEA*WGASPHTSLHPTPA Trigger: TGCTGGAGTGGGATGCAGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS TCA 90 bp | GGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTTaGTGGGGCGCGAGCCCACATACTTCCCATTCATCTCACGCATGG | + |
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Preference number: 5 (lower is better) Translates to: GPRPDSGPSTCSCEA*WGASPHTSHSSHAW Trigger: CCATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 90 bp | CTCCAGAGTCTGCTGGACCTGCTGGTATGTGTTGGTCGCGATAATTaGGCGGATCACAGGAGCCGCTGGGACCTGCATCGCTTCTACTGT | + |
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Preference number: 5 (lower is better) Translates to: LQSLLDLLVCVGRDN*ADHRSRWDLHRFYC Trigger: ACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACACATACCAGCAGGTCCAGCAGACTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 90 bp | CTTGCCTGTGCGCTTGTCACGGATCACCTTGGCCTTAAGGAAGGATaGGAAGCGGCTGAAGGCGCGTGCCAAGATGTCATCGTTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: LACALVTDHLGLKEG*EAAEGACQDVIVHL Trigger: GAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGCACAGGCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS GCA 90 bp | CCTGGCCACAGACCCTATCTCAGGCCCAGCTTCTTCTTTTCCTTCTaGTTCTTGCGGACCACGTCCAGATTCCGGTCCTTCCACATGCTC | + |
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Preference number: 5 (lower is better) Translates to: PGHRPYLRPSFFFSF*FLRTTSRFRSFHML Trigger: GAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTGAGATAGGGTCTGTGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS GCA 90 bp | GATCACCTTGGCCTTAAGGAAGGATGGGAAGCGGCTGAAGGCGCGTaGCAAGATGTCATCGTTCACCTCATTGCCCAGATCCCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: DHLGLKEGWEAAEGA*QDVIVHLIAQIPTE Trigger: TTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 90 bp | CAAGAAGCAAGGTCATGTAGGGTTGTGACTGCCAGGGGAAAAGCCTaGCGCTTGTCTCAACAGTCCGTTCATCCCATCAACAGACAGTAC | + |
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Preference number: 5 (lower is better) Translates to: QEARSCRVVTARGKA*RLSQQSVHPINRQY Trigger: GTACTGTCTGTTGATGGGATGAACGGACTGTTGAGACAAGCGCCAGGCTTTTCCCCTGGCAGTCACAACCCTACATGACCTTGCTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS GCA 90 bp | TGCTGTGGTAACTGGGAATTAGGACTGACAGCAGGAGGGTTGGTTTaGAATGATCAGGTTAAAACAAAATTGACATCATCAGAAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: CCGNWELGLTAGGLV*NDQVKTKLTSSERT Trigger: TGTCCTTTCTGATGATGTCAATTTTGTTTTAACCTGATCATTGCAAACCAACCCTCCTGCTGTCAGTCCTAATTCCCAGTTACCACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CCA 72 bp | GGAGCCCAGCGGGGGCCCTGGAGCCCGAGCCATTGGTaGCAGCATCATGGGTGGTCCAGGGGGCCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GAQRGPWSPSHW*QHHGWSRGPRQ Trigger: CTGCCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 72 bp | CATGGAGCCCAGCGGGGGCCCTGGAGCCCGAGCCATTaGTGGCAGCATCATGGGTGGTCCAGGGGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGAQRGPWSPSH*WQHHGWSRGPR Trigger: CCTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCCATG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 72 bp | CCATGGAGCCCAGCGGGGGCCCTGGAGCCCGAGCCATaGGTGGCAGCATCATGGGTGGTCCAGGGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PWSPAGALEPEP*VAASWVVQGAQ Trigger: CTGGGCCCCCTGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCCATGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 72 bp | CTGCTGGCTCTTCCAGAGGGGGCCTCAGTGCAGCCATaGAGCCCAGCGGGGGCCCTGGAGCCCGAGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: LLALPEGASVQP*SPAGALEPEPL Trigger: CAATGGCTCGGGCTCCAGGGCCCCCGCTGGGCTCCATGGCTGCACTGAGGCCCCCTCTGGAAGAGCCAGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS GCA 72 bp | CCGCCTCCATTTCCTTCAAGCGTTCCTCGCCGCTTTTaGCCGGGATGCCAGCGCCAGGACCCGGGACCACGG | + |
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Preference number: 6 (lower is better) Translates to: PPPFPSSVPRRF*PGCQRQDPGPR Trigger: CCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CAA 90 bp | AGGGCCATCTCCGCCTCCATTTCCTTCAAGCGTTCCTCGCCGCTTTaGCCCGGGATGCCAGCGCCAGGACCCGGGACCACGGGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RAISASISFKRSSPL*PGMPAPGPGTTGPP Trigger: AGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGAGATGGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS GCA 72 bp | TTTCCTTCAAGCGTTCCTCGCCGCTTTTGCCCGGGATaGCAGCGCCAGGACCCGGGACCACGGGTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: FPSSVPRRFCPG*QRQDPGPRVLL Trigger: CAGGAGGACCCGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 72 bp | CCGCTGGGACCTGCATCGCTTCTACTGTGGGGACCGTaGGGACAGTGGGCACCGCAGGCACAGCAGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLGPASLLLWGP*GQWAPQAQQLG Trigger: TCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CAA 72 bp | TCCGCCTCCATTTCCTTCAAGCGTTCCTCGCCGCTTTaGCCCGGGATGCCAGCGCCAGGACCCGGGACCACG | + |
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Preference number: 6 (lower is better) Translates to: SASISFKRSSPL*PGMPAPGPGTT Trigger: CGTGGTCCCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAACGCTTGAAGGAAATGGAGGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 72 bp | GGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GCPPQEHGFSSL*AVQVTPITRAK Trigger: TTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588161.5 |
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| CDS GCA 72 bp | CTACTACAGTCTCTGCTTAGCCGCCGCCGCTGGTTCTaGTGTCTACTCTCCCCCTTCGTCCGGGTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLQSLLSRRRWF*CLLSPFVRVGS Trigger: GGAGCCCACCCGGACGAAGGGGGAGAGTAGACAGCAGAACCAGCGGCGGCGGCTAAGCAGAGACTGTAGTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262633.9 ENST00000588161.5 |
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| CDS GCA 72 bp | CGCTGCCGTCGTCGCTGTCGCCGCTACTACAGTCTCTaGTTAGCCGCCGCCGCTGGTTCTGCTGTCTACTCT | + |
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Preference number: 6 (lower is better) Translates to: RCRRRCRRYYSL*LAAAAGSAVYS Trigger: AGAGTAGACAGCAGAACCAGCGGCGGCGGCTAAGCAGAGACTGTAGTAGCGGCGACAGCGACGACGGCAGCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000592202.5 |
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| CDS CCA 72 bp | TCGCCGCTACTACAGTCTCTGCTTAGCCGCCGCCGCTaGTTCTGCTGTCTACTCTCCCCCTTCGTCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPLLQSLLSRRR*FCCLLSPFVRV Trigger: CACCCGGACGAAGGGGGAGAGTAGACAGCAGAACCAGCGGCGGCGGCTAAGCAGAGACTGTAGTAGCGGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262633.9 ENST00000588161.5 |
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| CDS CCA 72 bp | GACCGTGGGGACAGTGGGCACCGCAGGCACAGCAGTTaGGATTCCAGGTACTGGAGCCCCCAGAACTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: DRGDSGHRRHSS*DSRYWSPQNFL Trigger: CAGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 72 bp | AGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SCPPQEHGFSSL*AVQVTPITRAK Trigger: TTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262633.9 |
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| CDS CCA 72 bp | CAGAGGAGAGAGCGGAATCTGCCCGCCGCAGGAACATaGCTTCTCGAGCCTCTGGGCTGTCCAGGTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: QRRERNLPAAGT*LLEPLGCPGDS Trigger: GGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGATTCCGCTCTCTCCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589871.1 |
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| CDS CCA 72 bp | ACCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TCPPQEHGFSSL*AVQVTPITRAK Trigger: TTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CCA 72 bp | GCTGGTTCTGCTGTCTACTCTCCCCCTTCGTCCGGGTaGGCTCCCGAGGATGACGTCCAGCAAAAGCGACGG | + |
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Preference number: 6 (lower is better) Translates to: AGSAVYSPPSSG*APEDDVQQKRR Trigger: CCGTCGCTTTTGCTGGACGTCATCCTCGGGAGCCCACCCGGACGAAGGGGGAGAGTAGACAGCAGAACCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588161.5 |
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| CDS CCA 72 bp | TGCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: CCPPQEHGFSSL*AVQVTPITRAK Trigger: TTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS CAA 72 bp | GGACCGTGGGGACAGTGGGCACCGCAGGCACAGCAGTaGGGATTCCAGGTACTGGAGCCCCCAGAACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GPWGQWAPQAQQ*GFQVLEPPELP Trigger: AGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCCACTGTCCCCACGGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS GCA 72 bp | GCGATAATTGGGCGGATCACAGGAGCCGCTGGGACCTaGATCGCTTCTACTGTGGGGACCGTGGGGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: AIIGRITGAAGT*IASTVGTVGTV Trigger: CACTGTCCCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS GCA 72 bp | CTGCATCCCACTCCAGCAGGCTGGGGTCCTCCCAGCTaGTCCCTGCCGCTGTGCGAATGCACCGTTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: LHPTPAGWGPPS*SLPLCECTVSI Trigger: AATTGAAACGGTGCATTCGCACAGCGGCAGGGAGCAGCTGGGAGGACCCCAGCCTGCTGGAGTGGGATGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 72 bp | GTTGGTCGCGATAATTGGGCGGATCACAGGAGCCGCTaGGACCTGCATCGCTTCTACTGTGGGGACCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VGRDNWADHRSR*DLHRFYCGDRG Trigger: CCCACGGTCCCCACAGTAGAAGCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 72 bp | ATCTGCCCGCCGCAGGAACATGGCTTCTCGAGCCTCTaGGCTGTCCAGGTGACTCCGATCACCAGGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ICPPQEHGFSSL*AVQVTPITRAK Trigger: TTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCTGCGGCGGGCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589871.1 |
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| CDS CAA 90 bp | CGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTaGATGGGGCGCGAGCCCACATACTTCCCTGCATCCCACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTTSRFRSFHMLLRS*MGREPTYFPASHSS Trigger: GCTGGAGTGGGATGCAGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS TCA 72 bp | AGGAACATGGCTTCTCGAGCCTCTGGGCTGTCCAGGTaGCTCCGATCACCAGGGCCAAAGCCAACAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RNMASRASGLSR*LRSPGPKPTGP Trigger: AGGCCCTGTTGGCTTTGGCCCTGGTGATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592526.1 |
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| CDS CCA 72 bp | GGGCACCGCAGGCACAGCAGTTGGGATTCCAGGTACTaGAGCCCCCAGAACTTCCTGCTCAAACAGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GHRRHSSWDSRY*SPQNFLLKQGH Trigger: ATGGCCCTGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGCCTGCGGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS CCA 72 bp | CTGCTGGACCTGCTGGTATGTGTTGGTCGCGATAATTaGGCGGATCACAGGAGCCGCTGGGACCTGCATCGC | + |
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Preference number: 6 (lower is better) Translates to: LLDLLVCVGRDN*ADHRSRWDLHR Trigger: GCGATGCAGGTCCCAGCGGCTCCTGTGATCCGCCCAATTATCGCGACCAACACATACCAGCAGGTCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 ENST00000592526.1 |
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| CDS TCA 72 bp | CCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTTaGTGGGGCGCGAGCCCACATACTTCCCTGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: PDSGPSTCSCEA*WGASPHTSLHP Trigger: GGGATGCAGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS CAA 72 bp | CCCTTGGTCTTGCCTGTGCGCTTGTCACGGATCACCTaGGCCTTAAGGAAGGATGGGAAGCGGCTGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PLVLPVRLSRIT*ALRKDGKRLKA Trigger: CGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGCACAGGCAAGACCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 72 bp | CGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTaGCGAAGCTTGATGGGGCGCGAGCCCACATACTTC | + |
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Preference number: 6 (lower is better) Translates to: RTTSRFRSFHML*RSLMGREPTYF Trigger: GAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 90 bp | TGCTTCTTGCGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTaGCGAAGCTTGATGGGGCGCGAGCCCACATACTTCCCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: CFLRTTSRFRSFHML*RSLMGREPTYFPAS Trigger: GGATGCAGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS CAA 90 bp | GGGAAGCGGCTGAAGGCGCGTGCCAAGATGTCATCGTTCACCTCATaGCCCAGATCCCCACAGAAGATCCGGAAGTCATCTGCATCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GKRLKARAKMSSFTS*PRSPQKIRKSSASH Trigger: GTGGGATGCAGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 90 bp | CGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTaGATGGGGCGCGAGCCCACATACTTCCCATTCATCTCACGCATG | + |
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Preference number: 6 (lower is better) Translates to: RTTSRFRSFHMLLRS*MGREPTYFPFISRM Trigger: CATGCGTGAGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CCA 72 bp | GCGCTTGTCACGGATCACCTTGGCCTTAAGGAAGGATaGGAAGCGGCTGAAGGCGCGTGCCAAGATGTCATC | + |
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Preference number: 6 (lower is better) Translates to: ALVTDHLGLKEG*EAAEGACQDVI Trigger: GATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGATCCGTGACAAGCGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 72 bp | TCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTaGATGGGGCGCGAGCCCACATACTTCCCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SRFRSFHMLLRS*MGREPTYFPAS Trigger: GGATGCAGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589559.5 |
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| CDS CAA 90 bp | TGCTTCTTGCGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTaGCGAAGCTTGATGGGGCGCGAGCCCACATACTTCCCATTCATC | + |
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Preference number: 6 (lower is better) Translates to: CFLRTTSRFRSFHML*RSLMGREPTYFPFI Trigger: GATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS GCA 72 bp | GGCCTTAAGGAAGGATGGGAAGCGGCTGAAGGCGCGTaGCAAGATGTCATCGTTCACCTCATTGCCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: GLKEGWEAAEGA*QDVIVHLIAQI Trigger: GATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS TCA 72 bp | CCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTTaGTGGGGCGCGAGCCCACATACTTCCCATTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PDSGPSTCSCEA*WGASPHTSHSS Trigger: AGATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 72 bp | TCCAGATTCCGGTCCTTCCACATGCTCTTGCGAAGCTaGATGGGGCGCGAGCCCACATACTTCCCATTCATC | + |
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Preference number: 6 (lower is better) Translates to: SRFRSFHMLLRS*MGREPTYFPFI Trigger: GATGAATGGGAAGTATGTGGGCTCGCGCCCCATCAAGCTTCGCAAGAGCATGTGGAAGGACCGGAATCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 90 bp | CACAGACCCTATCTCAGGCCCAGCTTCTTCTTTTCCTTCTGCTTCTaGCGGACCACGTCCAGATTCCGGTCCTTCCACATGCTCTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: HRPYLRPSFFFSFCF*RTTSRFRSFHMLLR Trigger: TCGCAAGAGCATGTGGAAGGACCGGAATCTGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTGGGCCTGAGATAGGGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000262633.9 ENST00000586618.5 ENST00000588161.5 ENST00000589559.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS GCA 72 bp | AAAAGCACTGCTGGCACATCCCAGAAATGTTCGGGCTaGTGGGGATCTCTCCCTGCAAGAAGCAAGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: KSTAGTSQKCSG*WGSLPARSKVM Trigger: CATGACCTTGCTTCTTGCAGGGAGAGATCCCCAGCAGCCCGAACATTTCTGGGATGTGCCAGCAGTGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CCA 72 bp | AGGTCATGTAGGGTTGTGACTGCCAGGGGAAAAGCCTaGCGCTTGTCTCAACAGTCCGTTCATCCCATCAAC | + |
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Preference number: 6 (lower is better) Translates to: RSCRVVTARGKA*RLSQQSVHPIN Trigger: GTTGATGGGATGAACGGACTGTTGAGACAAGCGCCAGGCTTTTCCCCTGGCAGTCACAACCCTACATGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CAA 72 bp | CTGAAGGCGCGTGCCAAGATGTCATCGTTCACCTCATaGCCCAGATCCCCACAGAAGATCCGGAAGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LKARAKMSSFTS*PRSPQKIRKSS Trigger: AGATGACTTCCGGATCTTCTGTGGGGATCTGGGCAATGAGGTGAACGATGACATCTTGGCACGCGCCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000262633.9 ENST00000588161.5 ENST00000589871.1 ENST00000592202.5 |
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| CDS CAA 72 bp | TGTAGGGTTGTGACTGCCAGGGGAAAAGCCTGGCGCTaGTCTCAACAGTCCGTTCATCCCATCAACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: CRVVTARGKAWR*SQQSVHPINRQ Trigger: CTGTCTGTTGATGGGATGAACGGACTGTTGAGACAAGCGCCAGGCTTTTCCCCTGGCAGTCACAACCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CAA 90 bp | GCAAGGTCATGTAGGGTTGTGACTGCCAGGGGAAAAGCCTGGCGCTaGTCTCAACAGTCCGTTCATCCCATCAACAGACAGTACATAATG | + |
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Preference number: 6 (lower is better) Translates to: ARSCRVVTARGKAWR*SQQSVHPINRQYIM Trigger: CATTATGTACTGTCTGTTGATGGGATGAACGGACTGTTGAGACAAGCGCCAGGCTTTTCCCCTGGCAGTCACAACCCTACATGACCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CCA 72 bp | CATCCCATCAACAGACAGTACATAATGCTTCCTATGTaGCAGATACTGAGACTTCTGCCCCTCATGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: HPINRQYIMLPM*QILRLLPLMEL Trigger: AAGCTCCATGAGGGGCAGAAGTCTCAGTATCTGCCACATAGGAAGCATTATGTACTGTCTGTTGATGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CAA 72 bp | TGTGGTAACTGGGAATTAGGACTGACAGCAGGAGGGTaGGTTTGCAATGATCAGGTTAAAACAAAATTGACA | + |
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Preference number: 6 (lower is better) Translates to: CGNWELGLTAGG*VCNDQVKTKLT Trigger: TGTCAATTTTGTTTTAACCTGATCATTGCAAACCAACCCTCCTGCTGTCAGTCCTAATTCCCAGTTACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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| CDS CAA 90 bp | GTTAAGTGCTGTGGTAACTGGGAATTAGGACTGACAGCAGGAGGGTaGGTTTGCAATGATCAGGTTAAAACAAAATTGACATCATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VKCCGNWELGLTAGG*VCNDQVKTKLTSSE Trigger: TTCTGATGATGTCAATTTTGTTTTAACCTGATCATTGCAAACCAACCCTCCTGCTGTCAGTCCTAATTCCCAGTTACCACAGCACTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592526.1 |
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