RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM41 (Homo sapiens)

Ensembl gene IDs: ENSG00000089682

Ensembl transcript IDs: ENST00000372479.7, ENST00000372487.5, ENST00000434854.1, ENST00000471079.1, ENST00000474499.1, ENST00000475556.1, ENST00000485676.5, ENST00000495517.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTTCACGTTCTCTCCATTTGTTCCTGTGGATTTGTCTTACCATCTaGAGTCAGTTCTTTAGTACAAGACAGTTTTGCTTCCACTCAGCT +
Preference number: 1 (lower is better)
Translates to: ISRSLHLFLWICLTI*SQFFSTRQFCFHSA
Trigger: AGCTGAGTGGAAGCAAAACTGTCTTGTACTAAAGAACTGACTCCAGATGGTAAGACAAATCCACAGGAACAAATGGAGAGAACGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR GCA 90 bp CCTGTAGCACATGATATGAGAGAAGTCGCTTGGAGATTTGACCGTTaGTTTTTGTTCTTTCCAAACTCTATCACCAATATTTTCCCATGT +
Preference number: 1 (lower is better)
Translates to: PVAHDMREVAWRFDR*FLFFPNSITNIFPC
Trigger: ACATGGGAAAATATTGGTGATAGAGTTTGGAAAGAACAAAAAGCAACGGTCAAATCTCCAAGCGACTTCTCTCATATCATGTGCTACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR CCA 90 bp TTGTTGATGCTTAGGCCTGGGGGTCCTACTCTTTTATTTACTAGGTaGATGAAATATGGCAAATGGGCTCTAGTAAAGAAATATTTCAAC +
Preference number: 1 (lower is better)
Translates to: LLMLRPGGPTLLFTR*MKYGKWALVKKYFN
Trigger: GTTGAAATATTTCTTTACTAGAGCCCATTTGCCATATTTCATCCACCTAGTAAATAAAAGAGTAGGACCCCCAGGCCTAAGCATCAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR CCA 90 bp TTTCCCCTCCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTaGTGTCTATACATAAATCCTAGATCCAAGATTCCAATTCAAGAA +
Preference number: 1 (lower is better)
Translates to: FPLPQLVFPLQLQTN*CLYINPRSKIPIQE
Trigger: TTCTTGAATTGGAATCTTGGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGGAGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
3UTR GCA 90 bp TCTATCACCAATATTTTCCCATGTAGTTTGTATCCATTTACTAGATaGAATGCTTGCCATGCTATCTCCTTATTGGGAAAGGTGATAAAA +
Preference number: 1 (lower is better)
Translates to: SITNIFPCSLYPFTR*NACHAISLLGKVIK
Trigger: TTTTATCACCTTTCCCAATAAGGAGATAGCATGGCAAGCATTGCATCTAGTAAATGGATACAAACTACATGGGAAAATATTGGTGATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR CCA 90 bp ATATTAAACTTATTTCCTATTTCACGTTCTCTCCATTTGTTCCTGTaGATTTGTCTTACCATCTGGAGTCAGTTCTTTAGTACAAGACAG +
Preference number: 1 (lower is better)
Translates to: ILNLFPISRSLHLFL*ICLTIWSQFFSTRQ
Trigger: CTGTCTTGTACTAAAGAACTGACTCCAGATGGTAAGACAAATCCACAGGAACAAATGGAGAGAACGTGAAATAGGAAATAAGTTTAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CCA 90 bp TTACCTTTAATCTCTTTCTATCTTCTAAAGTGTGTCTCAAATAGATaGCATGAAGTGGAATCAGACTTGTTTCTGACATCTCTGCCTTTT +
Preference number: 1 (lower is better)
Translates to: LPLISFYLLKCVSNR*HEVESDLFLTSLPF
Trigger: AAAAGGCAGAGATGTCAGAAACAAGTCTGATTCCACTTCATGCCATCTATTTGAGACACACTTTAGAAGATAGAAAGAGATTAAAGGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR TCA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGCCTCCCAGGCTCAAGTaGTTCTCATGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRPPRLK*FSCLSL
Trigger: GAGGCTGAGGCATGAGAATCACTTGAGCCTGGGAGG...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR TCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGACTCCCAAACTCAGGTaGTCCACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQTPKLR*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACCTGAGTTTGGGAGT...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR TCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCGTTGTTACATCTTCCTaGTGTATTGACCCTTTTATC +
Preference number: 2 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCVVTSS*CIDPFI
Trigger: GATAAAAGGGTCAATACATCAGGAAGATGTAACAAC...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCAAGTCTTCTATTTCCTaGTTTATCTTCTGTCTAGGT +
Preference number: 2 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCKSSIS*FIFCLG
Trigger: ACCTAGACAGAAGATAAACCAGGAAATAGAAGACTT...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAGCCTCCCGAGTAGCTaGGATTACAGTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: CTLPFILSISSVLYSLQLSLPSS*DYSHVP
Trigger: TGGCACATGACTGTAATCCCAGCTACTCGGGAGGCT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCGAACCGAGCGAACAATaGCACAAGATCTCTTTCAGT +
Preference number: 2 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSEPSEQ*HKISFS
Trigger: ACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTC...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR CCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTGTGTCTCAAATAGATaGCATGAAGTGGAATCAGAC +
Preference number: 2 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHCVSNR*HEVESD
Trigger: GTCTGATTCCACTTCATGCCATCTATTTGAGACACA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGCTCCATTTGTTCCTGTaGATTTGTCTTACCATCTGG +
Preference number: 2 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRLHLFL*ICLTIW
Trigger: CCAGATGGTAAGACAAATCCACAGGAACAAATGGAG...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CAA 90 bp CTTCTAAAGTGTGTCTCAAATAGATGGCATGAAGTGGAATCAGACTaGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGC +
Preference number: 2 (lower is better)
Translates to: LLKCVSNRWHEVESD*FLTSLPFIVLLNPC
Trigger: GCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGATTCCACTTCATGCCATCTATTTGAGACACACTTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR TCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAGTCGCTTGGAGATTTaGCCGTTGCTTTTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: CTLPFILSISSVLYSLQLSRLEI*PLLFVL
Trigger: AAGAACAAAAAGCAACGGTCAAATCTCCAAGCGACT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTGGAGATGTTTCATATaGACTCGAGAAGAATATGTA +
Preference number: 2 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHWRCFI*TREEYV
Trigger: TACATATTCTTCTCGAGTGCATATGAAACATCTCCA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGCAACTCCAAACAAACTaGTGTCTATACATAAATCCT +
Preference number: 2 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQQLQTN*CLYINP
Trigger: AGGATTTATGTATAGACACCAGTTTGTTTGGAGTTG...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR TCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTTGGCTGTTGTCTGTGTaGTATATTTGTTTTCCATCC +
Preference number: 2 (lower is better)
Translates to: ILEMFHMHSRRICILMLGWLLSV*YICFPS
Trigger: GGATGGAAAACAAATATATCACACAGACAACAGCCA...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CAA 90 bp TTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTaGGGTGGAAAGTTCTATAGATGTCTTTTAGGTCAATTTGCCTTA +
Preference number: 2 (lower is better)
Translates to: LEMFHMHSRRICILM*GGKFYRCLLGQFAL
Trigger: TAAGGCAAATTGACCTAAAAGACATCTATAGAACTTTCCACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATATCCATTTACTAGATaGAATGCTTGCCATGCTATC +
Preference number: 2 (lower is better)
Translates to: CTLPFILSISSVLYSLQLYPFTR*NACHAI
Trigger: GATAGCATGGCAAGCATTGCATCTAGTAAATGGATA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATGGAGATTTGACCGTTaGTTTTTGTTCTTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: CTLPFILSISSVLYSLQLWRFDR*FLFFPN
Trigger: GTTTGGAAAGAACAAAAAGCAACGGTCAAATCTCCA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAACAACTCCAAACAAACTaGTGTCTATACATAAATCCT +
Preference number: 2 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKQLQTN*CLYINP
Trigger: AGGATTTATGTATAGACACCAGTTTGTTTGGAGTTG...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
3UTR-3UTR CCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGATTTGTCTTACCATCTaGAGTCAGTTCTTTAGTACA +
Preference number: 2 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRICLTI*SQFFST
Trigger: TGTACTAAAGAACTGACTCCAGATGGTAAGACAAAT...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGCCATCCCCCGCTTTGTaGTATTATTGTTATATATGT +
Preference number: 2 (lower is better)
Translates to: LFKSSISWFIFCLGALLLPSPAL*YYCYIC
Trigger: ACATATATAACAATAATACCACAAAGCGGGGGATGG...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCTTTGTTCCTGTGGATTaGTCTTACCATCTGGAGTCA +
Preference number: 3 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCFVPVD*SYHLES
Trigger: TGACTCCAGATGGTAAGACAAATCCACAGGAACAAA...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCTTTGCTTCATGTATTTaGGGCTCTACTGTTAGATGC +
Preference number: 3 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCFASCI*GSTVRC
Trigger: GCATCTAACAGTAGAGCCCAAAATACATGAAGCAAA...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCCTTTCCTTTCAGTTTTaGCTTCATGTATTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCLSFQF*LHVFWA
Trigger: AGCCCAAAATACATGAAGCAAAAACTGAAAGGAAAG...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR TCA 72 bp CAAGGTCATAGAATGTTAAGTGTGGCTGTACAGGTCTaGCTCCAGTTTGTACTACTTCCTCTCTGTATATTG +
Preference number: 3 (lower is better)
Translates to: QGHRMLSVAVQV*LQFVLLPLCIL
Trigger: CAATATACAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATTCTATGACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR CAA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGTCCGTTTGGCATTCTTaGCTTGTATGTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQSVWHS*LVCSSS
Trigger: AGAAGAGGAACATACAAGCAAAGAATGCCAAACGGA...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR-3UTR CAA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTATGCCTCAAGCTTTTaGCTTCTCCATTCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHYASSF*LLHSFF
Trigger: AAAGAAGGAATGGAGAAGCAAAAAGCTTGAGGCATA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTGCCTTTTATAGTATaGCTTAATCCATGCACATTG +
Preference number: 3 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSLPFIV*LNPCTL
Trigger: CAATGTGCATGGATTAAGCAATACTATAAAAGGCAG...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGGAAGTGGAATCAGACTaGTTTCTGACATCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: MWSEGMLCMISVYLYLLREVESD*FLTSLP
Trigger: AGGCAGAGATGTCAGAAACAAGTCTGATTCCACTTC...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CCA 72 bp TCTCTCCATTTGTTCCTGTGGATTTGTCTTACCATCTaGAGTCAGTTCTTTAGTACAAGACAGTTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: SLHLFLWICLTI*SQFFSTRQFCF
Trigger: GAAGCAAAACTGTCTTGTACTAAAGAACTGACTCCAGATGGTAAGACAAATCCACAGGAACAAATGGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR-3UTR CAA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGTCACGTTCTCTCCATTaGTTCCTGTGGATTTGTCTT +
Preference number: 3 (lower is better)
Translates to: LFKSSISWFIFCLGALLLSRSLH*FLWICL
Trigger: AAGACAAATCCACAGGAACAAATGGAGAGAACGTGA...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CCA 72 bp CCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTaGTGTCTATACATAAATCCTAGATCCAAGATTCCA +
Preference number: 3 (lower is better)
Translates to: PQLVFPLQLQTN*CLYINPRSKIP
Trigger: TGGAATCTTGGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
3UTR GCA 72 bp AATATTTTCCCATGTAGTTTGTATCCATTTACTAGATaGAATGCTTGCCATGCTATCTCCTTATTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: NIFPCSLYPFTR*NACHAISLLGK
Trigger: CTTTCCCAATAAGGAGATAGCATGGCAAGCATTGCATCTAGTAAATGGATACAAACTACATGGGAAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCVAGKE*ADAPRS
Trigger: GGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCAC...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCTCAGGCGTGAGCTACTaGACCCAGCCAGTCACTTAC +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCSGVSY*TQPVTY
Trigger: GTAAGTGACTGGCTGGGTGCAGTAGCTCACGCCTGA...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGCCTCCCAGGCTCAAGTaGTTCTCATGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEPPRLK*FSCLSL
Trigger: GAGGCTGAGGCATGAGAATCACTTGAGCCTGGGAGG...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCAGCTCCTCCAGGACATaGTCATCACTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCSSSRT*SSLFTQ
Trigger: CTGTGTGAAGAGTGATGAGCATGTCCTGGAGGAGCT...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEVAGKE*ADAPRS
Trigger: GGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCAC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR TCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGACTCCCAAACTCAGGTaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLTPKLR*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACCTGAGTTTGGGAGT...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGSHSPS*FLPKGL
Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACT...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTCCCAGTCCTTTTCTaGCATTTGGCTCCTAGAACG +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGLPVLF*HLAPRT
Trigger: CGTTCTAGGAGCCAAATGGCAGAAAAGGACTGGGAG...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGCAGTGGCGCAATCTCTaGTCACTGCAACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEQWRNL*SLQPWP
Trigger: AGGCCAAGGTTGCAGTGAGCAGAGATTGCGCCACTG...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGAAGGTGATAAAAGCCTaGCCCCTCATTCGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGKVIKA*PLIRPV
Trigger: GACTGGACGAATGAGGGGCCAGGCTTTTATCACCTT...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGGCTACCTGTAGCACATaGTATGAGAGAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGATCST*YERSRL
Trigger: CAAGCGACTTCTCTCATATCATGTGCTACAGGTAGC...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGCAACTGGGGGATTTGTaGCTGGCATCCTCTTTTCTA +
Preference number: 4 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRQLGDL*LASSFL
Trigger: TAGAAAAGAGGATGCCAGTCACAAATCCCCCAGTTG...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGAAGACGGTTCTGTATTaGTTCAGGAGTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRKTVLY*FRSCPQ
Trigger: CTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTT...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGQLFAL*KSLWQA
Trigger: TGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTG...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRQLFAL*KSLWQA
Trigger: TGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTG...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGAGAGAAGCAGTTTCCTaGTCCTTCTCATGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRREAVS*SFSCSV
Trigger: GACACTGCATGAGAAGGACCAGGAAACTGCTTCTCT...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTTTGCAAATCTCTGTaGCAGGCAAAGAATGCGCTG +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGLCKSL*QAKNAL
Trigger: CAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAG...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR TCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGGAACCGAGCGAACAATaGCACAAGATCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGEPSEQ*HKISFS
Trigger: ACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTC...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTCCTGGTCCTTCTCATaGAGTGTCTGGAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPESWSFS*SVWNWD
Trigger: GTCCCAATTCCAGACACTGCATGAGAAGGACCAGGA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGCCGGGTCAGCTGTTTaGTCTTTGCAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEAGSAV*SLQISV
Trigger: CACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAAGCTCCTCCAGGACATaGTCATCACTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRSSSRT*SSLFTQ
Trigger: CTGTGTGAAGAGTGATGAGCATGTCCTGGAGGAGCT...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGAAGACGGTTCTGTATTaGTTCAGGAGTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEKTVLY*FRSCPQ
Trigger: CTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTT...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQVAGKE*ADAPRS
Trigger: GGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCAC...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGCCGGGTCAGCTGTTTaGTCTTTGCAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRAGSAV*SLQISV
Trigger: CACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGC...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGAGAGAAGCAGTTTCCTaGTCCTTCTCATGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEREAVS*SFSCSV
Trigger: GACACTGCATGAGAAGGACCAGGAAACTGCTTCTCT...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTTGCCACATGGAGACTaGGGCCTTTACCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSLPHGD*GLYPVL
Trigger: CAGCACAGGGTAAAGGCCCCAGTCTCCATGTGGCAA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCCTGGATTTCATCTTCTaGGACAAATTCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCLDFIF*DKFYWL
Trigger: CAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAG...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCGACAAACGATTTCTCTaGATTTCATCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCDKRFL*ISSSGT
Trigger: TGTCCCAGAAGATGAAATCCAGAGAAATCGTTTGTC...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGCCCCTACCTCCAACTTaGGTAAATAGGCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQPLPPT*VNRPRT
Trigger: GGTCCGCGGCCTATTTACCCAAGTTGGAGGTAGGGG...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCTCACCTCTCATAAGTTaGAACTCTTCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCSPLIS*NSSRRF
Trigger: AAAACGTCTTGAAGAGTTTCAACTTATGAGAGGTGA...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGAACCGAGCGAACAATaGCACAAGATCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEEPSEQ*HKISFS
Trigger: ACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTAGGAGGCTTTTCAGCTaGCTCTCCCCTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSRRLFS*LSPSVS
Trigger: GGAAACAGAAGGGGAGAGGCAGCTGAAAAGCCTCCT...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGTTCTCATGCAGTGTCTaGAATTGGGACAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGFSCSV*NWDKVI
Trigger: TATGACTTTGTCCCAATTCCAGACACTGCATGAGAA...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGACTTTGCAAATCTCTGTaGCAGGCAAAGAATGCGCTG +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRLCKSL*QAKNAL
Trigger: CAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAG...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGTTTCCAGGTTGTTCATaGGATCACCTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGFPGCS*DHLCSS
Trigger: AGAAGAACAAAGGTGATCCCATGAACAACCTGGAAA...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCCCATCCCCCGCTTTGTaGTATTATTGTTATATATGT +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCPSPAL*YYCYIC
Trigger: ACATATATAACAATAATACCACAAAGCGGGGGATGG...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTTTCTTCAATATCTTaGAGACGGTTCTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGLSSIS*RRFCIA
Trigger: AGCAATACAGAACCGTCTTCAAGATATTGAAGAAAG...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR TCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGAGTCGCTTGGAGATTTaGCCGTTGCTTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPESRLEI*PLLFVL
Trigger: AAGAACAAAAAGCAACGGTCAAATCTCCAAGCGACT...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTATCTTCCTCTTCATTaGGGTCATGTACTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEYLPLH*GHVLVC
Trigger: GCAGACAAGTACATGACCTCAATGAAGAGGAAGATA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR TCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGCTTAATAGCATTTGTTaGTGCTTAGGCCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLLNSIC*CLGLGV
Trigger: GACCCCCAGGCCTAAGCATCAACAAATGCTATTAAG...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATATGGGCTCTCAGCTGTaGCACTATCACCCACTGATG +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHMGSQL*HYHPLM
Trigger: CATCAGTGGGTGATAGTGGCACAGCTGAGAGCCCAT...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCACATACATTCCTCAATaGAGACAGAAGTATCAAGTT +
Preference number: 4 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCTYIPQ*RQKYQV
Trigger: AACTTGATACTTCTGTCTCCATTGAGGAATGTATGT...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGAGCCTCCCGAGTAGCTaGGATTACAGTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQSLPSS*DYSHVP
Trigger: TGGCACATGACTGTAATCCCAGCTACTCGGGAGGCT...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACATGCCCAGGCTGGTCTTaGATTCCTGGTCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTCPGWS*IPGLKG
Trigger: TCCCTTGAGACCAGGAATTCAAGACCAGCCTGGGCA...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTATTTACTAGGTGGATaGAATATGGCAAATGGGCTC +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEYLLGG*NMANGL
Trigger: GAGCCCATTTGCCATATTTCATCCACCTAGTAAATA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTCCTGGTCCTTCTCATaGAGTGTCTGGAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHSWSFS*SVWNWD
Trigger: GTCCCAATTCCAGACACTGCATGAGAAGGACCAGGA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTATTGCTTCAGGAGTTaGCCTCAGTTTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEYCFRS*PQFCLL
Trigger: AAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLVAGKE*ADAPRS
Trigger: GGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCAC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGCCGGGTCAGCTGTTTaGTCTTTGCAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHAGSAV*SLQISV
Trigger: CACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGC...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSGAFTL*CLFSLV
Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAGGGGCCTTTACCCTGTaGTGCCTGTTTTCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTGAFTL*CLFSLV
Trigger: GACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCC...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGCAATCTCTGCTCACTaGAACCTTGGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLAISAH*NLGLPG
Trigger: GCCTGGGAGGCCAAGGTTGCAGTGAGCAGAGATTGC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGACATACATTCCTCAATaGAGACAGAAGTATCAAGTT +
Preference number: 4 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGTYIPQ*RQKYQV
Trigger: AACTTGATACTTCTGTCTCCATTGAGGAATGTATGT...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTTCTCATGCAGTGTCTaGAATTGGGACAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEFSCSV*NWDKVI
Trigger: TATGACTTTGTCCCAATTCCAGACACTGCATGAGAA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTGCCACATGGAGACTaGGGCCTTTACCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKLPHGD*GLYPVL
Trigger: CAGCACAGGGTAAAGGCCCCAGTCTCCATGTGGCAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAATGAGAGAAGTCGCTTaGAGATTTGACCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRMREVA*RFDRCF
Trigger: AAAGCAACGGTCAAATCTCCAAGCGACTTCTCTCAT...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCAGGCAAAGAATGCGCTaGCGCTCCGAGATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSRQRMR*RSEILS
Trigger: AGAAAGGATCTCGGAGCGTCAGCGCATTCTTTGCCT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR TCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGAATGCCATACATGGCTaGAGATGTGAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLNAIHG*RCEHCF
Trigger: GAAACAGTGTTCACATCTTCAGCCATGTATGGCATT...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCAGGAGGCTTTTCAGCTaGCTCTCCCCTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSRRLFS*LSPSVS
Trigger: GGAAACAGAAGGGGAGAGGCAGCTGAAAAGCCTCCT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHQLFAL*KSLWQA
Trigger: TGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTG...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCATGGGCTCTCAGCTGTaGCACTATCACCCACTGATG +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSMGSQL*HYHPLM
Trigger: CATCAGTGGGTGATAGTGGCACAGCTGAGAGCCCAT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKAFTLC*LFSLVL
Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAGCCTTTACCCTGTGCTaGCTGTTTTCCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTAFTLC*LFSLVL
Trigger: CAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGC...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSTNSIG*VSFLGP
Trigger: TGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGT...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGTCATGTACTTGTCTaGACTTGTCTTTTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRGHVLV*TCLFVV
Trigger: TACCACAAAAAGACAAGTGCAGACAAGTACATGACC...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGCTGAGACCAGTGAGTaGGAAGCAAAGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKAETSE*EAKGSP
Trigger: AGGTGAACCCTTTGCTTCCCACTCACTGGTCTCAGC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTGTTTTCCCTTGTCCTaGAGTAATGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSCFPLS*SNDGLS
Trigger: TGAGAGCCCATCATTACTCCAGGACAAGGGAAAACA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATATAACATTTGCCACATaGAGACTGGGGCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHITFAT*RLGPLP
Trigger: GGGTAAAGGCCCCAGTCTCCATGTGGCAAATGTTAT...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSHSPS*FLPKGL
Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTCCTGGTCCTTCTCATaGAGTGTCTGGAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSWSFS*SVWNWD
Trigger: GTCCCAATTCCAGACACTGCATGAGAAGGACCAGGA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTGGTCCTTCTCATaGAGTGTCTGGAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKSWSFS*SVWNWD
Trigger: GTCCCAATTCCAGACACTGCATGAGAAGGACCAGGA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGTATTGCTTCAGGAGTTaGCCTCAGTTTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLYCFRS*PQFCLL
Trigger: AAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATA...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGCCGGGTCAGCTGTTTaGTCTTTGCAAATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKAGSAV*SLQISV
Trigger: CACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTGTCTTTTTGTGGTATaGTTGGTAATAAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSPGTERTMTQDLFQSPECLFVV*LVIKSL
Trigger: AAGGCTCTTTATTACCAAGCATACCACAAAAAGACA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR GCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGGGTCATGTACTTGTCTaGACTTGTCTTTTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLGHVLV*TCLFVV
Trigger: TACCACAAAAAGACAAGTGCAGACAAGTACATGACC...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGATTTTCACCAGAAACATaGCTCTTCCAGATCAAGATT +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRFSPET*LFQIKI
Trigger: AATCTTGATCTGGAAGAGCCATGTTTCTGGTGAAAA...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGGCTGAGACCAGTGAGTaGGAAGCAAAGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLAETSE*EAKGSP
Trigger: AGGTGAACCCTTTGCTTCCCACTCACTGGTCTCAGC...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGATTCTGTTCTTCAGCCTaGATAATATCTCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRFCSSA*IISQFI
Trigger: GATGAACTGAGATATTATCCAGGCTGAAGAACAGAA...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTGGCTGTTGTCTGTGTaGTATATTTGTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSWLLSV*YICFPS
Trigger: GGATGGAAAACAAATATATCACACAGACAACAGCCA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAGCTCCTCCAGGACATaGTCATCACTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLSSSRT*SSLFTQ
Trigger: CTGTGTGAAGAGTGATGAGCATGTCCTGGAGGAGCT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLSHSPS*FLPKGL
Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACT...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLSHSPS*FLPKGL
Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAAAGACGGTTCTGTATTaGTTCAGGAGTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKKTVLY*FRSCPQ
Trigger: CTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTT...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSQLFAL*KSLWQA
Trigger: TGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATAAAATCAATAACATTTaGCACATGGAGACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHKINNI*HMETGA
Trigger: GGCCCCAGTCTCCATGTGGCAAATGTTATTGATTTT...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGATGTCTTTTTGTGGTATaGTTGGTAATAAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRCLFVV*LVIKSL
Trigger: AAGGCTCTTTATTACCAAGCATACCACAAAAAGACA...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCTTTGCAAATCTCTGTaGCAGGCAAAGAATGCGCTG +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSLCKSL*QAKNAL
Trigger: CAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCATAACATTTGCCACATaGAGACTGGGGCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSITFAT*RLGPLP
Trigger: GGGTAAAGGCCCCAGTCTCCATGTGGCAAATGTTAT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAAGGTGATAAAAGCCTaGCCCCTCATTCGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLKVIKA*PLIRPV
Trigger: GACTGGACGAATGAGGGGCCAGGCTTTTATCACCTT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGAAGGTGATAAAAGCCTaGCCCCTCATTCGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLKVIKA*PLIRPV
Trigger: GACTGGACGAATGAGGGGCCAGGCTTTTATCACCTT...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATCTCCATTTGTTCCTGTaGATTTGTCTTACCATCTGG +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHLHLFL*ICLTIW
Trigger: CCAGATGGTAAGACAAATCCACAGGAACAAATGGAG...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTGTGTCTCAAATAGATaGCATGAAGTGGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSCVSNR*HEVESD
Trigger: GTCTGATTCCACTTCATGCCATCTATTTGAGACACA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACACTGGTCTTGAATTCCTaGTCTCAAGGGATCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTLVLNS*SQGIQG
Trigger: TCCTTGGATCCCTTGAGACCAGGAATTCAAGACCAG...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTCGGATCTCTTCCTCTaGCAAACGATTTCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSDLFL*QTISLD
Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAAGAGATCCGA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR TCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACATCGGATCTCTTCCTCTaGCAAACGATTTCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTSDLFL*QTISLD
Trigger: ATCCAGAGAAATCGTTTGTCAGAGGAAGAGATCCGA...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGCTACCTGTAGCACATaGTATGAGAGAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLATCST*YERSRL
Trigger: CAAGCGACTTCTCTCATATCATGTGCTACAGGTAGC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR TCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGTCAACCTGTAGCACATaGTATGAGAGAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRSTCST*YERSRL
Trigger: CAAGCGACTTCTCTCATATCATGTGCTACAGGTTGA...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTAGGGCATGCTTTGCATaGTTTCAGTCTACTTATATT +
Preference number: 4 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSRACFA*FQSTYI
Trigger: AATATAAGTAGACTGAAATCATGCAAAGCATGCCCT...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTAAGACGGTTCTGTATTaGTTCAGGAGTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGKTVLY*FRSCPQ
Trigger: CTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTT...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGGCCCAGTCCAACACTaGTCAGGTGAAAAATCAATA +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKGPVQH*SGEKSI
Trigger: TATTGATTTTTCACCTGAGCAGTGTTGGACTGGGCC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAGGCCCAGTCCAACACTaGTCAGGTGAAAAATCAATA +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTGPVQH*SGEKSI
Trigger: TATTGATTTTTCACCTGAGCAGTGTTGGACTGGGCC...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSTNSIG*VSFLGP
Trigger: TGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGACTAGATGCAATGCTTaGCATGCTATCTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQTRCNA*HAISLL
Trigger: CAATAAGGAGATAGCATGGCAAGCATTGCATCTAGT...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTGCAGTGTCTGGAATTaGGACAAAGTCATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSCSVWN*DKVIVP
Trigger: TGGGACTATGACTTTGTCCCAATTCCAGACACTGCA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTTCTCATGCAGTGTCTaGAATTGGGACAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHFSCSV*NWDKVI
Trigger: TATGACTTTGTCCCAATTCCAGACACTGCATGAGAA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAGAGAAGCAGTTTCCTaGTCCTTCTCATGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLREAVS*SFSCSV
Trigger: GACACTGCATGAGAAGGACCAGGAAACTGCTTCTCT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTAGAGAAGCAGTTTCCTaGTCCTTCTCATGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGREAVS*SFSCSV
Trigger: GACACTGCATGAGAAGGACCAGGAAACTGCTTCTCT...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTCTTTGCAAATCTCTGTaGCAGGCAAAGAATGCGCTG +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGLCKSL*QAKNAL
Trigger: CAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAG...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTGTTTTCCCTTGTCCTaGAGTAATGATGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSCFPLS*SNDGLS
Trigger: TGAGAGCCCATCATTACTCCAGGACAAGGGAAAACA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATGGGACAAATTCTATTaGCTGCGTCAGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKWDKFY*LRQLLR
Trigger: CCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGTGGGACAAATTCTATTaGCTGCGTCAGCTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRWDKFY*LRQLLR
Trigger: CCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCA...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGCAACTCCAAACAAACTaGTGTCTATACATAAATCCT +
Preference number: 4 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLQLQTN*CLYINP
Trigger: AGGATTTATGTATAGACACCAGTTTGTTTGGAGTTG...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGCTTTCTTCAATATCTTaGAGACGGTTCTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQLSSIS*RRFCIA
Trigger: AGCAATACAGAACCGTCTTCAAGATATTGAAGAAAG...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGGAACCGAGCGAACAATaGCACAAGATCTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLEPSEQ*HKISFS
Trigger: ACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTC...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCAGTCGCTTGGAGATTTaGCCGTTGCTTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSRLEI*PLLFVL
Trigger: AAGAACAAAAAGCAACGGTCAAATCTCCAAGCGACT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR TCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGAGTCGCTTGGAGATTTaGCCGTTGCTTTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRSRLEI*PLLFVL
Trigger: AAGAACAAAAAGCAACGGTCAAATCTCCAAGCGACT...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGAGTCCTCTCATAAGTTaGAACTCTTCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQSPLIS*NSSRRF
Trigger: AAAACGTCTTGAAGAGTTTCAACTTATGAGAGGACT...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCACATGGCTGAAGATGTaGACACTGTTTCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSTWLKM*TLFLKA
Trigger: TGCTTTCAGAAACAGTGTTCACATCTTCAGCCATGT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR TCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGAGGCTCAGATTAAGTaGCTTGCCAAGGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLEAQIK*LAKVIE
Trigger: TTCTATGACCTTGGCAAGTCACTTAATCTGAGCCTC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGTATCCATTTACTAGATaGAATGCTTGCCATGCTATC +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQYPFTR*NACHAI
Trigger: GATAGCATGGCAAGCATTGCATCTAGTAAATGGATA...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTGGAGATTTGACCGTTaGTTTTTGTTCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHWRFDR*FLFFPN
Trigger: GTTTGGAAAGAACAAAAAGCAACGGTCAAATCTCCA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGTGGAGATTTGACCGTTaGTTTTTGTTCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQWRFDR*FLFFPN
Trigger: GTTTGGAAAGAACAAAAAGCAACGGTCAAATCTCCA...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGTGCAGTGTCTGGAATTaGGACAAAGTCATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLCSVWN*DKVIVP
Trigger: TGGGACTATGACTTTGTCCCAATTCCAGACACTGCA...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCATGAGAGAAGTCGCTTaGAGATTTGACCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSMREVA*RFDRCF
Trigger: AAAGCAACGGTCAAATCTCCAAGCGACTTCTCTCAT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCCAACACTGCTCAGGTaGAAAATCAATAACATTTGC +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSPTLLR*KINNIC
Trigger: GCAAATGTTATTGATTTTTCACCTGAGCAGTGTTGG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR TCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACACCAACACTGCTCAGGTaGAAAATCAATAACATTTGC +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTPTLLR*KINNIC
Trigger: GCAAATGTTATTGATTTTTCACCTGAGCAGTGTTGG...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATATCTTCCTCTTCATTaGGGTCATGTACTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLYLPLH*GHVLVC
Trigger: GCAGACAAGTACATGACCTCAATGAAGAGGAAGATA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATATTGCTTCAGGAGTTaGCCTCAGTTTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKYCFRS*PQFCLL
Trigger: AAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAAAAATCAATAACATTTaGCACATGGAGACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLKINNI*HMETGA
Trigger: GGCCCCAGTCTCCATGTGGCAAATGTTATTGATTTT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAACTAGATGCAATGCTTaGCATGCTATCTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKTRCNA*HAISLL
Trigger: CAATAAGGAGATAGCATGGCAAGCATTGCATCTAGT...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAACTAGATGCAATGCTTaGCATGCTATCTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTTRCNA*HAISLL
Trigger: CAATAAGGAGATAGCATGGCAAGCATTGCATCTAGT...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTATCTTCTGTCTAGGTaGTCTATTATTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHYLLSR*SIIEKG
Trigger: CCCTTTTTCAATAATAGAGCACCTAGACAGAAGATA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTCTCATGCAGTGTCTaGAATTGGGACAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKFSCSV*NWDKVI
Trigger: TATGACTTTGTCCCAATTCCAGACACTGCATGAGAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTTCCAGGTTGTTCATaGGATCACCTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKFPGCS*DHLCSS
Trigger: AGAAGAACAAAGGTGATCCCATGAACAACCTGGAAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp ATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTACTTATATTTATTAAGGTTTCCAGGTTGTTCATaGGATCACCTTTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MWSEGMLCMISVYLYLLRFPGCS*DHLCSS
Trigger: AGAAGAACAAAGGTGATCCCATGAACAACCTGGAAA...CCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCTGGATTTCATCTTCTaGGACAAATTCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSLDFIF*DKFYWL
Trigger: CAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGACAAACGATTTCTCTaGATTTCATCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKDKRFL*ISSSGT
Trigger: TGTCCCAGAAGATGAAATCCAGAGAAATCGTTTGTC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTATGAGAGAAGTCGCTTaGAGATTTGACCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGMREVA*RFDRCF
Trigger: AAAGCAACGGTCAAATCTCCAAGCGACTTCTCTCAT...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CAA 72 bp TTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTaGCATGATTTCAGTCTACTTATATTTATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FLTSSHVVRGHA*HDFSLLIFIKA
Trigger: AGCCTTAATAAATATAAGTAGACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAACTTTCTTCAATATCTTaGAGACGGTTCTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKLSSIS*RRFCIA
Trigger: AGCAATACAGAACCGTCTTCAAGATATTGAAGAAAG...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR TCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACACTTTCTTCAATATCTTaGAGACGGTTCTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTLSSIS*RRFCIA
Trigger: AGCAATACAGAACCGTCTTCAAGATATTGAAGAAAG...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTCACCTCTCATAAGTTaGAACTCTTCAAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSPLIS*NSSRRF
Trigger: AAAACGTCTTGAAGAGTTTCAACTTATGAGAGGTGA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR TCA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCACCAACTCAGCACACTaGAGAAAGCTGAATTTTAAA +
Preference number: 4 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSTNSAH*RKLNFK
Trigger: TTTAAAATTCAGCTTTCTTCAGTGTGCTGAGTTGGT...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR GCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTTATTGCTTCAGGAGTTaGCCTCAGTTTTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGYCFRS*PQFCLL
Trigger: AAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATA...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATATCCATTTACTAGATaGAATGCTTGCCATGCTATC +
Preference number: 4 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKYPFTR*NACHAI
Trigger: GATAGCATGGCAAGCATTGCATCTAGTAAATGGATA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR GCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACATATCCATTTACTAGATaGAATGCTTGCCATGCTATC +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTYPFTR*NACHAI
Trigger: GATAGCATGGCAAGCATTGCATCTAGTAAATGGATA...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGAGTACAAGACAGTTTTaGTTCCACTCAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLSTRQF*FHSASS
Trigger: TGAAGAAGCTGAGTGGAAGCAAAACTGTCTTGTACT...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACATTTTCACCAGAAACATaGCTCTTCCAGATCAAGATT +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTFSPET*LFQIKI
Trigger: AATCTTGATCTGGAAGAGCCATGTTTCTGGTGAAAA...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGGTTGTTACATCTTCCTaGTGTATTGACCCTTTTATC +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLVVTSS*CIDPFI
Trigger: GATAAAAGGGTCAATACATCAGGAAGATGTAACAAC...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR TCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTGAAGAATATGTATTCTaGTGTTGGGTGGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGEEYVF*CWVESS
Trigger: AGAACTTTCCACCCAACATCAGAATACATATTCTTC...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATTTTCACCAGAAACATaGCTCTTCCAGATCAAGATT +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLFSPET*LFQIKI
Trigger: AATCTTGATCTGGAAGAGCCATGTTTCTGGTGAAAA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAAAGTCTTCTATTTCCTaGTTTATCTTCTGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTKSSIS*FIFCLG
Trigger: ACCTAGACAGAAGATAAACCAGGAAATAGAAGACTT...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CAA 72 bp ATATTAAACTTATTTCCTATTTCACGTTCTCTCCATTaGTTCCTGTGGATTTGTCTTACCATCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ILNLFPISRSLH*FLWICLTIWSQ
Trigger: CTGACTCCAGATGGTAAGACAAATCCACAGGAACAAATGGAGAGAACGTGAAATAGGAAATAAGTTTAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
3UTR CAA 72 bp TTTCCAAACTCTATCACCAATATTTTCCCATGTAGTTaGTATCCATTTACTAGATGCAATGCTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: FPNSITNIFPCS*YPFTRCNACHA
Trigger: AGCATGGCAAGCATTGCATCTAGTAAATGGATACAAACTACATGGGAAAATATTGGTGATAGAGTTTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR CAA 72 bp AGAGAACGCTTTATTTCCATTTCCGTTTGGCATTCTTaGCTTGTATGTTCCTCTTCTAAAATTCATATGCCT +
Preference number: 4 (lower is better)
Translates to: RERFISISVWHS*LVCSSSKIHMP
Trigger: AGGCATATGAATTTTAGAAGAGGAACATACAAGCAAAGAATGCCAAACGGAAATGGAAATAAAGCGTTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
3UTR CAA 72 bp TTTCATATGCACTCGAGAAGAATATGTATTCTGATGTaGGGTGGAAAGTTCTATAGATGTCTTTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FHMHSRRICILM*GGKFYRCLLGQ
Trigger: TTGACCTAAAAGACATCTATAGAACTTTCCACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR GCA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGTGGAGATGTTTCATATaGACTCGAGAAGAATATGTA +
Preference number: 4 (lower is better)
Translates to: LFKSSISWFIFCLGALLLWRCFI*TREEYV
Trigger: TACATATTCTTCTCGAGTGCATATGAAACATCTCCA...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CCA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAACATACATTCCTCAATaGAGACAGAAGTATCAAGTT +
Preference number: 4 (lower is better)
Translates to: CTLPFILSISSVLYSLQLTYIPQ*RQKYQV
Trigger: AACTTGATACTTCTGTCTCCATTGAGGAATGTATGT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CCA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTATTTGTCTTACCATCTaGAGTCAGTTCTTTAGTACA +
Preference number: 4 (lower is better)
Translates to: ILEMFHMHSRRICILMLGICLTI*SQFFST
Trigger: TGTACTAAAGAACTGACTCCAGATGGTAAGACAAAT...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS CCA 90 bp TGGAGACTGGGGCCTTTACCCTGTGCTGCCTGTTTTCCCTTGTCCTaGAGTAATGATGGGCTCTCAGCTGTGCCACTATCACCCACTGAT +
Preference number: 5 (lower is better)
Translates to: WRLGPLPCAACFPLS*SNDGLSAVPLSPTD
Trigger: ATCAGTGGGTGATAGTGGCACAGCTGAGAGCCCATCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCCAGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS CCA 90 bp CTGAGAGAAGCAGTTTCCTGGTCCTTCTCATGCAGTGTCTGGAATTaGGACAAAGTCATAGTCCCAGCTGCTTCCTTCCCAAAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LREAVSWSFSCSVWN*DKVIVPAASFPKGL
Trigger: CAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGCTTCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS-3UTR CAA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGTCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGSAVCS*QISVAG
Trigger: GCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGA...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCC +
Preference number: 5 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGMQCLE*GQSHSP
Trigger: GGGACTATGACTTTGTCCCAATTCCAGACACTGCAT...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGCGCCGGGTCAGCTGTTaGCTCTTTGCAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPERRVSC*LFANLC
Trigger: ACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCG...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS TCA 90 bp TATTGGCTGCGTCAGCTTCTTAGGCCCAGTCCAACACTGCTCAGGTaGAAAATCAATAACATTTGCCACATGGAGACTGGGGCCTTTACC +
Preference number: 5 (lower is better)
Translates to: YWLRQLLRPSPTLLR*KINNICHMETGAFT
Trigger: GGTAAAGGCCCCAGTCTCCATGTGGCAAATGTTATTGATTTTTCACCTGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS GCA 90 bp CTTCTCATGCAGTGTCTGGAATTGGGACAAAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTTGTACATAGTACCAGGAGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LLMQCLELGQSHSPS*FLPKGLVHSTRSKA
Trigger: AGCTTTGCTCCTGGTACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 90 bp TTAAGCCCTAATTCCCTGAGAGAAGCAGTTTCCTGGTCCTTCTCATaGAGTGTCTGGAATTGGGACAAAGTCATAGTCCCAGCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSPNSLREAVSWSFS*SVWNWDKVIVPAAS
Trigger: GGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGCTTCTCTCAGGGAATTAGGGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 90 bp GGGTCAGCTGTTTGCTCTTTGCAAATCTCTGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCCTTTCTTCAATATCTTGAAGACGGT +
Preference number: 5 (lower is better)
Translates to: GSAVCSLQISVAGKE*ADAPRSFLQYLEDG
Trigger: ACCGTCTTCAAGATATTGAAGAAAGGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 90 bp AGACTTTTCTATTTCCATTTCTCGCCGGGTCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCAAAGAATGCGCTGACGCTCCGAGAT +
Preference number: 5 (lower is better)
Translates to: RLFYFHFSPGQLFAL*KSLWQAKNALTLRD
Trigger: ATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATAGAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEEDGSV*LQELPS
Trigger: TGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGAGGTCTGACTCCAGTTaGTACTACTTCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRRSDSS*YYFLSV
Trigger: TACAGAGAGGAAGTAGTACAAACTGGAGTCAGACCT...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGGACAGAAGTATCAAGTaGATGCTGAAGGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGDRSIK*MLKEAF
Trigger: AAAAGCCTCCTTCAGCATCAACTTGATACTTCTGTC...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp ATTCCTGGTCTCAAGGGATCCAAGGAATCCTCCCACTTCGGCCTACCAAAGTGCCCTTTCTTCAATATCTaGAAGACGGTTCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: IPGLKGSKESSHFGLPKCPFFNI*KTVLYC
Trigger: GCAATACAGAACCGTCTTCAAGATATTGAAGAAAGG...GCACTTTGGTAGGCCGAAGTGGGAGGATTCCTTGGATCCCTTGAGACCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGCTAAGGTTCATGGGATCACCTTaGTTCTTCTTTTGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: WNRANNDTRSLSVTRGLRFMGSP*FFFWGS
Trigger: TGAACCCCAAAAGAAGAACAAAGGTGATCCCATGAA...CCTTAGCCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS GCA 90 bp ACAAATTCTATTGGCTGCGTCAGCTTCTTAGGCCCAGTCCAACACTaGTCAGGTGAAAAATCAATAACATTTGCCACATGGAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: TNSIGCVSFLGPVQH*SGEKSITFATWRLG
Trigger: CCCCAGTCTCCATGTGGCAAATGTTATTGATTTTTCACCTGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGTATTGCTTCAGGAGTaGCCCTCAGTTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEVLLQE*PSVLSS
Trigger: AGAAGACAAAACTGAGGGCAACTCCTGAAGCAATAC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp AATGTTAAGTGTGGCTGTACAGGTCTGACTCCAGTTTGTACTACTTCCTCTCTGATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCC +
Preference number: 5 (lower is better)
Translates to: NVKCGCTGLTPVCTTSSLMQCLE*GQSHSP
Trigger: GGGACTATGACTTTGTCCCAATTCCAGACACTGCAT...CAGAGAGGAAGTAGTACAAACTGGAGTCAGACCTGTACAGCCACACTTAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGAGTTGCCCTCAGTTTaGTCTTCTTTTCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEELPSV*SSFHQK
Trigger: TTTCTGGTGAAAAGAAGACAAAACTGAGGGCAACTC...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTATTGCTTCAGGAGTaGCCCTCAGTTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRVLLQE*PSVLSS
Trigger: AGAAGACAAAACTGAGGGCAACTCCTGAAGCAATAC...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSSAVCS*QISVAG
Trigger: GCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGTTTGACCGTTGCTTTTaGTTCTTTCCAAACTCTATC +
Preference number: 5 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGFDRCF*FFPNSI
Trigger: GATAGAGTTTGGAAAGAACAAAAAGCAACGGTCAAA...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGGGTTTGGGGTTCATCTTTaGTGCCTAATTTTATCTTCC +
Preference number: 5 (lower is better)
Translates to: FSWNRANNDTRSLSVTRGFGVHL*CLILSS
Trigger: GGAAGATAAAATTAGGCACAAAAGATGAACCCCAAA...CCCTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS GCA 90 bp AAACGATTTCTCTGGATTTCATCTTCTGGGACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCAGTCCAACACTGCTCAGGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: KRFLWISSSGTNSIG*VSFLGPVQHCSGEK
Trigger: TTTTTCACCTGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAGAGAAATCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000372487.5
CDS-3UTR CAA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGACAGAAGTATCAAGTaGATGCTGAAGGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRDRSIK*MLKEAF
Trigger: AAAAGCCTCCTTCAGCATCAACTTGATACTTCTGTC...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTGTACTTGTCTGCACTaGTCTTTTTGTGGTATGCTT +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPECTCLH*SFCGML
Trigger: AAGCATACCACAAAAAGACAAGTGCAGACAAGTACA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGATTGAGGTCATGTACTaGTCTGCACTTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPEIEVMY*SALVFL
Trigger: CAAAAAGACAAGTGCAGACAAGTACATGACCTCAAT...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTTATCTTCCTCTTCATaGAGGTCATGTACTTGTCTG +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPELSSSS*RSCTCL
Trigger: CAGACAAGTACATGACCTCAATGAAGAGGAAGATAA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS TCA 90 bp CAAATGCCCATTGATCCATCAGGAGTTAGTATAAATGTCAACTTCTaGCTCCCCCAACTAGACTTAGATGCTCTGTGTTCTGCACTACCT +
Preference number: 5 (lower is better)
Translates to: QMPIDPSGVSINVNF*LPQLDLDALCSALP
Trigger: AGGTAGTGCAGAACACAGAGCATCTAAGTCTAGTTGGGGGAGTCAGAAGTTGACATTTATACTAACTCCTGATGGATCAATGGGCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS GCA 90 bp TCTAAGCTGAAGCACCACTGCAACAAAATGGAACTCCATCGAGAGTaGCGTCATCCAGGAATAATAAATCCTCAATGGAGACAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: SKLKHHCNKMELHRE*RHPGIINPQWRQKY
Trigger: ATACTTCTGTCTCCATTGAGGATTTATTATTCCTGGATGACGGCACTCTCGATGGAGTTCCATTTTGTTGCAGTGGTGCTTCAGCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485676.5
CDS CCA 90 bp ATTTCTGTTTCATTAAGCCCTAATTCCCTGAGAGAAGCAGTTTCCTaGTCCTTCTCATGCAGTGTCTGGAATTGGGACAAAGTCATAGTC +
Preference number: 5 (lower is better)
Translates to: ISVSLSPNSLREAVS*SFSCSVWNWDKVIV
Trigger: GACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGCTTCTCTCAGGGAATTAGGGCTTAATGAAACAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CCA 90 bp AACTTGCCAATCCTGGTAGAAAACTTGAGGCTCATTGTCAGAAGATaGGGAATGCCATACATGGCTGAAGATGTGAACACTGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: NLPILVENLRLIVRR*GMPYMAEDVNTVSE
Trigger: TTCAGAAACAGTGTTCACATCTTCAGCCATGTATGGCATTCCCCATCTTCTGACAATGAGCCTCAAGTTTTCTACCAGGATTGGCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGACCTTTCTTCAATATCTaGAAGACGGTTCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRPFFNI*KTVLYC
Trigger: GCAATACAGAACCGTCTTCAAGATATTGAAGAAAGG...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCGCCGGGTCAGCTGTTaGCTCTTTGCAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSRRVSC*LFANLC
Trigger: ACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACACGCCGGGTCAGCTGTTaGCTCTTTGCAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTRRVSC*LFANLC
Trigger: ACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCG...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAACGCCGGGTCAGCTGTTaGCTCTTTGCAAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKRRVSC*LFANLC
Trigger: ACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCG...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTGTCCAGGCTGGTCTaGAACTCCCAAACTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKLSRLV*NSQTQV
Trigger: CACCTGAGTTTGGGAGTTCAAGACCAGCCTGGACAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGAGTTGAAGACTGATAACTaGTGGAGGAAGCATTCATTA +
Preference number: 5 (lower is better)
Translates to: FSPGTERTMTQDLFQSPELKTDN*WRKHSL
Trigger: TAATGAATGCTTCCTCCACAAGTTATCAGTCTTCAA...CTCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS GCA 90 bp AAACGATTTCTCTGGATTTCATCTTCTGGGACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCAGTCCAACACTCTCATAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: KRFLWISSSGTNSIG*VSFLGPVQHSHKLK
Trigger: TTTCAACTTATGAGAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAGAGAAATCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475556.1
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTGACAGAAGTATCAAGTaGATGCTGAAGGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSDRSIK*MLKEAF
Trigger: AAAAGCCTCCTTCAGCATCAACTTGATACTTCTGTC...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTCCTTCCCAAAGGGCTaGTACATAGTACCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSFPKG*YIVPGA
Trigger: TGCTCCTGGTACTATGTACAAGCCCTTTGGGAAGGA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTGAGTTGCCCTCAGTTTaGTCTTCTTTTCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSELPSV*SSFHQK
Trigger: TTTCTGGTGAAAAGAAGACAAAACTGAGGGCAACTC...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKEDGSV*LQELPS
Trigger: TGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSSAVCS*QISVAG
Trigger: GCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGCTGCCTGTTTTCCCTaGTCCTGGAGTAATGATGGG +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLAACFP*SWSNDG
Trigger: CCCATCATTACTCCAGGACAAGGGAAAACAGGCAGC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CAA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTGCTGCCTGTTTTCCCTaGTCCTGGAGTAATGATGGG +
Preference number: 5 (lower is better)
Translates to: ILEMFHMHSRRICILMLGAACFP*SWSNDG
Trigger: CCCATCATTACTCCAGGACAAGGGAAAACAGGCAGC...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TTTTTCTCCTGGAACCGAGCGAACAATGACACAAGATCTCTTTCAGTCACCCGACTTTTTGTGGTATGCTaGGTAATAAAGAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: FFSWNRANNDTRSLSVTRLFVVC*VIKSLK
Trigger: CTTAAGGCTCTTTATTACCAAGCATACCACAAAAAG...TCGGGTGACTGAAAGAGATCTTGTGTCATTGTTCGCTCGGTTCCAGGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS GCA 90 bp TCAGCAAATTTTCTCTTACATCTTATTTCTAAGCTGAAGCACCACTaGAACAAAATGGAACTCCATCGAGAGTGCCGTCATCCAGGAATA +
Preference number: 5 (lower is better)
Translates to: SANFLLHLISKLKHH*NKMELHRECRHPGI
Trigger: TATTCCTGGATGACGGCACTCTCGATGGAGTTCCATTTTGTTGCAGTGGTGCTTCAGCTTAGAAATAAGATGTAAGAGAAAATTTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485676.5
CDS CCA 90 bp AACATAGGAATTTTTCGGATCTCTTCCTCTGACAAACGATTTCTCTaGATTTCATCTTCTGGGACAAATTCTATTGGCTGCGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NIGIFRISSSDKRFL*ISSSGTNSIGCVSF
Trigger: GAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAGAGAAATCGTTTGTCAGAGGAAGAGATCCGAAAAATTCCTATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000475556.1
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCC +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKMQCLE*GQSHSP
Trigger: GGGACTATGACTTTGTCCCAATTCCAGACACTGCAT...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGGAGTTGCCCTCAGTTTaGTCTTCTTTTCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQELPSV*SSFHQK
Trigger: TTTCTGGTGAAAAGAAGACAAAACTGAGGGCAACTC...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLEDGSV*LQELPS
Trigger: TGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LFKSSISWFIFCLGALLLEDGSV*LQELPS
Trigger: TGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTC...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLSAVCS*QISVAG
Trigger: GCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTTTTGGGGTTCATCTaGGTAATAAAGAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSLLGFI*VIKSLK
Trigger: CTTAAGGCTCTTTATTACCAAGATGAACCCCAAAAG...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTTCAGGTATAATACCTaGTTTGGTTCCCCTGGATTA +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSFRYNT*FGSPGL
Trigger: TAATCCAGGGGAACCAAACAAGGTATTATACCTGAA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp ACTTTTCATTGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATTCACGTTCTCTCCATTaGTTCCTGTGGATTTGTCTT +
Preference number: 5 (lower is better)
Translates to: TFHCFLTSSHVVRGHALHSRSLH*FLWICL
Trigger: AAGACAAATCCACAGGAACAAATGGAGAGAACGTGA...ATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACAATGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS CCA 90 bp TTGTCACTAAATGTTACATGTTTATCTCTCCAACCAGACTATACTTaGCACAAGGTGAGGAACCATTTCTTAAACTTCCATGCACCTTCC +
Preference number: 5 (lower is better)
Translates to: LSLNVTCLSLQPDYT*HKVRNHFLNFHAPS
Trigger: GGAAGGTGCATGGAAGTTTAAGAAATGGTTCCTCACCTTGTGCCAAGTATAGTCTGGTTGGAGAGATAAACATGTAACATTTAGTGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS-3UTR CAA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCC +
Preference number: 5 (lower is better)
Translates to: LFKSSISWFIFCLGALLLMQCLE*GQSHSP
Trigger: GGGACTATGACTTTGTCCCAATTCCAGACACTGCAT...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAGTATTGCTTCAGGAGTaGCCCTCAGTTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTVLLQE*PSVLSS
Trigger: AGAAGACAAAACTGAGGGCAACTCCTGAAGCAATAC...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTACCTTTGTTCTTCTTTaGGGGTTCATCTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSTFVLL*GFILVI
Trigger: TATTACCAAGATGAACCCCAAAAGAAGAACAAAGGT...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTTTTGACCGTTGCTTTTaGTTCTTTCCAAACTCTATC +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSFDRCF*FFPNSI
Trigger: GATAGAGTTTGGAAAGAACAAAAAGCAACGGTCAAA...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGTTTTCTAACTTCATCCCATGTGGTCAGAGGGCATGCTTTGCATGATTTCAGTCTTTCCTTTCAGTTTTaGCTTCATGTATTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CFLTSSHVVRGHALHDFSLSFQF*LHVFWA
Trigger: AGCCCAAAATACATGAAGCAAAAACTGAAAGGAAAG...ACTGAAATCATGCAAAGCATGCCCTCTGACCACATGGGATGAAGTTAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TTTCCTTTCTGTTCTTCAGCCTGGATAATATCTCAGTTCATCTTCACAACCCAGTGTACTTGTCTGCACTaGTCTTTTTGTGGTATGCTT +
Preference number: 5 (lower is better)
Translates to: FPFCSSAWIISQFIFTTQCTCLH*SFCGML
Trigger: AAGCATACCACAAAAAGACAAGTGCAGACAAGTACA...CTGGGTTGTGAAGATGAACTGAGATATTATCCAGGCTGAAGAACAGAAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGACAGAAGTATCAAGTaGATGCTGAAGGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKDRSIK*MLKEAF
Trigger: AAAAGCCTCCTTCAGCATCAACTTGATACTTCTGTC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGTATTGCTTCAGGAGTaGCCCTCAGTTTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLVLLQE*PSVLSS
Trigger: AGAAGACAAAACTGAGGGCAACTCCTGAAGCAATAC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCTTCATGGGATCACCTTaGTTCTTCTTTTGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSFMGSP*FFFWGS
Trigger: TGAACCCCAAAAGAAGAACAAAGGTGATCCCATGAA...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACATTTGTTCCTGTGGATTaGTCTTACCATCTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTFVPVD*SYHLES
Trigger: TGACTCCAGATGGTAAGACAAATCCACAGGAACAAA...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTGAAGTGGAATCAGACTaGTTTCTGACATCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: ILEMFHMHSRRICILMLGEVESD*FLTSLP
Trigger: AGGCAGAGATGTCAGAAACAAGTCTGATTCCACTTC...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCGTTTGGCATTCTTaGCTTGTATGTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKSVWHS*LVCSSS
Trigger: AGAAGAGGAACATACAAGCAAAGAATGCCAAACGGA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAGAGTTGCCCTCAGTTTaGTCTTCTTTTCACCAGAAA +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLELPSV*SSFHQK
Trigger: TTTCTGGTGAAAAGAAGACAAAACTGAGGGCAACTC...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp GTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATCCTAGATCCCTTTTGGGGTTCATCTaGGTAATAAAGAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: VFPLQLQTNWCLYINPRSLLGFI*VIKSLK
Trigger: CTTAAGGCTCTTTATTACCAAGATGAACCCCAAAAG...GGATCTAGGATTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CAA 90 bp TTGTTCAAGTCTTCTATTTCCTGGTTTATCTTCTGTCTAGGTGCTCTATTATTGTTCATGGGATCACCTTaGTTCTTCTTTTGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LFKSSISWFIFCLGALLLFMGSP*FFFWGS
Trigger: TGAACCCCAAAAGAAGAACAAAGGTGATCCCATGAA...CAATAATAGAGCACCTAGACAGAAGATAAACCAGGAAATAGAAGACTTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAGGTATAATACCTTGTTaGGTTCCCCTGGATTATATG +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKGIIPC*VPLDYM
Trigger: CATATAATCCAGGGGAACCAAACAAGGTATTATACC...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CAA 90 bp TCAGACTTGTTTCTGACATCTCTGCCTTTTATAGTATTGCTTAATCCATGCACAGGTATAATACCTTGTTaGGTTCCCCTGGATTATATG +
Preference number: 5 (lower is better)
Translates to: SDLFLTSLPFIVLLNPCTGIIPC*VPLDYM
Trigger: CATATAATCCAGGGGAACCAAACAAGGTATTATACC...TGTGCATGGATTAAGCAATACTATAAAAGGCAGAGATGTCAGAAACAAGTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAAATTGAGGTCATGTACTaGTCTGCACTTGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKIEVMY*SALVFL
Trigger: CAAAAAGACAAGTGCAGACAAGTACATGACCTCAAT...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTATCTTCCTCTTCATaGAGGTCATGTACTTGTCTG +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKLSSSS*RSCTCL
Trigger: CAGACAAGTACATGACCTCAATGAAGAGGAAGATAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAACTCGTAAGAAAGATTTaGGAAGTCTTCTCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKLVRKI*EVFSGK
Trigger: TTTCCCAGAGAAGACTTCCAAAATCTTTCTTACGAG...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTACCTTTCTTCAATATCTaGAAGACGGTTCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLPFFNI*KTVLYC
Trigger: GCAATACAGAACCGTCTTCAAGATATTGAAGAAAGG...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTATTCAGGTATAATACCTaGTTTGGTTCCCCTGGATTA +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLFRYNT*FGSPGL
Trigger: TAATCCAGGGGAACCAAACAAGGTATTATACCTGAA...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CAA 90 bp CCCTCAGTTAGTTTTTCCTCTTCAACTCCAAACAAACTGGTGTCTATACATAAATTTGACCGTTGCTTTTaGTTCTTTCCAAACTCTATC +
Preference number: 5 (lower is better)
Translates to: PSVSFSSSTPNKLVSIHKFDRCF*FFPNSI
Trigger: GATAGAGTTTGGAAAGAACAAAAAGCAACGGTCAAA...TTTATGTATAGACACCAGTTTGTTTGGAGTTGAAGAGGAAAAACTAACTGAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000495517.5
CDS-3UTR CAA 90 bp ATTTTGGAGATGTTTCATATGCACTCGAGAAGAATATGTATTCTGATGTTGGGTTTTGCTTCATGTATTTaGGGCTCTACTGTTAGATGC +
Preference number: 5 (lower is better)
Translates to: ILEMFHMHSRRICILMLGFASCI*GSTVRC
Trigger: GCATCTAACAGTAGAGCCCAAAATACATGAAGCAAA...ACCCAACATCAGAATACATATTCTTCTCGAGTGCATATGAAACATCTCCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372487.5
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTAACCTTTGTTCTTCTTTaGGGGTTCATCTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLTFVLL*GFILVI
Trigger: TATTACCAAGATGAACCCCAAAAGAAGAACAAAGGT...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372479.7
CDS-3UTR CAA 90 bp TGCACTTTACCCTTCATACTCAGCATATCATCTGTCCTATATAGTCTTCAATTACTTTTTGTGGTATGCTaGGTAATAAAGAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: CTLPFILSISSVLYSLQLLFVVC*VIKSLK
Trigger: CTTAAGGCTCTTTATTACCAAGCATACCACAAAAAG...TAATTGAAGACTATATAGGACAGATGATATGCTGAGTATGAAGGGTAAAGTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS CAA 90 bp GCCACATGGAGACTGGGGCCTTTACCCTGTGCTGCCTGTTTTCCCTaGTCCTGGAGTAATGATGGGCTCTCAGCTGTGCCACTATCACCC +
Preference number: 6 (lower is better)
Translates to: ATWRLGPLPCAACFP*SWSNDGLSAVPLSP
Trigger: GGGTGATAGTGGCACAGCTGAGAGCCCATCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCCAGTCTCCATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS CCA 72 bp TCGCCGGGTCAGCTGTTTGCTCTTTGCAAATCTCTGTaGCAGGCAAAGAATGCGCTGACGCTCCGAGATCCT +
Preference number: 6 (lower is better)
Translates to: SPGQLFALCKSL*QAKNALTLRDP
Trigger: AGGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 72 bp AGACTGGGGCCTTTACCCTGTGCTGCCTGTTTTCCCTaGTCCTGGAGTAATGATGGGCTCTCAGCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: RLGPLPCAACFP*SWSNDGLSAVP
Trigger: TGGCACAGCTGAGAGCCCATCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS CCA 72 bp GGGCCTTTACCCTGTGCTGCCTGTTTTCCCTTGTCCTaGAGTAATGATGGGCTCTCAGCTGTGCCACTATCA +
Preference number: 6 (lower is better)
Translates to: GPLPCAACFPLS*SNDGLSAVPLS
Trigger: TGATAGTGGCACAGCTGAGAGCCCATCATTACTCCAGGACAAGGGAAAACAGGCAGCACAGGGTAAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS CAA 90 bp CCTGAGAGAAGCAGTTTCCTGGTCCTTCTCATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCCAGCTGCTTCCTTCCCAAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: PERSSFLVLLMQCLE*GQSHSPSCFLPKGL
Trigger: AAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGCTTCTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CCA 72 bp GCAGTTTCCTGGTCCTTCTCATGCAGTGTCTGGAATTaGGACAAAGTCATAGTCCCAGCTGCTTCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: AVSWSFSCSVWN*DKVIVPAASFP
Trigger: TGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 72 bp AGCAGTTTCCTGGTCCTTCTCATGCAGTGTCTGGAATaGGGACAAAGTCATAGTCCCAGCTGCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SSFLVLLMQCLE*GQSHSPSCFLP
Trigger: GGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTGCATGAGAAGGACCAGGAAACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp CAGTGTCTGGAATTGGGACAAAGTCATAGTCCCAGCTaGTTCCTTCCCAAAGGGCTTGTACATAGTACCAGG +
Preference number: 6 (lower is better)
Translates to: QCLELGQSHSPS*FLPKGLVHSTR
Trigger: CCTGGTACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATTCCAGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp TATTTCCATTTCTCGCCGGGTCAGCTGTTTGCTCTTTaGAAATCTCTGTGGCAGGCAAAGAATGCGCTGACG +
Preference number: 6 (lower is better)
Translates to: YFHFSPGQLFAL*KSLWQAKNALT
Trigger: CGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 72 bp CTATTTCCATTTCTCGCCGGGTCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGCAAAGAATGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: LFPFLAGSAVCS*QISVAGKECAD
Trigger: GTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 90 bp AAGACTTTTCTATTTCCATTTCTCGCCGGGTCAGCTGTTTGCTCTTaGCAAATCTCTGTGGCAGGCAAAGAATGCGCTGACGCTCCGAGA +
Preference number: 6 (lower is better)
Translates to: KTFLFPFLAGSAVCS*QISVAGKECADAPR
Trigger: TCTCGGAGCGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATAGAAAAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp CTCTGGATTTCATCTTCTGGGACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCAGTCCAACACTGCTCA +
Preference number: 6 (lower is better)
Translates to: LWISSSGTNSIG*VSFLGPVQHCS
Trigger: TGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372479.7
ENST00000372487.5
CDS GCA 72 bp AGAATACTAAATGTTGAGGTCCTCCCAGTCCTTTTCTaGCATTTGGCTCCTAGAACGCTGGTAGTACCCTCG +
Preference number: 6 (lower is better)
Translates to: RILNVEVLPVLF*HLAPRTLVVPS
Trigger: CGAGGGTACTACCAGCGTTCTAGGAGCCAAATGGCAGAAAAGGACTGGGAGGACCTCAACATTTAGTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS CAA 90 bp CAGGCAAAGAATGCGCTGACGCTCCGAGATCCTTTCTTCAATATCTaGAAGACGGTTCTGTATTGCTTCAGGAGTTGCCCTCAGTTTTGT +
Preference number: 6 (lower is better)
Translates to: QAKNALTLRDPFFNI*KTVLYCFRSCPQFC
Trigger: ACAAAACTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTCAAGATATTGAAGAAAGGATCTCGGAGCGTCAGCGCATTCTTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp ATTGGCTGCGTCAGCTTCTTAGGCCCAGTCCAACACTaGTCAGGTGAAAAATCAATAACATTTGCCACATGG +
Preference number: 6 (lower is better)
Translates to: IGCVSFLGPVQH*SGEKSITFATW
Trigger: CCATGTGGCAAATGTTATTGATTTTTCACCTGAGCAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000485676.5
CDS GCA 72 bp CTCTGGATTTCATCTTCTGGGACAAATTCTATTGGCTaGGTCAGCTTCTTAGGCCCAGTCCAACACTCTCAT +
Preference number: 6 (lower is better)
Translates to: LWISSSGTNSIG*VSFLGPVQHSH
Trigger: ATGAGAGTGTTGGACTGGGCCTAAGAAGCTGACGCAGCCAATAGAATTTGTCCCAGAAGATGAAATCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475556.1
CDS GCA 72 bp GTTTGCTCTTTGCAAATCTCTGTGGCAGGCAAAGAATaGGCTGACGCTCCGAGATCCTTTCTTCAATATCTT +
Preference number: 6 (lower is better)
Translates to: VCSLQISVAGKE*ADAPRSFLQYL
Trigger: AAGATATTGAAGAAAGGATCTCGGAGCGTCAGCGCATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 72 bp AAAGTCATAGTCCCAGCTGCTTCCTTCCCAAAGGGCTaGTACATAGTACCAGGAGCAAAGCTCTCTTTCTTA +
Preference number: 6 (lower is better)
Translates to: KVIVPAASFPKG*YIVPGAKLSFL
Trigger: TAAGAAAGAGAGCTTTGCTCCTGGTACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 72 bp GACTTTTCTATTTCCATTTCTCGCCGGGTCAGCTGTTaGCTCTTTGCAAATCTCTGTGGCAGGCAAAGAATG +
Preference number: 6 (lower is better)
Translates to: DFSISISRRVSC*LFANLCGRQRM
Trigger: CATTCTTTGCCTGCCACAGAGATTTGCAAAGAGCAAACAGCTGACCCGGCGAGAAATGGAAATAGAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 90 bp AATTGGGACAAAGTCATAGTCCCAGCTGCTTCCTTCCCAAAGGGCTaGTACATAGTACCAGGAGCAAAGCTCTCTTTCTTAGACATACAT +
Preference number: 6 (lower is better)
Translates to: NWDKVIVPAASFPKG*YIVPGAKLSFLDIH
Trigger: ATGTATGTCTAAGAAAGAGAGCTTTGCTCCTGGTACTATGTACAAGCCCTTTGGGAAGGAAGCAGCTGGGACTATGACTTTGTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp AAGCACCACTGCAACAAAATGGAACTCCATCGAGAGTaGCGTCATCCAGGAATAATAAATCCTCAATGGAGA +
Preference number: 6 (lower is better)
Translates to: KHHCNKMELHRE*RHPGIINPQWR
Trigger: TCTCCATTGAGGATTTATTATTCCTGGATGACGGCACTCTCGATGGAGTTCCATTTTGTTGCAGTGGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485676.5
CDS CAA 90 bp GACGCTCCGAGATCCTTTCTTCAATATCTTGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCAGTTTTGTCTTCTTTTCACCAGAAA +
Preference number: 6 (lower is better)
Translates to: DAPRSFLQYLEDGSV*LQELPSVLSSFHQK
Trigger: TTTCTGGTGAAAAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTCAAGATATTGAAGAAAGGATCTCGGAGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 90 bp TCTCTCAGTGAAAGAATATATCAAAGTCAGTGGGGATCACATACCTaGGTAATAAAGAGCCTTAAGGAAGGAGTGACGATCAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLSERIYQSQWGSHT*VIKSLKEGVTISSL
Trigger: CAGGGAGCTGATCGTCACTCCTTCCTTAAGGCTCTTTATTACCAAGGTATGTGATCCCCACTGACTTTGATATATTCTTTCACTGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS CAA 72 bp GCCACTTCTTCTACTCCTGCCACGTTAAACTTCTCATaGTTCCTTAGACACACCAGGTTCTTTCATAATCCT +
Preference number: 6 (lower is better)
Translates to: ATSSTPATLNFS*FLRHTRFFHNP
Trigger: AGGATTATGAAAGAACCTGGTGTGTCTAAGGAACAATGAGAAGTTTAACGTGGCAGGAGTAGAAGAAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS TCA 72 bp TCAGAAGATGGGGAATGCCATACATGGCTGAAGATGTaGACACTGTTTCTGAAAGCAAGGAAACTAAGAGAA +
Preference number: 6 (lower is better)
Translates to: SEDGECHTWLKM*TLFLKARKLRE
Trigger: TTCTCTTAGTTTCCTTGCTTTCAGAAACAGTGTTCACATCTTCAGCCATGTATGGCATTCCCCATCTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495517.5
CDS GCA 72 bp GATCCTTTCTTCAATATCTTGAAGACGGTTCTGTATTaGTTCAGGAGTTGCCCTCAGTTTTGTCTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: DPFFNILKTVLY*FRSCPQFCLLF
Trigger: GAAAAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTCAAGATATTGAAGAAAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS GCA 72 bp CTGACTCCCCCAACTAGACTTAGATGCTCTGTGTTCTaGACTACCTCAGCATTTTATTCAAATCTCTATAAT +
Preference number: 6 (lower is better)
Translates to: LTPPTRLRCSVF*TTSAFYSNLYN
Trigger: ATTATAGAGATTTGAATAAAATGCTGAGGTAGTGCAGAACACAGAGCATCTAAGTCTAGTTGGGGGAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS CAA 72 bp TCTTCCTCTTCATTGAGGTCATGTACTTGTCTGCACTaGTCTTTTTGTGGTATGCTTGGTAATAAAGAGCCT +
Preference number: 6 (lower is better)
Translates to: SSSSLRSCTCLH*SFCGMLGNKEP
Trigger: AGGCTCTTTATTACCAAGCATACCACAAAAAGACAAGTGCAGACAAGTACATGACCTCAATGAAGAGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434854.1
ENST00000495517.5
CDS CAA 72 bp GAAAGAATATATCAAAGTCAGTGGGGATCACATACCTaGGTAATAAAGAGCCTTAAGGAAGGAGTGACGATC +
Preference number: 6 (lower is better)
Translates to: ERIYQSQWGSHT*VIKSLKEGVTI
Trigger: GATCGTCACTCCTTCCTTAAGGCTCTTTATTACCAAGGTATGTGATCCCCACTGACTTTGATATATTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS CAA 90 bp ATTGTCACTAAATGTTACATGTTTATCTCTCCAACCAGACTATACTaGGCACAAGGTGAGGAACCATTTCTTAAACTTCCATGCACCTTC +
Preference number: 6 (lower is better)
Translates to: IVTKCYMFISPTRLY*AQGEEPFLKLPCTF
Trigger: GAAGGTGCATGGAAGTTTAAGAAATGGTTCCTCACCTTGTGCCAAGTATAGTCTGGTTGGAGAGATAAACATGTAACATTTAGTGACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS TCA 72 bp GGTAGTATTAAAAGAACATTTAAATCTTACCTCCTCTaGGAGGGCTTCTTCAATCACACCAATACACAGTGG +
Preference number: 6 (lower is better)
Translates to: GSIKRTFKSYLL*EGFFNHTNTQW
Trigger: CCACTGTGTATTGGTGTGATTGAAGAAGCCCTCTCAGAGGAGGTAAGATTTAAATGTTCTTTTAATACTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471079.1
CDS CAA 72 bp AGATCCTTTCTTCAATATCTTGAAGACGGTTCTGTATaGCTTCAGGAGTTGCCCTCAGTTTTGTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: RSFLQYLEDGSV*LQELPSVLSSF
Trigger: AAAAGAAGACAAAACTGAGGGCAACTCCTGAAGCAATACAGAACCGTCTTCAAGATATTGAAGAAAGGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372479.7
ENST00000372487.5
ENST00000434854.1
ENST00000471079.1
ENST00000485676.5
ENST00000495517.5
CDS CAA 90 bp CTCTTTTCTAGAGAACGCTTTATTTCCATTTCCGTTTGGCATTCTTaGCTTGTATGTTCCTCTTCTAAAATTCATATGCCTGTAGCACAT +
Preference number: 6 (lower is better)
Translates to: LFSRERFISISVWHS*LVCSSSKIHMPVAH
Trigger: ATGTGCTACAGGCATATGAATTTTAGAAGAGGAACATACAAGCAAAGAATGCCAAACGGAAATGGAAATAAAGCGTTCTCTAGAAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474499.1