RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM38 (Homo sapiens)

Ensembl gene IDs: ENSG00000132819

Ensembl transcript IDs: ENST00000342690.4, ENST00000344785.10, ENST00000356208.10, ENST00000371219.2, ENST00000440234.6

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTGGTaGCCGCGGGTGCTGCGGCTGAGAGGGCCTGGGGCACGGCGGCAG +
Preference number: 1 (lower is better)
Translates to: SCQAAAAAPGTARKW*PRVLRLRGPGARRQ
Trigger: CTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR GCA 90 bp CCCAGGGCGCAGGCGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: PRAQAECPSGLRRHG*WWHLTEAQPGCRQP
Trigger: GGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGCCTGCGCCCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp GCATCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTaGTGCCCGCGGGTGCTGCGGCTGAGAGGGCCTGGGGCACGGCGG +
Preference number: 1 (lower is better)
Translates to: ASCQAAAAAPGTARK*CPRVLRLRGPGARR
Trigger: CCGCCGTGCCCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR TCA 90 bp CGGCGCCTGGTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCGGCTaGGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAA +
Preference number: 1 (lower is better)
Translates to: RRLVLHESGARGCCG*EGLGHGGRVAVAHE
Trigger: TTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR TCA 90 bp TCTGCCACCCCGGCAGGCGGCAGCAGACAGTGGCCCGCACGGGCCTaGGGGGCCTCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCT +
Preference number: 1 (lower is better)
Translates to: SATPAGGSRQWPARA*GASCLWCPSHREDP
Trigger: AGGATCCTCTCGGTGGGATGGGCACCACAGACAGGAGGCCCCTCAGGCCCGTGCGGGCCACTGTCTGCTGCCGCCTGCCGGGGTGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp GCCCCTCACTGCATCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTaGACGAAAGTGGTGCCCGCGGGTGCTGCGGCTGAGAGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: APHCILSGCSCGAWY*TKVVPAGAAAERAW
Trigger: CCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR GCA 90 bp CCTCGGGGCAGGAACGCCCCTCACTGCATCCTGTCAGGCTGCAGCTaGGGCGCCTGGTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCG +
Preference number: 1 (lower is better)
Translates to: PRGRNAPHCILSGCS*GAWYCTKVVPAGAA
Trigger: CGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCTGCCCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 90 bp GCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCACGGCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: ATGQGRLGSPRWAAR*LVGRCSAGSATAQE
Trigger: CTCCTGGGCCGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 90 bp TGGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACT +
Preference number: 1 (lower is better)
Translates to: WQPWQARRRMGTGHR*PVGTGRRPGWPACT
Trigger: AGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 90 bp AGGGCGCAGGCGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTaGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCATC +
Preference number: 1 (lower is better)
Translates to: RAQAECPSGLRRHGC*WHLTEAQPGCRQPI
Trigger: GATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGCCTGCGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp CACACAGCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTaGACTCAACCGCTCCAGCGGGCAGAGCTGAGGGCCACTGCCCCC +
Preference number: 1 (lower is better)
Translates to: HTAGGAGVEGRGAPF*TQPLQRAELRATAP
Trigger: GGGGGCAGTGGCCCTCAGCTCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp AGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCGGGGTCAGCC +
Preference number: 1 (lower is better)
Translates to: RARTATGQGRLGSPR*AARWLVGRCSAGSA
Trigger: GGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 90 bp GCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGG +
Preference number: 1 (lower is better)
Translates to: AVAHEAGSRGRRGGV*VLVIGGRWVLGVGR
Trigger: CCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 90 bp AGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCATAGG +
Preference number: 1 (lower is better)
Translates to: RGPGARRQGSCSPRS*QPWQARRRMGTGHR
Trigger: CCTATGACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 90 bp GCGCAGGCGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTaGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCATCATG +
Preference number: 1 (lower is better)
Translates to: AQAECPSGLRRHGCW*HLTEAQPGCRQPIM
Trigger: CATGATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGCCTGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR TCA 90 bp ATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACTaGAGCTCAGCCGGGCTGTCGCCAGCCCATCATGGCCTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: MPERSSEARVLVAPH*SSAGLSPAHHGLAA
Trigger: AGCTGCCAGGCCATGATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp CACAGTCCTCGGGGCAGGAACGCCCCTCACTGCATCCTGTCAGGCTaGAGCTGCGGCGCCTGGTACTGCACGAAAGTGGTGCCCGCGGGT +
Preference number: 1 (lower is better)
Translates to: HSPRGRNAPHCILSG*SCGAWYCTKVVPAG
Trigger: ACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCTGCCCCGAGGACTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 90 bp AGGAACGCCCCTCACTGCATCCTGTCAGGCTGCAGCTGCGGCGCCTaGTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCGGCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: RNAPHCILSGCSCGA*YCTKVVPAGAAAER
Trigger: CCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 90 bp GCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCT +
Preference number: 1 (lower is better)
Translates to: ATGQGRLGSPRWAAR*LVGRCSAGSARKSA
Trigger: AGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR TCA 90 bp CCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCCTCCGGGCTTaGGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCAA +
Preference number: 1 (lower is better)
Translates to: PCYRRPLCAWELLRA*GSRPRALMEKMGLQ
Trigger: TTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp GGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAG +
Preference number: 1 (lower is better)
Translates to: GTGHRWPVGTGRRPG*PACTQCRARTATGQ
Trigger: CTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR CCA 90 bp CGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTA +
Preference number: 1 (lower is better)
Translates to: RGRRGGVWVLVIGGR*VLGVGRAGRRVLNV
Trigger: TACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCTGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGGAT +
Preference number: 1 (lower is better)
Translates to: RDRGGWDHHAGLHDG*WVDVVRGQPVSPLD
Trigger: ATCCAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR TCA 90 bp GCGCCTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTaGTGGAGAAAATGGGACTCCAACAGGAGGCCGTGTCCTCACACC +
Preference number: 1 (lower is better)
Translates to: APGSSSGLEEAAHVP*WRKWDSNRRPCPHT
Trigger: GGTGTGAGGACACGGCCTCCTGTTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp CTCAGCCGGGCTGTCGCCAGCCCATCATGGCCTGGCAGCTCTGTCTaGTGTGAAGGTGACAATGCCACAGTCCTCGGGGCAGGAACGCCC +
Preference number: 1 (lower is better)
Translates to: LSRAVASPSWPGSSV*CEGDNATVLGAGTP
Trigger: GGGCGTTCCTGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGACAGCCCGGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp CCTGTGCGCCTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTaGCCTGATGGAGAAAATGGGACTCCAACAGGAGGCCGTGTCCTC +
Preference number: 1 (lower is better)
Translates to: PVRLGAPPGLRKPPT*PDGENGTPTGGRVL
Trigger: GAGGACACGGCCTCCTGTTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAGGCGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp ATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAGGGCGCAGGCGGAATaGCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACT +
Preference number: 1 (lower is better)
Translates to: IKEKPSLRCPRAQAE*PSGLRRHGCWWHLT
Trigger: AGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGCCTGCGCCCTGGGACAGCGGAGAGACGGCTTCTCTTTAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp ACCCCCAAGACAGGCAGGAACCGTCTCAGGCTGGCACACAGCAGGTaGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACC +
Preference number: 1 (lower is better)
Translates to: TPKTGRNRLRLAHSR*CGGRGKRRTLLHST
Trigger: GGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp GACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGGATCAA +
Preference number: 1 (lower is better)
Translates to: DRGGWDHHAGLHDGW*VDVVRGQPVSPLDQ
Trigger: TTGATCCAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR TCA 90 bp AGGAAGGGAAGGGAGAGGAGTGTCAACGTCGCAGTGACGGGGTCCTaGGACAACTCACTCTGCCACCCCGGCAGGCGGCAGCAGACAGTG +
Preference number: 1 (lower is better)
Translates to: RKGRERSVNVAVTGS*DNSLCHPGRRQQTV
Trigger: CACTGTCTGCTGCCGCCTGCCGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACTGCGACGTTGACACTCCTCTCCCTTCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 90 bp CGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTA +
Preference number: 1 (lower is better)
Translates to: RVLNVGRGQRRDRGG*DHHAGLHDGWWVDV
Trigger: TACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR CCA 90 bp CCGGTCGGCCATGGTCACCTGGGGCTCTCCCACAAAGATGCCTCCTaGATTCCAGCTCCTCCCGTCAAAGTTCAAGGCCTGGGAAATGTG +
Preference number: 1 (lower is better)
Translates to: PVGHGHLGLSHKDAS*IPAPPVKVQGLGNV
Trigger: CACATTTCCCAGGCCTTGAACTTTGACGGGAGGAGCTGGAATCCAGGAGGCATCTTTGTGGGAGAGCCCCAGGTGACCATGGCCGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CCA 90 bp CTGAGGGGCCTCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCTaGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCG +
Preference number: 1 (lower is better)
Translates to: LRGLLSVVPIPPRGS*PASRQTLYYTETLS
Trigger: CGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGACAGGAGGCCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 90 bp ACAGCTCGGGAGGATCAAGTTACAATAAACAGTCCATTAACTTCTTaGTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: TAREDQVTINSPLTS*FQVSLESGISAQSR
Trigger: CCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACTGTTTATTGTAACTTGATCCTCCCGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp GGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCCGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GLGHGGRVAVAHEAGSRGRDRGG*DHHAGL
Trigger: CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG...GCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR-3UTR CCA 90 bp GGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: GLGHGGRVAVAHEAGSRGCSPRS*QPWQAR
Trigger: CCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA...GCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR-3UTR GCA 90 bp GAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTTGCGGCGCCTGGTACTaGACGAAAGTGGTGCCCGCG +
Preference number: 2 (lower is better)
Translates to: EGLGHGGRVAVAHEAGSRCGAWY*TKVVPA
Trigger: CGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCA...ACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR CCA 90 bp GGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGT +
Preference number: 2 (lower is better)
Translates to: GRAGRRVLNVGRGQRRDRGRRPG*PACTQC
Trigger: ACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC...CCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR-3UTR CCA 90 bp GCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ARRQGSCSPRSWQPWQARRRGGV*VLVIGG
Trigger: GCCACCTATGACCAGTACCCATACGCCGCCTCGCCT...CCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR-3UTR GCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCACTGCACGAAAGTGGTaGCCGCGGGTGCTGCGGCTG +
Preference number: 2 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLTARKW*PRVLRL
Trigger: CAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGT...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR GCA 90 bp TCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGAGACACCCCGCCACGATaGAGCAGTGGGGACACAAGC +
Preference number: 2 (lower is better)
Translates to: SCLWCPSHREDPGPRAGRDTPPR*SSGDTS
Trigger: GCTTGTGTCCCCACTGCTGCATCGTGGCGGGGTGTC...TCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp GTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: VAHEAGSRGRRGGVWVLVLGSPR*AARWLV
Trigger: CACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAG...GACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR-3UTR CCA 90 bp AGGCTGGCACACAGCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGGGTACTGCACGAAAGTaGTGCCCGCGGGTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: RLAHSRWCGGRGKRRTLLGTARK*CPRVLR
Trigger: CCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACC...CAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR CCA 90 bp CTGCACGATGGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGCCGCCCGGTCGGCCATaGTCACCTGGGGCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: LHDGWWVDVVRGQPVSPLPPGRP*SPGALP
Trigger: TGGGAGAGCCCCAGGTGACCATGGCCGACCGGGCGG...CAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR CCA 90 bp ATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCTGCTGCACCCCAATaGCAAAGCCCGTCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: MGTGHRWPVGTGRRPGWPAAAPQ*QSPSGG
Trigger: GCCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGC...CGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR TCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTGCCGCCCACGTGCCCTaGTGGAGAAAATGGGACTCC +
Preference number: 2 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFAAHVP*WRKWDS
Trigger: GGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGC...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR TCA 90 bp CTGCACCCCAATGGCAAAGCCCGTCTGGAGGCTCCGCGGCTTGGCGCCCAGATACCTTGCGGCCGTCGATaGTGGGGTTCGGGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: LHPNGKARLEAPRLGAQIPCGRR*WGSGLC
Trigger: GCAAAGACCCGAACCCCATCATCGACGGCCGCAAGG...TATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCATTGGGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR CCA 90 bp GGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGT +
Preference number: 2 (lower is better)
Translates to: GRWVLGVGRAGRRVLNVGLHDGW*VDVVRG
Trigger: ACCCCGCACTACATCTACCCACCAGCCATCGTGCAG...CCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR-3UTR CCA 90 bp ATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 2 (lower is better)
Translates to: MGTGHRWPVGTGRRPGWPGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...CGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR-3UTR CCA 90 bp CTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGAGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 2 (lower is better)
Translates to: LGVGRAGRRVLNVGRGQRGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...TCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR-3UTR CCA 90 bp CGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCGGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGT +
Preference number: 2 (lower is better)
Translates to: RLGSPRWAARWLVGRCSAGRRPG*PACTQC
Trigger: ACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC...CGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR-3UTR GCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCCTCACACCTCAGACTaGGCTCACAGCTCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLPHTSD*AHSSGG
Trigger: TCCTCCCGAGCTGTGAGCGCAGTCTGAGGTGTGAGG...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CCCCAATGGCAAAGCCCGTCTGGAGGCTCCGCGGCTTGGCGCCCAGATATGCCATGGGGTTCGGGTCTTTaGAAGCCCTCTCAGCTGCCG +
Preference number: 2 (lower is better)
Translates to: PQWQSPSGGSAAWRPDMPWGSGL*KPSQLP
Trigger: CGGCAGCTGAGAGGGCTTGCAAAGACCCGAACCCCA...TGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCATTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR CCA 90 bp GGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGCGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGT +
Preference number: 2 (lower is better)
Translates to: GGVWVLVIGGRWVLGVGRRWAAR*LVGRCS
Trigger: ACTACATCTACCCACCAGCCATCGTGCAGCCCAGCG...CCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR-3UTR CCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCAGGCACGGGTGCTGGTaGCACCTCACTGAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLRHGCW*HLTEAQ
Trigger: CTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCT...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp TCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGAAAGCCTGAGGGAACCTaGAGTGTGGAGAGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SCLWCPSHREDPGPRAGRKPEGT*SVERQE
Trigger: CTCCTGCCTCTCCACACTCCAGGTTCCCTCAGGCTT...TCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp GGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAGAGCCACGATGCAGCAGTaGGGACACAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGRGKRRTLLHSTAPAGRATMQQ*GHKPEG
Trigger: TCCCTCAGGCTTGTGTCCCCACTGCTGCATCGTGGC...TCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp CTGCACGATGGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGT +
Preference number: 2 (lower is better)
Translates to: LHDGWWVDVVRGQPVSPLGGSAA*RPDMPG
Trigger: ACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCC...CAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR TCA 90 bp CCCTCCACCAACCCCCAAGACAGGCAGGAACCGTCTCAGGCTGGCACACAGCAGGTGGGGACACAAGCCTaGGGGAACCTGGAGTGTGGA +
Preference number: 2 (lower is better)
Translates to: PSTNPQDRQEPSQAGTQQVGTQA*GNLECG
Trigger: TCCACACTCCAGGTTCCCTCAGGCTTGTGTCCCCAC...CTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGTTGGTGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCGAGGCTGCCATGGTGTaGAAGGAACCTGGGATTGCG +
Preference number: 2 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLEAAMV*KEPGIA
Trigger: CGCAATCCCAGGTTCCTTGCACACCATGGCAGCCTC...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTGGTGCAAGGAGAGGCTaGCATGGTGTGCAAGGAACC +
Preference number: 2 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFGARRG*HGVQGT
Trigger: GGTTCCTTGCACACCATGGCAGCCTCTCCTTGCACC...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTAGGAAGCCGCCCACGTaGCCTGATGGAGAAAATGGG +
Preference number: 2 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFRKPPT*PDGENG
Trigger: CCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCT...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp GGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTAGTCGCCAGCCCATCATaGCCTGGCAGCTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: GAHPTERILAREPADTLLVASPS*PGSSVC
Trigger: GCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGAC...TAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp CCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCACGGAGGCACGGGTGCTaGTGGCACCTCACTGAAGCT +
Preference number: 2 (lower is better)
Translates to: PPGLRKPPTCPDGENGTPRRHGC*WHLTEA
Trigger: AGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCG...TGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR TCA 90 bp GGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAGAAGACCCCAAGTGGCCTaGATGCTGTGGATCACTTCC +
Preference number: 2 (lower is better)
Translates to: GGRGKRRTLLHSTAPAGRRPQVA*MLWITS
Trigger: GGAAGTGATCCACAGCATTCAGGCCACTTGGGGTCT...TCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATCTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: LGAPPGLRKPPTCPDGENLRRHG*WWHLTE
Trigger: TTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAG...ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp ATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTACCGGCGGCCCCTGTaGGCCTGGGAGCTCCTCCGG +
Preference number: 2 (lower is better)
Translates to: ILAREPADTLLYRNTIVVYRRPL*AWELLR
Trigger: CCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGGTA...GACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp TGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTAAGGAGAGGCTGCCATaGTGTGCAAGGAACCTGGGA +
Preference number: 2 (lower is better)
Translates to: WCPSHREDPGPRAGRHFIKERLP*CARNLG
Trigger: TCCCAGGTTCCTTGCACACCATGGCAGCCTCTCCTT...AATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR TCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTGGCGGCAGTATCCGCTaGAAAAATAGACTGAACTTC +
Preference number: 2 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFGGSIR*KNRLNF
Trigger: GAAGTTCAGTCTATTTTTTCAGCGGATACTGCCGCC...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR TCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCGGCGGCAGTATCCGCTaGAAAAATAGACTGAACTTC +
Preference number: 2 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLGGSIR*KNRLNF
Trigger: GAAGTTCAGTCTATTTTTTCAGCGGATACTGCCGCC...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp TCTTGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGGGCAGCCAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGC +
Preference number: 2 (lower is better)
Translates to: SCFQVSLESGISAQSRAARRGGV*VLVIGG
Trigger: GCCACCTATGACCAGTACCCATACGCCGCCTCGCCT...GGCTGCCCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR GCA 90 bp GACCCCAAGTGGCCTGAATGCTGTGGATCACTTCCTTCTCCCCTTCCACAGTGTCTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAA +
Preference number: 2 (lower is better)
Translates to: DPKWPECCGSLPSPLPQCLRRHG*WWHLTE
Trigger: TTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAG...ACACTGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CCCTCCACCAACCCCCAAGACAGGCAGGAACCGTCTCAGGCTGGCACACAGCAGAAGTTGCAACTTCAGTaGTATGACTGGAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PSTNPQDRQEPSQAGTQQKLQLQ*YDWKGA
Trigger: GGCCCCTTTCCAGTCATAGCACTGAAGTTGCAACTT...CTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGTTGGTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp GATGGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGGATCAACACAAAGATGCCTCCTaGATTCCAGCTCCTCCCGTC +
Preference number: 2 (lower is better)
Translates to: DGWWVDVVRGQPVSPLDQHKDAS*IPAPPV
Trigger: GACGGGAGGAGCTGGAATCCAGGAGGCATCTTTGTG...TTGATCCAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR-3UTR CCA 90 bp CGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 2 (lower is better)
Translates to: REPADTLLYRNTIVVSTGGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...GCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR CCA 90 bp CCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAGTCGCCAGCCCATCATaGCCTGGCAGCTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PQDTMGPRLKRSRLSAVPVASPS*PGSSVC
Trigger: GCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGAC...TGGGACAGCGGAGAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR CCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGGCCACGATGCAGCAGTaGGGACACAAGCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGATMQQ*GHKPEG
Trigger: TCCCTCAGGCTTGTGTCCCCACTGCTGCATCGTGGC...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATAGGAACGCCCCTCACTaGATCCTGTCAGGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: REDPGPRAGRHFIIQKHYRNAPH*ILSGCS
Trigger: GCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCT...ATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR CCA 90 bp CCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGT +
Preference number: 2 (lower is better)
Translates to: PQDTMGPRLKRSRLSAVPGTGHR*PVGTGR
Trigger: ACGCCCAGTACCCACCGGCCACCTATGACCAGTACC...TGGGACAGCGGAGAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR-3UTR TCA 90 bp ATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCGCAACTTCAGTGCTATaGCTGGAAAGGGGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: ILAREPADTLLYRNTIVVATSVL*LERGLW
Trigger: CCAAAGGCCCCTTTCCAGTCATAGCACTGAAGTTGC...GACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR-3UTR GCA 90 bp CGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCAGTCCATTAACTTCTTaGTTTCAGGTTTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: REPADTLLYRNTIVVSTGSPLTS*FQVSLE
Trigger: CTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACT...GCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CAA 90 bp CACAGCTCGGGAGGATCAAGTTACAATAAACAGTCCATTAACTTCTaGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: HSSGGSSYNKQSINF*LSGFPGVRHLCTVQ
Trigger: CTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACTGTTTATTGTAACTTGATCCTCCCGAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 72 bp GCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTGGTaGCCGCGGGTGCTGCGGCTGAGAGGGCCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: AAAAAPGTARKW*PRVLRLRGPGA
Trigger: TGCCCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp CAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTaGTGCCCGCGGGTGCTGCGGCTGAGAGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: QAAAAAPGTARK*CPRVLRLRGPG
Trigger: CCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp GGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACT +
Preference number: 3 (lower is better)
Translates to: GARRQGSCSPRS*QPWQARRRMGT
Trigger: AGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR TCA 72 bp GTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCGGCTaGGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTA +
Preference number: 3 (lower is better)
Translates to: VLHESGARGCCG*EGLGHGGRVAV
Trigger: TACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR TCA 72 bp CGGCGGCCCCTGTGCGCCTGGGAGCTCCTCCGGGCTTaGGGAAGCCGCCCACGTGCCCTGATGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: RRPLCAWELLRA*GSRPRALMEKM
Trigger: CATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 72 bp GGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTaGACTCAACCGCTCCAGCGGGCAGAGCTGAGGGCC +
Preference number: 3 (lower is better)
Translates to: GGAGVEGRGAPF*TQPLQRAELRA
Trigger: GGCCCTCAGCTCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp GGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCACGGCCC +
Preference number: 3 (lower is better)
Translates to: GGWDHHAGLHDG*WVDVVRGQPRP
Trigger: GGGCCGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp CGAGGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTA +
Preference number: 3 (lower is better)
Translates to: RGGVWVLVIGGR*VLGVGRAGRRV
Trigger: TACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR CCA 72 bp GCGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTaGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGC +
Preference number: 3 (lower is better)
Translates to: AECPSGLRRHGC*WHLTEAQPGCR
Trigger: GCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR TCA 72 bp CGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACTaGAGCTCAGCCGGGCTGTCGCCAGCCCATCATGGC +
Preference number: 3 (lower is better)
Translates to: RSSEARVLVAPH*SSAGLSPAHHG
Trigger: GCCATGATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 72 bp TGCATCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTaGACGAAAGTGGTGCCCGCGGGTGCTGCGGCTGAG +
Preference number: 3 (lower is better)
Translates to: CILSGCSCGAWY*TKVVPAGAAAE
Trigger: CTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR GCA 72 bp CAGGCGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGT +
Preference number: 3 (lower is better)
Translates to: QAECPSGLRRHG*WWHLTEAQPGC
Trigger: ACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp GGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCACGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: GWDHHAGLHDGW*VDVVRGQPRPR
Trigger: CCTGGGCCGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp CAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCACG +
Preference number: 3 (lower is better)
Translates to: QGRLGSPRWAAR*LVGRCSAGSAT
Trigger: CGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp AATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTGCACGATGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: NVGRGQRRDRGG*DHHAGLHDGWW
Trigger: CCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR CCA 72 bp CATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCG +
Preference number: 3 (lower is better)
Translates to: HRWPVGTGRRPG*PACTQCRARTA
Trigger: CGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR CCA 72 bp CACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGC +
Preference number: 3 (lower is better)
Translates to: HEAGSRGRRGGV*VLVIGGRWVLG
Trigger: GCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
3UTR CCA 72 bp CCTCACTGCATCCTGTCAGGCTGCAGCTGCGGCGCCTaGTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCG +
Preference number: 3 (lower is better)
Translates to: PHCILSGCSCGA*YCTKVVPAGAA
Trigger: CGCAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
3UTR CCA 72 bp GAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTaGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAG +
Preference number: 3 (lower is better)
Translates to: ECPSGLRRHGCW*HLTEAQPGCRQ
Trigger: CTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp CAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGT +
Preference number: 3 (lower is better)
Translates to: QGRLGSPRWAAR*LVGRCSAGSAR
Trigger: ACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CCA 72 bp ACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCG +
Preference number: 3 (lower is better)
Translates to: TATGQGRLGSPR*AARWLVGRCSA
Trigger: CGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
3UTR TCA 72 bp AGGGAGAGGAGTGTCAACGTCGCAGTGACGGGGTCCTaGGACAACTCACTCTGCCACCCCGGCAGGCGGCAG +
Preference number: 3 (lower is better)
Translates to: RERSVNVAVTGS*DNSLCHPGRRQ
Trigger: CTGCCGCCTGCCGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACTGCGACGTTGACACTCCTCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp CCCCAATGGCAAAGCCCGTCTGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGTTCACGTTGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: PQWQSPSGGSAA*RPDMPGSRWPC
Trigger: GCAAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCATTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CCA 72 bp AGTGCGGGGTCAGCCCGTAAGTCCGCTGGATCAAGGTaGGGTGCAGCTGCTGCACCCCAATGGCAAAGCCCG +
Preference number: 3 (lower is better)
Translates to: SAGSARKSAGSR*GAAAAPQWQSP
Trigger: CGGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTTACGGGCTGACCCCGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CCA 72 bp GGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCG +
Preference number: 3 (lower is better)
Translates to: GWDHHAGLHDGW*VDVVRGQPVSP
Trigger: CGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CCA 72 bp GGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGT +
Preference number: 3 (lower is better)
Translates to: GGWDHHAGLHDG*WVDVVRGQPVS
Trigger: ACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR GCA 72 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTaGCCTGATGGAGAAAATGGGACTCCAACAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LGAPPGLRKPPT*PDGENGTPTGG
Trigger: GCCTCCTGTTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp CACCAACCCCCAAGACAGGCAGGAACCGTCTCAGGCTaGCACACAGCAGGTGGTGCGGGGGTAGAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: HQPPRQAGTVSG*HTAGGAGVEGR
Trigger: TCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGTTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR TCA 72 bp AGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTaGTGGAGAAAATGGGACTCCAACAGGAGGCCGTGT +
Preference number: 3 (lower is better)
Translates to: SSSGLEEAAHVP*WRKWDSNRRPC
Trigger: ACACGGCCTCCTGTTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR TCA 72 bp GGAGGAAGGGAAGGGAGAGGAGTGTCAACGTCGCAGTaGCGGGGTCCTGAGACAACTCACTCTGCCACCCCG +
Preference number: 3 (lower is better)
Translates to: GGREGRGVSTSQ*RGPETTHSATP
Trigger: CGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACTGCGACGTTGACACTCCTCTCCCTTCCCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR GCA 72 bp GCTGTCGCCAGCCCATCATGGCCTGGCAGCTCTGTCTaGTGTGAAGGTGACAATGCCACAGTCCTCGGGGCA +
Preference number: 3 (lower is better)
Translates to: AVASPSWPGSSV*CEGDNATVLGA
Trigger: TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp ACGATGCAGCAGTGGGGACACAAGCCTGAGGGAACCTaGAGTGTGGAGAGGCAGGAGAAGGTGCAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: TMQQWGHKPEGT*SVERQEKVQGE
Trigger: CTCTCCTTGCACCTTCTCCTGCCTCTCCACACTCCAGGTTCCCTCAGGCTTGTGTCCCCACTGCTGCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp CTCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCTaGCCCGCGAGCCGGCAGACACTTTATTATACAGAA +
Preference number: 3 (lower is better)
Translates to: LLSVVPIPPRGS*PASRQTLYYTE
Trigger: TTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CCA 72 bp CATGGTCACCTGGGGCTCTCCCACAAAGATGCCTCCTaGATTCCAGCTCCTCCCGTCAAAGTTCAAGGCCTG +
Preference number: 3 (lower is better)
Translates to: HGHLGLSHKDAS*IPAPPVKVQGL
Trigger: CAGGCCTTGAACTTTGACGGGAGGAGCTGGAATCCAGGAGGCATCTTTGTGGGAGAGCCCCAGGTGACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR TCA 72 bp AGGCTGGCACCACCATGGTCTAGACCCCAAGTGGCCTaGATGCTGTGGATCACTTCCTTCTCCCCTTCCACA +
Preference number: 3 (lower is better)
Translates to: RLAPPWSRPQVA*MLWITSFSPST
Trigger: TGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTCTAGACCATGGTGGTGCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GGGCCTTTGGCCGGCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCTCCTTCTGCGAGCCGTaGATGGCGCCGGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GPLAGGPCYRRPLCAWELSFCEP*MAPGAA
Trigger: GGCCGCCCCCGGCGCCATGCACGGCTCGCAGAAGGA...GAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGCCGGCCAAAGGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356208.10
CDS-3UTR GCA 90 bp ACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGTCCTTCTGCGAGCCGTaGATGGCGCCGGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TATGQGRLGSPRWAARWLSFCEP*MAPGAA
Trigger: GGCCGCCCCCGGCGCCATGCACGGCTCGCAGAAGGA...CAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000440234.6
CDS-3UTR CCA 90 bp CGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGCGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRDRGGWDHHAGLHDGWWRDRGG*DHHAGL
Trigger: CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG...CCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCCTCCGGGCTTGAGGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: AAPVTGGPCAPGSSSGLEVIGGR*VLGVGR
Trigger: CCGGCCTACGCCCAGTACCCACCGGCCACCTATGAC...CTCAAGCCCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GGGCCTTTGGCCGGCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCTGGGGTTCGGGTCTTTaGAAGCCCTCTCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GPLAGGPCYRRPLCAWELWGSGL*KPSQLP
Trigger: CGGCAGCTGAGAGGGCTTGCAAAGACCCGAACCCCA...GAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGCCGGCCAAAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CACGGGTGCTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCATCTACCGGCGGCCCCTGTaGGCCTGGGAGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: HGCWWHLTEAQPGCRQPIYRRPL*AWELLR
Trigger: CCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGGTA...GATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp TGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGTCCTTCTGCGAGCCGTaGATGGCGCCGGGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: WPVGTGRRPGWPACTQCRSFCEP*MAPGAA
Trigger: GGCCGCCCCCGGCGCCATGCACGGCTCGCAGAAGGA...CCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000440234.6
CDS-3UTR CCA 90 bp CGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTGAGGCGTCGGTAGTGTaGTACGGCAGGCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: RQGSCSPRSWQPWQARRREASVV*YGRPPT
Trigger: CGTGGGCGGCCTGCCGTACCACACTACCGACGCCTC...ACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp GGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGCCGCCCGGTCGGCCATaGTCACGAAGCCGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRPGWPACTQCRARTATPPGRP*SRSRSR
Trigger: GCGGCTACGGCTTCGTGACCATGGCCGACCGGGCGG...CGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTCCACCGAGAGGATCCTaGCCCGCGAGCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RQGSCSPRSWQPWQARRRPPRGS*PASRQT
Trigger: TGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGG...ACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp GGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTACGGGGTCAGCCCGTCTaGAGGCTCCGCGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GGRWVLGVGRAGRRVLNVRGQPV*RLRGLA
Trigger: CGCCAAGCCGCGGAGCCTCCAGACGGGCTGACCCCG...TACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS-3UTR TCA 90 bp GTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACGAGCTCCTCCGGGCTTaGGGAAGCCGCCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: VGRAGRRVLNVGRGQRRDELLRA*GSRPRA
Trigger: GGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTC...GTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTACTGCACGAAAGTGGTaGCCGCGGGTGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RQGSCSPRSWQPWQARRRTARKW*PRVLRL
Trigger: CAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGT...ACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp GCCTTTGGCCGGCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCCTGGAGTCAGGCATCTCTaGACAGTCCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFGRRPLLPAAPVRLGAPGVRHL*TVQGSQ
Trigger: CTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTCC...AGGAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGCCGGCCAAAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGTACCGGCGGCCCCTGTaGGCCTGGGAGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RMGTGHRWPVGTGRRPGWYRRPL*AWELLR
Trigger: CCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGGTA...CCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp GCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCGAGGCGTCGGTAGTGTaGTACGGCAGGCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: AGRRVLNVGRGQRRDRGGEASVV*YGRPPT
Trigger: CGTGGGCGGCCTGCCGTACCACACTACCGACGCCTC...GCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGLGHGGRVAVAHEAGSRVIGGR*VLGVGR
Trigger: CCGGCCTACGCCCAGTACCCACCGGCCACCTATGAC...ACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp CGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTGGTACTGCACGAAAGTaGTGCCCGCGGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RQGSCSPRSWQPWQARRRGTARK*CPRVLR
Trigger: CCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACC...ACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp GTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACGAGGCGTCGGTAGTGTaGTACGGCAGGCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: VGRAGRRVLNVGRGQRRDEASVV*YGRPPT
Trigger: CGTGGGCGGCCTGCCGTACCACACTACCGACGCCTC...GTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRRVLNVGRGQRRDRGGWGGSAA*RPDMPG
Trigger: ACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCC...CCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RDRGGWDHHAGLHDGWWVGGSAA*RPDMPG
Trigger: ACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCC...TACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GGCACGGGTGCTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCAATGGCAAAGCCCGTCTaGAGGCTCCGCGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GTGAGGTSLKLSRAVASPMAKPV*RLRGLA
Trigger: CGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCAT...TGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTCCGCTGGATCAAGGTaGGGTGCAGCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: GQRRDRGGWDHHAGLHDGSAGSR*GAAAAP
Trigger: GGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGA...GCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp TGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSPRSWQPWQARRRMGTGRDRGG*DHHAGL
Trigger: CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG...ACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGT +
Preference number: 4 (lower is better)
Translates to: RDRGGWDHHAGLHDGWWVGRRPG*PACTQC
Trigger: ACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC...TACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACGAAGCTGGCAGCCGTaGCAGGCGAGGCGGCGTATG +
Preference number: 4 (lower is better)
Translates to: RRPGWPACTQCRARTATGRSWQP*QARRRM
Trigger: CATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCG...TCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp GACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGCTGGCACACAGCAGGTaGTGCGGGGGTAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: DGTGAAGITTLGCTMAGGLAHSR*CGGRGK
Trigger: CTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAG...CCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp CTGCGGCTGAGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCGGAACCGTCTCAGGCTaGCACACAGCAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LRLRGPGARRQGSCSPRSGTVSG*HTAGGA
Trigger: CGCACCACCTGCTGTGTGCCAGCCTGAGACGGTTCC...GCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp TGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTCCGCCCGGTCGGCCATaGTCACCTGGGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSPRSWQPWQARRRMGTGPPGRP*SPGALP
Trigger: TGGGAGAGCCCCAGGTGACCATGGCCGACCGGGCGG...ACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CAA 72 bp CCGGCGGCCCCTGTGCGCCTGGGAGCTCCTCCGGGCTaGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PAAPVRLGAPPG*RKPPTCPDGEN
Trigger: ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAGGCGCACAGGGGCCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp CTGCGGCTGAGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCGCAGTGACGGGGTCCTaGGACAACTCACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LRLRGPGARRQGSCSPRSAVTGS*DNSLCH
Trigger: GTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACTGC...GCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAAACGTGGTGTCCTTCTaGGAGCCGTGCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RDRGGWDHHAGLHDGWWVNVVSF*EPCMAP
Trigger: CGGCGCCATGCACGGCTCGCAGAAGGACACCACGTT...TACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp CACGGGTGCTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCATCTGCGGCGCCTGGTACTaGACGAAAGTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: HGCWWHLTEAQPGCRQPICGAWY*TKVVPA
Trigger: CGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCA...GATGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGCTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: QRRDRGGWDHHAGLHDGWLRRHG*WWHLTE
Trigger: TTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAG...CCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp GTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGAGGGCGCAGGCGGAATaGCCGAGCGGTCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGVGRAGRRVLNVGRGQRAQAE*PSGLRR
Trigger: CCTCCGAAGACCGCTCGGGCATTCCGCCTGCGCCCT...CTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCAGGGCGCAGGCGGAATaGCCGAGCGGTCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLRAQAE*PSGLRR
Trigger: CCTCCGAAGACCGCTCGGGCATTCCGCCTGCGCCCT...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGATGGCAAAGCCCGTCTaGAGGCTCCGCGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: WPVGTGRRPGWPACTQCRMAKPV*RLRGLA
Trigger: CGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCAT...CCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp CTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTATCCGCTGGATCAAGGTaGGGTGCAGCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: LVIGGRWVLGVGRAGRRVSAGSR*GAAAAP
Trigger: GGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGA...TACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp CCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGWPACTQCRARTATGQGLGSPR*AARWLV
Trigger: CACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAG...CCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp ATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: MGTGHRWPVGTGRRPGWPVIGGR*VLGVGR
Trigger: CCGGCCTACGCCCAGTACCCACCGGCCACCTATGAC...CGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: DGTGAAGITTLGCTMAGGGTGHR*PVGTGR
Trigger: ACGCCCAGTACCCACCGGCCACCTATGACCAGTACC...CCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DGTGAAGITTLGCTMAGGRRGGV*VLVIGG
Trigger: GCCACCTATGACCAGTACCCATACGCCGCCTCGCCT...CCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp CGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RRDRGGWDHHAGLHDGWWRRGGV*VLVIGG
Trigger: GCCACCTATGACCAGTACCCATACGCCGCCTCGCCT...CCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCGAAGCTGGCAGCCGTaGCAGGCGAGGCGGCGTATG +
Preference number: 4 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLRSWQP*QARRRM
Trigger: CATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCG...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGTCGCCAGCCCATCATaGCCTGGCAGCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GRAGRRVLNVGRGQRRDRVASPS*PGSSVC
Trigger: GCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGAC...CCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTCTGGTGGCACCTCACTaGAGCTCAGCCGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLLVAPH*SSAGLS
Trigger: CGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAG...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp TGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCCGCCCACGTGCCCTaGTGGAGAAAATGGGACTCC +
Preference number: 4 (lower is better)
Translates to: WPVGTGRRPGWPACTQCRAAHVP*WRKWDS
Trigger: GGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGC...CCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp CCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCAGAGCTCCTCCGGGCTTaGGGAAGCCGCCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: PPGLRKPPTCPDGENGTPELLRA*GSRPRA
Trigger: GGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTC...TGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGTGGGGTTCGGGTCTTTaGAAGCCCTCTCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGWPACTQCRARTATGQGWGSGL*KPSQLP
Trigger: CGGCAGCTGAGAGGGCTTGCAAAGACCCGAACCCCA...CCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp GTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGAAGGTGGGGTGCAGCTaGTGCACCCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VGRGQRRDRGGWDHHAGLKVGCS*CTPMAK
Trigger: CTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTT...CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR GCA 90 bp GACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGGAGGCTGCCATGGTGTaGAAGGAACCTGGGATTGCG +
Preference number: 4 (lower is better)
Translates to: DGTGAAGITTLGCTMAGGEAAMV*KEPGIA
Trigger: CGCAATCCCAGGTTCCTTGCACACCATGGCAGCCTC...CCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGAAGAGGCGCACCCTTCTaGACTCAACCGCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGVGRAGRRVLNVGRGQRRGAPF*TQPLQR
Trigger: CCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCT...TCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLCSPRS*QPWQAR
Trigger: CCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGCCACGATGCAGCAGTaGGGACACAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RDRGGWDHHAGLHDGWWVATMQQ*GHKPEG
Trigger: TCCCTCAGGCTTGTGTCCCCACTGCTGCATCGTGGC...TACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp GGCACGGGTGCTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCAGCCACGATGCAGCAGTaGGGACACAAGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GTGAGGTSLKLSRAVASPATMQQ*GHKPEG
Trigger: TCCCTCAGGCTTGTGTCCCCACTGCTGCATCGTGGC...TGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTATGGGTACTGGTGGGGCCTCCTGTCTGTaGTGCCCATCCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: CSPRSWQPWQARRRMGTGGASCL*CPSHRE
Trigger: CTCTCGGTGGGATGGGCACCACAGACAGGAGGCCCC...ACCAGTACCCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp CGAGGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCAGCCCTGCCACGGCTaGCAGAACTGCCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: RGGVWVLVIGGRWVLGVGQPCHG*QNCLHP
Trigger: AGGGTGGAGGCAGTTCTGCCAGCCGTGGCAGGGCTG...GCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp CGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCCTTGCGGCCGTCGATaGTGGGGTTCGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RRVLNVGRGQRRDRGGWDPCGRR*WGSGLC
Trigger: GCAAAGACCCGAACCCCATCATCGACGGCCGCAAGG...ATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR TCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCCTTGCGGCCGTCGATaGTGGGGTTCGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLPCGRR*WGSGLC
Trigger: GCAAAGACCCGAACCCCATCATCGACGGCCGCAAGG...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp ACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCAACGTGGTGTCCTTCTaGGAGCCGTGCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: TQCRARTATGQGRLGSPRNVVSF*EPCMAP
Trigger: CGGCGCCATGCACGGCTCGCAGAAGGACACCACGTT...GCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp AGGCTGGCACACAGCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGAACGTGGTGTCCTTCTaGGAGCCGTGCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RLAHSRWCGGRGKRRTLLNVVSF*EPCMAP
Trigger: CGGCGCCATGCACGGCTCGCAGAAGGACACCACGTT...CAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACTGGGGTTCGGGTCTTTaGAAGCCCTCTCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VGRAGRRVLNVGRGQRRDWGSGL*KPSQLP
Trigger: CGGCAGCTGAGAGGGCTTGCAAAGACCCGAACCCCA...GTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTTGCATCCTGTCAGGCTaGAGCTGCGGCGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFCILSG*SCGAWY
Trigger: GTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCA...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GGCACGGGTGCTGGTGGCACCTCACTGAAGCTCAGCCGGGCTGTCGCCAGCCCAGAGGCTGCCATGGTGTaGAAGGAACCTGGGATTGCG +
Preference number: 4 (lower is better)
Translates to: GTGAGGTSLKLSRAVASPEAAMV*KEPGIA
Trigger: CGCAATCCCAGGTTCCTTGCACACCATGGCAGCCTC...TGGGCTGGCGACAGCCCGGCTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGGGTGCAAGGAGAGGCTaGCATGGTGTGCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: PGWPACTQCRARTATGQGGARRG*HGVQGT
Trigger: GGTTCCTTGCACACCATGGCAGCCTCTCCTTGCACC...CCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp AGTGACGGGGTCCTGAGACAACTCACTCTGCCACCCCGGCAGGCGGCAGCAGACGACACCCCGCCACGATaGAGCAGTGGGGACACAAGC +
Preference number: 4 (lower is better)
Translates to: SDGVLRQLTLPPRQAAADDTPPR*SSGDTS
Trigger: GCTTGTGTCCCCACTGCTGCATCGTGGCGGGGTGTC...GTCTGCTGCCGCCTGCCGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp AGGCTGGCACACAGCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGAGAGGCGCACCCTTCTaGACTCAACCGCTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RLAHSRWCGGRGKRRTLLRGAPF*TQPLQR
Trigger: CCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCT...CAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACATGGCAAAGCCCGTCTaGAGGCTCCGCGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: RVLNVGRGQRRDRGGWDHMAKPV*RLRGLA
Trigger: CGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCAT...GTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp ACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCGCTGCTGCACCCCAATaGCAAAGCCCGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TQCRARTATGQGRLGSPRAAAPQ*QSPSGG
Trigger: GCCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGC...GCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp GTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGGCTGCTGCACCCCAATaGCAAAGCCCGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLGVGRAGRRVLNVGRGQAAAPQ*QSPSGG
Trigger: GCCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGC...CTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CCA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTCCGCTGGATCAAGGTaGGGTGCAGCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLSAGSR*GAAAAP
Trigger: GGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGA...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp AGCCCGTCTGGAGGCTCCGCGGCTTGGCGCCCAGATATGCCAGGTTCACGTTGGCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSGGSAAWRPDMPGSRWLGSPR*AARWLV
Trigger: CACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAG...CCAACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CCA 90 bp GGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACACTGGGATCACCACGCTaGGCTGCACGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GTGRRPGWPACTQCRARTLGSPR*AARWLV
Trigger: CACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAG...TGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCGGTCATAGGTGGCCGGTaGGTACTGGGCGTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RLGSPRWAARWLVGRCSAVIGGR*VLGVGR
Trigger: CCGGCCTACGCCCAGTACCCACCGGCCACCTATGAC...CGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp TGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: WPVGTGRRPGWPACTQCRGTGHR*PVGTGR
Trigger: ACGCCCAGTACCCACCGGCCACCTATGACCAGTACC...CCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAAGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: HRWPVGTGRRPGWPACTQGTGHR*PVGTGR
Trigger: ACGCCCAGTACCCACCGGCCACCTATGACCAGTACC...TTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp GCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGAAAGGAGAGGCTGCCATaGTGTGCAAGGAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ARTATGQGRLGSPRWAARKERLP*CARNLG
Trigger: TCCCAGGTTCCTTGCACACCATGGCAGCCTCTCCTT...TCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp CGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCTGGAAAGGGGCCTTTaGCCGGCGGCCCCTGTTACC +
Preference number: 4 (lower is better)
Translates to: RVLNVGRGQRRDRGGWDHLERGL*PAAPVT
Trigger: GGTAACAGGGGCCGCCGGCCAAAGGCCCCTTTCCAG...GTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp CGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCGCCTTGCGGCCGTCGATaGTGGGGTTCGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RLGSPRWAARWLVGRCSAPCGRR*WGSGLC
Trigger: GCAAAGACCCGAACCCCATCATCGACGGCCGCAAGG...CGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR TCA 90 bp GGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAGAGTGGGGACACAAGCCTaGGGGAACCTGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GGRGKRRTLLHSTAPAGRVGTQA*GNLECG
Trigger: TCCACACTCCAGGTTCCCTCAGGCTTGTGTCCCCAC...TCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp GGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAGAGCAGTGACGGGGTCCTaGGACAACTCACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGRGKRRTLLHSTAPAGRAVTGS*DNSLCH
Trigger: GTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACTGC...TCTGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GGCCATGGTCACCTGGGGCTCTCCCACAAAGATGCCTCCTGGATTCCAGCTCCTGCAAGCCCTCTCAGCTaGCGCCCGGTCGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GHGHLGLSHKDASWIPAPASPLS*RPVGHG
Trigger: ACCATGGCCGACCGGGCGGCAGCTGAGAGGGCTTGC...AGGAGCTGGAATCCAGGAGGCATCTTTGTGGGAGAGCCCCAGGTGACCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR GCA 90 bp GGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGCTTGGCGCCCAGATATaGCAGGTTCACGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRRPGWPACTQCRARTATLGAQI*QVHVGL
Trigger: AAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAG...CGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp CGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATGGAGTCAGGCATCTCTaGACAGTCCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRVLNVGRGQRRDRGGWDGVRHL*TVQGSQ
Trigger: CTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTCC...ATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTCCTCACACCTCAGACTaGGCTCACAGCTCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LWCPSHREDPGPRAGRHFPHTSD*AHSSGG
Trigger: TCCTCCCGAGCTGTGAGCGCAGTCTGAGGTGTGAGG...AAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp AAAGCCCGTCTGGAGGCTCCGCGGCTTGGCGCCCAGATATGCCAGGTTCACGTTGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KARLEAPRLGAQICQVHVGGSAA*RPDMPG
Trigger: ACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCC...AACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CCA 90 bp GGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: GGVWVLVIGGRWVLGVGRLHDGW*VDVVRG
Trigger: ACCCCGCACTACATCTACCCACCAGCCATCGTGCAG...CCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 4 (lower is better)
Translates to: RRVLNVGRGQRRDRGGWDGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...ATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 4 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGGTACTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGAGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 4 (lower is better)
Translates to: WVLGVGRAGRRVLNVGRGGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...TCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAGTACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CTGGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: LGVGRAGRRVLNVGRGQRRWAAR*LVGRCS
Trigger: ACTACATCTACCCACCAGCCATCGTGCAGCCCAGCG...TCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGT +
Preference number: 4 (lower is better)
Translates to: LGAPPGLRKPPTCPDGENGRRPG*PACTQC
Trigger: ACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC...ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTGCAGCTGCGGCGCCTaGTACTGCACGAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLCSCGA*YCTKVV
Trigger: CACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCA...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp AGTGACGGGGTCCTGAGACAACTCACTCTGCCACCCCGGCAGGCGGCAGCAGACTGCAGCTGCGGCGCCTaGTACTGCACGAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SDGVLRQLTLPPRQAAADCSCGA*YCTKVV
Trigger: CACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCA...GTCTGCTGCCGCCTGCCGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GCCTTTGGCCGGCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCCTGTTTTGGATTCTTGGTaGCGGCAGTATCCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AFGRRPLLPAAPVRLGAPVLDSW*RQYPLK
Trigger: TTTCAGCGGATACTGCCGCCACCAAGAATCCAAAAC...AGGAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGCCGGCCAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCTGGAGGCTGGCACCACCATaGTCTAGACCCCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RMGTGHRWPVGTGRRPGWRLAPP*SRPQVA
Trigger: GGCCACTTGGGGTCTAGACCATGGTGGTGCCAGCCT...CCAGCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp CGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACTGAAGAGGCTGGCACCACCATaGTCTAGACCCCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RNARAVFGGTGAGGTSLKRLAPP*SRPQVA
Trigger: GGCCACTTGGGGTCTAGACCATGGTGGTGCCAGCCT...CTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCCTCCACCAACCCCCAAGACAGGCAGGAACCGTCTCAGGCTGGCACACAGCAGGGAACCGTCTCAGGCTaGCACACAGCAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: PSTNPQDRQEPSQAGTQQGTVSG*HTAGGA
Trigger: CGCACCACCTGCTGTGTGCCAGCCTGAGACGGTTCC...CTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGTTGGTGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GGGCGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGCACAAAGATGCCTCCTaGATTCCAGCTCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GRRPGWPACTQCRARTATHKDAS*IPAPPV
Trigger: GACGGGAGGAGCTGGAATCCAGGAGGCATCTTTGTG...CGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342690.4
3UTR CAA 72 bp ACCCCAATGGCAAAGCCCGTCTGGAGGCTCCGCGGCTaGGCGCCCAGATATGCCAGGTTCACGTTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPMAKPVWRLRG*APRYARFTLAL
Trigger: CAAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTTTGCCATTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR TCA 90 bp CCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGGCAACTTCAGTGCTATaGCTGGAAAGGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGWPACTQCRARTATGQGATSVL*LERGLW
Trigger: CCAAAGGCCCCTTTCCAGTCATAGCACTGAAGTTGC...CCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp CGGCGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGCAGACCCCAAGTGGCCTaGATGCTGTGGATCACTTCC +
Preference number: 4 (lower is better)
Translates to: RRMGTGHRWPVGTGRRPGRPQVA*MLWITS
Trigger: GGAAGTGATCCACAGCATTCAGGCCACTTGGGGTCT...GCCCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR TCA 90 bp GCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAAGACCCCAAGTGGCCTaGATGCTGTGGATCACTTCC +
Preference number: 4 (lower is better)
Translates to: AGVEGRGAPFCTQPLQRARPQVA*MLWITS
Trigger: GGAAGTGATCCACAGCATTCAGGCCACTTGGGGTCT...TGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp TGGATCAAGGTGGGGTGCAGCTGCTGCACCCCAATGGCAAAGCCCGTCTGGAGGAACGTGGTGTCCTTCTaGGAGCCGTGCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: WIKVGCSCCTPMAKPVWRNVVSF*EPCMAP
Trigger: CGGCGCCATGCACGGCTCGCAGAAGGACACCACGTT...CCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR GCA 90 bp CGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACTGAAGAAGGTGGGGTGCAGCTaGTGCACCCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RNARAVFGGTGAGGTSLKKVGCS*CTPMAK
Trigger: CTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTT...CTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATTGCATCCTGTCAGGCTaGAGCTGCGGCGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LGAPPGLRKPPTCPDGENCILSG*SCGAWY
Trigger: GTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCA...ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GGGCCTTTGGCCGGCGGCCCCTGTTACCGGCGGCCCCTGTGCGCCTGGGAGCTCAGTCCATTAACTTCTTaGTTTCAGGTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GPLAGGPCYRRPLCAWELSPLTS*FQVSLE
Trigger: CTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACT...GAGCTCCCAGGCGCACAGGGGCCGCCGGTAACAGGGGCCGCCGGCCAAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp AGTGACGGGGTCCTGAGACAACTCACTCTGCCACCCCGGCAGGCGGCAGCAGACAGGAAGCCGCCCACGTaGCCTGATGGAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SDGVLRQLTLPPRQAAADRKPPT*PDGENG
Trigger: CCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCT...GTCTGCTGCCGCCTGCCGGGGTGGCAGAGTGAGTTGTCTCAGGACCCCGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTAGGAAGCCGCCCACGTaGCCTGATGGAGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLRKPPT*PDGENG
Trigger: CCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCT...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RRVLNVGRGQRRDRGGWDLHDGW*VDVVRG
Trigger: ACCCCGCACTACATCTACCCACCAGCCATCGTGCAG...ATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CCA 90 bp ACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCCGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: TQCRARTATGQGRLGSPRRWAAR*LVGRCS
Trigger: ACTACATCTACCCACCAGCCATCGTGCAGCCCAGCG...GCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR TCA 90 bp TCCTGTCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGAGCAACTTCAGTGCTATaGCTGGAAAGGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SCLWCPSHREDPGPRAGRATSVL*LERGLW
Trigger: CCAAAGGCCCCTTTCCAGTCATAGCACTGAAGTTGC...TCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp CTGCGGCTGAGAGGGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCGGCGGCAGTATCCGCTaGAAAAATAGACTGAACTTC +
Preference number: 4 (lower is better)
Translates to: LRLRGPGARRQGSCSPRSGGSIR*KNRLNF
Trigger: GAAGTTCAGTCTATTTTTTCAGCGGATACTGCCGCC...GCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCCCTCTCAGCCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CTGGATCAAGGTGGGGTGCAGCTGCTGCACCCCAATGGCAAAGCCCGTCTGGAGTGGGGTTCGGGTCTTTaGAAGCCCTCTCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LDQGGVQLLHPNGKARLEWGSGL*KPSQLP
Trigger: CGGCAGCTGAGAGGGCTTGCAAAGACCCGAACCCCA...CTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR GCA 90 bp ACTCAATGTAGGGCGAGGACAGCGACGGGACAGGGGCGGCTGGGATCACCACGCCTTGGCGCCCAGATATaGCAGGTTCACGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TQCRARTATGQGRLGSPRLGAQI*QVHVGL
Trigger: AAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAG...GCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGCTGTCCTCGCCCTACATTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR GCA 90 bp GGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTAAGGAACGCCCCTCACTaGATCCTGTCAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAHPTERILAREPADTLLRNAPH*ILSGCS
Trigger: GCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCT...TAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCCTCACTGCATCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTGCCTCCTGTCTGTGGTaGCCATCCCACCGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PSLHPVRLQLRRLVLHESASCLW*PSHRED
Trigger: ATCCTCTCGGTGGGATGGGCACCACAGACAGGAGGC...ACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp CAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTGGTGCCCGCGGGTGCTGCCCAAGTGGCCTGAATaGTGTGGATCACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QAAAAAPGTARKWCPRVLPKWPE*CGSLPS
Trigger: AGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGG...CAGCACCCGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp TCTTGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGGGCAGCCGAGGCGTCGGTAGTGTaGTACGGCAGGCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: SCFQVSLESGISAQSRAAEASVV*YGRPPT
Trigger: CGTGGGCGGCCTGCCGTACCACACTACCGACGCCTC...GGCTGCCCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCTTGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGGGCAGCCCGAAGCTGGCAGCCGTaGCAGGCGAGGCGGCGTATG +
Preference number: 4 (lower is better)
Translates to: SCFQVSLESGISAQSRAARSWQP*QARRRM
Trigger: CATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCG...GGCTGCCCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GCCTCCTGGATTCCAGCTCCTCCCGTCAAAGTTCAAGGCCTGGGAAATGTGGCCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ASWIPAPPVKVQGLGNVACSPRS*QPWQAR
Trigger: CCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA...GGCCACATTTCCCAGGCCTTGAACTTTGACGGGAGGAGCTGGAATCCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CCA 90 bp TGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGGCAGTCGCCAGCCCATCATaGCCTGGCAGCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WPGSSVCCEGDNATVLGAVASPS*PGSSVC
Trigger: GCAGACAGAGCTGCCAGGCCATGATGGGCTGGCGAC...TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp AGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTAAAGCCTGAGGGAACCTaGAGTGTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGGWDHHAGLHDGWWVDVKPEGT*SVERQE
Trigger: CTCCTGCCTCTCCACACTCCAGGTTCCCTCAGGCTT...TACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp TGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGGCACTGGCACACAGCAGGTaGTGCGGGGGTAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WPGSSVCCEGDNATVLGALAHSR*CGGRGK
Trigger: CTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAG...TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp GATGGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTAAGTCCGCTGGATCAACCTTGCGGCCGTCGATaGTGGGGTTCGGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: DGWWVDVVRGQPVSPLDQPCGRR*WGSGLC
Trigger: GCAAAGACCCGAACCCCATCATCGACGGCCGCAAGG...TTGATCCAGCGGACTTACGGGCTGACCCCGCACTACATCTACCCACCAGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR TCA 90 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGTGTCAACGTCGCAGTaGCGGGGTCCTGAGACAACT +
Preference number: 4 (lower is better)
Translates to: LGAPPGLRKPPTCPDGENVSTSQ*RGPETT
Trigger: AGTTGTCTCAGGACCCCGTCACTGCGACGTTGACAC...ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCCTCACTGCATCCTGTCAGGCTGCAGCTGCGGCGCCTGGTACTGCACGAAAGTAAGGTGGGGTGCAGCTaGTGCACCCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PSLHPVRLQLRRLVLHESKVGCS*CTPMAK
Trigger: CTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTT...ACTTTCGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAGGATGCAGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR GCA 90 bp TGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGGCACTTCGGAGGCACGGGTaGTGGTGGCACCTCACTGAA +
Preference number: 4 (lower is better)
Translates to: WPGSSVCCEGDNATVLGALRRHG*WWHLTE
Trigger: TTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAG...TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: WCPSHREDPGPRAGRHFILHDGW*VDVVRG
Trigger: ACCCCGCACTACATCTACCCACCAGCCATCGTGCAG...AATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGATCAAGGTGGGGTGCAGCTGCTGCACCCCAATGGCAAAGCCCGTCTGGAGGCGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: WIKVGCSCCTPMAKPVWRRWAAR*LVGRCS
Trigger: ACTACATCTACCCACCAGCCATCGTGCAGCCCAGCG...CCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CCA 90 bp CCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: PPGLRKPPTCPDGENGTPRWAAR*LVGRCS
Trigger: ACTACATCTACCCACCAGCCATCGTGCAGCCCAGCG...TGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCATGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGCTGGGATCACCACGCTaGGCTGCACGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SWPGSSVCCEGDNATVLGLGSPR*AARWLV
Trigger: CACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAG...CCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGRDRGG*DHHAGL
Trigger: CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGGCAAGGCGAGGCGGCGTATaGGTACTGGTCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WPGSSVCCEGDNATVLGARRGGV*VLVIGG
Trigger: GCCACCTATGACCAGTACCCATACGCCGCCTCGCCT...TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCTTGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGGGCAGCCGGTACTGCACGAAAGTaGTGCCCGCGGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SCFQVSLESGISAQSRAAGTARK*CPRVLR
Trigger: CCGCAGCACCCGCGGGCACCACTTTCGTGCAGTACC...GGCTGCCCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCATGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGCGGAGGCACGGGTGCTaGTGGCACCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SWPGSSVCCEGDNATVLGRRHGC*WHLTEA
Trigger: AGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCG...CCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCCTCCACCAACCCCCAAGACAGGCAGGAACCGTCTCAGGCTGGCACACAGCAGAAGGAGAGGCTGCCATaGTGTGCAAGGAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSTNPQDRQEPSQAGTQQKERLP*CARNLG
Trigger: TCCCAGGTTCCTTGCACACCATGGCAGCCTCTCCTT...CTGCTGTGTGCCAGCCTGAGACGGTTCCTGCCTGTCTTGGGGGTTGGTGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CTGGGAGCTCCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATAGGGAACCTGGAGTGTaGAGAGGCAGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGAPPGLRKPPTCPDGENREPGV*RGRRRC
Trigger: GCACCTTCTCCTGCCTCTCCACACTCCAGGTTCCCT...ATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCGGTCTAGACCCCAAGTaGCCTGAATGCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: AGGAGVEGRGAPFCTQPLGLDPK*PECCGS
Trigger: TGATCCACAGCATTCAGGCCACTTGGGGTCTAGACC...GAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GGCCTGGGGCACGGCGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAAGGCCTGGGAAATGTaGCCTTCAAGGACAAAAATA +
Preference number: 4 (lower is better)
Translates to: GLGHGGRVAVAHEAGSRGKAWEM*PSRTKI
Trigger: TATTTTTGTCCTTGAAGGCCACATTTCCCAGGCCTT...GCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCGCCGTGCCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CCA 90 bp TGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAGATGTAGTGCGGGGTTCGGCCATGGTCACCTaGGGCTCTCCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: WDHHAGLHDGWWVDVVRGSAMVT*GSPTKM
Trigger: CATCTTTGTGGGAGAGCCCCAGGTGACCATGGCCGA...ACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR GCA 90 bp GACCCCAAGTGGCCTGAATGCTGTGGATCACTTCCTTCTCCCCTTCCACAGTGTTGCGGCGCCTGGTACTaGACGAAAGTGGTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: DPKWPECCGSLPSPLPQCCGAWY*TKVVPA
Trigger: CGCGGGCACCACTTTCGTGCAGTACCAGGCGCCGCA...ACACTGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp TGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATAGCCTCCTGTCTGTGGTaGCCATCCCACCGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: CPSHREDPGPRAGRHFIIASCLW*PSHRED
Trigger: ATCCTCTCGGTGGGATGGGCACCACAGACAGGAGGC...TATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CGGAATGCCCGAGCGGTCTTCGGAGGCACGGGTGCTGGTGGCACCTCACTGAAGCCCAAGTGGCCTGAATaGTGTGGATCACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RNARAVFGGTGAGGTSLKPKWPE*CGSLPS
Trigger: AGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGG...CTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCGAAGACCGCTCGGGCATTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GACCCCAAGTGGCCTGAATGCTGTGGATCACTTCCTTCTCCCCTTCCACAGTGTGGAGGCTCCGCGGCTTaGCGCCCAGATATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPKWPECCGSLPSPLPQCGGSAA*RPDMPG
Trigger: ACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCC...ACACTGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGGGACAGGGGCGGCTaGGATCACCACGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: REDPGPRAGRHFIIQKHYRDRGG*DHHAGL
Trigger: CAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG...ATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTCTTCAGTGCTATGACTaGAAAGGGGCCTTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: WCPSHREDPGPRAGRHFILQCYD*KGAFGR
Trigger: CCGGCCAAAGGCCCCTTTCCAGTCATAGCACTGAAG...AATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GACCCCAAGTGGCCTGAATGCTGTGGATCACTTCCTTCTCCCCTTCCACAGTGTCAGCCCTGCCACGGCTaGCAGAACTGCCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: DPKWPECCGSLPSPLPQCQPCHG*QNCLHP
Trigger: AGGGTGGAGGCAGTTCTGCCAGCCGTGGCAGGGCTG...ACACTGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGGCTGCAGAGGGTCTGTaGCACCCCGCCACGATGCAG +
Preference number: 4 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGAAEGL*HPATMQ
Trigger: CTGCATCGTGGCGGGGTGTCACAGACCCTCTGCAGC...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp AGGCTGGCACACAGCAGGTGGTGCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGGGCGGCAGTATCCGCTaGAAAAATAGACTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RLAHSRWCGGRGKRRTLLGGSIR*KNRLNF
Trigger: GAAGTTCAGTCTATTTTTTCAGCGGATACTGCCGCC...CAGAAGGGTGCGCCTCTTCCCTCTACCCCCGCACCACCTGCTGTGTGCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp TGGCCTGGCAGCTCTGTCTGCTGTGAAGGTGACAATGCCACAGTCCTCGGGGCACTTGGCGCCCAGATATaGCAGGTTCACGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WPGSSVCCEGDNATVLGALGAQI*QVHVGL
Trigger: AAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAG...TGCCCCGAGGACTGTGGCATTGTCACCTTCACAGCAGACAGAGCTGCCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTGGGTAAGTCCATTAACTTCTTaGTTTCAGGTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RDRGGWDHHAGLHDGWWVSPLTS*FQVSLE
Trigger: CTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACT...TACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGGGGGCCTCCTGTCTGTaGTGCCCATCCCACCGAGAG +
Preference number: 4 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGGASCL*CPSHRE
Trigger: CTCTCGGTGGGATGGGCACCACAGACAGGAGGCCCC...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp CCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAGCTGCAGAGGGTCTGTaGCACCCCGCCACGATGCAG +
Preference number: 4 (lower is better)
Translates to: PQDTMGPRLKRSRLSAVPAAEGL*HPATMQ
Trigger: CTGCATCGTGGCGGGGTGTCACAGACCCTCTGCAGC...TGGGACAGCGGAGAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GCCTCCTGGATTCCAGCTCCTCCCGTCAAAGTTCAAGGCCTGGGAAATGTGGCCCTTGGCGCCCAGATATaGCAGGTTCACGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASWIPAPPVKVQGLGNVALGAQI*QVHVGL
Trigger: AAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAG...GGCCACATTTCCCAGGCCTTGAACTTTGACGGGAGGAGCTGGAATCCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR GCA 90 bp CGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCTGTCAGGCTGCAGCTaGGGCGCCTGGTACTGCACG +
Preference number: 4 (lower is better)
Translates to: REDPGPRAGRHFIIQKHYLSGCS*GAWYCT
Trigger: CGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAG...ATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp TCTTGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGCACAGTCCAGGGCAGCCCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SCFQVSLESGISAQSRAALHDGW*VDVVRG
Trigger: ACCCCGCACTACATCTACCCACCAGCCATCGTGCAG...GGCTGCCCTGGACTGTGCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCGGGCGTAGGCCGGGCTaGCCGGCGTGTACTCAATGT +
Preference number: 4 (lower is better)
Translates to: PADTLLYRNTIVVSTGGTGRRPG*PACTQC
Trigger: ACATTGAGTACACGCCGGCCAGCCCGGCCTACGCCC...GGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp ATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTGTAGCCCACGAAGCTaGCAGCCGTGGCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ILAREPADTLLYRNTIVVCSPRS*QPWQAR
Trigger: CCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACA...GACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCCTGGAAAGGGGCCTTTaGCCGGCGGCCCCTGTTACC +
Preference number: 4 (lower is better)
Translates to: PADTLLYRNTIVVSTGGTLERGL*PAAPVT
Trigger: GGTAACAGGGGCCGCCGGCCAAAGGCCCCTTTCCAG...GGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GACCCCAAGTGGCCTGAATGCTGTGGATCACTTCCTTCTCCCCTTCCACAGTGTGGTGCAAGGAGAGGCTaGCATGGTGTGCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: DPKWPECCGSLPSPLPQCGARRG*HGVQGT
Trigger: GGTTCCTTGCACACCATGGCAGCCTCTCCTTGCACC...ACACTGTGGAAGGGGAGAAGGAAGTGATCCACAGCATTCAGGCCACTTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAGACACCCCGCCACGATaGAGCAGTGGGGACACAAGC +
Preference number: 4 (lower is better)
Translates to: PQDTMGPRLKRSRLSAVPDTPPR*SSGDTS
Trigger: GCTTGTGTCCCCACTGCTGCATCGTGGCGGGGTGTC...TGGGACAGCGGAGAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGGGTACTGGTCATAGGTaGCCGGTGGGTACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGGTGHR*PVGTGR
Trigger: ACGCCCAGTACCCACCGGCCACCTATGACCAGTACC...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCTCCGCTGTCCCAAGGAACGCCCCTCACTaGATCCTGTCAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQDTMGPRLKRSRLSAVPRNAPH*ILSGCS
Trigger: GCTGCAGCCTGACAGGATGCAGTGAGGGGCGTTCCT...TGGGACAGCGGAGAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCAACAAAGTTGCAACTTCAGTaGTATGACTGGAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLRKPPTCPDGENGTPTKLQLQ*YDWKGA
Trigger: GGCCCCTTTCCAGTCATAGCACTGAAGTTGCAACTT...TGTTGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATAGGCACGGGTGCTGGTaGCACCTCACTGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: REDPGPRAGRHFIIQKHYRHGCW*HLTEAQ
Trigger: CTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCT...ATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CCGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGAGGGAACCTGGAGTGTaGAGAGGCAGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRAGRHFIIQKHYRRLHGREPGV*RGRRRC
Trigger: GCACCTTCTCCTGCCTCTCCACACTCCAGGTTCCCT...CCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp CCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCGTGTCAACGTCGCAGTaGCGGGGTCCTGAGACAACT +
Preference number: 4 (lower is better)
Translates to: PADTLLYRNTIVVSTGGTVSTSQ*RGPETT
Trigger: AGTTGTCTCAGGACCCCGTCACTGCGACGTTGACAC...GGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp CGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCCTTCAGTGCTATGACTaGAAAGGGGCCTTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: REPADTLLYRNTIVVSTGLQCYD*KGAFGR
Trigger: CCGGCCAAAGGCCCCTTTCCAGTCATAGCACTGAAG...GCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp GACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAACTGCACGAAAGTGGTaGCCGCGGGTGCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DTLLYRNTIVVSTGGTNKTARKW*PRVLRL
Trigger: CAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGT...TTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR TCA 90 bp GCGCTCACAGCTCGGGAGGATCAAGTTACAATAAACAGTCCATTAACTTCTTGCGTGGGGACACAAGCCTaGGGGAACCTGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALTAREDQVTINSPLTSCVGTQA*GNLECG
Trigger: TCCACACTCCAGGTTCCCTCAGGCTTGTGTCCCCAC...GCAAGAAGTTAATGGACTGTTTATTGTAACTTGATCCTCCCGAGCTGTGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAGCTGCTGCACCCCAATaGCAAAGCCCGTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DTLLYRNTIVVSTGGTNKAAAPQ*QSPSGG
Trigger: GCCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGC...TTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp AGTCTCTCCAAGTCAAAAATAGGTTTTGGATTCTTGGTGGCGGCAGTATCCGCTAGGCACGGGTGCTGGTaGCACCTCACTGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSKSKIGFGFLVAAVSARHGCW*HLTEAQ
Trigger: CTGAGCTTCAGTGAGGTGCCACCAGCACCCGTGCCT...AGCGGATACTGCCGCCACCAAGAATCCAAAACCTATTTTTGACTTGGAGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp ATGGTGTGCAAGGAACCTGGGATTGCGTCTTTAAATAGTTCTCAGTCATTCTTACCACCGAGAGGATCCTaGCCCGCGAGCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: MVCKEPGIASLNSSQSFLPPRGS*PASRQT
Trigger: TGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGG...TAAGAATGACTGAGAACTATTTAAAGACGCAATCCCAGGTTCCTTGCACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp ATGGTGTGCAAGGAACCTGGGATTGCGTCTTTAAATAGTTCTCAGTCATTCTTACTGTCAGGCTGCAGCTaGGGCGCCTGGTACTGCACG +
Preference number: 4 (lower is better)
Translates to: MVCKEPGIASLNSSQSFLLSGCS*GAWYCT
Trigger: CGTGCAGTACCAGGCGCCGCAGCTGCAGCCTGACAG...TAAGAATGACTGAGAACTATTTAAAGACGCAATCCCAGGTTCCTTGCACACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GCGCTCACAGCTCGGGAGGATCAAGTTACAATAAACAGTCCATTAACTTCTTGCCCCTTCCACAGTGTTTaGGGAGTTGGGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALTAREDQVTINSPLTSCPFHSV*GVGEEG
Trigger: CCCTTCCTCCCCAACTCCCCAAACACTGTGGAAGGG...GCAAGAAGTTAATGGACTGTTTATTGTAACTTGATCCTCCCGAGCTGTGAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp ACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAAGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGG +
Preference number: 4 (lower is better)
Translates to: TLYYTETLSSSPRAEPTKGLHDG*WVDVVR
Trigger: CCGCACTACATCTACCCACCAGCCATCGTGCAGCCC...TTTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp ATGGTGTGCAAGGAACCTGGGATTGCGTCTTTAAATAGTTCTCAGTCATTCTTACGGAGGCACGGGTGCTaGTGGCACCTCACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: MVCKEPGIASLNSSQSFLRRHGC*WHLTEA
Trigger: AGCTTCAGTGAGGTGCCACCAGCACCCGTGCCTCCG...TAAGAATGACTGAGAACTATTTAAAGACGCAATCCCAGGTTCCTTGCACACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp GACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAAAGCCTGAGGGAACCTaGAGTGTGGAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DTLLYRNTIVVSTGGTNKKPEGT*SVERQE
Trigger: CTCCTGCCTCTCCACACTCCAGGTTCCCTCAGGCTT...TTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR GCA 90 bp CTTAAAGTCCTCCCTCAAGACACAATGGGACCTAGATTAAAGAGAAGCCGTCTCAAGTTGCAACTTCAGTaGTATGACTGGAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LKVLPQDTMGPRLKRSRLKLQLQ*YDWKGA
Trigger: GGCCCCTTTCCAGTCATAGCACTGAAGTTGCAACTT...GAGACGGCTTCTCTTTAATCTAGGTCCCATTGTGTCTTGAGGGAGGACTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CCA 90 bp ACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAAGGTCTAGACCCCAAGTaGCCTGAATGCTGTGGATCA +
Preference number: 4 (lower is better)
Translates to: TLYYTETLSSSPRAEPTKGLDPK*PECCGS
Trigger: TGATCCACAGCATTCAGGCCACTTGGGGTCTAGACC...TTTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
3UTR CAA 72 bp GGAGGATCAAGTTACAATAAACAGTCCATTAACTTCTaGCTTTCAGGTTTCCCTGGAGTCAGGCATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSSYNKQSINF*LSGFPGVRHLC
Trigger: GCAGAGATGCCTGACTCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACTGTTTATTGTAACTTGATCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS CCA 90 bp GACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCCGTCTGGAGGCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: DRGGWDHHAGLHDGW*VDVVRGQPVWRLRG
Trigger: GCCGCGGAGCCTCCAGACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCCGTCTGGAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RDRGGWDHHAGLHDG*WVDVVRGQPVWRLR
Trigger: GCGGAGCCTCCAGACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS-3UTR CAA 90 bp GGCGGCGTATGGGTACTGGTCATAGGTGGCCGGTGGGTACTGGGCGTAGGCCGGGGAGCTCCTCCGGGCTaGAGGAAGCCGCCCACGTGC +
Preference number: 5 (lower is better)
Translates to: GGVWVLVIGGRWVLGVGRGAPPG*RKPPTC
Trigger: GCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCC...CCGGCCTACGCCCAGTACCCACCGGCCACCTATGACCAGTACCCATACGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS CCA 90 bp CGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCACGGCCCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: RDRGGWDHHAGLHDG*WVDVVRGQPRPRRT
Trigger: AGTCCTCCTGGGCCGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS CCA 90 bp GCGACGGGACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATaGCTGGTGGGTAGATGTAGTGCGGGGTCAGCCCGTCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: ATGQGRLGSPRWAAR*LVGRCSAGSARLEA
Trigger: AGCCTCCAGACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTCCCGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS-3UTR CAA 90 bp TCTGTGGTGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTGGAGCTCCTCCGGGCTaGAGGAAGCCGCCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SVVPIPPRGSWPASRQTLGAPPG*RKPPTC
Trigger: GCACGTGGGCGGCTTCCTCAAGCCCGGAGGAGCTCC...AAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCACCACAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS CCA 90 bp GACAGGGGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCACGGCCCAGGAGGACTCAT +
Preference number: 5 (lower is better)
Translates to: DRGGWDHHAGLHDGW*VDVVRGQPRPRRTH
Trigger: ATGAGTCCTCCTGGGCCGTGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CAA 90 bp CGGCAGGGTAGCTGTAGCCCACGAAGCTGGCAGCCGTGGCAGGCGAGGCGGCGTCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RQGSCSPRSWQPWQARRRPPTKI*VNVVSF
Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...ACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGGCTACAGCTACCCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342690.4
ENST00000344785.10
CDS-3UTR CAA 90 bp TGGATCAAGGTGGGGTGCAGCTGCTGCACCCCAATGGCAAAGCCCGTCTGGAGGTGGAGGCTCCGCGGCTaGGCGCCCAGATATGCCAGG +
Preference number: 5 (lower is better)
Translates to: WIKVGCSCCTPMAKPVWRWRLRG*APRYAR
Trigger: CCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCA...CCTCCAGACGGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS-3UTR CAA 90 bp GTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGACCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VGRAGRRVLNVGRGQRRDPPTKI*VNVVSF
Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...GTCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342690.4
ENST00000344785.10
ENST00000440234.6
CDS-3UTR CAA 90 bp CGTAGGCCGGGCTGGCCGGCGTGTACTCAATGTAGGGCGAGGACAGCGACGGGAATAGGTTTTGGATTCTaGGTGGCGGCAGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: RRPGWPACTQCRARTATGIGFGF*VAAVSA
Trigger: AGCGGATACTGCCGCCACCAAGAATCCAAAACCTAT...TCCCGTCGCTGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344785.10
CDS-3UTR CAA 90 bp GCGGGGGTAGAGGGAAGAGGCGCACCCTTCTGCACTCAACCGCTCCAGCGGGCAATAGGTTTTGGATTCTaGGTGGCGGCAGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: AGVEGRGAPFCTQPLQRAIGFGF*VAAVSA
Trigger: AGCGGATACTGCCGCCACCAAGAATCCAAAACCTAT...TGCCCGCTGGAGCGGTTGAGTGCAGAAGGGTGCGCCTCTTCCCTCTACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CAA 90 bp TGCCCATCCCACCGAGAGGATCCTGGCCCGCGAGCCGGCAGACACTTTATTATACCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CPSHREDPGPRAGRHFIIPPTKI*VNVVSF
Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...TATAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGGTGGGATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CAA 90 bp CGCGAGCCGGCAGACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCCCGCCCACGAAGATCTaGGTGAACGTGGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: REPADTLLYRNTIVVSTGPPTKI*VNVVSF
Trigger: GAAGGACACCACGTTCACCAAGATCTTCGTGGGCGG...GCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGTCTGCCGGCTCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS-3UTR CAA 90 bp CCTCCGGGCTTGAGGAAGCCGCCCACGTGCCCTGATGGAGAAAATGGGACTCCACAGTCCATTAACTTCTaGCTTTCAGGTTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPGLRKPPTCPDGENGTPQSINF*LSGFPG
Trigger: TCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACTG...TGGAGTCCCATTTTCTCCATCAGGGCACGTGGGCGGCTTCCTCAAGCCCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS CCA 90 bp CCTGGATTCCAGCTCCTCCCGTCAAAGTTCAAGGCCTGGGAAATGTaGCCTTCAAGGACAAAAATAATCCCCCGTCTGGCGGTCGGTGAT +
Preference number: 5 (lower is better)
Translates to: PGFQLLPSKFKAWEM*PSRTKIIPRLAVGD
Trigger: ATCACCGACCGCCAGACGGGGGATTATTTTTGTCCTTGAAGGCCACATTTCCCAGGCCTTGAACTTTGACGGGAGGAGCTGGAATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342690.4
CDS CCA 90 bp GAGGGCCGAGACTTTCCTCTGAGAAGGAGTTTGCGACGCTATGCTTaGAAGGTAAGCAGGAAAGTGTCTTCAAGACGTTTTTACTTAAGC +
Preference number: 5 (lower is better)
Translates to: EGRDFPLRRSLRRYA*KVSRKVSSRRFYLS
Trigger: GCTTAAGTAAAAACGTCTTGAAGACACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTCTCGGCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371219.2
CDS-3UTR CAA 90 bp ACACTTTATTATACAGAAACACTATCGTCGTCTCCACGGGCGGAACCAACAAAACAGTCCATTAACTTCTaGCTTTCAGGTTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: TLYYTETLSSSPRAEPTKQSINF*LSGFPG
Trigger: TCCAGGGAAACCTGAAAGCAAGAAGTTAATGGACTG...TTTTGTTGGTTCCGCCCGTGGAGACGACGATAGTGTTTCTGTATAATAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344785.10
ENST00000356208.10
CDS CCA 72 bp GGCGGCTGGGATCACCACGCTGGGCTGCACGATGGCTaGTGGGTAGATGTAGTGCGGGGTCAGCCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: GGWDHHAGLHDG*WVDVVRGQPVW
Trigger: CCAGACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS CCA 72 bp GGCTGGGATCACCACGCTGGGCTGCACGATGGCTGGTaGGTAGATGTAGTGCGGGGTCAGCCCGTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GWDHHAGLHDGW*VDVVRGQPVWR
Trigger: CCTCCAGACGGGCTGACCCCGCACTACATCTACCCACCAGCCATCGTGCAGCCCAGCGTGGTGATCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS CAA 72 bp GTAGTGCGGGGTCAGCCCGTCTGGAGGCTCCGCGGCTaGGCGCCCAGATATGCCAGGTTCACGTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: VVRGQPVWRLRG*APRYARFTLAL
Trigger: CAAGGCCAACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGCTGACCCCGCACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440234.6
CDS CAA 72 bp ACCAGTGAGGGCCGAGACTTTCCTCTGAGAAGGAGTTaGCGACGCTATGCTTGGAAGGTAAGCAGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: TSEGRDFPLRRS*RRYAWKVSRKV
Trigger: CACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTCTCGGCCCTCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371219.2
CDS CAA 90 bp GACTTGCCCACCAGTGAGGGCCGAGACTTTCCTCTGAGAAGGAGTTaGCGACGCTATGCTTGGAAGGTAAGCAGGAAAGTGTCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: DLPTSEGRDFPLRRS*RRYAWKVSRKVSSR
Trigger: TCTTGAAGACACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTCTCGGCCCTCACTGGTGGGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371219.2
CDS GCA 72 bp CCGAGACTTTCCTCTGAGAAGGAGTTTGCGACGCTATaGTTGGAAGGTAAGCAGGAAAGTGTCTTCAAGACG +
Preference number: 6 (lower is better)
Translates to: PRLSSEKEFATL*LEGKQESVFKT
Trigger: CGTCTTGAAGACACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTCTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371219.2
CDS CCA 72 bp GACTTTCCTCTGAGAAGGAGTTTGCGACGCTATGCTTaGAAGGTAAGCAGGAAAGTGTCTTCAAGACGTTTT +
Preference number: 6 (lower is better)
Translates to: DFPLRRSLRRYA*KVSRKVSSRRF
Trigger: AAAACGTCTTGAAGACACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371219.2
CDS CAA 72 bp AGACTTTCCTCTGAGAAGGAGTTTGCGACGCTATGCTaGGAAGGTAAGCAGGAAAGTGTCTTCAAGACGTTT +
Preference number: 6 (lower is better)
Translates to: RLSSEKEFATLC*EGKQESVFKTF
Trigger: AAACGTCTTGAAGACACTTTCCTGCTTACCTTCCAAGCATAGCGTCGCAAACTCCTTCTCAGAGGAAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371219.2