RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM33 (Homo sapiens)

Ensembl gene IDs: ENSG00000184863

Ensembl transcript IDs: ENST00000287912.7, ENST00000307403.6, ENST00000341148.7, ENST00000392755.2, ENST00000392759.7, ENST00000392761.3, ENST00000401878.8, ENST00000438356.1, ENST00000440108.5, ENST00000486747.1

Found 1081 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCATCAAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTaGTGCTGGTGCTGCGGCGGGTGCTGTGGTGGGTGCTGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: GIKGGGGTDRWWWWW*CWCCGGCCGGCWGG
Trigger: CCCACCCCAGCACCCACCACAGCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTTGATGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp GCTCTCCCAGTCAACACAGCTTCGCCCCCAACCAGAGCCACCCGGTaGAGCCCGCAGAGTGTACACGCATCAGGGCCGGGAGGCCCCGTC +
Preference number: 1 (lower is better)
Translates to: ALPVNTASPPTRATR*SPQSVHASGPGGPV
Trigger: GACGGGGCCTCCCGGCCCTGATGCGTGTACACTCTGCGGGCTGCACCGGGTGGCTCTGGTTGGGGGCGAAGCTGTGTTGACTGGGAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp ATCGGCATCAAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTaGTGGTGCTGGTGCTGCGGCGGGTGCTGTGGTGGGTGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: IGIKGGGGTDRWWWW*WCWCCGGCCGGCWG
Trigger: ACCCCAGCACCCACCACAGCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTTGATGCCGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp GACATCGGCATCAAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTaGTGGTGGTGCTGGTGCTGCGGCGGGTGCTGTGGTGGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: DIGIKGGGGTDRWWW*WWCWCCGGCCGGCW
Trigger: CCAGCACCCACCACAGCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTTGATGCCGATGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp TATTATGCCGGAGCCCCTGGCGCTGGGGGCACTGCATCCGGCTGCTaGTGGCCTGAGGCTGAGCGGTCTGTACGTGAGGCCGGAACTGTG +
Preference number: 1 (lower is better)
Translates to: YYAGAPGAGGTASGC*WPEAERSVREAGTV
Trigger: CACAGTTCCGGCCTCACGTACAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGCATAATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CTCCTCCAGGCCATCCAGCGGATGCCCCTGTGCCGCCAAACACCCTaGCCCAAGGGCTCTCAACTCCACCGACCGGACTGGATGACCTCC +
Preference number: 1 (lower is better)
Translates to: LLQAIQRMPLCRQTP*PKGSQLHRPDWMTS
Trigger: GGAGGTCATCCAGTCCGGTCGGTGGAGTTGAGAGCCCTTGGGCCAGGGTGTTTGGCGGCACAGGGGCATCCGCTGGATGGCCTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp TTGTATTATGCCGGAGCCCCTGGCGCTGGGGGCACTGCATCCGGCTaGTGCTGGCCTGAGGCTGAGCGGTCTGTACGTGAGGCCGGAACT +
Preference number: 1 (lower is better)
Translates to: LYYAGAPGAGGTASG*CWPEAERSVREAGT
Trigger: AGTTCCGGCCTCACGTACAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGCATAATACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp GCTGCTGGCCTGAGGCTGAGCGGTCTGTACGTGAGGCCGGAACTGTaGCTGAGACATCGGCATCAAAGGAGGGGGCGGGACGGACAGGTG +
Preference number: 1 (lower is better)
Translates to: AAGLRLSGLYVRPEL*LRHRHQRRGRDGQV
Trigger: CACCTGTCCGTCCCGCCCCCTCCTTTGATGCCGATGTCTCAGCCACAGTTCCGGCCTCACGTACAGACCGCTCAGCCTCAGGCCAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 90 bp CAGGACAAGGCTCCAGGGCCTCGGGGGTCCCTCACCTGCCCTACCTaGACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCC +
Preference number: 1 (lower is better)
Translates to: QDKAPGPRGSLTCPT*TVPADHHPVKTFPS
Trigger: GGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGTTCAGGTAGGGCAGGTGAGGGACCCCCGAGGCCCTGGAGCCTTGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GACCCAGGCTGGCTAAAGTGCAGAATCCCCACCGGACCTGGAGGCTaGAAGGCTGGTCGTACGGGCCGCTCTCTTGGGAACACTGGCTGC +
Preference number: 1 (lower is better)
Translates to: DPGWLKCRIPTGPGG*KAGRTGRSLGNTGC
Trigger: GCAGCCAGTGTTCCCAAGAGAGCGGCCCGTACGACCAGCCTTGCAGCCTCCAGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp TCTTCCTGCTCTGCTGGGGGTGGGGGAGCGTACAGCTGCTGCTGTTaGTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCC +
Preference number: 1 (lower is better)
Translates to: SSCSAGGGGAYSCCC*CASLSSSSFFLAPA
Trigger: GGCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCCACCCCCAGCAGAGCAGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp GCCTGCTCTTCCTGCTCTGCTGGGGGTGGGGGAGCGTACAGCTGCTaGTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: ACSSCSAGGGGAYSC*CCCASLSSSSFFLA
Trigger: TGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCCACCCCCAGCAGAGCAGGAAGAGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp GTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTACGCAGGACAGCGGCCCGGAGAGAC +
Preference number: 1 (lower is better)
Translates to: VSCQFGSSGIRPVAG*RSGEQLRRTAARRD
Trigger: GTCTCTCCGGGCCGCTGTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp TGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACAGTTACGCAGGACAGCGGCCCGGAG +
Preference number: 1 (lower is better)
Translates to: CCVLSVRLLWNQARG*LALWRTVTQDSGPE
Trigger: CTCCGGGCCGCTGTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp AGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAGAACAGTTACGCAGGACAGCGGCCC +
Preference number: 1 (lower is better)
Translates to: SLLCPVSSAPLESGP*LAGALENSYAGQRP
Trigger: GGGCCGCTGTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp AAAGCCACCCTCACCCCGCATGCCACGGGGAACGGCAGGCCAGAGTaGACATCCGCTGATGAACAGGGCAGCCCTGCTGGAACAGCCTTC +
Preference number: 1 (lower is better)
Translates to: KATLTPHATGNGRPE*TSADEQGSPAGTAF
Trigger: GAAGGCTGTTCCAGCAGGGCTGCCCTGTTCATCAGCGGATGTTCACTCTGGCCTGCCGTTCCCCGTGGCATGCGGGGTGAGGGTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GGAGGAATGAAGGGCCGTGTGGTTGCCGACCCAGGCTGGCTAAAGTaGAGAATCCCCACCGGACCTGGAGGCTGCAAGGCTGGTCGTACG +
Preference number: 1 (lower is better)
Translates to: GGMKGRVVADPGWLK*RIPTGPGGCKAGRT
Trigger: CGTACGACCAGCCTTGCAGCCTCCAGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAACCACACGGCCCTTCATTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp AGTGCCTGCTCTTCCTGCTCTGCTGGGGGTGGGGGAGCGTACAGCTaGTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: SACSSCSAGGGGAYS*CCCCASLSSSSFFL
Trigger: CAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCCACCCCCAGCAGAGCAGGAAGAGCAGGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 90 bp AGGCTGAGGCGGAGCAGAGTGGCAGGAATACGGCCCTCACCCAGTTaGAGCCAGGAGGTGGAGGGAGAGGAGCATGGAAAGCCAGGGAGA +
Preference number: 1 (lower is better)
Translates to: RLRRSRVAGIRPSPS*SQEVEGEEHGKPGR
Trigger: TCTCCCTGGCTTTCCATGCTCCTCTCCCTCCACCTCCTGGCTTCAACTGGGTGAGGGCCGTATTCCTGCCACTCTGCTCCGCCTCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp GGCTGTCTAGGAGGAATGAAGGGCCGTGTGGTTGCCGACCCAGGCTaGCTAAAGTGCAGAATCCCCACCGGACCTGGAGGCTGCAAGGCT +
Preference number: 1 (lower is better)
Translates to: GCLGGMKGRVVADPG*LKCRIPTGPGGCKA
Trigger: AGCCTTGCAGCCTCCAGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAACCACACGGCCCTTCATTCCTCCTAGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CAGGTTGGGCTGTGTGTGTGTGGGCAGAAACGGCTGTCCTGGGCCTaGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTGGTTGC +
Preference number: 1 (lower is better)
Translates to: QVGLCVCGQKRLSWA*QERLSRRNEGPCGC
Trigger: GCAACCACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTGCCCACACACACACAGCCCAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp TTTGTCCTGTGCGTGACAGTCCTTTTCACGCCAGGCTTTGTGTCCTaGGGCCGGCCCTGGATGGACGCCACTCGAGGAGTCTGGGGGACA +
Preference number: 1 (lower is better)
Translates to: FVLCVTVLFTPGFVS*GRPWMDATRGVWGT
Trigger: TGTCCCCCAGACTCCTCGAGTGGCGTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGGCGTGAAAAGGACTGTCACGCACAGGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp GCTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTaGCACCAGCCTGCTGCTGCCGCCGTAACTCCTTCTGTTTCAGGA +
Preference number: 1 (lower is better)
Translates to: AAAVAARVSPAAPSS*HQPAAAAVTPSVSG
Trigger: TCCTGAAACAGAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CAATCCCATCTTCCGAGGGTTGGCTGGGACACTCTGGAGCAGAGGTaGCGGCAGCACAGCTGCAGGGTCCTAGCAGATCCTACAAGCGCT +
Preference number: 1 (lower is better)
Translates to: QSHLPRVGWDTLEQR*RQHSCRVLADPTSA
Trigger: AGCGCTTGTAGGATCTGCTAGGACCCTGCAGCTGTGCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAACCCTCGGAAGATGGGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp CAAGAGCTCCTGCGAAAGCAGAGGGGCGGGAAACAAAGAAGCGGGTaGTTAAGGGCACGAACCGCACACTGCGGGACGCCGGCATCTTTG +
Preference number: 1 (lower is better)
Translates to: QELLRKQRGGKQRSG*LRARTAHCGTPASL
Trigger: CAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGCCCTTAACCACCCGCTTCTTTGTTTCCCGCCCCTCTGCTTTCGCAGGAGCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GGCGGGAAACAAAGAAGCGGGTGGTTAAGGGCACGAACCGCACACTaGGGGACGCCGGCATCTTTGAATCGCCACTCACTCCTACAGAGC +
Preference number: 1 (lower is better)
Translates to: GGKQRSGWLRARTAH*GTPASLNRHSLLQS
Trigger: GCTCTGTAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGCCCTTAACCACCCGCTTCTTTGTTTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp CTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGGCTGGCGCTCTGGAGAACAGTTACG +
Preference number: 1 (lower is better)
Translates to: LTPTPACCVLSVRLL*NQARGWLALWRTVT
Trigger: CGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp AGAGACCTGTGCTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTaGAGAAATTCCACAGTGTGTGTACAGCCTAAGGTCAGGCTCTCT +
Preference number: 1 (lower is better)
Translates to: RDLCSWGFCAGRQLP*RNSTVCVQPKVRLS
Trigger: AGAGAGCCTGACCTTAGGCTGTACACACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCACAGGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp TGCAGGGTCCTAGCAGATCCTACAAGCGCTGTGGCTTCCTGGGACTaGCTGCTGCAACAGCCCCTGCAGCGTGCAGTGTTACTCTCAAGC +
Preference number: 1 (lower is better)
Translates to: CRVLADPTSAVASWD*LLQQPLQRAVLLSS
Trigger: GCTTGAGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAGGATCTGCTAGGACCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp AGTCGTGGGGGCTGGCTGAAACTGTTGGGAACAGGTCCAGGTGTATaGTGTGGAAATTCTGGAGGGCCTGGGAATCTCTGGGGTCCCACG +
Preference number: 1 (lower is better)
Translates to: SRGGWLKLLGTGPGV*CGNSGGPGNLWGPT
Trigger: CGTGGGACCCCAGAGATTCCCAGGCCCTCCAGAATTTCCACAGCATACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp ACCACCGTCCCTTTGAAGTGCGGGTTGATGTGTATGTTCTTGGGCTaGTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTGGGGTC +
Preference number: 1 (lower is better)
Translates to: TTVPLKCGLMCMFLG*CGVTGGGVIIILGV
Trigger: GACCCCAAGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACACATCAACCCGCACTTCAAAGGGACGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp AGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCTTTCCTaGCCTGCACACACTCCTATCAGTCAACTCCCTGGTAGAATCGTC +
Preference number: 1 (lower is better)
Translates to: SGFPSGGSRVPPNLS*PAHTPISQLPGRIV
Trigger: GACGATTCTACCAGGGAGTTGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp CCTAGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTaGCTCCGAACCTTTCCTGCCCTGCACACACTCCTATCAGTCAAC +
Preference number: 1 (lower is better)
Translates to: PSRSGLAAFRVVVVG*LRTFPALHTLLSVN
Trigger: GTTGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp CTTACCCCACCTGACAGCTTAATCACCCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCACTGTTTGTCCTGTGCGTGACAGTC +
Preference number: 1 (lower is better)
Translates to: LTPPDSLITLTLELM*GPSPPPLFVLCVTV
Trigger: GACTGTCACGCACAGGACAAACAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 90 bp AATCTTGGTTCACCTGAAACTCCTAAGAAGAAAGGGTCTCGATCCTaGGGCGGGGGTGGGGCTCTCCACTGGTCCTGGAGAGGGAGTCGT +
Preference number: 1 (lower is better)
Translates to: NLGSPETPKKKGSRS*GGGGALHWSWRGSR
Trigger: ACGACTCCCTCTCCAGGACCAGTGGAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTTCTTCTTAGGAGTTTCAGGTGAACCAAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp TGCTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCATGGGCCGCTTaGTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCT +
Preference number: 1 (lower is better)
Translates to: CCSLAQWAAFAAWAA*LHSEKLYYAGAPGA
Trigger: AGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp CTACAAGCGCTGTGGCTTCCTGGGACTGACTGCTGCAACAGCCCCTaGAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTT +
Preference number: 1 (lower is better)
Translates to: LQALWLPGTDCCNSP*SVQCYSQAHSKRHF
Trigger: AAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp CAAAGCAGTAACACACGGTCAGACGGCCGCCACCTCCAAGTGGAGTaGGCCACGCTACCACTAACACTGAACTCAAGCACAAGAGCTCCT +
Preference number: 1 (lower is better)
Translates to: QSSNTRSDGRHLQVE*ATLPLTLNSSTRAP
Trigger: AGGAGCTCTTGTGCTTGAGTTCAGTGTTAGTGGTAGCGTGGCTCACTCCACTTGGAGGTGGCGGCCGTCTGACCGTGTGTTACTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GGTGAGGCCATCACAGACCCTGCTCTAGCCGAGGGCCATGCCGTGTaGCTGTCCAGCACATTGCCTTATCTGGGAAGTGTGTTAAAAATG +
Preference number: 1 (lower is better)
Translates to: GEAITDPALAEGHAV*LSSTLPYLGSVLKM
Trigger: CATTTTTAACACACTTCCCAGATAAGGCAATGTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGAGCAGGGTCTGTGATGGCCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp CGCTGTGGCTTCCTGGGACTGACTGCTGCAACAGCCCCTGCAGCGTaGAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCA +
Preference number: 1 (lower is better)
Translates to: RCGFLGLTAATAPAA*SVTLKHTANATLES
Trigger: TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp CAGAGCAGCGGCTGCTGCTCATTTCTATCACGTGTGACGGCGCTATaGGTAATTCACGCAAATTGCTGTTCCTTGGCGCAGTGGGCTGCA +
Preference number: 1 (lower is better)
Translates to: QSSGCCSFLSRVTAL*VIHANCCSLAQWAA
Trigger: TGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGATAGAAATGAGCAGCAGCCGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CTGTTGCTGAGGTTGCTGAGGCTGAGGCTGATGCGGAGGGGGCAATaGAGGATGCAACGGCCCCTTCCATTTCCAAAGAAAGAGAAACAA +
Preference number: 1 (lower is better)
Translates to: LLLRLLRLRLMRRGQ*RMQRPLPFPKKEKQ
Trigger: TTGTTTCTCTTTCTTTGGAAATGGAAGGGGCCGTTGCATCCTCCATTGCCCCCTCCGCATCAGCCTCAGCCTCAGCAACCTCAGCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp TCATTTCTATCACGTGTGACGGCGCTATGGGTAATTCACGCAAATTaGTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCATGGGCCGCT +
Preference number: 1 (lower is better)
Translates to: SFLSRVTALWVIHAN*CSLAQWAAFAAWAA
Trigger: AGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGATAGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CACGCAAATTGCTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCATaGGCCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCC +
Preference number: 1 (lower is better)
Translates to: HANCCSLAQWAAFAA*AACLHSEKLYYAGA
Trigger: GGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp ACGGCGCTATGGGTAATTCACGCAAATTGCTGTTCCTTGGCGCAGTaGGCTGCATTTGCTGCATGGGCCGCTTGCTTACATTCTGAGAAG +
Preference number: 1 (lower is better)
Translates to: TALWVIHANCCSLAQ*AAFAAWAACLHSEK
Trigger: CTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 90 bp AAACACCCTGGCCCAAGGGCTCTCAACTCCACCGACCGGACTGGATaGCCTCCCCTGATAAGCCAGTGTGTTAGAAGCAAGTTGATTATT +
Preference number: 1 (lower is better)
Translates to: KHPGPRALNSTDRTG*PPLISQCVRSKLII
Trigger: AATAATCAACTTGCTTCTAACACACTGGCTTATCAGGGGAGGTCATCCAGTCCGGTCGGTGGAGTTGAGAGCCCTTGGGCCAGGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp ATGCTGCCATCACACACGCTGACCTCCTTGTCCTGTGCAATTACATaGCTAGGACCTGCCTTCGACAAGCGTCTGATGGTCTATGAGCAC +
Preference number: 1 (lower is better)
Translates to: MLPSHTLTSLSCAIT*LGPAFDKRLMVYEH
Trigger: GTGCTCATAGACCATCAGACGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGCGTGTGTGATGGCAGCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp TGCTCCTTCGGCTCAGGGCACCCCTGTGTGCTGTGCGCGCGTTATTaGAAATGTTACCCACCTAAGAAAAGACTACAGAACGCATACAGC +
Preference number: 1 (lower is better)
Translates to: CSFGSGHPCVLCARY*KCYPPKKRLQNAYS
Trigger: GCTGTATGCGTTCTGTAGTCTTTTCTTAGGTGGGTAACATTTTCAATAACGCGCGCACAGCACACAGGGGTGCCCTGAGCCGAAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GAACACAGAGTTGACGCTTTTGAAACAGTGACAAGAAGCAGAATCTaGTGTTCAACTGGCACCACTCCCAACCACCCCACTCACACCCTG +
Preference number: 1 (lower is better)
Translates to: EHRVDAFETVTRSRI*CSTGTTPNHPTHTL
Trigger: CAGGGTGTGAGTGGGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGATTCTGCTTCTTGTCACTGTTTCAAAAGCGTCAACTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp TCTGCTGTTCAACTGGCACCACTCCCAACCACCCCACTCACACCCTaGCTTTCCAGGGTATGCAAAGGTCAATCAACAATCACCCAAATT +
Preference number: 1 (lower is better)
Translates to: SAVQLAPLPTTPLTP*LSRVCKGQSTITQI
Trigger: AATTTGGGTGATTGTTGATTGACCTTTGCATACCCTGGAAAGCCAGGGTGTGAGTGGGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp ACAGGGCAGCCCTGCTGGAACAGCCTTCAGAAAAACAGAGGTGACTaGAGCAGTGGCCACCAAATTCCCAAAGAATGTCATGTATCACAG +
Preference number: 1 (lower is better)
Translates to: TGQPCWNSLQKNRGD*SSGHQIPKECHVSQ
Trigger: CTGTGATACATGACATTCTTTGGGAATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp AGCAGATCTTCCACGAGGGTTTGGCTGGTGTGGGCTGACTTCACGTaGGCAGCATACCAAACACCTAAGTACCATTCCTTTCTCATTCTG +
Preference number: 1 (lower is better)
Translates to: SRSSTRVWLVWADFT*AAYQTPKYHSFLIL
Trigger: CAGAATGAGAAAGGAATGGTACTTAGGTGTTTGGTATGCTGCTCACGTGAAGTCAGCCCACACCAGCCAAACCCTCGTGGAAGATCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp ATGAACAGGGCAGCCCTGCTGGAACAGCCTTCAGAAAAACAGAGGTaGCTGAAGCAGTGGCCACCAAATTCCCAAAGAATGTCATGTATC +
Preference number: 1 (lower is better)
Translates to: MNRAALLEQPSEKQR*LKQWPPNSQRMSCI
Trigger: GATACATGACATTCTTTGGGAATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp TCCAGCCATATGCTACCAGCAGAAGGTATACCTGGGGATCCAATATaGATCAGTGAGTTCCGCTTTAGTTCCAGTACACAAACCACGGGC +
Preference number: 1 (lower is better)
Translates to: SSHMLPAEGIPGDPI*ISEFRFSSSTQTTG
Trigger: GCCCGTGGTTTGTGTACTGGAACTAAAGCGGAACTCACTGATTCATATTGGATCCCCAGGTATACCTTCTGCTGGTAGCATATGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp ATCCATTTTCGATGGTTGTGGGTATTGAGTGAGGTCGGACTGTGTTaGACTGTTCTAATCAGCGCTTTAAGGCGGGCCTGCATGACTTTG +
Preference number: 1 (lower is better)
Translates to: IHFRWLWVLSEVGLC*TVLISALRRACMTL
Trigger: CAAAGTCATGCAGGCCCGCCTTAAAGCGCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp GTCGGACTGTGTTGGACTGTTCTAATCAGCGCTTTAAGGCGGGCCTaGATGACTTTGCCAATCACCTTTCAAGAACATTCTATGAGAAAG +
Preference number: 1 (lower is better)
Translates to: VGLCWTVLISALRRA*MTLPITFQEHSMRK
Trigger: CTTTCTCATAGAATGTTCTTGAAAGGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGCGCTGATTAGAACAGTCCAACACAGTCCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp TTGTCTGGTACTAAGAATCCATTTTCGATGGTTGTGGGTATTGAGTaGGGTCGGACTGTGTTGGACTGTTCTAATCAGCGCTTTAAGGCG +
Preference number: 1 (lower is better)
Translates to: LSGTKNPFSMVVGIE*GRTVLDCSNQRFKA
Trigger: CGCCTTAAAGCGCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp GGAGCACTTTATGCAGCGGCTGAGTCTGACTTTGAGGAACTGTTCTaGTCTGTCTCAAATGTTTCAGTGCTTTCATCTGTTGTCCTTGAT +
Preference number: 1 (lower is better)
Translates to: GALYAAAESDFEELF*SVSNVSVLSSVVLD
Trigger: ATCAAGGACAACAGATGAAAGCACTGAAACATTTGAGACAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCGCTGCATAAAGTGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp CATTACTGGGATTGTCTGGTACTAAGAATCCATTTTCGATGGTTGTaGGTATTGAGTGAGGTCGGACTGTGTTGGACTGTTCTAATCAGC +
Preference number: 1 (lower is better)
Translates to: HYWDCLVLRIHFRWL*VLSEVGLCWTVLIS
Trigger: GCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp AAACAAAACGAAAAACTTGGAGTTCTTGGTGGTGACAAGAGAATGTaGAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTT +
Preference number: 1 (lower is better)
Translates to: KQNEKLGVLGGDKRM*SNLTPTPACCVLSV
Trigger: AACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTGTCACCACCAAGAACTCCAAGTTTTTCGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
3UTR CCA 90 bp AACCTTCATTACTGGGATTGTCTGGTACTAAGAATCCATTTTCGATaGTTGTGGGTATTGAGTGAGGTCGGACTGTGTTGGACTGTTCTA +
Preference number: 1 (lower is better)
Translates to: NLHYWDCLVLRIHFR*LWVLSEVGLCWTVL
Trigger: TAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTAATGAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp AATTACATGACTAGGACCTGCCTTCGACAAGCGTCTGATGGTCTATaGGCACATTCCGCTTACCTTCCCAATAAAATAACAAAGAAATAC +
Preference number: 1 (lower is better)
Translates to: NYMTRTCLRQASDGL*AHSAYLPNKITKKY
Trigger: GTATTTCTTTGTTATTTTATTGGGAAGGTAAGCGGAATGTGCTCATAGACCATCAGACGCTTGTCGAAGGCAGGTCCTAGTCATGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 90 bp GTTTCAGTGCTTTCATCTGTTGTCCTTGATACTGCATGTTGGCACTaGATGGTACAAAATTGGATGTTTTGGGCTGAACGTTTGAAATAC +
Preference number: 1 (lower is better)
Translates to: VSVLSSVVLDTACWH*MVQNWMFWAERLKY
Trigger: GTATTTCAAACGTTCAGCCCAAAACATCCAATTTTGTACCATCCAGTGCCAACATGCAGTATCAAGGACAACAGATGAAAGCACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 90 bp TCAAATGTTTCAGTGCTTTCATCTGTTGTCCTTGATACTGCATGTTaGCACTGGATGGTACAAAATTGGATGTTTTGGGCTGAACGTTTG +
Preference number: 1 (lower is better)
Translates to: SNVSVLSSVVLDTAC*HWMVQNWMFWAERL
Trigger: CAAACGTTCAGCCCAAAACATCCAATTTTGTACCATCCAGTGCCAACATGCAGTATCAAGGACAACAGATGAAAGCACTGAAACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 90 bp AGAAGACAACTCGAGTTAAGCTTGGTTGAGAAGACTCTTCTAACCTaGACTGAAGATAAGTGCAACCATTATCAAATATTCTTTGCTGTG +
Preference number: 1 (lower is better)
Translates to: RRQLELSLVEKTLLT*TEDKCNHYQIFFAV
Trigger: CACAGCAAAGAATATTTGATAATGGTTGCACTTATCTTCAGTGCAGGTTAGAAGAGTCTTCTCAACCAAGCTTAACTCGAGTTGTCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 90 bp TGCCACAATTCAGAAATGCCACAGAAGCAAGCTTCAACAACTGTTTaGCTGAGACCTTTACAAATCATGCTAAGAATGACCCATATTAAA +
Preference number: 1 (lower is better)
Translates to: CHNSEMPQKQASTTV*LRPLQIMLRMTHIK
Trigger: TTTAATATGGGTCATTCTTAGCATGATTTGTAAAGGTCTCAGGCAAACAGTTGTTGAAGCTTGCTTCTGTGGCATTTCTGAATTGTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 90 bp TTAGAACTTGTGACGTTAATGTTCTTTCCTGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGACCACAAAGAACAATGTCTACATGCA +
Preference number: 1 (lower is better)
Translates to: LELVTLMFFPESKSL*SIIESDHKEQCLHA
Trigger: TGCATGTAGACATTGTTCTTTGTGGTCTGACTCTATGATCGATCACAGTGACTTAGATTCAGGAAAGAACATTAACGTCACAAGTTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
3UTR-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCGGAGCCCCTGGCGCTaGGGGCACTGCATCCGGCTG +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGRSPWR*GHCIRL
Trigger: CAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGGCTGGAACAGGCTTCTaGTCGGCTGCTGCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: LALGALHPAAAGLRLSGLAGTGF*SAAAEA
Trigger: CGCCTCAGCAGCAGCCGATCAGAAGCCTGTTCCAGC...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTACCGGAAGCAGCGGCTaGAGCGGCTGCGGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGTGSSG*SGCGWN
Trigger: GTTCCAGCCGCAGCCGCTGCAGCCGCTGCTTCCGGT...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGATGGGTGGTGCGGGTaGTGCACCGGAAGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGDGWCG*CTGSSG
Trigger: GCCGCTGCTTCCGGTGCAGCACCCGCACCACCCATC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTAAAGGGTCTCGATCCTaGGGCGGGGGTGGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGKGSRS*GGGGAL
Trigger: GAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTT...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGGGGGGCAATGGAGGATaGAACGGCCCCTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: LALGALHPAAAGLRLSGLGGNGG*NGPFHF
Trigger: GAAATGGAAGGGGCCGTTGCATCCTCCATTGCCCCC...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTGGTGCGGGGGCTGGTaGGGAGGCTGGTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSWCGGW*GGWCCG
Trigger: GCCACAGCACCAGCCTCCGCACCAGCCCCCGCACCA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGCCCGGAGAGACCTGTaGTCCTGGGGGTTCTGCGCC +
Preference number: 2 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGARRDL*SWGFCA
Trigger: GGCGCAGAACCCCCAGGAGCACAGGTCTCTCCGGGC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTGCAGCGGCTGCGGCTaGAACAGGCTTCTGATCGGC +
Preference number: 2 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCCSGCG*NRLLIG
Trigger: GCCGATCAGAAGCCTGTTCCAGCCGCAGCCGCTGCA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCGTTCTTGGGCTGCTGTaGAGTCACGGGTGGCGGGGT +
Preference number: 2 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCVLGLL*SHGWRG
Trigger: ACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAAC...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGGTGGAGGGGGAGCCTaGGGCTCTCTAGAGGCTTTA +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGGGGGA*GSLEAL
Trigger: TAAAGCCTCTAGAGAGCCCCAGGCTCCCCCTCCACC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTGGTAGGAGGCGGTGGTaGTGGAGGGGGACTTCGCTG +
Preference number: 2 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCGRRRW*WRGTSL
Trigger: CAGCGAAGTCCCCCTCCACCACCACCGCCTCCTACC...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGGTGAGGCCGGAACTGTaGCTGAGACATCGGCATCAA +
Preference number: 2 (lower is better)
Translates to: LALGALHPAAAGLRLSGLVRPEL*LRHRHQ
Trigger: TTGATGCCGATGTCTCAGCCACAGTTCCGGCCTCAC...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLESGP*LAGALE
Trigger: CTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGACCACACAGACAGCATaGAAGGGAACCGCATACAGC +
Preference number: 2 (lower is better)
Translates to: LALGALHPAAAGLRLSGLTTQTA*KGTAYS
Trigger: GCTGTATGCGGTTCCCTTTCATGCTGTCTGTGTGGT...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCACTGCATCCGGCTGCTaGTGGCCTGAGGCTGAGCGG +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSTASGC*WPEAER
Trigger: CCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGT...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGCCCGGAGAGACCTGTaGTCCTGGGGGTTCTGCGCC +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPARRDL*SWGFCA
Trigger: GGCGCAGAACCCCCAGGAGCACAGGTCTCTCCGGGC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTAATCCCCACCGGACCTaGAGGCTGCAAGGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCNPHRT*RLQGWS
Trigger: CGACCAGCCTTGCAGCCTCCAGGTCCGGTGGGGATT...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGTTGCCGACCCAGGCTaGCTAAAGTGCAGAATCCCC +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGVADPG*LKCRIP
Trigger: GGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAAC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCTGGTCCTGGCTGAGTaGATGGTAGAGGACTCTGAG +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGLVLAE*MVEDSE
Trigger: CTCAGAGTCCTCTACCATTCACTCAGCCAGGACCAG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGTGGGCTGCATTTGCTaGATGGGCCGCTTGCTTACA +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGVGCIC*MGRLLT
Trigger: TGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCAC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGACTAGGCCAGAGGGCTaGCAGGTGAGGCCATCACAG +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQTRPEG*QVRPSQ
Trigger: CTGTGATGGCCTCACCTGGCAGCCCTCTGGCCTAGT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTTCCTGGGACTGACTaGTGCAACAGCCCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLPGTD*CNSPCS
Trigger: GCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTGGCGGCAGCACAGCTaGAGGGTCCTAGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGWRQHS*RVLADP
Trigger: AGGATCTGCTAGGACCCTGCAGCTGTGCTGCCGCCA...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGATGGGCACACAGACCTaGTCCCTGGACAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQMGTQT*SLDSLL
Trigger: CAGGAGGCTGTCCAGGGAGCAGGTCTGTGTGCCCAT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACA +
Preference number: 2 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGNQARG*LALWRT
Trigger: TGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQSVRLL*NQARGW
Trigger: CCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGA...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTCCCTGAGGCGGGGATaGGTGGTGCGGGTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: FTCAEGVAEQRLLLISITSLRRG*VVRVLH
Trigger: GTGCAGCACCCGCACCACCCATCCCCGCCTCAGGGA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTCCAGGTGTATGCTGTaGAAATTCTGGAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCSRCML*KFWRAW
Trigger: CCAGGCCCTCCAGAATTTCCACAGCATACACCTGGA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGGCCGGAACTGTGGCTaGGACATCGGCATCAAAGGA +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSGRNCG*DIGIKG
Trigger: TCCTTTGATGCCGATGTCTCAGCCACAGTTCCGGCC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGAGCGGCTGCAGCGGCTaGGGCTGGAACAGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: PLAYILRSCIMPEPLALGSGCSG*GWNRLL
Trigger: CAGAAGCCTGTTCCAGCCGCAGCCGCTGCAGCCGCT...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGACCGGACCTGGAGGCTaGAAGGCTGGTCGTACGGGC +
Preference number: 2 (lower is better)
Translates to: FTCAEGVAEQRLLLISITTGPGG*KAGRTG
Trigger: GCCCGTACGACCAGCCTTGCAGCCTCCAGGTCCGGT...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCATGGGCACACAGACCTaGTCCCTGGACAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTMGTQT*SLDSLL
Trigger: CAGGAGGCTGTCCAGGGAGCAGGTCTGTGTGCCCAT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGCTCTCCACTGGTCCTaGAGAGGGAGTCGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PLAYILRSCIMPEPLALGALHWS*RGSRGG
Trigger: GCCCCCACGACTCCCTCTCCAGGACCAGTGGAGAGC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCTCTCTTGGGAACACTaGCTGCTGTCCTTGCTGATT +
Preference number: 2 (lower is better)
Translates to: ELLEPATAREGGDALTIGLSWEH*LLSLLI
Trigger: AATCAGCAAGGACAGCAGCCAGTGTTCCCAAGAGAG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTGGGCTGTGTGTGTGTaGGCAGAAACGGCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSWAVCV*AETAVL
Trigger: CAGGACAGCCGTTTCTGCCCACACACACACAGCCCA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGGCTGGCTGGCGCTCTaGAGAACAGTTACGCAGGAC +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPGWLAL*RTVTQD
Trigger: GTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTA +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPRPVAG*RSGEQL
Trigger: TAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAATGCTCCTGGGGGTTCTaGGCCGGCCGGCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWECSWGF*AGRQLP
Trigger: AGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCGAGGGCCATGCCGTGTaGCTGTCCAGCACATTGCCT +
Preference number: 2 (lower is better)
Translates to: DTDSSHLGLEESHPHPACEGHAV*LSSTLP
Trigger: AGGCAATGTGCTGGACAGGCACACGGCATGGCCCTC...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGCTTTAAGGCGGGCCTaGATGACTTTGCCAATCACC +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQALRRA*MTLPIT
Trigger: GGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGTGGGGCTCTCCACTaGTCCTGGAGAGGGAGTCGT +
Preference number: 2 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGGALH*SWRGSR
Trigger: ACGACTCCCTCTCCAGGACCAGTGGAGAGCCCCACC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGAATCTGCTGTTCAACTaGCACCACTCCCAACCACCC +
Preference number: 2 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGNLLFN*HHSQPP
Trigger: GGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGATT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCACCACGAGGGTTTGGCTaGTGTGGGCTGACTTCACGT +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPPRGFG*CGLTSR
Trigger: ACGTGAAGTCAGCCCACACCAGCCAAACCCTCGTGG...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGATGGTTGTGGGTATTaGGTGAGGTCGGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQDGCGY*VRSDCV
Trigger: AACACAGTCCGACCTCACTCAATACCCACAACCATC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCACAGCCCCTGCAGCGTaGAGTGTTACTCTCAAGCAC +
Preference number: 2 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTTAPAA*SVTLKH
Trigger: GTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCTGCTGCAACAGCCCCTaGAGCGTGCAGTGTTACTCT +
Preference number: 2 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTCCNSP*SVQCYS
Trigger: AGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCA...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCCACCACCTCATGTGTaGTGGGAACTAGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: DTDSSHLGLEESHPHPACPPPHV*WELGQR
Trigger: CCTCTGGCCTAGTTCCCACCACACATGAGGTGGTGG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCATCCTACAAGCGCTGTaGCTTCCTGGGACTGACTGC +
Preference number: 2 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTILQAL*LPGTDC
Trigger: GCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAGGAT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp GGCGTGACCACCGTCCCTTTGAAGTGCGGGTTGATGTGTATGTTCTaGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTT +
Preference number: 2 (lower is better)
Translates to: GVTTVPLKCGLMCMF*GCCGVTGGGVIIIL
Trigger: AAGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACACATCAACCCGCACTTCAAAGGGACGGTGGTCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTACCGTCCCTTTGAAGTaGGGGTTGATGTGTATGTTC +
Preference number: 2 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCTVPLK*GLMCMF
Trigger: GAACATACACATCAACCCGCACTTCAAAGGGACGGT...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGTGCTCCTGGGGGTTCTaGGCCGGCCGGCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRCSWGF*AGRQLP
Trigger: AGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGGCCATCACAGACCCTaGTCTAGCCGAGGGCCATGC +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAGHHRP*SSRGPC
Trigger: GCATGGCCCTCGGCTAGAGCAGGGTCTGTGATGGCC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAACTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWELESGP*LAGALE
Trigger: CTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAG...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAACAGGGCAGCCCTGCTaGAACAGCCTTCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPTGQPC*NSLQKN
Trigger: GTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTTGGCTGGGACACTCTaGAGCAGAGGTGGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQALAGTL*SRGGGS
Trigger: GCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp GGGTGGTTAAGGGCACGAACCGCACACTGCGGGACGCCGGCATCTTaGAATCGCCACTCACTCCTACAGAGCCAAACTGCAAAACAACAG +
Preference number: 2 (lower is better)
Translates to: GWLRARTAHCGTPAS*NRHSLLQSQTAKQQ
Trigger: CTGTTGTTTTGCAGTTTGGCTCTGTAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGCCCTTAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGAAAAACAGAGGTGACTaGAGCAGTGGCCACCAAATT +
Preference number: 2 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQKNRGD*SSGHQI
Trigger: AATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGCCTGTCCAGCACATTaGCTTATCTGGGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPACPAH*LIWEVC
Trigger: ACACACTTCCCAGATAAGGCAATGTGCTGGACAGGC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTCTAGCCGAGGGCCATaGCGTGTGCCTGTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: ITATERIAGSGRPASALQSSRGP*RVPVQH
Trigger: GTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGGCTGGCTGGCGCTCTaGAGAACAGTTACGCAGGAC +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAGWLAL*RTVTQD
Trigger: GTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGAGGTCGGACTGTGTTaGACTGTTCTAATCAGCGCT +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPEVGLC*TVLISA
Trigger: AGCGCTGATTAGAACAGTCCAACACAGTCCGACCTC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCGCTTGCTTACATTCTaGGAAGTTGTATTATGCCGG +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSRLLTF*EVVLCR
Trigger: CCGGCATAATACAACTTCTCAGAATGTAAGCAAGCG...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp TCACGTGTGACGGCGCTATGGGTAATTCACGCAAATTGCTGTTCCTaGGCGCAGTGGGCTGCATTTGCTGCATGGGCCGCTTGCTTACAT +
Preference number: 2 (lower is better)
Translates to: SRVTALWVIHANCCS*AQWAAFAAWAACLH
Trigger: ATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp CTCATTTCTATCACGTGTGACGGCGCTATGGGTAATTCACGCAAATaGCTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCATGGGCCGC +
Preference number: 2 (lower is better)
Translates to: LISITCDGAMGNSRK*LFLGAVGCICCMGR
Trigger: GCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGATAGAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTTGGCTGGTGTGGGCTaGCTTCACGTGAGCAGCATA +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQALAGVG*LHVSSI
Trigger: TATGCTGCTCACGTGAAGTCAGCCCACACCAGCCAA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGCTGCATGGGCCGCTTaGTTACATTCTGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: FTCAEGVAEQRLLLISITAAWAA*LHSEKL
Trigger: CAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAACTAGGCCAGAGGGCTaGCAGGTGAGGCCATCACAG +
Preference number: 2 (lower is better)
Translates to: PAACSVTLKHTANATLESTRPEG*QVRPSQ
Trigger: CTGTGATGGCCTCACCTGGCAGCCCTCTGGCCTAGT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGAAAGTCTGCCTATGTaGACGTGTAGACAGTTAGAG +
Preference number: 2 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTESLPM*TCRQLE
Trigger: CTCTAACTGTCTACACGTGCACATAGGCAGACTTTC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTGTTCCAGAAAAAGATaGCTCGGGAATCTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSCSRKR*LGNLGS
Trigger: TGAACCAAGATTCCCGAGCCATCTTTTTCTGGAACA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp GACCCTGCTCTAGCCGAGGGCCATGCCGTGTGCCTGTCCAGCACATaGCCTTATCTGGGAAGTGTGTTAAAAATGAATGGGGAGTTCATC +
Preference number: 2 (lower is better)
Translates to: DPALAEGHAVCLSST*PYLGSVLKMNGEFI
Trigger: GATGAACTCCCCATTCATTTTTAACACACTTCCCAGATAAGGCAATGTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGAGCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPESKSL*SIIESD
Trigger: GTCTGACTCTATGATCGATCACAGTGACTTAGATTC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCGGAGGCTGGTGCTGTaGCGGGGGCTGTTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPRRLVL*RGLLLR
Trigger: CCTCAGCAACAGCCCCCGCCACAGCACCAGCCTCCG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACCCCACTCACACCCTaGCTTTCCAGGGTATGCAAA +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATPLTP*LSRVCK
Trigger: TTTGCATACCCTGGAAAGCCAGGGTGTGAGTGGGGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGGCACTGCATCCGGCTaGTGCTGGCCTGAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPGTASG*CWPEAE
Trigger: CTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGCTGGTGCGGAGGCTaGTGCTGTGGCGGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGWCGG*CCGGGC
Trigger: ACAGCCCCCGCCACAGCACCAGCCTCCGCACCAGCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGAATCTGCTGTTCAACTaGCACCACTCCCAACCACCC +
Preference number: 2 (lower is better)
Translates to: ITATERIAGSGRPASALQNLLFN*HHSQPP
Trigger: GGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGATT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCCATCTTCCGAGGGTTaGCTGGGACACTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRPSSEG*LGHSGA
Trigger: TGCTCCAGAGTGTCCCAGCCAACCCTCGGAAGATGG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTTTCCTGGCACCAGCCTaGTGCTGCCGCCGTAACTCC +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPFLAPA*CCRRNS
Trigger: GGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAGGAA...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGGGCCTGGGAATCTCTaGGGTCCCACGGCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIGPGNL*GPTAGL
Trigger: GAGACCTGCCGTGGGACCCCAGAGATTCCCAGGCCC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTAGGAGGCGGTGGTGGTaGAGGGGGACTTCGCTGTTC +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPRRRWW*RGTSLF
Trigger: GAACAGCGAAGTCCCCCTCCACCACCACCGCCTCCT...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCAGAAACGGCTGTCCTaGGCCTGGCAGGAACGGCTG +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPQKRLS*AWQERL
Trigger: CAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAACAGGGCAGCCCTGCTaGAACAGCCTTCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: PAACSVTLKHTANATLESTGQPC*NSLQKN
Trigger: GTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGCATGTGCATTCCCTaGGGCGGGGATGGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGMCIP*GGDGWC
Trigger: GCACCACCCATCCCCGCCTCAGGGAATGCACATGCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAGGCGGGGATGGGTGGTaGGGGTGCTGCACCGGAAGC +
Preference number: 2 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGGGDGW*GCCTGS
Trigger: GCTTCCGGTGCAGCACCCGCACCACCCATCCCCGCC...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTACGGCAGGTCTCGGCTaGCTCGGAACTGGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPTAGLG*LGTGSK
Trigger: CTTGCTACCAGTTCCGAGCCAGCCGAGACCTGCCGT...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAGAGACCTGTGCTCCTaGGGGTTCTGCGCCGGCCGG +
Preference number: 2 (lower is better)
Translates to: RMNSTTVALWRICLTYRNRDLCS*GFCAGR
Trigger: CCGGCCGGCGCAGAACCCCCAGGAGCACAGGTCTCT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGAAGGATCGCAGGGTCTaGAAGACCTGCTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRKDRRV*KTCFSS
Trigger: AGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACTCCAACGCAGCTGTaGACTGAGCCAAATAAACTA +
Preference number: 2 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATPTQL*TEPNKL
Trigger: TAGTTTATTTGGCTCAGTCCACAGCTGCGTTGGAGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGGGCCCGCGAGGGTGGTaGCGCGCTGACGATAGGTTT +
Preference number: 2 (lower is better)
Translates to: SLSDITLFPHLHQETLFLGPRGW*RADDRF
Trigger: AAACCTATCGTCAGCGCGTCACCACCCTCGCGGGCC...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTTTCCGTCTTTCCCTGTaGGCTTCTGGAACCCGCCAC +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPFRLSL*ASGTRH
Trigger: GTGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAA...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGAACCTTTCCTGCCCTaGACACACTCCTATCAGTCA +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVREPFLP*THSYQS
Trigger: TGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCTGTGGAGTCACGGGTaGCGGGGTCATCATCATCCT +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPLWSHG*RGHHHP
Trigger: AGGATGATGATGACCCCGCCACCCGTGACTCCACAG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: ITATERIAGSGRPASALQESKSL*SIIESD
Trigger: GTCTGACTCTATGATCGATCACAGTGACTTAGATTC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATGGTGGTGGTGCTGGTaGTGCGGCGGGTGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGWWWCW*CGGCCG
Trigger: ACCACAGCACCCGCCGCAGCACCAGCACCACCACCA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCTTGGCGCAGTGGGCTaGATTTGCTGCATGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SLSDITLFPHLHQETLFLLGAVG*ICCMGR
Trigger: GCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATACTGGAGAGGGAGTCGTaGGGGCTGGCTGAAACTGTT +
Preference number: 2 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGILERES*GLAETV
Trigger: AACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAG...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTTCATTTTCCGTTTTTaGCTTAGATACGTATTCCAC +
Preference number: 2 (lower is better)
Translates to: FTCAEGVAEQRLLLISITFIFRF*LRYVFH
Trigger: GTGGAATACGTATCTAAGCCAAAAACGGAAAATGAA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTTGTTCCTTGGCGCAGTaGGCTGCATTTGCTGCATGG +
Preference number: 2 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPCSLAQ*AAFAAW
Trigger: CCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACA...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp TGCAGGTTTGATCGGGAGCACTTTATGCAGCGGCTGAGTCTGACTTaGAGGAACTGTTCTGGTCTGTCTCAAATGTTTCAGTGCTTTCAT +
Preference number: 2 (lower is better)
Translates to: CRFDREHFMQRLSLT*RNCSGLSQMFQCFH
Trigger: ATGAAAGCACTGAAACATTTGAGACAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCGCTGCATAAAGTGCTCCCGATCAAACCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCAACGGCAGGCCAGAGTaGACATCCGCTGATGAACAG +
Preference number: 2 (lower is better)
Translates to: NSTTVALWRICLTYRNLPNGRPE*TSADEQ
Trigger: CTGTTCATCAGCGGATGTTCACTCTGGCCTGCCGTT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATATGTATGTTCTTGGGCTaGTGTGGAGTCACGGGTGGC +
Preference number: 2 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGICMFLG*CGVTGG
Trigger: GCCACCCGTGACTCCACAGCAGCCCAAGAACATACA...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCATGGCTTTCCAGGGTATaGAAAGGTCAATCAACAATC +
Preference number: 2 (lower is better)
Translates to: PAACSVTLKHTANATLESWLSRV*KGQSTI
Trigger: GATTGTTGATTGACCTTTGCATACCCTGGAAAGCCA...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTA +
Preference number: 2 (lower is better)
Translates to: RMNSTTVALWRICLTYRNRPVAG*RSGEQL
Trigger: TAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACA +
Preference number: 2 (lower is better)
Translates to: RMNSTTVALWRICLTYRNNQARG*LALWRT
Trigger: TGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGATAAAACGTCAACTGTaGAAACGAGATGACGCAAGT +
Preference number: 2 (lower is better)
Translates to: ITATERIAGSGRPASALQIKRQL*KRDDAS
Trigger: ACTTGCGTCATCTCGTTTCCACAGTTGACGTTTTAT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGACTCCAACGCAGCTGTaGACTGAGCCAAATAAACTA +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRTPTQL*TEPNKL
Trigger: TAGTTTATTTGGCTCAGTCCACAGCTGCGTTGGAGT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCAACAACTGTTTGCCTaGGACCTTTACAAATCATGC +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRQQLFA*DLYKSC
Trigger: GCATGATTTGTAAAGGTCTCAGGCAAACAGTTGTTG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCCAGGCTGGCTAAAGTaGAGAATCCCCACCGGACCT +
Preference number: 2 (lower is better)
Translates to: SLSDITLFPHLHQETLFLPGWLK*RIPTGP
Trigger: AGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGTGGGTTACCGTTGGTaGGTGATGGTGACAGTGCCT +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPVGYRW*VMVTVP
Trigger: AGGCACTGTCACCATCACCCACCAACGGTAACCCAC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCCACCTCATGTGTGGTaGGAACTAGGCCAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RMNSTTVALWRICLTYRNPPHVW*ELGQRA
Trigger: AGCCCTCTGGCCTAGTTCCCACCACACATGAGGTGG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp TGTTGGACTGTTCTAATCAGCGCTTTAAGGCGGGCCTGCATGACTTaGCCAATCACCTTTCAAGAACATTCTATGAGAAAGTCTGCCTAT +
Preference number: 2 (lower is better)
Translates to: CWTVLISALRRACMT*PITFQEHSMRKSAY
Trigger: ATAGGCAGACTTTCTCATAGAATGTTCTTGAAAGGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGCGCTGATTAGAACAGTCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp TGGGATTGTCTGGTACTAAGAATCCATTTTCGATGGTTGTGGGTATaGAGTGAGGTCGGACTGTGTTGGACTGTTCTAATCAGCGCTTTA +
Preference number: 2 (lower is better)
Translates to: WDCLVLRIHFRWLWV*SEVGLCWTVLISAL
Trigger: TAAAGCGCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp GATATAGCTATGAAGACACTAAAAGGTACAAAATATAAACCGGTCTaGTCCAGAATTCGCCCTGACAACCTCAGGGTCTTGGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: DIAMKTLKGTKYKPV*SRIRPDNLRVLGRV
Trigger: GACCCTTCCCAAGACCCTGAGGTTGTCAGGGCGAATTCTGGACAAGACCGGTTTATATTTTGTACCTTTTAGTGTCTTCATAGCTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
3UTR-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGACTTGGGGTCTCTAGCTaGGGAGGCATGTGCATTCCC +
Preference number: 2 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGLGVSS*GGMCIP
Trigger: GGGAATGCACATGCCTCCCCAGCTAGAGACCCCAAG...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp CTTCATTACTGGGATTGTCTGGTACTAAGAATCCATTTTCGATGGTaGTGGGTATTGAGTGAGGTCGGACTGTGTTGGACTGTTCTAATC +
Preference number: 2 (lower is better)
Translates to: LHYWDCLVLRIHFRW*WVLSEVGLCWTVLI
Trigger: GATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAAATGGTAGAGGACTCTaGGTAGGAACAGGATGGCTA +
Preference number: 2 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGINGRGL*VGTGWL
Trigger: TAGCCATCCTGTTCCTACTCAGAGTCCTCTACCATT...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGAATGCTGGTCCTGGCTaGGTGAATGGTAGAGGACTC +
Preference number: 2 (lower is better)
Translates to: SLSDITLFPHLHQETLFLNAGPG*VNGRGL
Trigger: GAGTCCTCTACCATTCACTCAGCCAGGACCAGCATT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCACAGGTCCAGGTGTATaGTGTGGAAATTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPTGPGV*CGNSGG
Trigger: CCCTCCAGAATTTCCACAGCATACACCTGGACCTGT...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCATGCTGTGGAAATTCTaGAGGGCCTGGGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPMLWKF*RAWESL
Trigger: CAGAGATTCCCAGGCCCTCCAGAATTTCCACAGCAT...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAGCATTACCTGCAGGTTaGGCTGTGTGTGTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGALPAG*AVCVWA
Trigger: TGCCCACACACACACAGCCCAACCTGCAGGTAATGC...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCGTGTGACGGCGCTATaGGTAATTCACGCAAATTGC +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPRVTAL*VIHANC
Trigger: GCAATTTGCGTGAATTACCCATAGCGCCGTCACACG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGAGGTCCATATTTACATaGTATGCTAAATGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRRSIFT*YAKCSC
Trigger: GCAAGAGCATTTAGCATACCATGTAAATATGGACCT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCTTGCTGATTAAATGCTaGTCCTGGCTGAGTGAATGG +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPLLIKC*SWLSEW
Trigger: CCATTCACTCAGCCAGGACCAGCATTTAATCAGCAA...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACACAAGAAGCAGAATCTaGTGTTCAACTGGCACCACT +
Preference number: 2 (lower is better)
Translates to: RMNSTTVALWRICLTYRNTRSRI*CSTGTT
Trigger: AGTGGTGCCAGTTGAACAGCAGATTCTGCTTCTTGT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCACTGCATGTTGGCACTaGATGGTACAAAATTGGATG +
Preference number: 2 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPTACWH*MVQNWM
Trigger: CATCCAATTTTGTACCATCCAGTGCCAACATGCAGT...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR TCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATACTGGTAAACCTCTCATaGAATTTTATACAGATGAGC +
Preference number: 2 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGILVNLS*NFIQMS
Trigger: GCTCATCTGTATAAAATTTCATGAGAGGTTTACCAG...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 90 bp GTATGCAAAGGTCAATCAACAATCACCCAAATTTTAATCTACATTTaGTACAAGAGCCTTTTGAGGGCTGAGAAGACAACTCGAGTTAAG +
Preference number: 2 (lower is better)
Translates to: VCKGQSTITQILIYI*YKSLLRAEKTTRVK
Trigger: CTTAACTCGAGTTGTCTTCTCAGCCCTCAAAAGGCTCTTGTACAAAATGTAGATTAAAATTTGGGTGATTGTTGATTGACCTTTGCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 90 bp TTTTCTGTAGTTTCCTTCAAGGAAACTAAACCTTCATTACTGGGATaGTCTGGTACTAAGAATCCATTTTCGATGGTTGTGGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: FSVVSFKETKPSLLG*SGTKNPFSMVVGIE
Trigger: CTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTAATGAAGGTTTAGTTTCCTTGAAGGAAACTACAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR TCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCATGAAAAGATCAAATaGTATGTGACACTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SLSDITLFPHLHQETLFLHEKIK*YVTLEG
Trigger: TCCCTCCAGTGTCACATATCATTTGATCTTTTCATG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR GCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAATCTTCTTCCCTCCATaGAAAGACTCTTTTCAAAAC +
Preference number: 2 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGIFFPP*KDSFQN
Trigger: GTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGAT...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp GCCGGAGCCCCTGGCGCTGGGGGCACTGCATCCGGCTaGTGCTGGCCTGAGGCTGAGCGGTCTGTACGTGAG +
Preference number: 3 (lower is better)
Translates to: AGAPGAGGTASG*CWPEAERSVRE
Trigger: CTCACGTACAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTaGTGGTGCTGGTGCTGCGGCGGGTGCTGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: KGGGGTDRWWWW*WCWCCGGCCGG
Trigger: CCCACCACAGCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp GATGGGTGGTGCGGGTGCTGCACCGGAAGCAGCGGCTaGAGCGGCTGCGGCTGGAACAGGCTTCTGATCGGC +
Preference number: 3 (lower is better)
Translates to: DGWCGCCTGSSG*SGCGWNRLLIG
Trigger: GCCGATCAGAAGCCTGTTCCAGCCGCAGCCGCTGCAGCCGCTGCTTCCGGTGCAGCACCCGCACCACCCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GGCATCAAAGGAGGGGGCGGGACGGACAGGTGGTGGTaGTGGTGGTGGTGCTGGTGCTGCGGCGGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: GIKGGGGTDRWW*WWWCWCCGGCC
Trigger: ACAGCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTTGATGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp ATCGGCATCAAAGGAGGGGGCGGGACGGACAGGTGGTaGTGGTGGTGGTGGTGCTGGTGCTGCGGCGGGTGC +
Preference number: 3 (lower is better)
Translates to: IGIKGGGGTDRW*WWWWCWCCGGC
Trigger: GCACCCGCCGCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTTGATGCCGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TCACGCCAGGCTTTGTGTCCTGGGGCCGGCCCTGGATaGACGCCACTCGAGGAGTCTGGGGGACAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: SRQALCPGAGPG*TPLEESGGQLA
Trigger: AGCCAGCTGTCCCCCAGACTCCTCGAGTGGCGTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGGCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp GTCAACACAGCTTCGCCCCCAACCAGAGCCACCCGGTaGAGCCCGCAGAGTGTACACGCATCAGGGCCGGGA +
Preference number: 3 (lower is better)
Translates to: VNTASPPTRATR*SPQSVHASGPG
Trigger: TCCCGGCCCTGATGCGTGTACACTCTGCGGGCTGCACCGGGTGGCTCTGGTTGGGGGCGAAGCTGTGTTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCGGGCTGTTGCTGAGGTaGCTGAGGCTGAGGCTGATG +
Preference number: 3 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCGLLLR*LRLRLM
Trigger: CATCAGCCTCAGCCTCAGCAACCTCAGCAACAGCCC...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp CTCACCCCGCATGCCACGGGGAACGGCAGGCCAGAGTaGACATCCGCTGATGAACAGGGCAGCCCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: LTPHATGNGRPE*TSADEQGSPAG
Trigger: TCCAGCAGGGCTGCCCTGTTCATCAGCGGATGTTCACTCTGGCCTGCCGTTCCCCGTGGCATGCGGGGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp TCCTGCTCTGCTGGGGGTGGGGGAGCGTACAGCTGCTaGTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: SCSAGGGGAYSC*CCCASLSSSSF
Trigger: GAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCCACCCCCAGCAGAGCAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GGGTGGGGCTCTCCACTGGTCCTGGAGAGGGAGTCGTaGGGGCTGGCTGAAACTGTTGGGAACAGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: GWGSPLVLERES*GLAETVGNRSR
Trigger: CCTGGACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAGGACCAGTGGAGAGCCCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp CAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTACGCAGGACAGCGGCC +
Preference number: 3 (lower is better)
Translates to: QFGSSGIRPVAG*RSGEQLRRTAA
Trigger: GGCCGCTGTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp AAGGGCCGTGTGGTTGCCGACCCAGGCTGGCTAAAGTaGAGAATCCCCACCGGACCTGGAGGCTGCAAGGCT +
Preference number: 3 (lower is better)
Translates to: KGRVVADPGWLK*RIPTGPGGCKA
Trigger: AGCCTTGCAGCCTCCAGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAACCACACGGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp TCTGCTGGGGGTGGGGGAGCGTACAGCTGCTGCTGTTaGTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: SAGGGGAYSCCC*CASLSSSSFFL
Trigger: CAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCCACCCCCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GGAGGAATGAAGGGCCGTGTGGTTGCCGACCCAGGCTaGCTAAAGTGCAGAATCCCCACCGGACCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: GGMKGRVVADPG*LKCRIPTGPGG
Trigger: GCCTCCAGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAACCACACGGCCCTTCATTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp CTGAGGCTGAGCGGTCTGTACGTGAGGCCGGAACTGTaGCTGAGACATCGGCATCAAAGGAGGGGGCGGGAC +
Preference number: 3 (lower is better)
Translates to: LRLSGLYVRPEL*LRHRHQRRGRD
Trigger: GTCCCGCCCCCTCCTTTGATGCCGATGTCTCAGCCACAGTTCCGGCCTCACGTACAGACCGCTCAGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TGCGTGACAGTCCTTTTCACGCCAGGCTTTGTGTCCTaGGGCCGGCCCTGGATGGACGCCACTCGAGGAGTC +
Preference number: 3 (lower is better)
Translates to: CVTVLFTPGFVS*GRPWMDATRGV
Trigger: GACTCCTCGAGTGGCGTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGGCGTGAAAAGGACTGTCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp ACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGGCTGGCGCTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: TPACCVLSVRLL*NQARGWLALWR
Trigger: TCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
3UTR CCA 72 bp CTTCCGAGGGTTGGCTGGGACACTCTGGAGCAGAGGTaGCGGCAGCACAGCTGCAGGGTCCTAGCAGATCCT +
Preference number: 3 (lower is better)
Translates to: LPRVGWDTLEQR*RQHSCRVLADP
Trigger: AGGATCTGCTAGGACCCTGCAGCTGTGCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAACCCTCGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp CTGCGAAAGCAGAGGGGCGGGAAACAAAGAAGCGGGTaGTTAAGGGCACGAACCGCACACTGCGGGACGCCG +
Preference number: 3 (lower is better)
Translates to: LRKQRGGKQRSG*LRARTAHCGTP
Trigger: CGGCGTCCCGCAGTGTGCGGTTCGTGCCCTTAACCACCCGCTTCTTTGTTTCCCGCCCCTCTGCTTTCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGTACGGGCCGCTCTCTaGGGAACACTGGCTGCTGTC +
Preference number: 3 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSVRAAL*GTLAAV
Trigger: GACAGCAGCCAGTGTTCCCAAGAGAGCGGCCCGTAC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp GCTAGCTGGCTTGACTTTCACTTCCGTCTTTCCCTGTaGGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGG +
Preference number: 3 (lower is better)
Translates to: ASWLDFHFRLSL*ASGTRHGPRGW
Trigger: CCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAAGTCAAGCCAGCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp CTGTGTGTGTGTGGGCAGAAACGGCTGTCCTGGGCCTaGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCG +
Preference number: 3 (lower is better)
Translates to: LCVCGQKRLSWA*QERLSRRNEGP
Trigger: CGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTGCCCACACACACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp CTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACAGTTACGCAGGACAGC +
Preference number: 3 (lower is better)
Translates to: LSVRLLWNQARG*LALWRTVTQDS
Trigger: GCTGTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCCCTTTGAAGTGCGGGTaGATGTGTATGTTCTTGGGC +
Preference number: 3 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCPLKCG*MCMFLG
Trigger: GCCCAAGAACATACACATCAACCCGCACTTCAAAGG...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCGATGGCTCGGGAATCTaGGTTCACCTGAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCDGSGI*VHLKLL
Trigger: TAGGAGTTTCAGGTGAACCAAGATTCCCGAGCCATC...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp GGGGCCCGTCTCCACCACCACTGTTTGTCCTGTGCGTaGCAGTCCTTTTCACGCCAGGCTTTGTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: GARLHHHCLSCA*QSFSRQALCPG
Trigger: CCCAGGACACAAAGCCTGGCGTGAAAAGGACTGTCACGCACAGGACAAACAGTGGTGGTGGAGACGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GCTCTCCACTGGTCCTGGAGAGGGAGTCGTGGGGGCTaGCTGAAACTGTTGGGAACAGGTCCAGGTGTATGC +
Preference number: 3 (lower is better)
Translates to: ALHWSWRGSRGG*LKLLGTGPGVC
Trigger: GCATACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAGGACCAGTGGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAGAACAGTTACGCAGGA +
Preference number: 3 (lower is better)
Translates to: CPVSSAPLESGP*LAGALENSYAG
Trigger: TCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp TGCTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTaGAGAAATTCCACAGTGTGTGTACAGCCTAAGGTC +
Preference number: 3 (lower is better)
Translates to: CSWGFCAGRQLP*RNSTVCVQPKV
Trigger: GACCTTAGGCTGTACACACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp CGAATCCCAGGAAGAGCACCACGAAAGCGGGAAGCCTaGAGTCACCCACAAAGGGCACTGCAGACACCGCAC +
Preference number: 3 (lower is better)
Translates to: RIPGRAPRKREA*SHPQRALQTPH
Trigger: GTGCGGTGTCTGCAGTGCCCTTTGTGGGTGACTTCAGGCTTCCCGCTTTCGTGGTGCTCTTCCTGGGATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp CCTCCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTaGTGCCTGTCCACAAAACAGAGAAACCCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: PPARQGAGAYGG*CLSTKQRNPSK
Trigger: TTTTGAGGGGTTTCTCTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp CCGAGTGGTGGTAGTCGGGTGCCTCCGAACCTTTCCTaGCCTGCACACACTCCTATCAGTCAACTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: PSGGSRVPPNLS*PAHTPISQLPG
Trigger: ACCAGGGAGTTGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGGCACCCGACTACCACCACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp TCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTaGCTCCGAACCTTTCCTGCCCTGCACACACTCCTA +
Preference number: 3 (lower is better)
Translates to: SGLAAFRVVVVG*LRTFPALHTLL
Trigger: TAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp CAAAGAAGCGGGTGGTTAAGGGCACGAACCGCACACTaGGGGACGCCGGCATCTTTGAATCGCCACTCACTC +
Preference number: 3 (lower is better)
Translates to: QRSGWLRARTAH*GTPASLNRHSL
Trigger: GAGTGAGTGGCGATTCAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGCCCTTAACCACCCGCTTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp GTTGGGCTGTGTGTGTGTGGGCAGAAACGGCTGTCCTaGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAA +
Preference number: 3 (lower is better)
Translates to: VGLCVCGQKRLS*AWQERLSRRNE
Trigger: TTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTGCCCACACACACACAGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTTTGATGTGTATGTTCTaGGGCTGCTGTGGAGTCACG +
Preference number: 3 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCLMCMF*GCCGVT
Trigger: CGTGACTCCACAGCAGCCCAAGAACATACACATCAA...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp TCACCTGAAACTCCTAAGAAGAAAGGGTCTCGATCCTaGGGCGGGGGTGGGGCTCTCCACTGGTCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: SPETPKKKGSRS*GGGGALHWSWR
Trigger: TCTCCAGGACCAGTGGAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTTCTTCTTAGGAGTTTCAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp CTAGCAGATCCTACAAGCGCTGTGGCTTCCTGGGACTaGCTGCTGCAACAGCCCCTGCAGCGTGCAGTGTTA +
Preference number: 3 (lower is better)
Translates to: LADPTSAVASWD*LLQQPLQRAVL
Trigger: TAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAGGATCTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp GGCCCAAGGGCTCTCAACTCCACCGACCGGACTGGATaGCCTCCCCTGATAAGCCAGTGTGTTAGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: GPRALNSTDRTG*PPLISQCVRSK
Trigger: CTTGCTTCTAACACACTGGCTTATCAGGGGAGGTCATCCAGTCCGGTCGGTGGAGTTGAGAGCCCTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp TCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTaGTCATTTCTATCACGTGTGACGGCGCTATGGGTA +
Preference number: 3 (lower is better)
Translates to: SLVLRAWQSSGC*SFLSRVTALWV
Trigger: TACCCATAGCGCCGTCACACGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp GTTTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTaGTGCTCATTTCTATCACGTGTGACGGCGCTATGG +
Preference number: 3 (lower is better)
Translates to: VSLVLRAWQSSG*CSFLSRVTALW
Trigger: CCATAGCGCCGTCACACGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp ATGTGGGGCCCGTCTCCACCACCACTGTTTGTCCTGTaGGTGACAGTCCTTTTCACGCCAGGCTTTGTGTCC +
Preference number: 3 (lower is better)
Translates to: MWGPSPPPLFVL*VTVLFTPGFVS
Trigger: GGACACAAAGCCTGGCGTGAAAAGGACTGTCACGCACAGGACAAACAGTGGTGGTGGAGACGGGCCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp ATCACAGACCCTGCTCTAGCCGAGGGCCATGCCGTGTaGCTGTCCAGCACATTGCCTTATCTGGGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: ITDPALAEGHAV*LSSTLPYLGSV
Trigger: CACACTTCCCAGATAAGGCAATGTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGAGCAGGGTCTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp CCCTGGAGGTTCACTCAGGATGCATTACCTGCAGGTTaGGCTGTGTGTGTGTGGGCAGAAACGGCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PWRFTQDALPAG*AVCVWAETAVL
Trigger: CAGGACAGCCGTTTCTGCCCACACACACACAGCCCAACCTGCAGGTAATGCATCCTGAGTGAACCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp CCTGACAGCTTAATCACCCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCACTGTTTGTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: PDSLITLTLELM*GPSPPPLFVLC
Trigger: GCACAGGACAAACAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGTGACCACCGTCCCTTaGAAGTGCGGGTTGATGTGT +
Preference number: 3 (lower is better)
Translates to: FTCAEGVAEQRLLLISITVTTVP*KCGLMC
Trigger: ACACATCAACCCGCACTTCAAAGGGACGGTGGTCAC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp AACACACGGTCAGACGGCCGCCACCTCCAAGTGGAGTaGGCCACGCTACCACTAACACTGAACTCAAGCACA +
Preference number: 3 (lower is better)
Translates to: NTRSDGRHLQVE*ATLPLTLNSST
Trigger: TGTGCTTGAGTTCAGTGTTAGTGGTAGCGTGGCTCACTCCACTTGGAGGTGGCGGCCGTCTGACCGTGTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp CTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCTGCTaGTGCCGCCGTAACTCCTTCTGTTTCAGGATTTCT +
Preference number: 3 (lower is better)
Translates to: LSSSSFFLAPAC*CRRNSFCFRIS
Trigger: AGAAATCCTGAAACAGAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp CTGTGGCTTCCTGGGACTGACTGCTGCAACAGCCCCTaGAGCGTGCAGTGTTACTCTCAAGCACACAGCAAA +
Preference number: 3 (lower is better)
Translates to: LWLPGTDCCNSP*SVQCYSQAHSK
Trigger: TTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp ATCCTACAAGCGCTGTGGCTTCCTGGGACTGACTGCTaGAACAGCCCCTGCAGCGTGCAGTGTTACTCTCAA +
Preference number: 3 (lower is better)
Translates to: ILQALWLPGTDC*NSPCSVQCYSQ
Trigger: TTGAGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp GAAGTGCGGGTTGATGTGTATGTTCTTGGGCTGCTGTaGAGTCACGGGTGGCGGGGTCATCATCATCCTTGG +
Preference number: 3 (lower is better)
Translates to: EVRVDVYVLGLL*SHGWRGHHHPW
Trigger: CCAAGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACACATCAACCCGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp AGGTTGCTGAGGCTGAGGCTGATGCGGAGGGGGCAATaGAGGATGCAACGGCCCCTTCCATTTCCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: RLLRLRLMRRGQ*RMQRPLPFPKK
Trigger: TTTCTTTGGAAATGGAAGGGGCCGTTGCATCCTCCATTGCCCCCTCCGCATCAGCCTCAGCCTCAGCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TCTTGTCCAGAATTCGCCCTGACAACCTCAGGGTCTTaGGAAGGGTCAACCTGGCCCCATAGCTACCATCCC +
Preference number: 3 (lower is better)
Translates to: SCPEFALTTSGS*EGSTWPHSYHP
Trigger: GGGATGGTAGCTATGGGGCCAGGTTGACCCTTCCCAAGACCCTGAGGTTGTCAGGGCGAATTCTGGACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
3UTR-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCGGCCGGCAGCTCCCTaGAAGAAATTCCACAGTGTG +
Preference number: 3 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPRPAAP*KKFHSV
Trigger: CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp CCTTTGAAGTGCGGGTTGATGTGTATGTTCTTGGGCTaGTGTGGAGTCACGGGTGGCGGGGTCATCATCATC +
Preference number: 3 (lower is better)
Translates to: PLKCGLMCMFLG*CGVTGGGVIII
Trigger: GATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACACATCAACCCGCACTTCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GCTGAAACTGTTGGGAACAGGTCCAGGTGTATGCTGTaGAAATTCTGGAGGGCCTGGGAATCTCTGGGGTCC +
Preference number: 3 (lower is better)
Translates to: AETVGNRSRCML*KFWRAWESLGS
Trigger: GGACCCCAGAGATTCCCAGGCCCTCCAGAATTTCCACAGCATACACCTGGACCTGTTCCCAACAGTTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp TTGGCGCAGTGGGCTGCATTTGCTGCATGGGCCGCTTaGTTACATTCTGAGAAGTTGTATTATGCCGGAGCC +
Preference number: 3 (lower is better)
Translates to: LAQWAAFAAWAA*LHSEKLYYAGA
Trigger: GGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp TCACGTGTGACGGCGCTATGGGTAATTCACGCAAATTaGTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: SRVTALWVIHAN*CSLAQWAAFAA
Trigger: TGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp CATGCTGCCATCACACACGCTGACCTCCTTGTCCTGTaGAATTACATGACTAGGACCTGCCTTCGACAAGCG +
Preference number: 3 (lower is better)
Translates to: HAAITHADLLVL*NYMTRTCLRQA
Trigger: CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGCGTGTGTGATGGCAGCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp GCTACCACTAACACTGAACTCAAGCACAAGAGCTCCTaGGAAAGCAGAGGGGCGGGAAACAAAGAAGCGGGT +
Preference number: 3 (lower is better)
Translates to: ATTNTELKHKSS*ESRGAGNKEAG
Trigger: ACCCGCTTCTTTGTTTCCCGCCCCTCTGCTTTCGCAGGAGCTCTTGTGCTTGAGTTCAGTGTTAGTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp CGATGGTTGTGGGTATTGAGTGAGGTCGGACTGTGTTaGACTGTTCTAATCAGCGCTTTAAGGCGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: RWLWVLSEVGLC*TVLISALRRAC
Trigger: GCAGGCCCGCCTTAAAGCGCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTGCCTGTCCAGCACATaGCCTTATCTGGGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQACLSST*PYLGSV
Trigger: CACACTTCCCAGATAAGGCAATGTGCTGGACAGGCA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp TCACACACGCTGACCTCCTTGTCCTGTGCAATTACATaGCTAGGACCTGCCTTCGACAAGCGTCTGATGGTC +
Preference number: 3 (lower is better)
Translates to: SHTLTSLSCAIT*LGPAFDKRLMV
Trigger: GACCATCAGACGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGCGTGTGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp TCCTCACAGAGGACACCATCCTGGATCCCACGCCTGTaGAAAGCAAAGCTGGATTATAGAAACGAGCGGTGG +
Preference number: 3 (lower is better)
Translates to: SSQRTPSWIPRL*KAKLDYRNERW
Trigger: CCACCGCTCGTTTCTATAATCCAGCTTTGCTTTTCACAGGCGTGGGATCCAGGATGGTGTCCTCTGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp GGTGGTGGAGGGGGACTTCGCTGTTCCAGAAAAAGATaGCTCGGGAATCTTGGTTCACCTGAAACTCCTAAG +
Preference number: 3 (lower is better)
Translates to: GGGGGLRCSRKR*LGNLGSPETPK
Trigger: CTTAGGAGTTTCAGGTGAACCAAGATTCCCGAGCCATCTTTTTCTGGAACAGCGAAGTCCCCCTCCACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TGGGTAATTCACGCAAATTGCTGTTCCTTGGCGCAGTaGGCTGCATTTGCTGCATGGGCCGCTTGCTTACAT +
Preference number: 3 (lower is better)
Translates to: WVIHANCCSLAQ*AAFAAWAACLH
Trigger: ATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GGCTGCTGCTCATTTCTATCACGTGTGACGGCGCTATaGGTAATTCACGCAAATTGCTGTTCCTTGGCGCAG +
Preference number: 3 (lower is better)
Translates to: GCCSFLSRVTAL*VIHANCCSLAQ
Trigger: CTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGATAGAAATGAGCAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp AAAGCAGTTTCAATGATGACACAGACTCGTCTCATTTaGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCC +
Preference number: 3 (lower is better)
Translates to: KAVSMMTQTRLI*GWKKATLTPHA
Trigger: GGCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTCATCATTGAAACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAACAAAACGAAAAACTaGGAGTTCTTGGTGGTGACA +
Preference number: 3 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTNKTKN*EFLVVT
Trigger: TGTCACCACCAAGAACTCCAAGTTTTTCGTTTTGTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCATGCCTGTCCAGCACATaGCCTTATCTGGGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: PAACSVTLKHTANATLESCLSST*PYLGSV
Trigger: CACACTTCCCAGATAAGGCAATGTGCTGGACAGGCA...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAACAGACTCGTCTCATTaGGGGCTGGAAGAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: PAACSVTLKHTANATLESTDSSH*GLEESH
Trigger: GTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCCACATAATCAGCTATaGGTTTACCTTATGAGATAC +
Preference number: 3 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTPHNQL*VYLMRY
Trigger: GTATCTCATAAGGTAAACCAATAGCTGATTATGTGG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp GCAGCCCTGCTGGAACAGCCTTCAGAAAAACAGAGGTaGCTGAAGCAGTGGCCACCAAATTCCCAAAGAATG +
Preference number: 3 (lower is better)
Translates to: AALLEQPSEKQR*LKQWPPNSQRM
Trigger: CATTCTTTGGGAATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTTCTGAAGGCTGTTCCAGCAGGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp TCCACGAGGGTTTGGCTGGTGTGGGCTGACTTCACGTaGGCAGCATACCAAACACCTAAGTACCATTCCTTT +
Preference number: 3 (lower is better)
Translates to: STRVWLVWADFT*AAYQTPKYHSF
Trigger: AAAGGAATGGTACTTAGGTGTTTGGTATGCTGCTCACGTGAAGTCAGCCCACACCAGCCAAACCCTCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp GGCTCAGGGCACCCCTGTGTGCTGTGCGCGCGTTATTaGAAATGTTACCCACCTAAGAAAAGACTACAGAAC +
Preference number: 3 (lower is better)
Translates to: GSGHPCVLCARY*KCYPPKKRLQN
Trigger: GTTCTGTAGTCTTTTCTTAGGTGGGTAACATTTTCAATAACGCGCGCACAGCACACAGGGGTGCCCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp GATCCTGAAAAAGTTACCACAGCAGTTAACGCGAAGTaGACAAAGGGGTGGAACAGGCAACGGCATTCCCCC +
Preference number: 3 (lower is better)
Translates to: DPEKVTTAVNAK*TKGWNRQRHSP
Trigger: GGGGGAATGCCGTTGCCTGTTCCACCCCTTTGTTCACTTCGCGTTAACTGCTGTGGTAACTTTTTCAGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCTGTGGCGGGGGCTGTaGCTGAGGTTGCTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPLWRGL*LRLLRL
Trigger: CAGCCTCAGCAACCTCAGCAACAGCCCCCGCCACAG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGTACAGCTGCTGCTGTaGCTGCGCGAGTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPVQLLL*LRESLQ
Trigger: CTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTAC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TGCTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGCATaGGCCGCTTGCTTACATTCTGAGAAGTTGTATTAT +
Preference number: 3 (lower is better)
Translates to: CCSLAQWAAFAA*AACLHSEKLYY
Trigger: ATAATACAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGGTCATCATCATCCTaGGGGTCTCTAGCTGGGGAG +
Preference number: 3 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGSSSS*GSLAGE
Trigger: CTCCCCAGCTAGAGACCCCAAGGATGATGATGACCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp AACAAGAAGTCTGTTCTTCACATTTTGTCTGACCTGTaGACCTGGAAAGGGCAACAGTGGGTTACCGTTGGT +
Preference number: 3 (lower is better)
Translates to: NKKSVLHILSDL*TWKGQQWVTVG
Trigger: ACCAACGGTAACCCACTGTTGCCCTTTCCAGGTGCACAGGTCAGACAAAATGTGAAGAACAGACTTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp CCAACCACCCCACTCACACCCTGGCTTTCCAGGGTATaGAAAGGTCAATCAACAATCACCCAAATTTTAATC +
Preference number: 3 (lower is better)
Translates to: PTTPLTPWLSRV*KGQSTITQILI
Trigger: GATTAAAATTTGGGTGATTGTTGATTGACCTTTGCATACCCTGGAAAGCCAGGGTGTGAGTGGGGTGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGCTGGCTGAAACTGTaGGGAACAGGTCCAGGTGTA +
Preference number: 3 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGWLKL*GTGPGV
Trigger: TACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATACACTGGCTGCTGTCCTaGCTGATTAAATGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIHWLLS*LIKCWS
Trigger: GGACCAGCATTTAATCAGCAAGGACAGCAGCCAGTG...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAAAAAACTTGGAGTTCTaGGTGGTGACAAGAGAATGT +
Preference number: 3 (lower is better)
Translates to: PAACSVTLKHTANATLESKNLEF*VVTREC
Trigger: ACATTCTCTTGTCACCACCAAGAACTCCAAGTTTTT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp ACTAAGAATCCATTTTCGATGGTTGTGGGTATTGAGTaGGGTCGGACTGTGTTGGACTGTTCTAATCAGCGC +
Preference number: 3 (lower is better)
Translates to: TKNPFSMVVGIE*GRTVLDCSNQR
Trigger: GCGCTGATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp ACTAGGACCTGCCTTCGACAAGCGTCTGATGGTCTATaGGCACATTCCGCTTACCTTCCCAATAAAATAACA +
Preference number: 3 (lower is better)
Translates to: TRTCLRQASDGL*AHSAYLPNKIT
Trigger: TGTTATTTTATTGGGAAGGTAAGCGGAATGTGCTCATAGACCATCAGACGCTTGTCGAAGGCAGGTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR GCA 72 bp TGTTGGACTGTTCTAATCAGCGCTTTAAGGCGGGCCTaGATGACTTTGCCAATCACCTTTCAAGAACATTCT +
Preference number: 3 (lower is better)
Translates to: CWTVLISALRRA*MTLPITFQEHS
Trigger: AGAATGTTCTTGAAAGGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGCGCTGATTAGAACAGTCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp TACTGGGATTGTCTGGTACTAAGAATCCATTTTCGATaGTTGTGGGTATTGAGTGAGGTCGGACTGTGTTGG +
Preference number: 3 (lower is better)
Translates to: YWDCLVLRIHFR*LWVLSEVGLCW
Trigger: CCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATGCATTACCTGCAGGTaGGGCTGTGTGTGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGCITCR*GCVCVG
Trigger: GCCCACACACACACAGCCCAACCTGCAGGTAATGCA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGTGCCTCTTCTTTAGGTaGAGCCACAGGGCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: SLSDITLFPHLHQETLFLCLFFR*SHRASW
Trigger: CCAGCTAGCCCTGTGGCTCAACCTAAAGAAGAGGCA...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR TCA 72 bp ATGCTACCAGCAGAAGGTATACCTGGGGATCCAATATaGATCAGTGAGTTCCGCTTTAGTTCCAGTACACAA +
Preference number: 3 (lower is better)
Translates to: MLPAEGIPGDPI*ISEFRFSSSTQ
Trigger: TTGTGTACTGGAACTAAAGCGGAACTCACTGATTCATATTGGATCCCCAGGTATACCTTCTGCTGGTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp TATGCAGCGGCTGAGTCTGACTTTGAGGAACTGTTCTaGTCTGTCTCAAATGTTTCAGTGCTTTCATCTGTT +
Preference number: 3 (lower is better)
Translates to: YAAAESDFEELF*SVSNVSVLSSV
Trigger: AACAGATGAAAGCACTGAAACATTTGAGACAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCGCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp GATTGTCTGGTACTAAGAATCCATTTTCGATGGTTGTaGGTATTGAGTGAGGTCGGACTGTGTTGGACTGTT +
Preference number: 3 (lower is better)
Translates to: DCLVLRIHFRWL*VLSEVGLCWTV
Trigger: AACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAGACAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGAAGAAAAGAAGTAACTaGGCTCCACATAATCAGCTA +
Preference number: 3 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRKKRSN*APHNQL
Trigger: TAGCTGATTATGTGGAGCCAAGTTACTTCTTTTCTT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CCA 72 bp CTTTCATCTGTTGTCCTTGATACTGCATGTTGGCACTaGATGGTACAAAATTGGATGTTTTGGGCTGAACGT +
Preference number: 3 (lower is better)
Translates to: LSSVVLDTACWH*MVQNWMFWAER
Trigger: ACGTTCAGCCCAAAACATCCAATTTTGTACCATCCAGTGCCAACATGCAGTATCAAGGACAACAGATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CCA 72 bp TGTTTGCCCAGAATGAATTCTACTACAGTAGCTTTATaGAGAATATGTCTCACCTACAGGAACCTACCCGCA +
Preference number: 3 (lower is better)
Translates to: CLPRMNSTTVAL*RICLTYRNLPA
Trigger: TGCGGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCTGGGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR-3UTR CAA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAGGTAATTCACGCAAATaGCTGTTCCTTGGCGCAGTG +
Preference number: 3 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGGNSRK*LFLGAV
Trigger: CACTGCGCCAAGGAACAGCAATTTGCGTGAATTACC...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAACAGGGCTAGCTGGCTaGACTTTCACTTCCGTCTTT +
Preference number: 3 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGTGLAG*TFTSVF
Trigger: AAAGACGGAAGTGAAAGTCAAGCCAGCTAGCCCTGT...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCTTTCATCTGTTGTCCTaGATACTGCATGTTGGCACT +
Preference number: 3 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPFHLLS*ILHVGT
Trigger: AGTGCCAACATGCAGTATCAAGGACAACAGATGAAA...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR-3UTR CAA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCAACAAAACGAAAAACTaGGAGTTCTTGGTGGTGACA +
Preference number: 3 (lower is better)
Translates to: NSTTVALWRICLTYRNLPNKTKN*EFLVVT
Trigger: TGTCACCACCAAGAACTCCAAGTTTTTCGTTTTGTT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR TCA 72 bp TGTCTCAAATGTTTCAGTGCTTTCATCTGTTGTCCTTaGTACTGCATGTTGGCACTGGATGGTACAAAATTG +
Preference number: 3 (lower is better)
Translates to: CLKCFSAFICCP*YCMLALDGTKL
Trigger: CAATTTTGTACCATCCAGTGCCAACATGCAGTATCAAGGACAACAGATGAAAGCACTGAAACATTTGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR GCA 72 bp CTCGAGTTAAGCTTGGTTGAGAAGACTCTTCTAACCTaGACTGAAGATAAGTGCAACCATTATCAAATATTC +
Preference number: 3 (lower is better)
Translates to: LELSLVEKTLLT*TEDKCNHYQIF
Trigger: GAATATTTGATAATGGTTGCACTTATCTTCAGTGCAGGTTAGAAGAGTCTTCTCAACCAAGCTTAACTCGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGACCGGAAGCAGCGGCTaGAGCGGCTGCGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLTGSSG*SGCGWN
Trigger: GTTCCAGCCGCAGCCGCTGCAGCCGCTGCTTCCGGT...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGTCCTGGGGCCGGCCCTaGATGGACGCCACTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLSWGRP*MDATRG
Trigger: TCCTCGAGTGGCGTCCATCCAGGGCCGGCCCCAGGA...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGGGCACTGCATCCGGCTaGTGCTGGCCTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLGTASG*CWPEAE
Trigger: CTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCC...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTTGGCGCTGGGGGCACTaGATCCGGCTGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGWRWGH*IRLLLA
Trigger: GGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCA...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGTTATGCCGGAGCCCCTaGCGCTGGGGGCACTGCATC +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLLCRSP*RWGHCI
Trigger: GATGCAGTGCCCCCAGCGCCAGGGGCTCCGGCATAA...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGCCAGGCTTTGTGTCCTaGGGCCGGCCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLPGFVS*GRPWMD
Trigger: GTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGG...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGCTTGGCGCAGTGGGCTaGATTTGCTGCATGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLLGAVG*ICCMGR
Trigger: GCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAG...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGCAGAAACGGCTGTCCTaGGCCTGGCAGGAACGGCTG +
Preference number: 4 (lower is better)
Translates to: LALGALHPAAAGLRLSGLQKRLS*AWQERL
Trigger: CAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTG...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGGCCCGCGAGGGTGGTaGCGCGCTGACGATAGGTTT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGGPRGW*RADDRF
Trigger: AAACCTATCGTCAGCGCGTCACCACCCTCGCGGGCC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTAGCGGCTGCAGCGGCTaGGGCTGGAACAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGSGCSG*GWNRLL
Trigger: CAGAAGCCTGTTCCAGCCGCAGCCGCTGCAGCCGCT...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTGGCGGGGATGGGTGGTaGGGGTGCTGCACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCGGDGW*GCCTGS
Trigger: GCTTCCGGTGCAGCACCCGCACCACCCATCCCCGCC...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGGCGGGGATGGGTGGTaGGGGTGCTGCACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGGGDGW*GCCTGS
Trigger: GCTTCCGGTGCAGCACCCGCACCACCCATCCCCGCC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGTGGTGCGGGGGCTGGTaGGGAGGCTGGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQWCGGW*GGWCCG
Trigger: GCCACAGCACCAGCCTCCGCACCAGCCCCCGCACCA...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGAGGGACAGGCGAGTGTaGGTGGGGCCCCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGRDRRV*VGPRWQ
Trigger: CTGCCAGCGGGGCCCCACGCACACTCGCCTGTCCCT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGCTCTCCACTGGTCCTaGAGAGGGAGTCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGALHWS*RGSRGG
Trigger: GCCCCCACGACTCCCTCTCCAGGACCAGTGGAGAGC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTTGCTCCTGGGGGTTCTaGGCCGGCCGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVACSWGF*AGRQLP
Trigger: AGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGTGCTCCTGGGGGTTCTaGGCCGGCCGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVCSWGF*AGRQLP
Trigger: AGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCACCCTCACCCCGCATaGCACGGGGAACGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLHPHPA*HGERQA
Trigger: GGCCTGCCGTTCCCCGTGGCATGCGGGGTGAGGGTG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGTTCTTGGGCTGCTGTaGAGTCACGGGTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGVLGLL*SHGWRG
Trigger: ACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAAC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTCGGAGGCTGGTGCTGTaGCGGGGGCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCRRLVL*RGLLLR
Trigger: CCTCAGCAACAGCCCCCGCCACAGCACCAGCCTCCG...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGAGAGACCTGTGCTCCTaGGGGTTCTGCGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGRDLCS*GFCAGR
Trigger: CCGGCCGGCGCAGAACCCCCAGGAGCACAGGTCTCT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGGTGGAGGGGGAGCCTaGGGCACGACAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGGGGGA*GTTGGC
Trigger: ACAGCCTCCTGTCGTGCCCCAGGCTCCCCCTCCACC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTGGCATGTGCATTCCCTaGGGCGGGGATGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCGMCIP*GGDGWC
Trigger: GCACCACCCATCCCCGCCTCAGGGAATGCACATGCC...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGATGGGTGGTGCGGGTaGTGCACCGGAAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLDGWCG*CTGSSG
Trigger: GCCGCTGCTTCCGGTGCAGCACCCGCACCACCCATC...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTGGCGCTGGGGGCACTaGATCCGGCTGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPWRWGH*IRLLLA
Trigger: GGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGGAGCGTACAGCTGCTaGTGTTGCTGCGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGGAYSC*CCCASL
Trigger: GAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGCCCGGAGAGACCTGTaGTCCTGGGGGTTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLARRDL*SWGFCA
Trigger: GGCGCAGAACCCCCAGGAGCACAGGTCTCTCCGGGC...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCCCGGAGAGACCTGTaGTCCTGGGGGTTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAARRDL*SWGFCA
Trigger: GGCGCAGAACCCCCAGGAGCACAGGTCTCTCCGGGC...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCGGAGGCTGGTGCTGTaGCGGGGGCTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVARRLVL*RGLLLR
Trigger: CCTCAGCAACAGCCCCCGCCACAGCACCAGCCTCCG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGCCACTCGAGGAGTCTaGGGGACAGCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGATRGV*GTAGSS
Trigger: GGAGGAGCCAGCTGTCCCCCAGACTCCTCGAGTGGC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGACACCACGCAGGGCTaGGGCTTGCACTCCACCACC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQDTTQG*GLHSTT
Trigger: GGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp GAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTaGGCTGGGACACTCTGGAGCAGAGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: EAGLTGNPIFRG*AGTLWSRGGGS
Trigger: GCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAACCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTCGGTGCACCCTGGGATaGTGGAGGCCGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPLSGRQPQLPSQPSLPTRCTLG*WRPGGG
Trigger: CCCGCCTCCCGGCCTCCATCATCCCAGGGTGCACCG...AGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR TCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGTGGCTTCCTGGGACTaGCTGCTGCAACAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGVASWD*LLQQPL
Trigger: CAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCAC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGACCGGACCTGGAGGCTaGAAGGCTGGTCGTACGGGC +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVTGPGG*KAGRTG
Trigger: GCCCGTACGACCAGCCTTGCAGCCTCCAGGTCCGGT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGGGGGCAATGGAGGATaGAACGGCCCCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGGGNGG*NGPFHF
Trigger: GAAATGGAAGGGGCCGTTGCATCCTCCATTGCCCCC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp ACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAAGCTGGTGGGCCGACGTaGCTGGTCCGGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: THSKVRPLSGRQPQLPSQAGGPT*LVRARV
Trigger: TACCCGGGCCCGGACCAGGCACGTCGGCCCACCAGC...TTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTAAGGCAGGGTGCGGGTaGCTACGGAGGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAKAGCG*LRRLLP
Trigger: AGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCTGTGGAGTCACGGGTaGCGGGGTCATCATCATCCT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGLWSHG*RGHHHP
Trigger: AGGATGATGATGACCCCGCCACCCGTGACTCCACAG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCTCTCCACTGGTCCTaGAGAGGGAGTCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAALHWS*RGSRGG
Trigger: GCCCCCACGACTCCCTCTCCAGGACCAGTGGAGAGC...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTGGTGGGGCTCTCCACTaGTCCTGGAGAGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCGGALH*SWRGSR
Trigger: ACGACTCCCTCTCCAGGACCAGTGGAGAGCCCCACC...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGCGGCTGTCCTGGGCCTaGCAGGAACGGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVRLSWA*QERLSR
Trigger: CCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCTTGTGCTGAGGGCGTaGCAGAGCAGCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSLVLRA*QSSGCC
Trigger: GCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAG...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGCTTGTGCTGAGGGCGTaGCAGAGCAGCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVLVLRA*QSSGCC
Trigger: GCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAG...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTTTCCCTGTGAGCTTCTaGAACCCGCCACGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAFPVSF*NPPRPA
Trigger: CGCGGGCCGTGGCGGGTTCCAGAAGCTCACAGGGAA...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTCGCCGCGGTGCACCCTaGGATGATGGAGGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HSKVRPLSGRQPQLPSQPRRGAP*DDGGRE
Trigger: CTCCCGGCCTCCATCATCCCAGGGTGCACCGCGGCG...AGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCTTGCGGGCAGGCTGTaGTCCCACTTCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLLAGRL*SHFRRL
Trigger: CAGCCTCCGGAAGTGGGACCACAGCCTGCCCGCAAG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTACAGGCGAGTGTGCGTaGGGCCCCGCTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVATGECA*GPAGRC
Trigger: ACATCTGCCAGCGGGGCCCCACGCACACTCGCCTGT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGGCTGGGCATCCGTGGTaGACGAGGACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVAGHPW*TRTAPP
Trigger: TGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGC...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTCAGCTGGGCATCCGTaGTGGACGAGGACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGSAGHP*WTRTAP
Trigger: AGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGA...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGACTCTGGAGCAGAGGTaGCGGCAGCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGTLEQR*RQHSCR
Trigger: CCTGCAGCTGTGCTGCCGCCACCTCTGCTCCAGAGT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGTCGTGGGGGCTGGCTaGAACTGTTGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQVVGAG*NCWEQV
Trigger: GACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGAC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTGGTGCGGGGGCTGGTaGGGAGGCTGGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITWCGGW*GGWCCG
Trigger: GCCACAGCACCAGCCTCCGCACCAGCCCCCGCACCA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCTGGCACCAGCCTGCTaGTGCCGCCGTAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLLAPAC*CRRNSF
Trigger: GAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTTGGTCAGCGTCACCTTaGGGGCAGGCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAWSASP*GQAVVP
Trigger: TGGGACCACAGCCTGCCCGCAAGGTGACGCTGACCA...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTCTAGCCGAGGGCCATaGCGTGTGCCTGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLSSRGP*RVPVQH
Trigger: GTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGATGGGCACACAGACCTaGTCCCTGGACAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGMGTQT*SLDSLL
Trigger: CAGGAGGCTGTCCAGGGAGCAGGTCTGTGTGCCCAT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGAGGCCATCCAGCGGATaGCCCTGTGCCGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLRPSSG*PCAAKH
Trigger: GTGTTTGGCGGCACAGGGGCATCCGCTGGATGGCCT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGGATGCAACGGCCCCTaGAGGTTGGGCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQGCNGP*RLGCVC
Trigger: ACACACACAGCCCAACCTGCAGGGGCCGTTGCATCC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGACGGCAGGTCTCGGCTaGCTCGGAACTGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQTAGLG*LGTGSK
Trigger: CTTGCTACCAGTTCCGAGCCAGCCGAGACCTGCCGT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGAATCCCCACCGGACCTaGAGGCTGCAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVNPHRT*RLQGWS
Trigger: CGACCAGCCTTGCAGCCTCCAGGTCCGGTGGGGATT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCGCATTACCTGCAGGTTaGGCTGTGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCALPAG*AVCVWA
Trigger: TGCCCACACACACACAGCCCAACCTGCAGGTAATGC...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGGCTGGTGCGGAGGCTaGTGCTGTGGCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITGWCGG*CCGGGC
Trigger: ACAGCCCCCGCCACAGCACCAGCCTCCGCACCAGCC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGCTGGTGCGGGGGCTaGTGCGGAGGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGWCGG*CGGWCC
Trigger: ACAGCACCAGCCTCCGCACCAGCCCCCGCACCAGCC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GGGTCTTGGGAAGGGTCAACCTGGCCCCATAGCTACCATCCCCATGCCACCTTTCACCAAGCCAGCTGGTaGGCCGACGTGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSWEGSTWPHSYHPHATFHQASW*ADVPGP
Trigger: CGGACCAGGCACGTCGGCCCACCAGCTGGCTTGGTG...AAAGGTGGCATGGGGATGGTAGCTATGGGGCCAGGTTGACCCTTCCCAAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CCA 90 bp GGGTCTTGGGAAGGGTCAACCTGGCCCCATAGCTACCATCCCCATGCCACCTTTCCCCACCAAGCCAGCTaGTGGGCCGACGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSWEGSTWPHSYHPHATFPHQAS*WADVPG
Trigger: ACCAGGCACGTCGGCCCACCAGCTGGCTTGGTGGGG...AAAGGTGGCATGGGGATGGTAGCTATGGGGCCAGGTTGACCCTTCCCAAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCAGGTTCTGCTTGTTTaGCATCAGGCGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLQVLLV*HQAPPA
Trigger: GGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGACACCACGCAGGGCTaGGGCTTGCACTCCACCACC +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPDTTQG*GLHSTT
Trigger: GGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGCTGGGCATCCGTGGTaGACGAGGACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTAGHPW*TRTAPP
Trigger: TGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTCAGCTGGGCATCCGTaGTGGACGAGGACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLSAGHP*WTRTAP
Trigger: AGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTGCCTTGGCCTCTGCTaGAAGCTCCAAAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCCLGLC*KLQSFW
Trigger: CCAGAAACTTTGGAGCTTTCAGCAGAGGCCAAGGCA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCAAAGGGTCTCGATCCTaGGGCGGGGGTGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACKGSRS*GGGGAL
Trigger: GAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTT...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTGTTTGTCCTGTGCGTaGCAGTCCTTTTCACGCCAG +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCCLSCA*QSFSRQ
Trigger: CTGGCGTGAAAAGGACTGTCACGCACAGGACAAACA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCCTCCTGCAGGCATGGTaGGGCAGGGCTGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPLLQAW*GRADWQ
Trigger: TTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAG...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGACCGACCGGACTGGATaGCCTCCCCTGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLTDRTG*PPLISQ
Trigger: CTGGCTTATCAGGGGAGGTCATCCAGTCCGGTCGGT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGCTGATCACCACCCAGTaGAGACGTTCCCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVLITTQ*RRSPPP
Trigger: TGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAG...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGCCAGGCTGGCTAAAGTaGAGAATCCCCACCGGACCT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGPGWLK*RIPTGP
Trigger: AGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGG...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTGAGGTTCACTCAGGATaGATTACCTGCAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGEVHSG*ITCRLG
Trigger: GCCCAACCTGCAGGTAATGCATCCTGAGTGAACCTC...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGTGGTGCTGCGGCGGGTaGTGTGGTGGGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGWCCGG*CGGCWG
Trigger: ACCCCAGCACCCACCACAGCACCCGCCGCAGCACCA...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTTGGCAGAGCAGCGGCTaGTGCTCATTTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGWQSSG*CSFLSR
Trigger: ACGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCA...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGACCACCCGCAGGTTCTaGTTGTTTGGCATCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQTTRRF*LFGIRR
Trigger: GCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCATCTAGCCGAGGGCCATaGCGTGTGCCTGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPSSRGP*RVPVQH
Trigger: GTGCTGGACAGGCACACGGCATGGCCCTCGGCTAGA...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTGGCGGCAGCACAGCTaGAGGGTCCTAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLWRQHS*RVLADP
Trigger: AGGATCTGCTAGGACCCTGCAGCTGTGCTGCCGCCA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTCCAGCAAGGCAGGGTaGGGGTGCCTACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACSSKAG*GCLRRL
Trigger: CAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGGA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCACCAGAGCCACCCGGTaGAGCCCGCAGAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTTRATR*SPQSVH
Trigger: GTGTACACTCTGCGGGCTGCACCGGGTGGCTCTGGT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGCCGTCCTCCCCGCCTaGAGCTGTAGCGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPAVLPA*SCSVLV
Trigger: AACAAGGACGCTACAGCTCCAGGCGGGGAGGACGGC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCAGCAGCGCAGGTCTGTaGTCCTTCATCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSSSAGL*SFILPL
Trigger: GAGGGGCAGGATGAAGGACCACAGACCTGCGCTGCT...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTCCCTGAGGCGGGGATaGGTGGTGCGGGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPSLRRG*VVRVLH
Trigger: GTGCAGCACCCGCACCACCCATCCCCGCCTCAGGGA...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGCGGCGGGTGCTGTaGTGGGTGCTGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPLRRVL*WVLGWG
Trigger: CCCCCACCCCAGCACCCACCACAGCACCCGCCGCAG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGGGCCGGCCCTGGATaGACGCCACTCGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGAGPG*TPLEES
Trigger: AGACTCCTCGAGTGGCGTCCATCCAGGGCCGGCCCC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLTLELM*GPSPPP
Trigger: TGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTCAAACTACCGCAACATaGCCGCGCGCCCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GHSPDGSRNYLVNLLCLLQTTAT*PRARAR
Trigger: GCGGGCGCGGGCGCGCGGCCATGTTGCGGTAGTTTG...AAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR CCA 90 bp AAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCACCAAGCCAGCTGGTaGGCCGACGTGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: KSGHSPDGSRNYLVNLLCHQASW*ADVPGP
Trigger: CGGACCAGGCACGTCGGCCCACCAGCTGGCTTGGTG...GCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACCCCGCTGGCAGATGTaGGGGCTGCTGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESPRWQM*GLLEAP
Trigger: GGGGGCCTCCAGCAGCCCCCACATCTGCCAGCGGGG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCCACCACCTCATGTGTaGTGGGAACTAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQPPPHV*WELGQR
Trigger: CCTCTGGCCTAGTTCCCACCACACATGAGGTGGTGG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAACTCTGGAGCAGAGGTaGCGGCAGCACAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPTLEQR*RQHSCR
Trigger: CCTGCAGCTGTGCTGCCGCCACCTCTGCTCCAGAGT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTTGGCTGGGACACTCTaGAGCAGAGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPLAGTL*SRGGGS
Trigger: GCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGCCGCCACCTCCAAGTaGAGTGAGCCACGCTACCAC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPAATSK*SEPRYH
Trigger: GTGGTAGCGTGGCTCACTCCACTTGGAGGTGGCGGC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTACCAGTGAAAACCCATaGAGCAGAAGCCGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCTSENP*SRSRSA
Trigger: TGCCGACCGGCTTCTGCTTCATGGGTTTTCACTGGT...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGCCTCTTCTTTAGGTTaGGCCACAGGGCTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSASSLG*ATGLAG
Trigger: GCCAGCTAGCCCTGTGGCTCAACCTAAAGAAGAGGC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTTCAACTTACCCCACCTaGCAGCTTAATCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGSTYPT*QLNHPD
Trigger: GTCAGGGTGATTAAGCTGTCAGGTGGGGTAAGTTGA...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCACCTCCAAGTGGAGTaGGCCACGCTACCACTAACA +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQHLQVE*ATLPLT
Trigger: TGTTAGTGGTAGCGTGGCTCACTCCACTTGGAGGTG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTCAGGATGCATTACCTaGAGGTTGGGCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCSGCIT*RLGCVC
Trigger: ACACACACAGCCCAACCTGCAGGTAATGCATCCTGA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGACTGCATCCGGCTGCTaGTGGCCTGAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGTASGC*WPEAER
Trigger: CCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGT...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTTCCTGGCACCAGCCTaGTGCTGCCGCCGTAACTCC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACFLAPA*CCRRNS
Trigger: GGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAGGAA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGATGGTGACAGTGCCTaGTCTTCCTGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSDGDSA*SSCSAG
Trigger: CCCAGCAGAGCAGGAAGAGCAGGCACTGTCACCATC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCCCACTGTTTGTCCTGTaGGTGACAGTCCTTTTCACG +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCPLFVL*VTVLFT
Trigger: CGTGAAAAGGACTGTCACGCACAGGACAAACAGTGG...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTCGGGCGGTGGGCGTaGAACGCAAACACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SKVRPLSGRQPQLPSQPSFGRWA*NANTRQ
Trigger: CTGCCGCGTGTTTGCGTTGCACGCCCACCGCCCGAA...AGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR GCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATGCTCCTGGGGGTTCTaGGCCGGCCGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESCSWGF*AGRQLP
Trigger: AGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAGCA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCGGGGGCAATGGAGGATaGAACGGCCCCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACGGNGG*NGPCRL
Trigger: CAACCTGCAGGGGCCGTTGCATCCTCCATTGCCCCC...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGGCCTGGGAATCTCTaGGGTCCCACGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGPGNL*GPTAGL
Trigger: GAGACCTGCCGTGGGACCCCAGAGATTCCCAGGCCC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTGGGCTGTGTGTGTGTaGGCAGAAACGGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLWAVCV*AETAVL
Trigger: CAGGACAGCCGTTTCTGCCCACACACACACAGCCCA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGGCTGGTGCGGAGGCTaGTGCTGTGGCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAGWCGG*CCGGGC
Trigger: ACAGCCCCCGCCACAGCACCAGCCTCCGCACCAGCC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTTGTTCCTTGGCGCAGTaGGCTGCATTTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCCSLAQ*AAFAAW
Trigger: CCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACA...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTTCCCTGTGAGCTTCTaGAACCCGCCACGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPFPVSF*NPPRPA
Trigger: CGCGGGCCGTGGCGGGTTCCAGAAGCTCACAGGGAA...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGTGGGTTACCGTTGGTaGGTGATGGTGACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQVGYRW*VMVTVP
Trigger: AGGCACTGTCACCATCACCCACCAACGGTAACCCAC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTTCGCGGTCCACAGCTaGCCCTTCGCCTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPLSGRQPQLPSQPSLPTFAVHS*PFASAG
Trigger: TCCTGCGGAGGCGAAGGGCCAGCTGTGGACCGCGAA...AGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCCCACTTCCGGAGGCTaGGGAAGCCGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPPTSGG*GSRWGW
Trigger: CCAGCCCCAGCGGCTTCCCCAGCCTCCGGAAGTGGG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCCCCGCTGGCAGATGTaGGGGCTGCTGGAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQPRWQM*GLLEAP
Trigger: GGGGGCCTCCAGCAGCCCCCACATCTGCCAGCGGGG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTCAGCTGGGCATCCGTaGTGGACGAGGACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACSAGHP*WTRTAP
Trigger: AGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCAGCAGGCTCTTCAGCTaGGCATCCGTGGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPSRLFS*ASVVDE
Trigger: CTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCT...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGGCTGGCTGGCGCTCTaGAGAACAGTTACGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPGWLAL*RTVTQD
Trigger: GTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGGCTGGCTGGCGCTCTaGAGAACAGTTACGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTGWLAL*RTVTQD
Trigger: GTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTNQARG*LALWRT
Trigger: TGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCCACCTCATGTGTGGTaGGAACTAGGCCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLPPHVW*ELGQRA
Trigger: AGCCCTCTGGCCTAGTTCCCACCACACATGAGGTGG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCCACCACCTCATGTGTaGTGGGAACTAGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAPPPHV*WELGQR
Trigger: CCTCTGGCCTAGTTCCCACCACACATGAGGTGGTGG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCCATCTTCCGAGGGTTaGCTGGGACACTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAPSSEG*LGHSGA
Trigger: TGCTCCAGAGTGTCCCAGCCAACCCTCGGAAGATGG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCCACGAGGGTTTGGCTaGTGTGGGCTGACTTCACGT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLPRGFG*CGLTSR
Trigger: ACGTGAAGTCAGCCCACACCAGCCAAACCCTCGTGG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGAGGCCTCTCCTCACCTaGGTCTGTCCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLRPLLT*VCPSLP
Trigger: AGGAAGGGATGGACAGACCCAGGTGAGGAGAGGCCT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGCTGGAACAGGCTTCTaGTCGGCTGCTGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGAGTGF*SAAAEA
Trigger: CGCCTCAGCAGCAGCCGATCAGAAGCCTGTTCCAGC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCAATGGTAGAGGACTCTaGGTAGGAACAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCNGRGL*VGTGWL
Trigger: TAGCCATCCTGTTCCTACTCAGAGTCCTCTACCATT...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTCTTCACATTTTGTCTaGCCTGTGCACCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCSSHFV*PVHLER
Trigger: CCTTTCCAGGTGCACAGGTCAGACAAAATGTGAAGA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGAACGGCAGGCCAGAGTaGACATCCGCTGATGAACAG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVNGRPE*TSADEQ
Trigger: CTGTTCATCAGCGGATGTTCACTCTGGCCTGCCGTT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGTTGGCTGGTGTGGGCTaGCTTCACGTGAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVLAGVG*LHVSSI
Trigger: TATGCTGCTCACGTGAAGTCAGCCCACACCAGCCAA...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGACGTCAAGCCATAGCTaGGGCCTACAAGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVTSSHS*GLQVGR
Trigger: CCTCCCTACTTGTAGGCCTCAGCTATGGCTTGACGT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTGGAGTTCTCAAGGCTaGGGCGGAGCAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACWSSQG*GGAEWQ
Trigger: CTGCCACTCTGCTCCGCCTCAGCCTTGAGAACTCCA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTGTATGTTCTTGGGCTaGTGTGGAGTCACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSCMFLG*CGVTGG
Trigger: GCCACCCGTGACTCCACAGCAGCCCAAGAACATACA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTGGTGCTGCGGCGGGTaGTGTGGTGGGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAWCCGG*CGGCWG
Trigger: ACCCCAGCACCCACCACAGCACCCGCCGCAGCACCA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGTGGGCTGCATTTGCTaGATGGGCCGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSVGCIC*MGRLLT
Trigger: TGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCAC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGCAGTGGGCTGCATTTaGTGCATGGGCCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTAVGCI*CMGRLL
Trigger: AAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTGGCTCCTCCACATCTaGAGGTTTGATCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSWLLHI*RFDREH
Trigger: GTGCTCCCGATCAAACCTGCAGATGTGGAGGAGCCA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGCCCGGAGAGACCTGTaGTCCTGGGGGTTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAARRDL*SWGFCA
Trigger: GGCGCAGAACCCCCAGGAGCACAGGTCTCTCCGGGC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGACACCAACTCCAGCCTaGTGTGTCCTGTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLTPTPA*CVLSVR
Trigger: CCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCACTAGGCCAGAGGGCTaGCAGGTGAGGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACTRPEG*QVRPSQ
Trigger: CTGTGATGGCCTCACCTGGCAGCCCTCTGGCCTAGT...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCTTCCTGGGACTGACTaGTGCAACAGCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACLPGTD*CNSPCS
Trigger: GCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTGGCGGCAGCACAGCTaGAGGGTCCTAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACWRQHS*RVLADP
Trigger: AGGATCTGCTAGGACCCTGCAGCTGTGCTGCCGCCA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCAGCGGATGCCCCTGTaGCGCCAAACACCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPQRMPL*RQTPWP
Trigger: GGGCCAGGGTGTTTGGCGGCACAGGGGCATCCGCTG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGACCCACAAAGGGCACTaGAGACACCGCACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVTHKGH*RHRTRN
Trigger: ATTCCTGGTGCGGTGTCTGCAGTGCCCTTTGTGGGT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCAGGGCACCCCTGTGTaGTGTGCGCGCGTTATTGAA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTQGTPV*CARVIE
Trigger: TTCAATAACGCGCGCACAGCACACAGGGGTGCCCTG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCACAGGGCACCCCTGTGTaGTGTGCGCGCGTTATTGAA +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPQGTPV*CARVIE
Trigger: TTCAATAACGCGCGCACAGCACACAGGGGTGCCCTG...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCGTCAACTCAGCTTCGTaGCCTTCATACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCVNSAS*PSYCPS
Trigger: AGAAGGACAGTATGAAGGCCACGAAGCTGAGTTGAC...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTGCCGTCCTCCCCGCCTaGAGCTGTAGCGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPAVLPA*SCSVLV
Trigger: AACAAGGACGCTACAGCTCCAGGCGGGGAGGACGGC...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCTTGGGGTCTCTAGCTaGGGAGGCATGTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTLGVSS*GGMCIP
Trigger: GGGAATGCACATGCCTCCCCAGCTAGAGACCCCAAG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCTGTGGAGTCACGGGTaGCGGGGTCATCATCATCCT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTLWSHG*RGHHHP
Trigger: AGGATGATGATGACCCCGCCACCCGTGACTCCACAG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTCCAGGTGTATGCTGTaGAAATTCTGGAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGSRCML*KFWRAW
Trigger: CCAGGCCCTCCAGAATTTCCACAGCATACACCTGGA...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTAATCCCCACCGGACCTaGAGGCTGCAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPNPHRT*RLQGWS
Trigger: CGACCAGCCTTGCAGCCTCCAGGTCCGGTGGGGATT...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGGTGAGGCCGGAACTGTaGCTGAGACATCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVVRPEL*LRHRHQ
Trigger: TTGATGCCGATGTCTCAGCCACAGTTCCGGCCTCAC...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGTCTGACCTGTGCACCTaGAAAGGGCAACAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQSDLCT*KGQQWV
Trigger: AACCCACTGTTGCCCTTTCCAGGTGCACAGGTCAGA...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCGTGTTTCGGGCGGTaGGCGTGCAACGCAAACACG +
Preference number: 4 (lower is better)
Translates to: THSKVRPLSGRQPQLPSQPCFGR*ACNANT
Trigger: CGTGTTTGCGTTGCACGCCCACCGCCCGAAACACGG...TTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCCCACTTCCGGAGGCTaGGGAAGCCGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQPTSGG*GSRWGW
Trigger: CCAGCCCCAGCGGCTTCCCCAGCCTCCGGAAGTGGG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTAGAGACCTGTGCTCCTaGGGGTTCTGCGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPRDLCS*GFCAGR
Trigger: CCGGCCGGCGCAGAACCCCCAGGAGCACAGGTCTCT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACSVRLL*NQARGW
Trigger: CCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp AGGGCACGAACCGCACACTGCGGGACGCCGGCATCTTaGAATCGCCACTCACTCCTACAGAGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: RARTAHCGTPAS*NRHSLLQSQTA
Trigger: TGCAGTTTGGCTCTGTAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCATGTGCATTCCCTaGGGCGGGGATGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESGMCIP*GGDGWC
Trigger: GCACCACCCATCCCCGCCTCAGGGAATGCACATGCC...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCTGGTCCTGGCTGAGTaGATGGTAGAGGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTLVLAE*MVEDSE
Trigger: CTCAGAGTCCTCTACCATTCACTCAGCCAGGACCAG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTTCCGTCTTTCCCTGTaGGCTTCTGGAACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACFRLSL*ASGTRH
Trigger: GTGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCGCCTCTTCTTTAGGTTaGGCCACAGGGCTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACASSLG*ATGLAG
Trigger: GCCAGCTAGCCCTGTGGCTCAACCTAAAGAAGAGGC...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTTGTTTGTCCTGTGCGTaGCAGTCCTTTTCACGCCAG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVACLSCA*QSFSRQ
Trigger: CTGGCGTGAAAAGGACTGTCACGCACAGGACAAACA...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCCTGAATGGGTCCCACTaGCATCAGCAGGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPLNGSH*HQQALQ
Trigger: CTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAG...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGCTGCCCAGTGGGTACTaGGTGGTTTGGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVLPSGY*VVWISL
Trigger: AAGAGAGATCCAAACCACTCAGTACCCACTGGGCAG...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCTGAACTGTCCCAGCTaGTCACCACCCAGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTLNCPS*SPPSED
Trigger: GTCTTCACTGGGTGGTGATCAGCTGGGACAGTTCAG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTGCCATCACACACGCTaGCCTCCTTGTCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPCHHTR*PPCPVQ
Trigger: TTGCACAGGACAAGGAGGTCAGCGTGTGTGATGGCA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCGAAAGCGGGAAGCCTaGAGTCACCCACAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACRKREA*SHPQRA
Trigger: TGCCCTTTGTGGGTGACTTCAGGCTTCCCGCTTTCG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCACGTCAAGCCATAGCTaGGGCCTACAAGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPTSSHS*GLQVGR
Trigger: CCTCCCTACTTGTAGGCCTCAGCTATGGCTTGACGT...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTGGTGGTGGTGCTGGTaGTGCGGCGGGTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPWWWCW*CGGCCG
Trigger: ACCACAGCACCCGCCGCAGCACCAGCACCACCACCA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCACTGCATCCGGCTaGTGCTGGCCTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESGTASG*CWPEAE
Trigger: CTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCC...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCAGAGCAGCGGCTGCTaGTCATTTCTATCACGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLQSSGC*SFLSRV
Trigger: CACACGTGATAGAAATGAGCAGCAGCCGCTGCTCTG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCACACCAACTCCAGCCTaGTGTGTCCTGTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTTPTPA*CVLSVR
Trigger: CCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGCCTGTCCAGCACATTaGCTTATCTGGGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGACPAH*LIWEVC
Trigger: ACACACTTCCCAGATAAGGCAATGTGCTGGACAGGC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGAGCTTACACAGTCCTTaGAAAACCAGCTTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQSLHSP*KTSFRH
Trigger: GTGGCGGAAGCTGGTTTTGCAAGGACTGTGTAAGCT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCAAGCAATGCTGCCTTaGCCTCTGCTGAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSQAMLP*PLLKAP
Trigger: TGGAGCTTTCAGCAGAGGCCAAGGCAGCATTGCTTG...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTACGGCAGGTCTCGGCTaGCTCGGAACTGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPTAGLG*LGTGSK
Trigger: CTTGCTACCAGTTCCGAGCCAGCCGAGACCTGCCGT...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGGCCTGGGAATCTCTaGGGTCCCACGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESGPGNL*GPTAGL
Trigger: GAGACCTGCCGTGGGACCCCAGAGATTCCCAGGCCC...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAAAATTCTGGAGGGCCTaGGAATCTCTGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPKFWRA*ESLGSH
Trigger: GTGGGACCCCAGAGATTCCCAGGCCCTCCAGAATTT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTACGGGCCGCTCTCTTaGGAACACTGGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITYGPLS*EHWLLS
Trigger: GGACAGCAGCCAGTGTTCCCAAGAGAGCGGCCCGTA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCGGAGCCCCTGGCGCTaGGGGCACTGCATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRRSPWR*GHCIRL
Trigger: CAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGGGGCCGGCCCTGGATaGACGCCACTCGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEGAGPG*TPLEES
Trigger: AGACTCCTCGAGTGGCGTCCATCCAGGGCCGGCCCC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCCAGGCTTTGTGTCCTaGGGCCGGCCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPPGFVS*GRPWMD
Trigger: GTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCCCCACCAAGCCAGCTaGTGGGCCGACGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FYSTINSTHSKVRPLSGRPHQAS*WADVPG
Trigger: ACCAGGCACGTCGGCCCACCAGCTGGCTTGGTGGGG...CCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACAGGCGAGTGTGCGTaGGGCCCCGCTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTGECA*GPAGRC
Trigger: ACATCTGCCAGCGGGGCCCCACGCACACTCGCCTGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGCTGGGCATCCGTGGTaGACGAGGACAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESAGHPW*TRTAPP
Trigger: TGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGC...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLESGP*LAGALE
Trigger: CTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTAAGGATCGCAGGGTCTaGAAGACCTGCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAKDRRV*KTCFSS
Trigger: AGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAATCCTACAAGCGCTGTaGCTTCCTGGGACTGACTGC +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPILQAL*LPGTDC
Trigger: GCAGTCAGTCCCAGGAAGCCACAGCGCTTGTAGGAT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTCTTCCACGAGGGTTTaGCTGGTGTGGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPSSTRV*LVWADF
Trigger: GAAGTCAGCCCACACCAGCCAAACCCTCGTGGAAGA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGGCCGGAACTGTGGCTaGGACATCGGCATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITGRNCG*DIGIKG
Trigger: TCCTTTGATGCCGATGTCTCAGCCACAGTTCCGGCC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGTTCCGTCTTTCCCTGTaGGCTTCTGGAACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGFRLSL*ASGTRH
Trigger: GTGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAA...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTTTTGGGCTGAACGTTTaGAATACTGACATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGFGLNV*NTDILV
Trigger: AACCAGGATGTCAGTATTTCAAACGTTCAGCCCAAA...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGATGGTTGTGGGTATTaGGTGAGGTCGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLDGCGY*VRSDCV
Trigger: AACACAGTCCGACCTCACTCAATACCCACAACCATC...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGGCGTCTGATGGTCTATaGGCACATTCCGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVASDGL*AHSAYL
Trigger: AAGGTAAGCGGAATGTGCTCATAGACCATCAGACGC...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCGTCTGATGGTCTATaGGCACATTCCGCTTACCTT +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAASDGL*AHSAYL
Trigger: AAGGTAAGCGGAATGTGCTCATAGACCATCAGACGC...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGCTGTGCGCGCGTTATTaGAAATGTTACCCACCTAAG +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGLCARY*KCYPPK
Trigger: CTTAGGTGGGTAACATTTTCAATAACGCGCGCACAG...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTGTGCGCGCGTTATTaGAAATGTTACCCACCTAAG +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLCARY*KCYPPK
Trigger: CTTAGGTGGGTAACATTTTCAATAACGCGCGCACAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTGGATCCCACGCCTGTaGAAAGCAAAGCTGGATTAT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGWIPRL*KAKLDY
Trigger: ATAATCCAGCTTTGCTTTTCACAGGCGTGGGATCCA...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAGCGGCTGCAGCGGCTaGGGCTGGAACAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNSGCSG*GWNRLL
Trigger: CAGAAGCCTGTTCCAGCCGCAGCCGCTGCAGCCGCT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTACAGGTCCAGGTGTATaGTGTGGAAATTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVATGPGV*CGNSGG
Trigger: CCCTCCAGAATTTCCACAGCATACACCTGGACCTGT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGTGGTGGTGCTGGTGCTaGGGCGGGTGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSWWCWC*GGCCGG
Trigger: CCCACCACAGCACCCGCCGCAGCACCAGCACCACCA...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTACAGCTGCTGCTGTTaGTGCGCGAGTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITYSCCC*CASLSS
Trigger: GCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGGGGGAGCGTACAGCTaGTGCTGTTGCTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAGGAYS*CCCCAS
Trigger: ACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGCCTGTCCAGCACATTaGCTTATCTGGGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLACPAH*LIWEVC
Trigger: ACACACTTCCCAGATAAGGCAATGTGCTGGACAGGC...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAAAGGCAGGGTGCGGGTaGCTACGGAGGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEKAGCG*LRRLLP
Trigger: AGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTT...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTCCAGCAAGGCAGGGTaGGGGTGCCTACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNSSKAG*GCLRRL
Trigger: CAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGGA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCCTCCGAACCTTTCCTaGCCTGCACACACTCCTATC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACPPNLS*PAHTPI
Trigger: GATAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGCAAACCACGGGCTTATaGACCTCAGAAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGQTTGL*TSEVRH
Trigger: ATGCCTAACTTCTGAGGTGCATAAGCCCGTGGTTTG...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGCACGAACCGCACACTaGGGGACGCCGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPARTAH*GTPASL
Trigger: CAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTGCAGCGGCTGCGGCTaGAACAGGCTTCTGATCGGC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQACSGCG*NRLLIG
Trigger: GCCGATCAGAAGCCTGTTCCAGCCGCAGCCGCTGCA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGTTCTTGGGCTGCTGTaGAGTCACGGGTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPVLGLL*SHGWRG
Trigger: ACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAAC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGATGCTGTGGAAATTCTaGAGGGCCTGGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLMLWKF*RAWESL
Trigger: CAGAGATTCCCAGGCCCTCCAGAATTTCCACAGCAT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGGCTGGTGCGGGGGCTaGTGCGGAGGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSGWCGG*CGGWCC
Trigger: ACAGCACCAGCCTCCGCACCAGCCCCCGCACCAGCC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTTATGCCGGAGCCCCTaGCGCTGGGGGCACTGCATC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQLCRSP*RWGHCI
Trigger: GATGCAGTGCCCCCAGCGCCAGGGGCTCCGGCATAA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTGTTCCTTGGCGCAGTaGGCTGCATTTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACCSLAQ*AAFAAW
Trigger: CCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCGTGTGACGGCGCTATaGGTAATTCACGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSRVTAL*VIHANC
Trigger: GCAATTTGCGTGAATTACCCATAGCGCCGTCACACG...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAATTCGCGGTCCACAGCTaGCCCTTCGCCTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEFAVHS*PFASAG
Trigger: TCCTGCGGAGGCGAAGGGCCAGCTGTGGACCGCGAA...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCCCCACCAAGCCAGCTaGTGGGCCGACGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSPHQAS*WADVPG
Trigger: ACCAGGCACGTCGGCCCACCAGCTGGCTTGGTGGGG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAACTTGCGGGCAGGCTGTaGTCCCACTTCCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWELAGRL*SHFRRL
Trigger: CAGCCTCCGGAAGTGGGACCACAGCCTGCCCGCAAG...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNLESGP*LAGALE
Trigger: CTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGGAGGTCGGACTGTGTTaGACTGTTCTAATCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLEVGLC*TVLISA
Trigger: AGCGCTGATTAGAACAGTCCAACACAGTCCGACCTC...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGATGCGGAGGGGGCAATaGAGGATGCAACGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAMRRGQ*RMQRPL
Trigger: CAGGGGCCGTTGCATCCTCCATTGCCCCCTCCGCAT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
3UTR CAA 72 bp ACCGTCCCTTTGAAGTGCGGGTTGATGTGTATGTTCTaGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TVPLKCGLMCMF*GCCGVTGGGVI
Trigger: GATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACACATCAACCCGCACTTCAAAGGGACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp CAACTTACCCCACCTGACAGCTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCGTCTCCACCACCACTG +
Preference number: 4 (lower is better)
Translates to: QLTPPDSLITLT*ELMWGPSPPPL
Trigger: CAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGTAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCTCTCTAGTTACATCTaGGAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGLSSYI*EPNNCS
Trigger: GGAACAATTATTAGGCTCTCAGATGTAACTAGAGAG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATGCTGGAACAGGCTTCTaGTCGGCTGCTGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNAGTGF*SAAAEA
Trigger: CGCCTCAGCAGCAGCCGATCAGAAGCCTGTTCCAGC...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGCTGGTCCTGGCTGAGTaGATGGTAGAGGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGLVLAE*MVEDSE
Trigger: CTCAGAGTCCTCTACCATTCACTCAGCCAGGACCAG...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGCTGCTGTCCTTGCTaGTTAAATGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGCCPC*LNAGPG
Trigger: GCCAGGACCAGCATTTAATCAGCAAGGACAGCAGCC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGACGCATGTCAACCCATaGAGCAGAAGCCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGTHVNP*SRSRWA
Trigger: TGCCCATCGGCTTCTGCTTCATGGGTTGACATGCGT...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGGCCCGCGAGGGTGGTaGCGCGCTGACGATAGGTTT +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSGPRGW*RADDRF
Trigger: AAACCTATCGTCAGCGCGTCACCACCCTCGCGGGCC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAATGCCTCGTCCGTGCATaGTGGCCTTCTTCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWECLVRA*WPSSPG
Trigger: ACCCGGCGAAGAAGGCCATCATGCACGGACGAGGCA...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTAGCATCTGTAAACTCTaGATGGGTCCCACTGACATC +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVASICKL*MGPTDI
Trigger: GATGTCAGTGGGACCCATTCAGAGTTTACAGATGCT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGATGGCTTTCCGTTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCTCAGCAACGGAAAGCCAT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGATGGTTGTGGGTATTaGGTGAGGTCGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTDGCGY*VRSDCV
Trigger: AACACAGTCCGACCTCACTCAATACCCACAACCATC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACCGACCGGACTGGATaGCCTCCCCTGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTDRTG*PPLISQ
Trigger: CTGGCTTATCAGGGGAGGTCATCCAGTCCGGTCGGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCCCTTCGACAAGCGTCTaGTGGTCTATGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPPSTSV*WSMSTF
Trigger: GAATGTGCTCATAGACCATCAGACGCTTGTCGAAGG...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGGAGATGGGAAGGTCTaGGAGAGTGAGTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPGDGKV*ESESWN
Trigger: ATTCCAAGACTCACTCTCTCAGACCTTCCCATCTCC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGGAGATGGGAAGGTCTaGGAGAGTGAGTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTGDGKV*ESESWN
Trigger: ATTCCAAGACTCACTCTCTCAGACCTTCCCATCTCC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCGCAGTTAACGCGAAGTaGACAAAGGGGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACAVNAK*TKGWNR
Trigger: CCTGTTCCACCCCTTTGTTCACTTCGCGTTAACTGC...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGGTCCAGAATTCGCCCTaGCAACCTCAGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KVRPLSGRQPQLPSQPSLVQNSP*QPQGLG
Trigger: CCCAAGACCCTGAGGTTGTCAGGGCGAATTCTGGAC...CAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGCACCAGCCTGCTGCTaGCGCCGTAACTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPAPACC*RRNSFC
Trigger: ACAGAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGGAGCGTACAGCTGCTaGTGTTGCTGCGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPGAYSC*CCCASL
Trigger: GAGACTCGCGCAGCAACAGCAGCAGCTGTACGCTCC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCATTTTGTCTGACCTGTaGACCTGGAAAGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSILSDL*TWKGQQ
Trigger: CTGTTGCCCTTTCCAGGTGCACAGGTCAGACAAAAT...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGAGGGCCATGCCGTGTaGCTGTCCAGCACATTGCCT +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPEGHAV*LSSTLP
Trigger: AGGCAATGTGCTGGACAGGCACACGGCATGGCCCTC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTTCCTGGGACTGACTaGTGCAACAGCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPLPGTD*CNSPCS
Trigger: GCTGCAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGAACCTTTCCTGCCCTaGACACACTCCTATCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTEPFLP*THSYQS
Trigger: TGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGACCAGAGCCACCCGGTaGAGCCCGCAGAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQTRATR*SPQSVH
Trigger: GTGTACACTCTGCGGGCTGCACCGGGTGGCTCTGGT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCCCTGAGGCGGGGATaGGTGGTGCGGGTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSSLRRG*VVRVLH
Trigger: GTGCAGCACCCGCACCACCCATCCCCGCCTCAGGGA...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGAAATTCTGGAGGGCCTaGGAATCTCTGGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITKFWRA*ESLGSH
Trigger: GTGGGACCCCAGAGATTCCCAGGCCCTCCAGAATTT...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTTTGCTGATTAAATGCTaGTCCTGGCTGAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCLLIKC*SWLSEW
Trigger: CCATTCACTCAGCCAGGACCAGCATTTAATCAGCAA...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATACGGGCCGCTCTCTTaGGAACACTGGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESYGPLS*EHWLLS
Trigger: GGACAGCAGCCAGTGTTCCCAAGAGAGCGGCCCGTA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAACAGAAACGGCTGTCCTaGGCCTGGCAGGAACGGCTG +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEQKRLS*AWQERL
Trigger: CAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTG...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGGCGGGACGGACAGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRGGTDR*WWWWWC
Trigger: GCACCACCACCACCACCACCACCTGTCCGTCCCGCC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGTGAGGCCGGAACTGTaGCTGAGACATCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITVRPEL*LRHRHQ
Trigger: TTGATGCCGATGTCTCAGCCACAGTTCCGGCCTCAC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCAAATTGCTGTTCCTTaGCGCAGTGGGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTQIAVP*RSGLHL
Trigger: CAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCGTGTGACGGCGCTATaGGTAATTCACGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTRVTAL*VIHANC
Trigger: GCAATTTGCGTGAATTACCCATAGCGCCGTCACACG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGTGGGTTACCGTTGGTaGGTGATGGTGACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITVGYRW*VMVTVP
Trigger: AGGCACTGTCACCATCACCCACCAACGGTAACCCAC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCCTGGGGCCGGCCCTaGATGGACGCCACTCGAGGA +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSSWGRP*MDATRG
Trigger: TCCTCGAGTGGCGTCCATCCAGGGCCGGCCCCAGGA...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGTTCTGCTTGTTTaGCATCAGGCGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNQVLLV*HQAPPA
Trigger: GGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAGCAGGCTCTTCAGCTaGGCATCCGTGGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESSRLFS*ASVVDE
Trigger: CTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTAGAGACCTGTGCTCCTaGGGGTTCTGCGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSRDLCS*GFCAGR
Trigger: CCGGCCGGCGCAGAACCCCCAGGAGCACAGGTCTCT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPRPVAG*RSGEQL
Trigger: TAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSVRLL*NQARGW
Trigger: CCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGAGGTCGGACTGTGTTaGACTGTTCTAATCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTEVGLC*TVLISA
Trigger: AGCGCTGATTAGAACAGTCCAACACAGTCCGACCTC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAAACAAAGAAGCGGGTaGTTAAGGGCACGAACCGCA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTKQRSG*LRARTA
Trigger: TGCGGTTCGTGCCCTTAACCACCCGCTTCTTTGTTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp TCCCTGGAGGTTCACTCAGGATGCATTACCTGCAGGTaGGGCTGTGTGTGTGTGGGCAGAAACGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLEVHSGCITCR*GCVCVGRNGCP
Trigger: AGGACAGCCGTTTCTGCCCACACACACACAGCCCAACCTGCAGGTAATGCATCCTGAGTGAACCTCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGAATGCTGGTCCTGGCTaGGTGAATGGTAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITNAGPG*VNGRGL
Trigger: GAGTCCTCTACCATTCACTCAGCCAGGACCAGCATT...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGCGCTTGCTTACATTCTaGGAAGTTGTATTATGCCGG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVRLLTF*EVVLCR
Trigger: CCGGCATAATACAACTTCTCAGAATGTAAGCAAGCG...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCATGGCTTTCCGTTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCTCAGCAACGGAAAGCCAT...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATGCCATGGGAACCTGCTaGTGGGCACACAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNAMGTC*WAHRPA
Trigger: AGCAGGTCTGTGTGCCCATCAGCAGGTTCCCATGGC...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGATCCCATTACTAAATaGACAGTAGCAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQDPITK*TVARSR
Trigger: CCTGCTTCTTGCTACTGTTCATTTAGTAATGGGATC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTGGAGTTCTCAAGGCTaGGGCGGAGCAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQWSSQG*GGAEWQ
Trigger: CTGCCACTCTGCTCCGCCTCAGCCTTGAGAACTCCA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGTAAACACAGTGTaGAAATCGTCAGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPVVNTV*KSSAPS
Trigger: GGAAGGTGCTGACGATTTTCACACTGTGTTTACCAC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGTGGTAAACACAGTGTaGAAATCGTCAGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTVVNTV*KSSAPS
Trigger: GGAAGGTGCTGACGATTTTCACACTGTGTTTACCAC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAACCGTCCCTTTGAAGTaGGGGTTGATGTGTATGTTC +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPTVPLK*GLMCMF
Trigger: GAACATACACATCAACCCGCACTTCAAAGGGACGGT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTACTGCATCCGGCTGCTaGTGGCCTGAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSTASGC*WPEAER
Trigger: CCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCGCTGCATGGGCCGCTTaGTTACATTCTGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACAAWAA*LHSEKL
Trigger: CAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGC...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTACAGCTGCTGCTGTTaGTGCGCGAGTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAYSCCC*CASLSS
Trigger: GCTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGATGGTGACAGTGCCTaGTCTTCCTGCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPDGDSA*SSCSAG
Trigger: CCCAGCAGAGCAGGAAGAGCAGGCACTGTCACCATC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGACAAGAAGCAGAATCTaGTGTTCAACTGGCACCACT +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVTRSRI*CSTGTT
Trigger: AGTGGTGCCAGTTGAACAGCAGATTCTGCTTCTTGT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGGCCATCACAGACCCTaGTCTAGCCGAGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSGHHRP*SSRGPC
Trigger: GCATGGCCCTCGGCTAGAGCAGGGTCTGTGATGGCC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATATGGGCACACAGACCTaGTCCCTGGACAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNMGTQT*SLDSLL
Trigger: CAGGAGGCTGTCCAGGGAGCAGGTCTGTGTGCCCAT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGACCTCCTTGTCCTGTaGAATTACATGACTAGGACC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTDLLVL*NYMTRT
Trigger: GGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGTGGTGGTAGTCGGGTaGCTCCGAACCTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEVVVVG*LRTFPA
Trigger: GGCAGGAAAGGTTCGGAGGCACCCGACTACCACCAC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGACAATAGTACCTGTCTaGCTATCCACTCTATGGAAC +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQTIVPV*LSTLWN
Trigger: GTTCCATAGAGTGGATAGGCAGACAGGTACTATTGT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAAAAGGTCACACTCTGTaGTTTGCTGCTGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPKGHTL*FAAVVP
Trigger: AGGTACCACAGCAGCAAAGCACAGAGTGTGACCTTT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGGGAGTCGTGGGGGCTaGCTGAAACTGTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPGSRGG*LKLLGT
Trigger: TGTTCCCAACAGTTTCAGCCAGCCCCCACGACTCCC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGGTAGGAGGCGGTGGTaGTGGAGGGGGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSGRRRW*WRGTSL
Trigger: CAGCGAAGTCCCCCTCCACCACCACCGCCTCCTACC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTACAGTGGGTTACCGTTaGTGGGTGATGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPTVGYR*WVMVTV
Trigger: CACTGTCACCATCACCCACCAACGGTAACCCACTGT...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTCTGACCTGTGCACCTaGAAAGGGCAACAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPSDLCT*KGQQWV
Trigger: AACCCACTGTTGCCCTTTCCAGGTGCACAGGTCAGA...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTCATGTTGGCACTGGATaGTACAAAATTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: ELLEPATAREGGDALTIGHVGTG*YKIGCF
Trigger: AAAACATCCAATTTTGTACCATCCAGTGCCAACATG...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAGCAGGCTCTTCAGCTaGGCATCCGTGGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNSRLFS*ASVVDE
Trigger: CTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQRPVAG*RSGEQL
Trigger: TAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAGGCCCGTGGCTGGCTaGCGCTCTGGAGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNRPVAG*RSGEQL
Trigger: TAACTGTTCTCCAGAGCGCCAGCCAGCCACGGGCCT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNNQARG*LALWRT
Trigger: TGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGTTGGCTGGGACACTCTaGAGCAGAGGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSLAGTL*SRGGGS
Trigger: GCTGCCGCCACCTCTGCTCCAGAGTGTCCCAGCCAA...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTACTCCAACGCAGCTGTaGACTGAGCCAAATAAACTA +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVATPTQL*TEPNKL
Trigger: TAGTTTATTTGGCTCAGTCCACAGCTGCGTTGGAGT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACCACGAGGGTTTGGCTaGTGTGGGCTGACTTCACGT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESPRGFG*CGLTSR
Trigger: ACGTGAAGTCAGCCCACACCAGCCAAACCCTCGTGG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACTCCACCGACCGGACTaGATGACCTCCCCTGATAAG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLHRPD*MTSPDK
Trigger: CTTATCAGGGGAGGTCATCCAGTCCGGTCGGTGGAG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp TCCTGGAGAGGGAGTCGTGGGGGCTGGCTGAAACTGTaGGGAACAGGTCCAGGTGTATGCTGTGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: SWRGSRGGWLKL*GTGPGVCCGNS
Trigger: AGAATTTCCACAGCATACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGGCCGGAACTGTGGCTaGGACATCGGCATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEGRNCG*DIGIKG
Trigger: TCCTTTGATGCCGATGTCTCAGCCACAGTTCCGGCC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGAGGTTTCACTTGTGCTaGGGGCGTGGCAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSRFHLC*GRGRAA
Trigger: CGCTGCTCTGCCACGCCCTCAGCACAAGTGAAACCT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTTTGGGCTGAACGTTTaGAATACTGACATCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLFGLNV*NTDILV
Trigger: AACCAGGATGTCAGTATTTCAAACGTTCAGCCCAAA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGTTGGATGTTTTGGGCTaGACGTTTGAAATACTGACA +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGLDVLG*TFEILT
Trigger: TGTCAGTATTTCAAACGTTCAGCCCAAAACATCCAA...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGTGCCTCGTCCGTGCATaGTGGCCTTCTTCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRCLVRA*WPSSPG
Trigger: ACCCGGCGAAGAAGGCCATCATGCACGGACGAGGCA...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGAATGGGTCCCACTaGCATCAGCAGGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPLNGSH*HQQALQ
Trigger: CTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGCTGAATGGGTCCCACTaGCATCAGCAGGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQALNGSH*HQQALQ
Trigger: CTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAG...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCATGGCTTTCCGTTGCTaGGGAAGCATCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACMAFRC*GSICKL
Trigger: GAGTTTACAGATGCTTCCTCAGCAACGGAAAGCCAT...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAAAAACAGAGGTGACTaGAGCAGTGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTKNRGD*SSGHQI
Trigger: AATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACTGTGGAAACGAGATaGCGCAAGTCTGTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTVETR*RKSVPV
Trigger: GACGGGCACAGACTTGCGTCATCTCGTTTCCACAGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGAAATGAGTGGGCAGTaGCAGCCATGGGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESEMSGQ*QPWEPA
Trigger: AGCAGGTTCCCATGGCTGTCACTGCCCACTCATTTC...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGGAATAAATCGTGAGTaGAGACCTGTCGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTGINRE*RPVEAK
Trigger: CTTTGCTTCGACAGGTCTTCACTCACGATTTATTCC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAGGAATAAATCGTGAGTaGAGACCTGTCGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPGINRE*RPVEAK
Trigger: CTTTGCTTCGACAGGTCTTCACTCACGATTTATTCC...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGGACGCCGGCATCTTTaGATCGCCACTCACTCCTAC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQGRRHL*IATHSY
Trigger: GTAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCCTGCCCCTCTCGGTaGTCTCTCTCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSSCPSR*SLSSGP
Trigger: GGGACCAGAGGAGAGAGAGCACCGAGAGGGGCAGGA...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTACACCAACTCCAGCCTaGTGTGTCCTGTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPTPTPA*CVLSVR
Trigger: CCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGTGGCTTTCCAGGGTATaGAAAGGTCAATCAACAATC +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVWLSRV*KGQSTI
Trigger: GATTGTTGATTGACCTTTGCATACCCTGGAAAGCCA...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACAGCCCCTGCAGCGTaGAGTGTTACTCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATAPAA*SVTLKH
Trigger: GTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTAACAAAGATAATGGTTaGAGCAGATCTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVANKDNG*SRSSTR
Trigger: CCTCGTGGAAGATCTGCTGCAACCATTATCTTTGTT...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGGTGCCTACGGAGGCTaGTGCCTGTCCACAAAACAG +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEGAYGG*CLSTKQ
Trigger: CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACCCACAAAGGGCACTaGAGACACCGCACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATHKGH*RHRTRN
Trigger: ATTCCTGGTGCGGTGTCTGCAGTGCCCTTTGTGGGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GGGTCTTGGGAAGGGTCAACCTGGCCCCATAGCTACCATCCCCATGCCACCTTTGTCAACTCAGCTTCGTaGCCTTCATACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSWEGSTWPHSYHPHATFVNSAS*PSYCPS
Trigger: AGAAGGACAGTATGAAGGCCACGAAGCTGAGTTGAC...AAAGGTGGCATGGGGATGGTAGCTATGGGGCCAGGTTGACCCTTCCCAAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAAGCAGCGCAGGTCTGTaGTCCTTCATCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESSSAGL*SFILPL
Trigger: GAGGGGCAGGATGAAGGACCACAGACCTGCGCTGCT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTCTTGATACTGCATGTTaGCACTGGATGGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCLDTAC*HWMVQN
Trigger: ATTTTGTACCATCCAGTGCCAACATGCAGTATCAAG...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGATGCTTTTGATCCCTaGAGGGACAGGCGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPDAFDP*RDRRVC
Trigger: GCACACTCGCCTGTCCCTCCAGGGATCAAAAGCATC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGGCTGGCTGGCGCTCTaGAGAACAGTTACGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSGWLAL*RTVTQD
Trigger: GTCCTGCGTAACTGTTCTCCAGAGCGCCAGCCAGCC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGTCAGTTCGGCTCCTCTaGAATCAGGCCCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSSVRLL*NQARGW
Trigger: CCAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGA...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCCACCTCATGTGTGGTaGGAACTAGGCCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQPPHVW*ELGQRA
Trigger: AGCCCTCTGGCCTAGTTCCCACCACACATGAGGTGG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACTTCCGAGGGTTGGCTaGGACACTCTGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESLPRVG*DTLEQR
Trigger: CCTCTGCTCCAGAGTGTCCCAGCCAACCCTCGGAAG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCACTCCAACGCAGCTGTaGACTGAGCCAAATAAACTA +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTTPTQL*TEPNKL
Trigger: TAGTTTATTTGGCTCAGTCCACAGCTGCGTTGGAGT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCCAGTGGGTACTGAGTaGTTTGGATCTCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLPVGTE*FGSLLI
Trigger: AATTAAGAGAGATCCAAACCACTCAGTACCCACTGG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGAGCAGAAGGTATACCTaGGGATCCAATATGAATCAG +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLSRRYT*GSNMNQ
Trigger: CTGATTCATATTGGATCCCCAGGTATACCTTCTGCT...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGGAGAGCCCAGAGCATaGCATGGTGAGGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEGEPRA*HGEVIP
Trigger: TGGGATCACCTCACCATGCCATGCTCTGGGCTCTCC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGCCGCCACCTCCAAGTaGAGTGAGCCACGCTACCAC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSAATSK*SEPRYH
Trigger: GTGGTAGCGTGGCTCACTCCACTTGGAGGTGGCGGC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ACCATCCCCATGCCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGATGGGAAGGGTCAACCTaGCCCCATAGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: TIPMPPFQDQPGTTACTRWEGST*PHSYHP
Trigger: GGGATGGTAGCTATGGGGCCAGGTTGACCCTTCCCA...TCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGGCATGGGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392759.7
3UTR CAA 72 bp ATCACGTGTGACGGCGCTATGGGTAATTCACGCAAATaGCTGTTCCTTGGCGCAGTGGGCTGCATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITCDGAMGNSRK*LFLGAVGCICC
Trigger: GCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGTGAATTACCCATAGCGCCGTCACACGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTCTTCTGGGTACTCTTaGGTATACAATTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSSSGYS*VYNSDP
Trigger: TGGATCAGAATTGTATACTCAAGAGTACCCAGAAGA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGCATCTAAAGGTTCATTaGTCTCGATGTCTAACACTT +
Preference number: 4 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGHLKVH*SRCLTL
Trigger: AAGTGTTAGACATCGAGATCAATGAACCTTTAGATG...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGGCTGCTGTCCTTGCTaGTTAAATGCTGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEGCCPC*LNAGPG
Trigger: GCCAGGACCAGCATTTAATCAGCAAGGACAGCAGCC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGCCTTCTTCGCCGGGTaGATTCCTTGGATGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAAFFAG*IPWMLL
Trigger: CAAAAGCATCCAAGGAATTCACCCGGCGAAGAAGGC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAAACGGCAGGCCAGAGTaGACATCCGCTGATGAACAG +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWENGRPE*TSADEQ
Trigger: CTGTTCATCAGCGGATGTTCACTCTGGCCTGCCGTT...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGACTGTGGAAACGAGATaGCGCAAGTCTGTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQTVETR*RKSVPV
Trigger: GACGGGCACAGACTTGCGTCATCTCGTTTCCACAGT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGCCATGGGAACCTGCTaGTGGGCACACAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRAMGTC*WAHRPA
Trigger: AGCAGGTCTGTGTGCCCATCAGCAGGTTCCCATGGC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGTTGTGGGTATTGAGTaGGGTCGGACTGTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPVVGIE*GRTVLD
Trigger: GTCCAACACAGTCCGACCTCACTCAATACCCACAAC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTCTGATCACCACCCAGTaGAGACGTTCCCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSLITTQ*RRSPPP
Trigger: TGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAG...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCTGAACTGTCCCAGCTaGTCACCACCCAGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQLNCPS*SPPSED
Trigger: GTCTTCACTGGGTGGTGATCAGCTGGGACAGTTCAG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAATGCCATCACACACGCTaGCCTCCTTGTCCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWECHHTR*PPCPVQ
Trigger: TTGCACAGGACAAGGAGGTCAGCGTGTGTGATGGCA...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTGTATGTTCTTGGGCTaGTGTGGAGTCACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQCMFLG*CGVTGG
Trigger: GCCACCCGTGACTCCACAGCAGCCCAAGAACATACA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTACCGTCCCTTTGAAGTaGGGGTTGATGTGTATGTTC +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPTVPLK*GLMCMF
Trigger: GAACATACACATCAACCCGCACTTCAAAGGGACGGT...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGTGGGCTGCATTTGCTaGATGGGCCGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQVGCIC*MGRLLT
Trigger: TGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCAC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGGTAATTCACGCAAATTaGTGTTCCTTGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITVIHAN*CSLAQW
Trigger: CCACTGCGCCAAGGAACAGCAATTTGCGTGAATTAC...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATGGCAGAGCAGCGGCTaGTGCTCATTTCTATCACGT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESWQSSG*CSFLSR
Trigger: ACGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCTCTGTTTCTGTTTTTaGCTCTTCTTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLLCFCF*LFFRLS
Trigger: GCTCAACCTAAAGAAGAGGCAAAAACAGAAACAGAG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAATGGCTCCTCCACATCTaGAGGTTTGATCGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEWLLHI*RFDREH
Trigger: GTGCTCCCGATCAAACCTGCAGATGTGGAGGAGCCA...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGACTAGGCCAGAGGGCTaGCAGGTGAGGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRTRPEG*QVRPSQ
Trigger: CTGTGATGGCCTCACCTGGCAGCCCTCTGGCCTAGT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTTGCCCTATCATTATTTaGTCAAATAGCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVACPIII*SNSSGP
Trigger: TGGACCTGAGCTATTTGAGCAAATAATGATAGGGCA...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTGCTGCAACAGCCCCTaGAGCGTGCAGTGTTACTCT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNCCNSP*SVQCYS
Trigger: AGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTTCTATGAGAAAGTCTaGCTATGTGCACGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPFYEKV*LCARVD
Trigger: GTCTACACGTGCACATAGGCAGACTTTCTCATAGAA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGCTTTAAGGCGGGCCTaGATGACTTTGCCAATCACC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPALRRA*MTLPIT
Trigger: GGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGGCTTCAACAACTGTTTaGCTGAGACCTTTACAAATC +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVASTTV*LRPLQI
Trigger: GATTTGTAAAGGTCTCAGGCAAACAGTTGTTGAAGC...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGAGCAGCTGTAGGCCAGCCACACAGTCTTCCTaGTCTTGCAGCCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TFSRPARNHSMYKSSCRPATQSS*SCSPCC
Trigger: GCAACAAGGGCTGCAAGAGCAGGAAGACTGTGTGGC...TGGCCTACAGCTGCTCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR GCA 90 bp ACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGAGCAGCTGTAGGCCAACCTCCCTCTTCAGTTaGAGGAGCAACCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TFSRPARNHSMYKSSCRPTSLFS*RSNLGI
Trigger: GATGCCCAGGTTGCTCCTGCAACTGAAGAGGGAGGT...TGGCCTACAGCTGCTCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCTGCGGCGGGTGCTGTaGTGGGTGCTGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPLRRVL*WVLGWG
Trigger: CCCCCACCCCAGCACCCACCACAGCACCCGCCGCAG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AAGAATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTTCGCGGTCCACAGCTaGCCCTTCGCCTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KNEFYSTINSTHSKVRPLFAVHS*PFASAG
Trigger: TCCTGCGGAGGCGAAGGGCCAGCTGTGGACCGCGAA...GAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAATCTGCTGTTCAACTaGCACCACTCCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESNLLFN*HHSQPP
Trigger: GGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGATT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACAGGGCAGCCCTGCTaGAACAGCCTTCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATGQPC*NSLQKN
Trigger: GTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAAGGATCGCAGGGTCTaGAAGACCTGCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESKDRRV*KTCFSS
Trigger: AGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCTTCCGAGGGTTGGCTaGGACACTCTGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRLPRVG*DTLEQR
Trigger: CCTCTGCTCCAGAGTGTCCCAGCCAACCCTCGGAAG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCATTTTCGATGGTTGTaGGTATTGAGTGAGGTCGGA +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACHFRWL*VLSEVG
Trigger: TCCGACCTCACTCAATACCCACAACCATCGAAAATG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGAGAATCCATTTTCGATaGTTGTGGGTATTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVRIHFR*LWVLSE
Trigger: CTCACTCAATACCCACAACCATCGAAAATGGATTCT...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTAAACCTTCATTACTaGGATTGTCTGGTACTAAGA +
Preference number: 4 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLNLHY*DCLVLR
Trigger: TCTTAGTACCAGACAATCCCAGTAATGAAGGTTTAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCTCCACCGACCGGACTaGATGACCTCCCCTGATAAG +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSLHRPD*MTSPDK
Trigger: CTTATCAGGGGAGGTCATCCAGTCCGGTCGGTGGAG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp ACGCAAATTGCTGTTCCTTGGCGCAGTGGGCTGCATTaGCTGCATGGGCCGCTTGCTTACATTCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TQIAVPWRSGLH*LHGPLAYILRS
Trigger: ACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp CTAGCCGAGGGCCATGCCGTGTGCCTGTCCAGCACATaGCCTTATCTGGGAAGTGTGTTAAAAATGAATGGG +
Preference number: 4 (lower is better)
Translates to: LAEGHAVCLSST*PYLGSVLKMNG
Trigger: CCCATTCATTTTTAACACACTTCCCAGATAAGGCAATGTGCTGGACAGGCACACGGCATGGCCCTCGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTGACAAATCCGACTaGTTCTTTTTGCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: HSKVRPLSGRQPQLPSQPSDKSD*FFLPDS
Trigger: GCTATCTGGCAAAAAGAATCAGTCGGATTTGTCAGA...AGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCCTTTCCTTTCAGTTTTaGAACGTAATCGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSLSFQF*NVIVQI
Trigger: AATCTGGACGATTACGTTTCAAAACTGAAAGGAAAG...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGCGCTTGCTTACATTCTaGGAAGTTGTATTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGRLLTF*EVVLCR
Trigger: CCGGCATAATACAACTTCTCAGAATGTAAGCAAGCG...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTTCATCTGTTGTCCTTaGTACTGCATGTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITFICCP*YCMLAL
Trigger: CAGTGCCAACATGCAGTATCAAGGACAACAGATGAA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTCAGAAAAACAGAGGTaGCTGAAGCAGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQASEKQR*LKQWPP
Trigger: TGGTGGCCACTGCTTCAGTCACCTCTGTTTTTCTGA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCTGCCCAGTGGGTACTaGGTGGTTTGGATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNLPSGY*VVWISL
Trigger: AAGAGAGATCCAAACCACTCAGTACCCACTGGGCAG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATCCTGTGCAATTACATaGCTAGGACCTGCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESSCAIT*LGPAFD
Trigger: GTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTCGAAAGCGGGAAGCCTaGAGTCACCCACAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSRKREA*SHPQRA
Trigger: TGCCCTTTGTGGGTGACTTCAGGCTTCCCGCTTTCG...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGCAGGTTACAATGTGTaGGGCAAACGGCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPAGYNV*GKRPFP
Trigger: TGGAAAAGGCCGTTTGCCTCACACATTGTAACCTGC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCTGCTGCTGTGGTACCTaGAAATTAAACAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTCCCGT*KLNSGI
Trigger: AATTCCACTGTTTAATTTTCAGGTACCACAGCAGCA...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCTGCTGCTGTGGTACCTaGAAATTAAACAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPCCCGT*KLNSGI
Trigger: AATTCCACTGTTTAATTTTCAGGTACCACAGCAGCA...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGAAGGTCTGAGAGAGTaGGTCTTGGAATGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQEGLRE*VLEWDR
Trigger: CCTGTCCCATTCCAAGACTCACTCTCTCAGACCTTC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGGACGCCGGCATCTTTaGATCGCCACTCACTCCTAC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSGRRHL*IATHSY
Trigger: GTAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGCAGTTAACGCGAAGTaGACAAAGGGGTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQAVNAK*TKGWNR
Trigger: CCTGTTCCACCCCTTTGTTCACTTCGCGTTAACTGC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGCTGGTGGGCCGACGTaGCTGGTCCGGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNAGGPT*LVRARV
Trigger: TACCCGGGCCCGGACCAGGCACGTCGGCCCACCAGC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAAGACTCTTCTAACCTaGACTGAAGATAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTKTLLT*TEDKCN
Trigger: GTTGCACTTATCTTCAGTGCAGGTTAGAAGAGTCTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGACAGCCCCTGCAGCGTaGAGTGTTACTCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSTAPAA*SVTLKH
Trigger: GTGCTTGAGAGTAACACTGCACGCTGCAGGGGCTGT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCATGCTGCAACAGCCCCTaGAGCGTGCAGTGTTACTCT +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESCCNSP*SVQCYS
Trigger: AGAGTAACACTGCACGCTGCAGGGGCTGTTGCAGCA...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGCTTTAAGGCGGGCCTaGATGACTTTGCCAATCACC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQALRRA*MTLPIT
Trigger: GGTGATTGGCAAAGTCATGCAGGCCCGCCTTAAAGC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGGTGCCTACGGAGGCTaGTGCCTGTCCACAAAACAG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRGAYGG*CLSTKQ
Trigger: CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGCTTCAACAACTGTTTaGCTGAGACCTTTACAAATC +
Preference number: 4 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPASTTV*LRPLQI
Trigger: GATTTGTAAAGGTCTCAGGCAAACAGTTGTTGAAGC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTAGCTTACACAGTCCTTaGAAAACCAGCTTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSLHSP*KTSFRH
Trigger: GTGGCGGAAGCTGGTTTTGCAAGGACTGTGTAAGCT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGGTAGGAGGCGGTGGTaGTGGAGGGGGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPGRRRW*WRGTSL
Trigger: CAGCGAAGTCCCCCTCCACCACCACCGCCTCCTACC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGTTGCCGACCCAGGCTaGCTAAAGTGCAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSVADPG*LKCRIP
Trigger: GGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAAC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTGAGGGAAAAAGCAGGTaGCGAGAAGATGTGCATTTA +
Preference number: 4 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPEGKSR*REDVHL
Trigger: TAAATGCACATCTTCTCGCCACCTGCTTTTTCCCTC...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGGCGGGACGGACAGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIGGTDR*WWWWWC
Trigger: GCACCACCACCACCACCACCACCTGTCCGTCCCGCC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCGGAGCCCCTGGCGCTaGGGGCACTGCATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLRSPWR*GHCIRL
Trigger: CAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTTTGAGGAACTGTTCTaGTCTGTCTCAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSFEELF*SVSNVS
Trigger: TGAAACATTTGAGACAGACCAGAACAGTTCCTCAAA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCACCAAGCCAGCTGGTaGGCCGACGTGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPHQASW*ADVPGP
Trigger: CGGACCAGGCACGTCGGCCCACCAGCTGGCTTGGTG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTCCAGGCTTATCAAACTaGTCAAAGTCATCATCTCCG +
Preference number: 4 (lower is better)
Translates to: RPLSGRQPQLPSQPSLPTPGLSN*SKSSSP
Trigger: CGGAGATGATGACTTTGACCAGTTTGATAAGCCTGG...AGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATACCCCACTCACACCCTaGCTTTCCAGGGTATGCAAA +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNTPLTP*LSRVCK
Trigger: TTTGCATACCCTGGAAAGCCAGGGTGTGAGTGGGGT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAATCTGCTGTTCAACTaGCACCACTCCCAACCACCC +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNNLLFN*HHSQPP
Trigger: GGGTGGTTGGGAGTGGTGCCAGTTGAACAGCAGATT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTCCATCTTCCGAGGGTTaGCTGGGACACTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSPSSEG*LGHSGA
Trigger: TGCTCCAGAGTGTCCCAGCCAACCCTCGGAAGATGG...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAAGAATCCATTTTCGATaGTTGTGGGTATTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPRIHFR*LWVLSE
Trigger: CTCACTCAATACCCACAACCATCGAAAATGGATTCT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTAGGCCTCTCCTCACCTaGGTCTGTCCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSRPLLT*VCPSLP
Trigger: AGGAAGGGATGGACAGACCCAGGTGAGGAGAGGCCT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTGTTGCAGGAGCAACCTaGGCATCAGTAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: GHSPDGSRNYLVNLLCLLVAGAT*ASVISS
Trigger: AGATGAGATTACTGATGCCCAGGTTGCTCCTGCAAC...AAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR TCA 90 bp TCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTCTGACAAATCCGACTaGTTCTTTTTGCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: SKVRPLSGRQPQLPSQPSSDKSD*FFLPDS
Trigger: GCTATCTGGCAAAAAGAATCAGTCGGATTTGTCAGA...AGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAAAAGGGTCTCGATCCTaGGGCGGGGGTGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIKGSRS*GGGGAL
Trigger: GAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTT...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAATGGTAGAGGACTCTaGGTAGGAACAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESNGRGL*VGTGWL
Trigger: TAGCCATCCTGTTCCTACTCAGAGTCCTCTACCATT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACTGTGGAATTTCTGCTaGAATGCTAATGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLWNFC*NANAWA
Trigger: AGCCCACGCATTAGCATTTCAGCAGAAATTCCACAG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGTTGTGGGTATTGAGTaGGGTCGGACTGTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSVVGIE*GRTVLD
Trigger: GTCCAACACAGTCCGACCTCACTCAATACCCACAAC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAACCTTCGACAAGCGTCTaGTGGTCTATGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEPSTSV*WSMSTF
Trigger: GAATGTGCTCATAGACCATCAGACGCTTGTCGAAGG...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATGCAGGTTACAATGTGTaGGGCAAACGGCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNAGYNV*GKRPFP
Trigger: TGGAAAAGGCCGTTTGCCTCACACATTGTAACCTGC...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCATTTCCTACCAAAACATaGCACAGAAAAGAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPFPTKT*HRKERV
Trigger: AACTCTCTCTTTTCTGTGTCATGTTTTGGTAGGAAA...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGAAGGTCTGAGAGAGTaGGTCTTGGAATGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSEGLRE*VLEWDR
Trigger: CCTGTCCCATTCCAAGACTCACTCTCTCAGACCTTC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTCACCTCCAAGTGGAGTaGGCCACGCTACCACTAACA +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSHLQVE*ATLPLT
Trigger: TGTTAGTGGTAGCGTGGCTCACTCCACTTGGAGGTG...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTGTTCCAGAAAAAGATaGCTCGGGAATCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITCSRKR*LGNLGS
Trigger: TGAACCAAGATTCCCGAGCCATCTTTTTCTGGAACA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGATGCTTTTGATCCCTaGAGGGACAGGCGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSDAFDP*RDRRVC
Trigger: GCACACTCGCCTGTCCCTCCAGGGATCAAAAGCATC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCTGGAATCAGGCCCGTaGCTGGCTGGCGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPLESGP*LAGALE
Trigger: CTCCAGAGCGCCAGCCAGCCACGGGCCTGATTCCAG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCAGACTCGTCTCATTTaGGGCTGGAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSQTRLI*GWKKAT
Trigger: GGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCACTACAGTAGCTTTATaGAGAATATGTCTCACCTAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTTTVAL*RICLTY
Trigger: GTAGGTGAGACATATTCTCCATAAAGCTACTGTAGT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCATAAAACGTCAACTGTaGAAACGAGATGACGCAAGT +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACIKRQL*KRDDAS
Trigger: ACTTGCGTCATCTCGTTTCCACAGTTGACGTTTTAT...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGAACTGTGGAAATGAGTaGGCAGTGACAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQNCGNE*AVTAMG
Trigger: TCCCATGGCTGTCACTGCCCACTCATTTCCACAGTT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCACAACCTCAGGGTCTTaGGAAGGGTCAACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NEFYSTINSTHSKVRPLSTTSGS*EGSTWP
Trigger: GGGCCAGGTTGACCCTTCCCAAGACCCTGAGGTTGT...GGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
3UTR CAA 72 bp CGCATACAGCTAGAACGCATACAGCTTACACAGTCCTaGCAAAACCAGCTTCCGCCACGGGTGCCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: RIQLERIQLTQS*QNQLPPRVPLK
Trigger: TTTTAAGGGCACCCGTGGCGGAAGCTGGTTTTGCAAGGACTGTGTAAGCTGTATGCGTTCTAGCTGTATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTGTCAGAGAGTTCAAATaGTGTAACCATGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: GHSPDGSRNYLVNLLCLLVREFK*CNHARC
Trigger: ACATCTGGCATGGTTACATCATTTGAACTCTCTGAC...AAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp AAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCTCTTCTGGGTACTCTTaGGTATACAATTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: KSGHSPDGSRNYLVNLLCSSGYS*VYNSDP
Trigger: TGGATCAGAATTGTATACTCAAGAGTACCCAGAAGA...GCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp ACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACTCTCTAGTTACATCTaGGAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: THSKVRPLSGRQPQLPSQLSSYI*EPNNCS
Trigger: GGAACAATTATTAGGCTCTCAGATGTAACTAGAGAG...TTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGTCGTGGGGGCTGGCTaGAACTGTTGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPVVGAG*NCWEQV
Trigger: GACCTGTTCCCAACAGTTTCAGCCAGCCCCCACGAC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTAATGCTGGTCCTGGCTaGGTGAATGGTAGAGGACTC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSNAGPG*VNGRGL
Trigger: GAGTCCTCTACCATTCACTCAGCCAGGACCAGCATT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCTGTGGAATTTCTGCTaGAATGCTAATGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNLWNFC*NANAWA
Trigger: AGCCCACGCATTAGCATTTCAGCAGAAATTCCACAG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCTCCTGCAGGCATGGTaGGGCAGGGCTGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPLLQAW*GRADWQ
Trigger: TTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTGGGCTGACTTCACGTaGGCAGCATACCAAACACCT +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSWADFT*AAYQTP
Trigger: AGGTGTTTGGTATGCTGCTCACGTGAAGTCAGCCCA...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGTGGGCTGACTTCACGTaGGCAGCATACCAAACACCT +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRWADFT*AAYQTP
Trigger: AGGTGTTTGGTATGCTGCTCACGTGAAGTCAGCCCA...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAACCTGGGGATCCAATATaGATCAGTGAGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEPGDPI*ISEFRF
Trigger: AAAGCGGAACTCACTGATTCATATTGGATCCCCAGG...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCAGAGCATGGCATGGTaGGGTGATCCCATTACTAAA +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQQSMAW*GDPITK
Trigger: TTTAGTAATGGGATCACCTCACCATGCCATGCTCTG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATATCCTGCCCCTCTCGGTaGTCTCTCTCCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGISCPSR*SLSSGP
Trigger: GGGACCAGAGGAGAGAGAGCACCGAGAGGGGCAGGA...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGTGGTGGTGCTGGTGCTaGGGCGGGTGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLWWCWC*GGCCGG
Trigger: CCCACCACAGCACCCGCCGCAGCACCAGCACCACCA...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAGTAATTCACGCAAATTaGTGTTCCTTGGCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEVIHAN*CSLAQW
Trigger: CCACTGCGCCAAGGAACAGCAATTTGCGTGAATTAC...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGCACCAGCCTGCTGCTaGCGCCGTAACTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPAPACC*RRNSFC
Trigger: ACAGAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATACTGGCACCAGCCTGCTaGTGCCGCCGTAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGILAPAC*CRRNSF
Trigger: GAAGGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAG...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACAAGAAGCAGAATCTaGTGTTCAACTGGCACCACT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTRSRI*CSTGTT
Trigger: AGTGGTGCCAGTTGAACAGCAGATTCTGCTTCTTGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAAAAGTCTGTTTCAATaGCTACTTTTCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTKSLFQ*LLFRDN
Trigger: GTTGTCTCTGAAAAGTAGGCATTGAAACAGACTTTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCAGCGGATGCCCCTGTaGCGCCAAACACCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNQRMPL*RQTPWP
Trigger: GGGCCAGGGTGTTTGGCGGCACAGGGGCATCCGCTG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCAGGCCATCCAGCGGATaGCCCTGTGCCGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPRPSSG*PCAAKH
Trigger: GTGTTTGGCGGCACAGGGGCATCCGCTGGATGGCCT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTACATGACTAGGACCTaGCTTCGACAAGCGTCTGAT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNYMTRT*LRQASD
Trigger: ATCAGACGCTTGTCGAAGGCAGGTCCTAGTCATGTA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAAAAGGTCACACTCTGTaGTTTGCTGCTGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEKGHTL*FAAVVP
Trigger: AGGTACCACAGCAGCAAAGCACAGAGTGTGACCTTT...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCGCACGAACCGCACACTaGGGGACGCCGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPARTAH*GTPASL
Trigger: CAAAGATGCCGGCGTCCCGCAGTGTGCGGTTCGTGC...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAAGGAGGCGGTGGTGGTaGAGGGGGACTTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIRRRWW*RGTSLF
Trigger: GAACAGCGAAGTCCCCCTCCACCACCACCGCCTCCT...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATTGCTGATTAAATGCTaGTCCTGGCTGAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLLIKC*SWLSEW
Trigger: CCATTCACTCAGCCAGGACCAGCATTTAATCAGCAA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCGGCTGTCCTGGGCCTaGCAGGAACGGCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPRLSWA*QERLSR
Trigger: CCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTACAGTGGGTTACCGTTaGTGGGTGATGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSTVGYR*WVMVTV
Trigger: CACTGTCACCATCACCCACCAACGGTAACCCACTGT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGTGGATGGTACAAAATTaGATGTTTTGGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGWMVQN*MFWAER
Trigger: ACGTTCAGCCCAAAACATCCAATTTTGTACCATCCA...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCCATGTTGGCACTGGATaGTACAAAATTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: DTDSSHLGLEESHPHPACHVGTG*YKIGCF
Trigger: AAAACATCCAATTTTGTACCATCCAGTGCCAACATG...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GCCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGAGCAGCTGTAGGCCAGGCTTATCAAACTaGTCAAAGTCATCATCTCCG +
Preference number: 4 (lower is better)
Translates to: ATFSRPARNHSMYKSSCRPGLSN*SKSSSP
Trigger: CGGAGATGATGACTTTGACCAGTTTGATAAGCCTGG...CCTACAGCTGCTCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATCTGTAAACTCTGAATaGGTCCCACTGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESSVNSE*VPLTSA
Trigger: TGCTGATGTCAGTGGGACCCATTCAGAGTTTACAGA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTCTGTAAACTCTGAATaGGTCCCACTGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSVNSE*VPLTSA
Trigger: TGCTGATGTCAGTGGGACCCATTCAGAGTTTACAGA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTCAGACTCGTCTCATTTaGGGCTGGAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSQTRLI*GWKKAT
Trigger: GGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTG...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AAAACAGGTCTGTTCCACCTTCAGGCCATTCCACCACCTCATGTGTGGTGGGAAATGTTTCTTAAGAGCTaGCAGTCCTCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KTGLFHLQAIPPPHVWWEMFLKS*QSSPGR
Trigger: TCTCCCTGGAGAGGACTGCCAGCTCTTAAGAAACAT...TTCCCACCACACATGAGGTGGTGGAATGGCCTGAAGGTGGAACAGACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp ACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACTTTCCTTTCAGTTTTaGAACGTAATCGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: THSKVRPLSGRQPQLPSQLSFQF*NVIVQI
Trigger: AATCTGGACGATTACGTTTCAAAACTGAAAGGAAAG...TTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGCTGGTAAACCTCTCATaGAATTTTATACAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PLAYILRSCIMPEPLALGLVNLS*NFIQMS
Trigger: GCTCATCTGTATAAAATTTCATGAGAGGTTTACCAG...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTTCATCTGTTGTCCTTaGTACTGCATGTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNFICCP*YCMLAL
Trigger: CAGTGCCAACATGCAGTATCAAGGACAACAGATGAA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGAGCATCTGTAAACTCTaGATGGGTCCCACTGACATC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSSICKL*MGPTDI
Trigger: GATGTCAGTGGGACCCATTCAGAGTTTACAGATGCT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCTGTGGAATTTCTGCTaGAATGCTAATGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSLWNFC*NANAWA
Trigger: AGCCCACGCATTAGCATTTCAGCAGAAATTCCACAG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCGAGTTAAGCTTGGTTaGGAAGACTCTTCTAACCTG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQRVKLG*EDSSNL
Trigger: CAGGTTAGAAGAGTCTTCTCAACCAAGCTTAACTCG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACAGAGCATGGCATGGTaGGGTGATCCCATTACTAAA +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESQSMAW*GDPITK
Trigger: TTTAGTAATGGGATCACCTCACCATGCCATGCTCTG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGTGGAGGAATAAATCGTaGGTGAAGACCTGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSWRNKS*VKTCRS
Trigger: GCTTCGACAGGTCTTCACTCACGATTTATTCCTCCA...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTCTTCACACAGATCCTaGAAAAGTTACCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQASSHRS*KSYHSS
Trigger: ACTGCTGTGGTAACTTTTTCAGGATCTGTGTGAAGA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGACCGGACCTGGAGGCTaGAAGGCTGGTCGTACGGGC +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLTGPGG*KAGRTG
Trigger: GCCCGTACGACCAGCCTTGCAGCCTCCAGGTCCGGT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCCAGGCTGGCTAAAGTaGAGAATCCCCACCGGACCT +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPPGWLK*RIPTGP
Trigger: AGGTCCGGTGGGGATTCTGCACTTTAGCCAGCCTGG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGGGGAGCGTACAGCTaGTGCTGTTGCTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGGAYS*CCCCAS
Trigger: ACTCGCGCAGCAACAGCAGCAGCTGTACGCTCCCCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCCTCTGCCTCGTCCGTaGATGATGGCCTTCTTCGCC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPPLPRP*MMAFFA
Trigger: GGCGAAGAAGGCCATCATGCACGGACGAGGCAGAGG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATGAAAGTCTGCCTATGTaGACGTGTAGACAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNESLPM*TCRQLE
Trigger: CTCTAACTGTCTACACGTGCACATAGGCAGACTTTC...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCAAACCACGGGCTTATaGACCTCAGAAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSQTTGL*TSEVRH
Trigger: ATGCCTAACTTCTGAGGTGCATAAGCCCGTGGTTTG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGGTGGAGGGGGAGCCTaGGGCTCTCTAGAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIGGGGA*GSLEAL
Trigger: TAAAGCCTCTAGAGAGCCCCAGGCTCCCCCTCCACC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGTTGCCGACCCAGGCTaGCTAAAGTGCAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPVADPG*LKCRIP
Trigger: GGGGATTCTGCACTTTAGCCAGCCTGGGTCGGCAAC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCAATCAGGCCCGTGGCTaGCTGGCGCTCTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPNQARG*LALWRT
Trigger: TGTTCTCCAGAGCGCCAGCCAGCCACGGGCCTGATT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCATTTTCGATGGTTGTaGGTATTGAGTGAGGTCGGA +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQHFRWL*VLSEVG
Trigger: TCCGACCTCACTCAATACCCACAACCATCGAAAATG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGATGTTTCTTAAGAGCTaGCAGTCCTCTCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSMFLKS*QSSPGR
Trigger: TCTCCCTGGAGAGGACTGCCAGCTCTTAAGAAACAT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTAGCAGAAGGTATACCTaGGGATCCAATATGAATCAG +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSRRYT*GSNMNQ
Trigger: CTGATTCATATTGGATCCCCAGGTATACCTTCTGCT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTGGGAGAAAACAGGATaGAGATCAAACCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAWEKTG*RSNPEK
Trigger: TTTCTCTGGGTTTGATCTCCATCCTGTTTTCTCCCA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTGGGAGAAAACAGGATaGAGATCAAACCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPWEKTG*RSNPEK
Trigger: TTTCTCTGGGTTTGATCTCCATCCTGTTTTCTCCCA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp GATCGGGAGCACTTTATGCAGCGGCTGAGTCTGACTTaGAGGAACTGTTCTGGTCTGTCTCAAATGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DREHFMQRLSLT*RNCSGLSQMFQ
Trigger: CTGAAACATTTGAGACAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCGCTGCATAAAGTGCTCCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTCTTCTGGGTACTCTTaGGTATACAATTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSSGYS*VYNSDP
Trigger: TGGATCAGAATTGTATACTCAAGAGTACCCAGAAGA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp ATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACTTTCCTTTCAGTTTTaGAACGTAATCGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: INSTHSKVRPLSGRQPQLLSFQF*NVIVQI
Trigger: AATCTGGACGATTACGTTTCAAAACTGAAAGGAAAG...TAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNESKSL*SIIESD
Trigger: GTCTGACTCTATGATCGATCACAGTGACTTAGATTC...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGTGGCTTCCTGGGACTaGCTGCTGCAACAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNVASWD*LLQQPL
Trigger: CAGGGGCTGTTGCAGCAGTCAGTCCCAGGAAGCCAC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGTGGAGGAATAAATCGTaGGTGAAGACCTGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRWRNKS*VKTCRS
Trigger: GCTTCGACAGGTCTTCACTCACGATTTATTCCTCCA...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTTGGCGCAGTGGGCTaGATTTGCTGCATGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNLGAVG*ICCMGR
Trigger: GCGGCCCATGCAGCAAATGCAGCCCACTGCGCCAAG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTATTTTGTCTGACCTGTaGACCTGGAAAGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSILSDL*TWKGQQ
Trigger: CTGTTGCCCTTTCCAGGTGCACAGGTCAGACAAAAT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCACCACCCGCAGGTTCTaGTTGTTTGGCATCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPTTRRF*LFGIRR
Trigger: GCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTGGCTTTCCAGGGTATaGAAAGGTCAATCAACAATC +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQWLSRV*KGQSTI
Trigger: GATTGTTGATTGACCTTTGCATACCCTGGAAAGCCA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTGCCCTATCATTATTTaGTCAAATAGCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQACPIII*SNSSGP
Trigger: TGGACCTGAGCTATTTGAGCAAATAATGATAGGGCA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTTCTATGAGAAAGTCTaGCTATGTGCACGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNFYEKV*LCARVD
Trigger: GTCTACACGTGCACATAGGCAGACTTTCTCATAGAA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTACATGACTAGGACCTaGCTTCGACAAGCGTCTGAT +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSYMTRT*LRQASD
Trigger: ATCAGACGCTTGTCGAAGGCAGGTCCTAGTCATGTA...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGTGCAGCGGCTGCGGCTaGAACAGGCTTCTGATCGGC +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLCSGCG*NRLLIG
Trigger: GCCGATCAGAAGCCTGTTCCAGCCGCAGCCGCTGCA...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCTGGAGAGGGAGTCGTaGGGGCTGGCTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPLERES*GLAETV
Trigger: AACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGGTGGGGCTCTCCACTaGTCCTGGAGAGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNGGALH*SWRGSR
Trigger: ACGACTCCCTCTCCAGGACCAGTGGAGAGCCCCACC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAGGAGGCGGTGGTGGTaGAGGGGGACTTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNRRRWW*RGTSLF
Trigger: GAACAGCGAAGTCCCCCTCCACCACCACCGCCTCCT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGCAAAATTGGATGTTTTaGGCTGAACGTTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: FTCAEGVAEQRLLLISITQNWMF*AERLKY
Trigger: GTATTTCAAACGTTCAGCCCAAAACATCCAATTTTG...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGACTGCATGTTGGCACTaGATGGTACAAAATTGGATG +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQTACWH*MVQNWM
Trigger: CATCCAATTTTGTACCATCCAGTGCCAACATGCAGT...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTTGATACTGCATGTTaGCACTGGATGGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPLDTAC*HWMVQN
Trigger: ATTTTGTACCATCCAGTGCCAACATGCAGTATCAAG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAGCCACTCGAGGAGTCTaGGGGACAGCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGATRGV*GTAGSS
Trigger: GGAGGAGCCAGCTGTCCCCCAGACTCCTCGAGTGGC...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACCAGGCTTATCAAACTaGTCAAAGTCATCATCTCCG +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESPGLSN*SKSSSP
Trigger: CGGAGATGATGACTTTGACCAGTTTGATAAGCCTGG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCCAGTGGGTACTGAGTaGTTTGGATCTCTCTTAATT +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNPVGTE*FGSLLI
Trigger: AATTAAGAGAGATCCAAACCACTCAGTACCCACTGG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCGGAGAGCCCAGAGCATaGCATGGTGAGGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPGEPRA*HGEVIP
Trigger: TGGGATCACCTCACCATGCCATGCTCTGGGCTCTCC...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCATCTGACAAATCCGACTaGTTCTTTTTGCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESSDKSD*FFLPDS
Trigger: GCTATCTGGCAAAAAGAATCAGTCGGATTTGTCAGA...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AGCTACCATCCCCATGCCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACCATCTAAAGGTTCATTaGTCTCGATGTCTAACACTT +
Preference number: 4 (lower is better)
Translates to: SYHPHATFSRPARNHSMYHLKVH*SRCLTL
Trigger: AAGTGTTAGACATCGAGATCAATGAACCTTTAGATG...GTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGGCATGGGGATGGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR TCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACTTTCCTTTCAGTTTTaGAACGTAATCGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLSFQF*NVIVQI
Trigger: AATCTGGACGATTACGTTTCAAAACTGAAAGGAAAG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGAGGTTTCACTTGTGCTaGGGGCGTGGCAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLRFHLC*GRGRAA
Trigger: CGCTGCTCTGCCACGCCCTCAGCACAAGTGAAACCT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSESKSL*SIIESD
Trigger: GTCTGACTCTATGATCGATCACAGTGACTTAGATTC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCGAAATGAGTGGGCAGTaGCAGCCATGGGAACCTGCT +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPEMSGQ*QPWEPA
Trigger: AGCAGGTTCCCATGGCTGTCACTGCCCACTCATTTC...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCAACAACTGTTTGCCTaGGACCTTTACAAATCATGC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSQQLFA*DLYKSC
Trigger: GCATGATTTGTAAAGGTCTCAGGCAAACAGTTGTTG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACAACAACTGTTTGCCTaGGACCTTTACAAATCATGC +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESQQLFA*DLYKSC
Trigger: GCATGATTTGTAAAGGTCTCAGGCAAACAGTTGTTG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATTCCTGGCACCAGCCTaGTGCTGCCGCCGTAACTCC +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGFLAPA*CCRRNS
Trigger: GGAGTTACGGCGGCAGCAGCAGGCTGGTGCCAGGAA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCCTCTGCCTCGTCCGTaGATGATGGCCTTCTTCGCC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNPLPRP*MMAFFA
Trigger: GGCGAAGAAGGCCATCATGCACGGACGAGGCAGAGG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGAGGGCCATGCCGTGTaGCTGTCCAGCACATTGCCT +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNEGHAV*LSSTLP
Trigger: AGGCAATGTGCTGGACAGGCACACGGCATGGCCCTC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGAAAGTCTGCCTATGTaGACGTGTAGACAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRESLPM*TCRQLE
Trigger: CTCTAACTGTCTACACGTGCACATAGGCAGACTTTC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCCTCCGAACCTTTCCTaGCCTGCACACACTCCTATC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPPPNLS*PAHTPI
Trigger: GATAGGAGTGTGTGCAGGGCAGGAAAGGTTCGGAGG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGTGGTGGTAGTCGGGTaGCTCCGAACCTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNVVVVG*LRTFPA
Trigger: GGCAGGAAAGGTTCGGAGGCACCCGACTACCACCAC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGGGAGTCGTGGGGGCTaGCTGAAACTGTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPGSRGG*LKLLGT
Trigger: TGTTCCCAACAGTTTCAGCCAGCCCCCACGACTCCC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCTGGGCTGTGTGTGTGTaGGCAGAAACGGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPWAVCV*AETAVL
Trigger: CAGGACAGCCGTTTCTGCCCACACACACACAGCCCA...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGATGCGGAGGGGGCAATaGAGGATGCAACGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLMRRGQ*RMQRPL
Trigger: AAGGGGCCGTTGCATCCTCCATTGCCCCCTCCGCAT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGTGGATGGTACAAAATTaGATGTTTTGGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: ITATERIAGSGRPASALQWMVQN*MFWAER
Trigger: ACGTTCAGCCCAAAACATCCAATTTTGTACCATCCA...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTTTGAGGAACTGTTCTaGTCTGTCTCAAATGTTTCA +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAFEELF*SVSNVS
Trigger: TGAAACATTTGAGACAGACCAGAACAGTTCCTCAAA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLTLELM*GPSPPP
Trigger: TGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGACTACAGTAGCTTTATaGAGAATATGTCTCACCTAC +
Preference number: 4 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQATTVAL*RICLTY
Trigger: GTAGGTGAGACATATTCTCCATAAAGCTACTGTAGT...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTCTTCCACGAGGGTTTaGCTGGTGTGGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPSSTRV*LVWADF
Trigger: GAAGTCAGCCCACACCAGCCAAACCCTCGTGGAAGA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAGGTCCATATTTACATaGTATGCTAAATGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESRSIFT*YAKCSC
Trigger: GCAAGAGCATTTAGCATACCATGTAAATATGGACCT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGAATCTAAGTCACTGTaGTCGATCATAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSESKSL*SIIESD
Trigger: GTCTGACTCTATGATCGATCACAGTGACTTAGATTC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGATCCCATTACTAAATaGACAGTAGCAAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRDPITK*TVARSR
Trigger: CCTGCTTCTTGCTACTGTTCATTTAGTAATGGGATC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGGCAGTGGGCTGCATTTaGTGCATGGGCCGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLAVGCI*CMGRLL
Trigger: AAGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGC...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AAGAATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCGTCAACTCAGCTTCGTaGCCTTCATACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNEFYSTINSTHSKVRPLVNSAS*PSYCPS
Trigger: AGAAGGACAGTATGAAGGCCACGAAGCTGAGTTGAC...GAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCACCCCACTCACACCCTaGCTTTCCAGGGTATGCAAA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPTPLTP*LSRVCK
Trigger: TTTGCATACCCTGGAAAGCCAGGGTGTGAGTGGGGT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCACAGGGCAGCCCTGCTaGAACAGCCTTCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPTGQPC*NSLQKN
Trigger: GTTTTTCTGAAGGCTGTTCCAGCAGGGCTGCCCTGT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCTAAACCTTCATTACTaGGATTGTCTGGTACTAAGA +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNLNLHY*DCLVLR
Trigger: TCTTAGTACCAGACAATCCCAGTAATGAAGGTTTAG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAGGTCCATATTTACATaGTATGCTAAATGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNRSIFT*YAKCSC
Trigger: GCAAGAGCATTTAGCATACCATGTAAATATGGACCT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCTCTCTAGTTACATCTaGGAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRLSSYI*EPNNCS
Trigger: GGAACAATTATTAGGCTCTCAGATGTAACTAGAGAG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTCAGAAAAACAGAGGTaGCTGAAGCAGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPSEKQR*LKQWPP
Trigger: TGGTGGCCACTGCTTCAGTCACCTCTGTTTTTCTGA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCAGAGCAGCGGCTGCTaGTCATTTCTATCACGTGTG +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPQSSGC*SFLSRV
Trigger: CACACGTGATAGAAATGAGCAGCAGCCGCTGCTCTG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCCACTGTTTGTCCTGTaGGTGACAGTCCTTTTCACG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPPLFVL*VTVLFT
Trigger: CGTGAAAAGGACTGTCACGCACAGGACAAACAGTGG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGAAGACTCTTCTAACCTaGACTGAAGATAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRKTLLT*TEDKCN
Trigger: GTTGCACTTATCTTCAGTGCAGGTTAGAAGAGTCTT...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGACTGGAGAGGGAGTCGTaGGGGCTGGCTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGLERES*GLAETV
Trigger: AACAGTTTCAGCCAGCCCCCACGACTCCCTCTCCAG...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATACTCTCTTGGGAACACTaGCTGCTGTCCTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGILSWEH*LLSLLI
Trigger: AATCAGCAAGGACAGCAGCCAGTGTTCCCAAGAGAG...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp CTGGTACTAAGAATCCATTTTCGATGGTTGTGGGTATaGAGTGAGGTCGGACTGTGTTGGACTGTTCTAATC +
Preference number: 4 (lower is better)
Translates to: LVLRIHFRWLWV*SEVGLCWTVLI
Trigger: GATTAGAACAGTCCAACACAGTCCGACCTCACTCAATACCCACAACCATCGAAAATGGATTCTTAGTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCCTCTCTAGTTACATCTaGGAGCCTAATAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: NEFYSTINSTHSKVRPLSLSSYI*EPNNCS
Trigger: GGAACAATTATTAGGCTCTCAGATGTAACTAGAGAG...GGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACTGCCTTGGCCTCTGCTaGAAGCTCCAAAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNCLGLC*KLQSFW
Trigger: CCAGAAACTTTGGAGCTTTCAGCAGAGGCCAAGGCA...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTCTTCACATTTTGTCTaGCCTGTGCACCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPSSHFV*PVHLER
Trigger: CCTTTCCAGGTGCACAGGTCAGACAAAATGTGAAGA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGCCTTCTTCGCCGGGTaGATTCCTTGGATGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNAFFAG*IPWMLL
Trigger: CAAAAGCATCCAAGGAATTCACCCGGCGAAGAAGGC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCCCTGGGGATCCAATATaGATCAGTGAGTTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPPGDPI*ISEFRF
Trigger: AAAGCGGAACTCACTGATTCATATTGGATCCCCAGG...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGAAAAGTCTGTTTCAATaGCTACTTTTCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSKSLFQ*LLFRDN
Trigger: GTTGTCTCTGAAAAGTAGGCATTGAAACAGACTTTT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCGACCTCCTTGTCCTGTaGAATTACATGACTAGGACC +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPDLLVL*NYMTRT
Trigger: GGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTC...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCGTCAACTCAGCTTCGTaGCCTTCATACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPVNSAS*PSYCPS
Trigger: AGAAGGACAGTATGAAGGCCACGAAGCTGAGTTGAC...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGCAAAATTGGATGTTTTaGGCTGAACGTTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSQNWMF*AERLKY
Trigger: GTATTTCAAACGTTCAGCCCAAAACATCCAATTTTG...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAAGAAAAGAAGTAACTTaGCTCCACATAATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: PAACSVTLKHTANATLESRKEVT*LHIISY
Trigger: ATAGCTGATTATGTGGAGCCAAGTTACTTCTTTTCT...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
3UTR CAA 72 bp ATGAAGACACTAAAAGGTACAAAATATAAACCGGTCTaGTCCAGAATTCGCCCTGACAACCTCAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: MKTLKGTKYKPV*SRIRPDNLRVL
Trigger: CAAGACCCTGAGGTTGTCAGGGCGAATTCTGGACAAGACCGGTTTATATTTTGTACCTTTTAGTGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR TCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTTCTGACAAATCCGACTaGTTCTTTTTGCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPSDKSD*FFLPDS
Trigger: GCTATCTGGCAAAAAGAATCAGTCGGATTTGTCAGA...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCCATCTAAAGGTTCATTaGTCTCGATGTCTAACACTT +
Preference number: 4 (lower is better)
Translates to: NEFYSTINSTHSKVRPLSHLKVH*SRCLTL
Trigger: AAGTGTTAGACATCGAGATCAATGAACCTTTAGATG...GGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR TCA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCCTTCAAATAACCAGTaGACAGCAACATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPPSNNQ*TATSSS
Trigger: GGAAGAAGATGTTGCTGTTCACTGGTTATTTGAAGG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAACCACACAGACAGCATaGAAGGGAACCGCATACAGC +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGTTQTA*KGTAYS
Trigger: GCTGTATGCGGTTCCCTTTCATGCTGTCTGTGTGGT...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCCACATCTGCAGGTTTaGTCGGGAGCACTTTATGCA +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLPHLQV*SGALYA
Trigger: TGCATAAAGTGCTCCCGATCAAACCTGCAGATGTGG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCCACATCTGCAGGTTTaGTCGGGAGCACTTTATGCA +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNPHLQV*SGALYA
Trigger: TGCATAAAGTGCTCCCGATCAAACCTGCAGATGTGG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACTCCTGTGCAATTACATaGCTAGGACCTGCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNSCAIT*LGPAFD
Trigger: GTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGA...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGGCTGCATGGGCCGCTTaGTTACATTCTGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLAAWAA*LHSEKL
Trigger: CAACTTCTCAGAATGTAAGCAAGCGGCCCATGCAGC...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGAACCTTTCCTGCCCTaGACACACTCCTATCAGTCA +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNEPFLP*THSYQS
Trigger: TGACTGATAGGAGTGTGTGCAGGGCAGGAAAGGTTC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGATGCTGTGGAAATTCTaGAGGGCCTGGGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLMLWKF*RAWESL
Trigger: CAGAGATTCCCAGGCCCTCCAGAATTTCCACAGCAT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATCCAGGTGTATGCTGTaGAAATTCTGGAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGSRCML*KFWRAW
Trigger: CCAGGCCCTCCAGAATTTCCACAGCATACACCTGGA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTCTCTTGGGAACACTaGCTGCTGTCCTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNLSWEH*LLSLLI
Trigger: AATCAGCAAGGACAGCAGCCAGTGTTCCCAAGAGAG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCAAATTGCTGTTCCTTaGCGCAGTGGGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLQIAVP*RSGLHL
Trigger: CAAATGCAGCCCACTGCGCCAAGGAACAGCAATTTG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTCTGTAAACTCTGAATaGGTCCCACTGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPSVNSE*VPLTSA
Trigger: TGCTGATGTCAGTGGGACCCATTCAGAGTTTACAGA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTAGAAAAGAAGTAACTTaGCTCCACATAATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSRKEVT*LHIISY
Trigger: ATAGCTGATTATGTGGAGCCAAGTTACTTCTTTTCT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAAACAAAGAAGCGGGTaGTTAAGGGCACGAACCGCA +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNKQRSG*LRARTA
Trigger: TGCGGTTCGTGCCCTTAACCACCCGCTTCTTTGTTT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTCTTCACACAGATCCTaGAAAAGTTACCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPSSHRS*KSYHSS
Trigger: ACTGCTGTGGTAACTTTTTCAGGATCTGTGTGAAGA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAACAGGTCCAGGTGTATaGTGTGGAAATTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGTGPGV*CGNSGG
Trigger: CCCTCCAGAATTTCCACAGCATACACCTGGACCTGT...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCAACAAAGATAATGGTTaGAGCAGATCTTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPNKDNG*SRSSTR
Trigger: CCTCGTGGAAGATCTGCTGCAACCATTATCTTTGTT...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTGTTCCAGAAAAAGATaGCTCGGGAATCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: NSTTVALWRICLTYRNLPCSRKR*LGNLGS
Trigger: TGAACCAAGATTCCCGAGCCATCTTTTTCTGGAACA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAACTGCATGTTGGCACTaGATGGTACAAAATTGGATG +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGITACWH*MVQNWM
Trigger: CATCCAATTTTGTACCATCCAGTGCCAACATGCAGT...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp ACACTAAAAGGTACAAAATATAAACCGGTCTTGTCCAGAATTCGCCCTGACAACTCTTCTGGGTACTCTTaGGTATACAATTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: TLKGTKYKPVLSRIRPDNSSGYS*VYNSDP
Trigger: TGGATCAGAATTGTATACTCAAGAGTACCCAGAAGA...GTTGTCAGGGCGAATTCTGGACAAGACCGGTTTATATTTTGTACCTTTTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR TCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAAAAACAGAGGTGACTaGAGCAGTGGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNKNRGD*SSGHQI
Trigger: AATTTGGTGGCCACTGCTTCAGTCACCTCTGTTTTT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR TCA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCTTGGATGTTTTGGGCTaGACGTTTGAAATACTGACA +
Preference number: 4 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPLDVLG*TFEILT
Trigger: TGTCAGTATTTCAAACGTTCAGCCCAAAACATCCAA...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR GCA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACACAATAGTACCTGTCTaGCTATCCACTCTATGGAAC +
Preference number: 4 (lower is better)
Translates to: RMNSTTVALWRICLTYRNTIVPV*LSTLWN
Trigger: GTTCCATAGAGTGGATAGGCAGACAGGTACTATTGT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAGCACTCTCAAACGATaGCATCAAAACCAACTCGCT +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGSTLKR*HQNQLA
Trigger: AGCGAGTTGGTTTTGATGCCATCGTTTGAGAGTGCT...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp GGCGTTTCTGTTCTTCTATCTTTAAGCGATATAACCTaGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSVLLSLSDIT*FPHLHQETLFL
Trigger: CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAAACGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp GTTTCCTTCAAGGAAACTAAACCTTCATTACTGGGATaGTCTGGTACTAAGAATCCATTTTCGATGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VSFKETKPSLLG*SGTKNPFSMVV
Trigger: CACAACCATCGAAAATGGATTCTTAGTACCAGACAATCCCAGTAATGAAGGTTTAGTTTCCTTGAAGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGCTCTGTTTCTGTTTTTaGCTCTTCTTTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLLCFCF*LFFRLS
Trigger: GCTCAACCTAAAGAAGAGGCAAAAACAGAAACAGAG...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CCA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATATTCATTTTCCGTTTTTaGCTTAGATACGTATTCCAC +
Preference number: 4 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIFIFRF*LRYVFH
Trigger: GTGGAATACGTATCTAAGCCAAAAACGGAAAATGAA...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307403.6
3UTR CAA 72 bp GGTCAATCAACAATCACCCAAATTTTAATCTACATTTaGTACAAGAGCCTTTTGAGGGCTGAGAAGACAACT +
Preference number: 4 (lower is better)
Translates to: GQSTITQILIYI*YKSLLRAEKTT
Trigger: AGTTGTCTTCTCAGCCCTCAAAAGGCTCTTGTACAAAATGTAGATTAAAATTTGGGTGATTGTTGATTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR GCA 90 bp TCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGAAACTCTGTTTCTGATCTTCTTCCCTCCATaGAAAGACTCTTTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SLSDITLFPHLHQETLFLIFFPP*KDSFQN
Trigger: GTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGAT...CAGAAACAGAGTTTCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR TCA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGACATCTAAAGGTTCATTaGTCTCGATGTCTAACACTT +
Preference number: 4 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGHLKVH*SRCLTL
Trigger: AAGTGTTAGACATCGAGATCAATGAACCTTTAGATG...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS CCA 90 bp GCCGAGGCCGCAGCAGCCCTGAGGCCGCCGCCGTGTTTCGGGCGGTaGGCGTGCAACGCAAACACGCGGCAGTCACCTCCGCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AEAAAALRPPPCFGR*ACNANTRQSPPPGS
Trigger: GGAGCCGGGCGGAGGTGACTGCCGCGTGTTTGCGTTGCACGCCCACCGCCCGAAACACGGCGGCGGCCTCAGGGCTGCTGCGGCCTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS CCA 90 bp GCAGGGCTGGGGCTTGCACTCCACCACCCGCAGGTTCTGCTTGTTTaGCATCAGGCGCCCCCGGCCCATGGGACCGGCCACTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: AGLGLALHHPQVLLV*HQAPPAHGTGHSSA
Trigger: GGCAGAGGAGTGGCCGGTCCCATGGGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS-3UTR CAA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGGTACGGGCCGCTCTCTaGGGAACACTGGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LALGALHPAAAGLRLSGLVRAAL*GTLAAV
Trigger: GACAGCAGCCAGTGTTCCCAAGAGAGCGGCCCGTAC...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS CCA 90 bp TGGCCCTTCGCCTCCGCAGGAAGAAAACAACAAACTACCGCAACATaGCCGCGCGCCCGCGCCCGCCGCGGTGCACCCTGGGATGATGGA +
Preference number: 5 (lower is better)
Translates to: WPFASAGRKQQTTAT*PRARARRGAPWDDG
Trigger: TCCATCATCCCAGGGTGCACCGCGGCGGGCGCGGGCGCGCGGCCATGTTGCGGTAGTTTGTTGTTTTCTTCCTGCGGAGGCGAAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS GCA 90 bp TGGACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTGGGGCTTaGACTCCACCACCCGCAGGTTCTGCTTGTTTGGCATCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: WTRTAPPQTPRRAGA*TPPPAGSACLASGA
Trigger: GGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CCA 90 bp TGGGTCCCACTGACATCAGCAGGCTCTTCAGCTGGGCATCCGTGGTaGACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: WVPLTSAGSSAGHPW*TRTAPPQTPRRAGA
Trigger: AGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGGGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000392761.3
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTGTGGCGGGGGCTGTaGCTGAGGTTGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLWRGL*LRLLRL
Trigger: CAGCCTCAGCAACCTCAGCAACAGCCCCCGCCACAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCTGGTCAGCGTCACCTaGCGGGCAGGCTGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVALVSVT*RAGCGP
Trigger: GGGACCACAGCCTGCCCGCAAGGTGACGCTGACCAG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGAACGGCCCCTGCAGGTaGGGCTGTGTGTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGNGPCR*GCVCVG
Trigger: GCCCACACACACACAGCCCAACCTGCAGGGGCCGTT...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CCA 90 bp TCCGTGGTGGACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTaGGGCTTGCACTCCACCACCCGCAGGTTCTGCTTGTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: SVVDEDSPSTDTTQG*GLHSTTRRFCLFGI
Trigger: GATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCACCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CCA 90 bp GAATGGGTCCCACTGACATCAGCAGGCTCTTCAGCTGGGCATCCGTaGTGGACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: EWVPLTSAGSSAGHP*WTRTAPPQTPRRAG
Trigger: CCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGGGACCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000392761.3
ENST00000401878.8
CDS CCA 90 bp GCCTGGGGCACGACAGGAGGCTGTGTAGGAAGCAGCGCAGGTCTGTaGTCCTTCATCCTGCCCCTCTCGGTGCTCTCTCTCCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AWGTTGGCVGSSAGL*SFILPLSVLSLLWS
Trigger: GGACCAGAGGAGAGAGAGCACCGAGAGGGGCAGGATGAAGGACCACAGACCTGCGCTGCTTCCTACACAGCCTCCTGTCGTGCCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392761.3
ENST00000401878.8
ENST00000486747.1
CDS-3UTR CAA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGTACGGGCCGCTCTCTaGGGAACACTGGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGVRAAL*GTLAAV
Trigger: GACAGCAGCCAGTGTTCCCAAGAGAGCGGCCCGTAC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AAAGGAGGGGGCGGGACGGACAGGTGGTGGTGGTGGTGGTGGTGCTGGTGCTGCTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: KGGGGTDRWWWWWWCWCCLITLT*ELMWGP
Trigger: CGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAA...GCAGCACCAGCACCACCACCACCACCACCACCTGTCCGTCCCGCCCCCTCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS TCA 90 bp GTGGCACAGATGCCACCCCCAGGCGGCTACCTGAATGGGTCCCACTaGCATCAGCAGGCTCTTCAGCTGGGCATCCGTGGTGGACGAGGA +
Preference number: 5 (lower is better)
Translates to: VAQMPPPGGYLNGSH*HQQALQLGIRGGRG
Trigger: TCCTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAGGTAGCCGCCTGGGGGTGGCATCTGTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS CCA 90 bp GCTGCAGGAGGCAGAGGCGAAGCCGGGCGCTTCGCGGTCCACAGCTaGCCCTTCGCCTCCGCAGGAAGAAAACAACAAACTACCGCAACA +
Preference number: 5 (lower is better)
Translates to: AAGGRGEAGRFAVHS*PFASAGRKQQTTAT
Trigger: TGTTGCGGTAGTTTGTTGTTTTCTTCCTGCGGAGGCGAAGGGCCAGCTGTGGACCGCGAAGCGCCCGGCTTCGCCTCTGCCTCCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000401878.8
CDS CCA 90 bp CCCCTGCAGGTTGGGCTGTGTGTGTGTGGGCAGAAACGGCTGTCCTaGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGT +
Preference number: 5 (lower is better)
Translates to: PLQVGLCVCGQKRLS*AWQERLSRRNEGPC
Trigger: ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCGTTTCTGCCCACACACACACAGCCCAACCTGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392761.3
ENST00000401878.8
CDS-3UTR CAA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCGCAGTGGGCTGCATTaGCTGCATGGGCCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLRSGLH*LHGPLA
Trigger: AGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGGTACAGCTGCTGCTGTaGCTGCGCGAGTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQVQLLL*LRESLQ
Trigger: CTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTAC...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGCAGGTTCTGCTTGTTaGGCATCAGGCGCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPAGSAC*ASGAPG
Trigger: GCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGC...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS TCA 90 bp GGACACAACTACCCGTGGCACAGATGCCACCCCCAGGCGGCTACCTaGATGGGTCCCACTGACATCAGCAGGCTCTTCAGCTGGGCATCC +
Preference number: 5 (lower is better)
Translates to: GHNYPWHRCHPQAAT*MGPTDISRLFSWAS
Trigger: GGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAGGTAGCCGCCTGGGGGTGGCATCTGTGCCACGGGTAGTTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS-3UTR CAA 90 bp GCCTCCTGCAGGCATGGTGAGGCAGGGCTGACTGGCAATCCCATCTTCCGAGGGGGAGCTGTAGCGTCCTaGTTTATGCTGTCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ASCRHGEAGLTGNPIFRGGAVAS*FMLSLP
Trigger: AGGGAGCGACAGCATAAACAAGGACGCTACAGCTCC...CCCTCGGAAGATGGGATTGCCAGTCAGCCCTGCCTCACCATGCCTGCAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTCTGTGGCGGGGGCTGTaGCTGAGGTTGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPLWRGL*LRLLRL
Trigger: CAGCCTCAGCAACCTCAGCAACAGCCCCCGCCACAG...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GAGCTTCTGGAACCCGCCACGGCCCGCGAGGGTGGTGACGCGCTGACGATAGGTACAGGGCTAGCTGGCTaGACTTTCACTTCCGTCTTT +
Preference number: 5 (lower is better)
Translates to: ELLEPATAREGGDALTIGTGLAG*TFTSVF
Trigger: AAAGACGGAAGTGAAAGTCAAGCCAGCTAGCCCTGT...ACCTATCGTCAGCGCGTCACCACCCTCGCGGGCCGTGGCGGGTTCCAGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLLITLT*ELMWGP
Trigger: CGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAA...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CCA 90 bp CCACACCACGACACATCAGCGGACCTCCTCGCCGTCCTCCCCGCCTaGAGCTGTAGCGTCCTTGTTTATGCTGTCGCTCCCTTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PHHDTSADLLAVLPA*SCSVLVYAVAPFLQ
Trigger: TTGAAGAAAGGGAGCGACAGCATAAACAAGGACGCTACAGCTCCAGGCGGGGAGGACGGCGAGGAGGTCCGCTGATGTGTCGTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307403.6
ENST00000392761.3
ENST00000401878.8
ENST00000440108.5
ENST00000486747.1
CDS CCA 90 bp GGAAGTATCACGACAGGAGGCTGTGTAGGAAGCAGCGCAGGTCTGTaGTCCTTCATCCTGCCCCTCTCGGTGCTCTCTCTCCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GSITTGGCVGSSAGL*SFILPLSVLSLLWS
Trigger: GGACCAGAGGAGAGAGAGCACCGAGAGGGGCAGGATGAAGGACCACAGACCTGCGCTGCTTCCTACACAGCCTCCTGTCGTGATACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS CCA 90 bp CCCTGCCCACCTGACAGCTTAATCACCCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCACTGTTTGTCCTGTGCGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: PCPPDSLITLTLELM*GPSPPPLFVLCVTV
Trigger: GACTGTCACGCACAGGACAAACAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS CCA 90 bp CCTCCCCCACCTGACAGCTTAATCACCCTGACCTTGGAGCTGATGTaGGGCCCGTCTCCACCACCACTGTTTGTCCTGTGCGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: PPPPDSLITLTLELM*GPSPPPLFVLCVTV
Trigger: GACTGTCACGCACAGGACAAACAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CTGGCGCTGGGGGCACTGCATCCGGCTGCTGCTGGCCTGAGGCTGAGCGGTCTGCAGTTCATCCTCTCCTaGTTCTTGTTCATACTCAGA +
Preference number: 5 (lower is better)
Translates to: LALGALHPAAAGLRLSGLQFILS*FLFILR
Trigger: TCTGAGTATGAACAAGAACAAGGAGAGGATGAACTG...CAGACCGCTCAGCCTCAGGCCAGCAGCAGCCGGATGCAGTGCCCCCAGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTCGGCTGAGTCTGACTTaGAGGAACTGTTCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCRLSLT*RNCSGL
Trigger: CAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCG...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTTTTCACGCCAGGCTTaGTGTCCTGGGGCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPFSRQA*CPGAGP
Trigger: AGGGCCGGCCCCAGGACACAAAGCCTGGCGTGAAAA...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCGCCGGGTGAATTCCTaGGATGCTTTTGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVARRVNS*DAFDPW
Trigger: CCAGGGATCAAAAGCATCCAAGGAATTCACCCGGCG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCACGGCCGGCAGCTCCCTaGAAGAAATTCCACAGTGTG +
Preference number: 5 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPRPAAP*KKFHSV
Trigger: CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCG...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGACAGACTCGTCTCATTaGGGGCTGGAAGAAAGCCAC +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQTDSSH*GLEESH
Trigger: GTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCCTTTGAAGTGCGGGTaGATGTGTATGTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQPLKCG*MCMFLG
Trigger: GCCCAAGAACATACACATCAACCCGCACTTCAAAGG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGGGGCTGTTGCTGAGGTaGCTGAGGCTGAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PLAYILRSCIMPEPLALGGLLLR*LRLRLM
Trigger: CATCAGCCTCAGCCTCAGCAACCTCAGCAACAGCCC...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCAACAGTGGGTTACCGTaGGTGGGTGATGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSNSGLP*VGDGDS
Trigger: ACTGTCACCATCACCCACCAACGGTAACCCACTGTT...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCGCGTGGGCTGGCTCCTaGAACTTAGCTATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTAWAGS*NLAMAF
Trigger: GAAAGCCATAGCTAAGTTCAAGGAGCCAGCCCACGC...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp TCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTGCGATGGTTGTGGGTATaGAGTGAGGTCGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: SSLLCPVSSAPLESGPWLRWLWV*SEVGLC
Trigger: ACACAGTCCGACCTCACTCAATACCCACAACCATCG...CAGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCAGCTTACACAGTCCTaGCAAAACCAGCTTCCGCCA +
Preference number: 5 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAQLTQS*QNQLPP
Trigger: TGGCGGAAGCTGGTTTTGCAAGGACTGTGTAAGCTG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCTGTCGAAGCAAAGGTaGAGAGGTGATGGAGTGGTA +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQLSKQR*RGDGVV
Trigger: TACCACTCCATCACCTCTCAACCTTTGCTTCGACAG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTCAAGCAATGCTGCCTaGGCCTCTGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: DTDSSHLGLEESHPHPACSSNAA*ASAESS
Trigger: GGAGCTTTCAGCAGAGGCCAAGGCAGCATTGCTTGA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTTGCATTACCTGCAGGTaGGGCTGTGTGTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPCITCR*GCVCVG
Trigger: GCCCACACACACACAGCCCAACCTGCAGGTAATGCA...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCAACAGTGGGTTACCGTaGGTGGGTGATGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPNSGLP*VGDGDS
Trigger: ACTGTCACCATCACCCACCAACGGTAACCCACTGTT...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp ACTGTCCCAGCTGATCACCACCCAGTGAAGACGTTCCCCTCCCCCACTCCTCCAATTCCTTGGATGCTTTaGATCCCTGGAGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: TVPADHHPVKTFPSPTPPIPWML*IPGGTG
Trigger: GCCTGTCCCTCCAGGGATCAAAAGCATCCAAGGAAT...TGGAGGAGTGGGGGAGGGGAACGTCTTCACTGGGTGGTGATCAGCTGGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGGCAGGTTCTGCTTGTTaGGCATCAGGCGCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: ITATERIAGSGRPASALQAGSAC*ASGAPG
Trigger: GCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGC...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACCCGCAGGTTCTGCTaGTTTGGCATCAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTRRFC*FGIRRP
Trigger: GGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCTGCCTGTCCAGCACATaGCCTTATCTGGGAAGTGTG +
Preference number: 5 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTCLSST*PYLGSV
Trigger: CACACTTCCCAGATAAGGCAATGTGCTGGACAGGCA...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGTCAAGCAATGCTGCCTaGGCCTCTGCTGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLAYILRSCIMPEPLALGSSNAA*ASAESS
Trigger: GGAGCTTTCAGCAGAGGCCAAGGCAGCATTGCTTGA...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTGGCTGGCTGAAACTGTaGGGAACAGGTCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPGWLKL*GTGPGV
Trigger: TACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCC...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTTTTCACGCCAGGCTTaGTGTCCTGGGGCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNFSRQA*CPGAGP
Trigger: AGGGCCGGCCCCAGGACACAAAGCCTGGCGTGAAAA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCCTGTCGAAGCAAAGGTaGAGAGGTGATGGAGTGGTA +
Preference number: 5 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTLSKQR*RGDGVV
Trigger: TACCACTCCATCACCTCTCAACCTTTGCTTCGACAG...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGCACTGGCTGCTGTCCTaGCTGATTAAATGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PLAYILRSCIMPEPLALGHWLLS*LIKCWS
Trigger: GGACCAGCATTTAATCAGCAAGGACAGCAGCCAGTG...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTCAGTGCTTTCATCTGTaGTCCTTGATACTGCATGTT +
Preference number: 5 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCQCFHL*SLILHV
Trigger: AACATGCAGTATCAAGGACAACAGATGAAAGCACTG...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCAGTGCTTTCATCTGTaGTCCTTGATACTGCATGTT +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQQCFHL*SLILHV
Trigger: AACATGCAGTATCAAGGACAACAGATGAAAGCACTG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGACCCGCAGGTTCTGCTaGTTTGGCATCAGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSTRRFC*FGIRRP
Trigger: GGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCCTTCATTACTGGGATaGTCTGGTACTAAGAATCCA +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQPSLLG*SGTKNP
Trigger: TGGATTCTTAGTACCAGACAATCCCAGTAATGAAGG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp ATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACTCTTGCAGCCCTTGTaGCCCACCATAAGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: INSTHSKVRPLSGRQPQLLLQPL*PTISLQ
Trigger: TTGCAGGCTTATGGTGGGCAACAAGGGCTGCAAGAG...TAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp CCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGAGCAGCTGTAGGCCTGCTCTTGCAGCCCTaGTTGCCCACCATAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PPFQDQPGTTACTRAAVGLLLQP*LPTISL
Trigger: CAGGCTTATGGTGGGCAACAAGGGCTGCAAGAGCAG...GCCTACAGCTGCTCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGTGACCACCGTCCCTTaGAAGTGCGGGTTGATGTGT +
Preference number: 5 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAVTTVP*KCGLMC
Trigger: ACACATCAACCCGCACTTCAAAGGGACGGTGGTCAC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGGGCTGGCTGAAACTGTaGGGAACAGGTCCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQAGWLKL*GTGPGV
Trigger: TACACCTGGACCTGTTCCCAACAGTTTCAGCCAGCC...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTGATGGCTCGGGAATCTaGGTTCACCTGAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPDGSGI*VHLKLL
Trigger: TAGGAGTTTCAGGTGAACCAAGATTCCCGAGCCATC...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GTGTATGTTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCATCATCCTGGTAATTCACGCAAATaGCTGTTCCTTGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: VYVLGLLWSHGWRGHHHPGNSRK*LFLGAV
Trigger: CACTGCGCCAAGGAACAGCAATTTGCGTGAATTACC...AGGATGATGATGACCCCGCCACCCGTGACTCCACAGCAGCCCAAGAACATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCTTTCATCTGTTGTCCTaGATACTGCATGTTGGCACT +
Preference number: 5 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSFHLLS*ILHVGT
Trigger: AGTGCCAACATGCAGTATCAAGGACAACAGATGAAA...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCGGCCGGCAGCTCCCTaGAAGAAATTCCACAGTGTG +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNRPAAP*KKFHSV
Trigger: CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCGTGGCTCCTTCATTACTGGGATaGTCTGGTACTAAGAATCCA +
Preference number: 5 (lower is better)
Translates to: LQPAVSCQFGSSGIRPVAPSLLG*SGTKNP
Trigger: TGGATTCTTAGTACCAGACAATCCCAGTAATGAAGG...AGCCACGGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGAGCTTCAACAACTGTTaGCCTGAGACCTTTACAAAT +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQSFNNC*PETFTN
Trigger: ATTTGTAAAGGTCTCAGGCAAACAGTTGTTGAAGCT...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCGCGAGTCTCTCCAGCAGCTCCTTCTTCCTGGCACCAGCGATTGGTCGTTAGTGTaGTCAGAGAGTTCAAATGAT +
Preference number: 5 (lower is better)
Translates to: LLLLLRESLQQLLLPGTSDWSLV*SESSND
Trigger: ATCATTTGAACTCTCTGACAACACTAACGACCAATC...GCTGGTGCCAGGAAGAAGGAGCTGCTGGAGAGACTCGCGCAGCAACAGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCAGGGTCATCATCATCCTaGGGGTCTCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: PAACSVTLKHTANATLESGSSSS*GSLAGE
Trigger: CTCCCCAGCTAGAGACCCCAAGGATGATGATGACCC...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGGGCTGTTGCTGAGGTaGCTGAGGCTGAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRGLLLR*LRLRLM
Trigger: CATCAGCCTCAGCCTCAGCAACCTCAGCAACAGCCC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGCAAATTGCTGTTCCTaGGCGCAGTGGGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPANCCS*AQWAAF
Trigger: AAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATTGCCTCTTCTTTAGGTaGAGCCACAGGGCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNCLFFR*SHRASW
Trigger: CCAGCTAGCCCTGTGGCTCAACCTAAAGAAGAGGCA...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CGGCTGTCCTGGGCCTGGCAGGAACGGCTGTCTAGGAGGAATGAAGGGCCGTGTTTAAGCGATATAACCTaGTTTCCTCATCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: RLSWAWQERLSRRNEGPCLSDIT*FPHLHQ
Trigger: CTGATGAAGATGAGGAAACAAGGTTATATCGCTTAA...ACACGGCCCTTCATTCCTCCTAGACAGCCGTTCCTGCCAGGCCCAGGACAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GACACAGACTCGTCTCATTTGGGGCTGGAAGAAAGCCACCCTCACCCCGCATGCTTGTACAAGAGCCTTTaGAGGGCTGAGAAGACAACT +
Preference number: 5 (lower is better)
Translates to: DTDSSHLGLEESHPHPACLYKSL*RAEKTT
Trigger: AGTTGTCTTCTCAGCCCTCAAAAGGCTCTTGTACAA...GCATGCGGGGTGAGGGTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAACAGACTCGTCTCATTaGGGGCTGGAAGAAAGCCAC +
Preference number: 5 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESTDSSH*GLEESH
Trigger: GTGGCTTTCTTCCAGCCCCAAATGAGACGAGTCTGT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCAGCAAGGCAGGGTGCGGGTGCCTACGGAGGCTGCTGCCTGTCCACAAAACAGCCACATAATCAGCTATaGGTTTACCTTATGAGATAC +
Preference number: 5 (lower is better)
Translates to: PARQGAGAYGGCCLSTKQPHNQL*VYLMRY
Trigger: GTATCTCATAAGGTAAACCAATAGCTGATTATGTGG...CTGTTTTGTGGACAGGCAGCAGCCTCCGTAGGCACCCGCACCCTGCCTTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGTCATCTAAAGGTTCATaGATCTCGATGTCTAACACT +
Preference number: 5 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVSSKGS*ISMSNT
Trigger: AGTGTTAGACATCGAGATCAATGAACCTTTAGATGA...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CTCCTGGGGGTTCTGCGCCGGCCGGCAGCTCCCTTGAAGAAATTCCACAGTGTGTCTTTCCTTTCAGTTTaGAAACGTAATCGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: LLGVLRRPAAPLKKFHSVSFLSV*KRNRPD
Trigger: ATCTGGACGATTACGTTTCAAAACTGAAAGGAAAGA...CACACTGTGGAATTTCTTCAAGGGAGCTGCCGGCCGGCGCAGAACCCCCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTGGTAATTCACGCAAATaGCTGTTCCTTGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPGNSRK*LFLGAV
Trigger: CACTGCGCCAAGGAACAGCAATTTGCGTGAATTACC...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTACAGGGCTAGCTGGCTaGACTTTCACTTCCGTCTTT +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPTGLAG*TFTSVF
Trigger: AAAGACGGAAGTGAAAGTCAAGCCAGCTAGCCCTGT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp GAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACTGAAACCCAAATGTTaGAAGCAGGGCGGGGACGAC +
Preference number: 5 (lower is better)
Translates to: EFYSTINSTHSKVRPLSGLKPKC*KQGGDD
Trigger: GTCGTCCCCGCCCTGCTTCAAACATTTGGGTTTCAG...TCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATATTCCTTGGATGCTTTaGATCCCTGGAGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNIPWML*IPGGTG
Trigger: GCCTGTCCCTCCAGGGATCAAAAGCATCCAAGGAAT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCGTGGGCTGGCTCCTaGAACTTAGCTATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSAWAGS*NLAMAF
Trigger: GAAAGCCATAGCTAAGTTCAAGGAGCCAGCCCACGC...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CAA 90 bp AGTCGATCTGGACTAGCGGCTTTCCGAGTGGTGGTAGTCGGGTGCCTCCGAACCAAAAACTTGGAGTTCTaGGTGGTGACAAGAGAATGT +
Preference number: 5 (lower is better)
Translates to: SRSGLAAFRVVVVGCLRTKNLEF*VVTREC
Trigger: ACATTCTCTTGTCACCACCAAGAACTCCAAGTTTTT...GGTTCGGAGGCACCCGACTACCACCACTCGGAAAGCCGCTAGTCCAGATCGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCGGGCCTGCATGACTTaGCCAATCACCTTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPRACMT*PITFQE
Trigger: TTCTTGAAAGGTGATTGGCAAAGTCATGCAGGCCCG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp AAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCATCCTCTCCTTGTTCTaGTTCATACTCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: KSGHSPDGSRNYLVNLLCILSLF*FILRFL
Trigger: CAGGAATCTGAGTATGAACAAGAACAAGGAGAGGAT...GCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp CGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTCAGTTCATCCTCTCCTaGTTCTTGTTCATACTCAGA +
Preference number: 5 (lower is better)
Translates to: RPLSGRQPQLPSQPSLPTQFILS*FLFILR
Trigger: TCTGAGTATGAACAAGAACAAGGAGAGGATGAACTG...AGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTCGCAGTGGGCTGCATTaGCTGCATGGGCCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPRSGLH*LHGPLA
Trigger: AGCAAGCGGCCCATGCAGCAAATGCAGCCCACTGCG...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACGGCTGAGTCTGACTTaGAGGAACTGTTCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: PAACSVTLKHTANATLESRLSLT*RNCSGL
Trigger: CAGACCAGAACAGTTCCTCAAAGTCAGACTCAGCCG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGCGTGGGCTGGCTCCTaGAACTTAGCTATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRAWAGS*NLAMAF
Trigger: GAAAGCCATAGCTAAGTTCAAGGAGCCAGCCCACGC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCGGGCCTGCATGACTTaGCCAATCACCTTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNRACMT*PITFQE
Trigger: TTCTTGAAAGGTGATTGGCAAAGTCATGCAGGCCCG...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACGATGGTTGTGGGTATaGAGTGAGGTCGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: PAACSVTLKHTANATLESRWLWV*SEVGLC
Trigger: ACACAGTCCGACCTCACTCAATACCCACAACCATCG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAGGCCCAAGAAAAGAAGTAACTaGGCTCCACATAATCAGCTA +
Preference number: 5 (lower is better)
Translates to: HQLQPAVSCQFGSSGIRPKKRSN*APHNQL
Trigger: TAGCTGATTATGTGGAGCCAAGTTACTTCTTTTCTT...GGGCCTGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACAGCTTACACAGTCCTaGCAAAACCAGCTTCCGCCA +
Preference number: 5 (lower is better)
Translates to: PAACSVTLKHTANATLESQLTQS*QNQLPP
Trigger: TGGCGGAAGCTGGTTTTGCAAGGACTGTGTAAGCTG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp ATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACAGTTCATCCTCTCCTaGTTCTTGTTCATACTCAGA +
Preference number: 5 (lower is better)
Translates to: INSTHSKVRPLSGRQPQLQFILS*FLFILR
Trigger: TCTGAGTATGAACAAGAACAAGGAGAGGATGAACTG...TAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGCACTGGCTGCTGTCCTaGCTGATTAAATGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRHWLLS*LIKCWS
Trigger: GGACCAGCATTTAATCAGCAAGGACAGCAGCCAGTG...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCATTACATTCTGAGAAGTaGTATTATGCCGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESLHSEK*YYAGAP
Trigger: AGGGGCTCCGGCATAATACAACTTCTCAGAATGTAA...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTGGTCAGCGTCACCTaGCGGGCAGGCTGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: RMNSTTVALWRICLTYRNLVSVT*RAGCGP
Trigger: GGGACCACAGCCTGCCCGCAAGGTGACGCTGACCAG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GCTGACCTCCTTGTCCTGTGCAATTACATGACTAGGACCTGCCTTCGACAAGCGTTGTACAAGAGCCTTTaGAGGGCTGAGAAGACAACT +
Preference number: 5 (lower is better)
Translates to: ADLLVLCNYMTRTCLRQALYKSL*RAEKTT
Trigger: AGTTGTCTTCTCAGCCCTCAAAAGGCTCTTGTACAA...CGCTTGTCGAAGGCAGGTCCTAGTCATGTAATTGCACAGGACAAGGAGGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp AATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCTACCTCCCTCTTCAGTaGCAGGAGCAACCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: NEFYSTINSTHSKVRPLSYLPLQ*QEQPGH
Trigger: ATGCCCAGGTTGCTCCTGCAACTGAAGAGGGAGGTA...GGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp AGCTACCATCCCCATGCCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAATATAAACCGGTCTaGTCCAGAATTCGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: SYHPHATFSRPARNHSMYKYKPV*SRIRPD
Trigger: GTCAGGGCGAATTCTGGACAAGACCGGTTTATATTT...GTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGGCATGGGGATGGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp AAAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGGATTGGTCGTTAGTGTaGTCAGAGAGTTCAAATGAT +
Preference number: 5 (lower is better)
Translates to: KVRPLSGRQPQLPSQPSLDWSLV*SESSND
Trigger: ATCATTTGAACTCTCTGACAACACTAACGACCAATC...CAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCACAGTTCATCCTCTCCTaGTTCTTGTTCATACTCAGA +
Preference number: 5 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESQFILS*FLFILR
Trigger: TCTGAGTATGAACAAGAACAAGGAGAGGATGAACTG...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CCGCTTGCTTACATTCTGAGAAGTTGTATTATGCCGGAGCCCCTGGCGCTGGGGTCATCTAAAGGTTCATaGATCTCGATGTCTAACACT +
Preference number: 5 (lower is better)
Translates to: PLAYILRSCIMPEPLALGSSKGS*ISMSNT
Trigger: AGTGTTAGACATCGAGATCAATGAACCTTTAGATGA...CCCCAGCGCCAGGGGCTCCGGCATAATACAACTTCTCAGAATGTAAGCAAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AAGTCCGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCTCTTTCCTTTCAGTTTaGAAACGTAATCGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: KSGHSPDGSRNYLVNLLCSFLSV*KRNRPD
Trigger: ATCTGGACGATTACGTTTCAAAACTGAAAGGAAAGA...GCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TTCACTTGTGCTGAGGGCGTGGCAGAGCAGCGGCTGCTGCTCATTTCTATCACGTCTTTCCTTTCAGTTTaGAAACGTAATCGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: FTCAEGVAEQRLLLISITSFLSV*KRNRPD
Trigger: ATCTGGACGATTACGTTTCAAAACTGAAAGGAAAGA...CGTGATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGCACAAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CGGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTCTTTCCTTTCAGTTTaGAAACGTAATCGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: RPLSGRQPQLPSQPSLPTSFLSV*KRNRPD
Trigger: ATCTGGACGATTACGTTTCAAAACTGAAAGGAAAGA...AGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGTTGATGTGTATGTTCTaGGGCTGCTGTGGAGTCACG +
Preference number: 5 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRLMCMF*GCCGVT
Trigger: CGTGACTCCACAGCAGCCCAAGAACATACACATCAA...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTGATGGCTCGGGAATCTaGGTTCACCTGAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSDGSGI*VHLKLL
Trigger: TAGGAGTTTCAGGTGAACCAAGATTCCCGAGCCATC...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGTACAGCTGCTGCTGTaGCTGCGCGAGTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIVQLLL*LRESLQ
Trigger: CTGGAGAGACTCGCGCAGCAACAGCAGCAGCTGTAC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCAACTCGAGTTAAGCTaGGTTGAGAAGACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPQLELS*VEKTLL
Trigger: TAGAAGAGTCTTCTCAACCAAGCTTAACTCGAGTTG...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GCCACCTTTTCAAGACCAGCCAGGAACCACAGCATGTACAAGAGCAGCTGTAGGGATTGGTCGTTAGTGTaGTCAGAGAGTTCAAATGAT +
Preference number: 5 (lower is better)
Translates to: ATFSRPARNHSMYKSSCRDWSLV*SESSND
Trigger: ATCATTTGAACTCTCTGACAACACTAACGACCAATC...CCTACAGCTGCTCTTGTACATGCTGTGGTTCCTGGCTGGTCTTGAAAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp GGCCACTCTCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTTCATCTAAAGGTTCATaGATCTCGATGTCTAACACT +
Preference number: 5 (lower is better)
Translates to: GHSPDGSRNYLVNLLCLLSSKGS*ISMSNT
Trigger: AGTGTTAGACATCGAGATCAATGAACCTTTAGATGA...AAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGAGAGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTGGAGCTGTAGCGTCCTaGTTTATGCTGTCGCTCCCT +
Preference number: 5 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPGAVAS*FMLSLP
Trigger: AGGGAGCGACAGCATAAACAAGGACGCTACAGCTCC...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGGGTCATCATCATCCTaGGGGTCTCTAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIGSSSS*GSLAGE
Trigger: CTCCCCAGCTAGAGACCCCAAGGATGATGATGACCC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp TCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATCAAACAAAACGAAAAACTaGGAGTTCTTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: SNTNSSLLCPVSSAPLESNKTKN*EFLVVT
Trigger: TGTCACCACCAAGAACTCCAAGTTTTTCGTTTTGTT...TGATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTAGCTTCAACAACTGTTaGCCTGAGACCTTTACAAAT +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPSFNNC*PETFTN
Trigger: ATTTGTAAAGGTCTCAGGCAAACAGTTGTTGAAGCT...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CATCTTCTTCCCTCCATGCAAAGACTCTTTTCAAAACTGTCTACTGCAGGAATAGTGACCACCGTCCCTTaGAAGTGCGGGTTGATGTGT +
Preference number: 5 (lower is better)
Translates to: HLLPSMQRLFSKLSTAGIVTTVP*KCGLMC
Trigger: ACACATCAACCCGCACTTCAAAGGGACGGTGGTCAC...TATTCCTGCAGTAGACAGTTTTGAAAAGAGTCTTTGCATGGAGGGAAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp GTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTTTAAGCGATATAACCTaGTTTCCTCATCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: VKQSNTNSSLLCPVSSAPLSDIT*FPHLHQ
Trigger: CTGATGAAGATGAGGAAACAAGGTTATATCGCTTAA...AGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGGCTCCTCTGGAATAACAAAACGAAAAACTaGGAGTTCTTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: NLTPTPACCVLSVRLLWNNKTKN*EFLVVT
Trigger: TGTCACCACCAAGAACTCCAAGTTTTTCGTTTTGTT...ATTCCAGAGGAGCCGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CAA 90 bp CCTGCAGCGTGCAGTGTTACTCTCAAGCACACAGCAAACGCCACTTTAGAATCACAACTCGAGTTAAGCTaGGTTGAGAAGACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: PAACSVTLKHTANATLESQLELS*VEKTLL
Trigger: TAGAAGAGTCTTCTCAACCAAGCTTAACTCGAGTTG...TGATTCTAAAGTGGCGTTTGCTGTGTGCTTGAGAGTAACACTGCACGCTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp TTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGACGGTCATCTAAAGGTTCATaGATCTCGATGTCTAACACT +
Preference number: 5 (lower is better)
Translates to: FYSTINSTHSKVRPLSGRSSKGS*ISMSNT
Trigger: AGTGTTAGACATCGAGATCAATGAACCTTTAGATGA...CCGTCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp GAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTTCGAAAAACTTGGAGTTCTaGGTGGTGACAAGAGAATGT +
Preference number: 5 (lower is better)
Translates to: ENVKQSNTNSSLLCPVSSKNLEF*VVTREC
Trigger: ACATTCTCTTGTCACCACCAAGAACTCCAAGTTTTT...CGAACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CAA 90 bp ATCACTGCTACAGAAAGGATCGCAGGGTCTGGAAGACCTGCTTCAGCTCTTCAGCCACATAATCAGCTATaGGTTTACCTTATGAGATAC +
Preference number: 5 (lower is better)
Translates to: ITATERIAGSGRPASALQPHNQL*VYLMRY
Trigger: GTATCTCATAAGGTAAACCAATAGCTGATTATGTGG...CTGAAGAGCTGAAGCAGGTCTTCCAGACCCTGCGATCCTTTCTGTAGCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACGGGACGCCGGCATCTTaGAATCGCCACTCACTCCTA +
Preference number: 5 (lower is better)
Translates to: RMNSTTVALWRICLTYRNGTPAS*NRHSLL
Trigger: TAGGAGTGAGTGGCGATTCAAAGATGCCGGCGTCCC...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp GAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTCCGGATTCACACAGCAAGCTTaGCTCAGAGTGATTATTTCT +
Preference number: 5 (lower is better)
Translates to: EFYSTINSTHSKVRPLSGFTQQA*LRVIIS
Trigger: AGAAATAATCACTCTGAGCAAAGCTTGCTGTGTGAA...TCCGGAGAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp TTCCGCTTTAGTTCCAGTACACAAACCACGGGCTTATGCACCTCAGAAGTTAGGGATTGGTCGTTAGTGTaGTCAGAGAGTTCAAATGAT +
Preference number: 5 (lower is better)
Translates to: FRFSSSTQTTGLCTSEVRDWSLV*SESSND
Trigger: ATCATTTGAACTCTCTGACAACACTAACGACCAATC...CCTAACTTCTGAGGTGCATAAGCCCGTGGTTTGTGTACTGGAACTAAAGCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS-3UTR CAA 90 bp AAGAATGAGTTTTACAGTACCATAAACAGCACTCACTCCAAAGTCCGGCCACTCTTCCTGTTCTCCAGATaGGTCGTTAGTGTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: KNEFYSTINSTHSKVRPLFLFSR*VVSVVR
Trigger: TCTGACAACACTAACGACCAATCTGGAGAACAGGAA...GAGTGGCCGGACTTTGGAGTGAGTGCTGTTTATGGTACTGTAAAACTCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCGCAAATTGCTGTTCCTaGGCGCAGTGGGCTGCATTT +
Preference number: 5 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPANCCS*AQWAAF
Trigger: AAATGCAGCCCACTGCGCCAAGGAACAGCAATTTGC...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCGCCGGGTGAATTCCTaGGATGCTTTTGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: RMNSTTVALWRICLTYRNRRVNS*DAFDPW
Trigger: CCAGGGATCAAAAGCATCCAAGGAATTCACCCGGCG...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS-3UTR CAA 90 bp CAAGAGAATGTGAAGCAATCTAACACCAACTCCAGCCTGCTGTGTCCTGTCAGTAAAAACTTGGAGTTCTaGGTGGTGACAAGAGAATGT +
Preference number: 5 (lower is better)
Translates to: QENVKQSNTNSSLLCPVSKNLEF*VVTREC
Trigger: ACATTCTCTTGTCACCACCAAGAACTCCAAGTTTTT...ACTGACAGGACACAGCAGGCTGGAGTTGGTGTTAGATTGCTTCACATTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000401878.8
CDS-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCCTTTGAAGTGCGGGTaGATGTGTATGTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPPLKCG*MCMFLG
Trigger: GCCCAAGAACATACACATCAACCCGCACTTCAAAGG...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp TGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCCACCTTTACATTCTGAGAAGTaGTATTATGCCGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: CDTQTQRGSHKTCQLTPPLHSEK*YYAGAP
Trigger: AGGGGCTCCGGCATAATACAACTTCTCAGAATGTAA...AGGTGGGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATGCCTCTTCTTTAGGTaGAGCCACAGGGCTAGCTGG +
Preference number: 5 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGCLFFR*SHRASW
Trigger: CCAGCTAGCCCTGTGGCTCAACCTAAAGAAGAGGCA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS CCA 90 bp AAGCCATCGCTCTCTCCTCCCTGCACAACTAATAAGACTATATGGTaGGATAAAGAAGCAAGTGTTCTACAGATCACTTCTTTATGGAAG +
Preference number: 5 (lower is better)
Translates to: KPSLSPPCTTNKTIW*DKEASVLQITSLWK
Trigger: CTTCCATAAAGAAGTGATCTGTAGAACACTTGCTTCTTTATCCCACCATATAGTCTTATTAGTTGTGCAGGGAGGAGAGAGCGATGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438356.1
CDS-3UTR CAA 90 bp TTCTGTTCTTCTATCTTTAAGCGATATAACCTTGTTTCCTCATCTTCATCAGGATTGATGTGTATGTTCTaGGGCTGCTGTGGAGTCACG +
Preference number: 5 (lower is better)
Translates to: FCSSIFKRYNLVSSSSSGLMCMF*GCCGVT
Trigger: CGTGACTCCACAGCAGCCCAAGAACATACACATCAA...TCCTGATGAAGATGAGGAAACAAGGTTATATCGCTTAAAGATAGAAGAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACCTACCCTTTCATCTGTTGTCCTaGATACTGCATGTTGGCACT +
Preference number: 5 (lower is better)
Translates to: NSTTVALWRICLTYRNLPFHLLS*ILHVGT
Trigger: AGTGCCAACATGCAGTATCAAGGACAACAGATGAAA...GGGTAGGTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CCA 90 bp AAAAAGCCATCGCTCTCTCCTCCCACAACTAATAAGACTATATGGTaGGATAAAGAAGCAAGTGTTCTACAGATCACTTCTTTATGGAAG +
Preference number: 5 (lower is better)
Translates to: KKPSLSPPTTNKTIW*DKEASVLQITSLWK
Trigger: CTTCCATAAAGAAGTGATCTGTAGAACACTTGCTTCTTTATCCCACCATATAGTCTTATTAGTTGTGGGAGGAGAGAGCGATGGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341148.7
CDS-3UTR CAA 90 bp TTCTATGTGATACACAGACTCAAAGAGGCTCTCATAAAACTTGTCAACTTACCCATCCTCTCCTTGTTCTaGTTCATACTCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: FYVIHRLKEALIKLVNLPILSLF*FILRFL
Trigger: CAGGAATCTGAGTATGAACAAGAACAAGGAGAGGAT...GGGTAAGTTGACAAGTTTTATGAGAGCCTCTTTGAGTCTGTGTATCACATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307403.6
CDS-3UTR CAA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACATCCTCTCCTTGTTCTaGTTCATACTCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: RMNSTTVALWRICLTYRNILSLF*FILRFL
Trigger: CAGGAATCTGAGTATGAACAAGAACAAGGAGAGGAT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CCA 90 bp ATATGGTGGGATAAAGAAGCAAGTGTTCTACAGATCACTTCTTTATaGAAGAATCTTCTGCAATGGAAATCTATCTGCAGTGACTGGTTT +
Preference number: 5 (lower is better)
Translates to: IWWDKEASVLQITSL*KNLLQWKSICSDWF
Trigger: AAACCAGTCACTGCAGATAGATTTCCATTGCAGAAGATTCTTCCATAAAGAAGTGATCTGTAGAACACTTGCTTCTTTATCCCACCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438356.1
CDS-3UTR CAA 90 bp GATATAGCTATGAAGACACTAAAAGGTACAAAATATAAACCGGTCTTGTCCAGAATCCTCTCCTTGTTCTaGTTCATACTCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: DIAMKTLKGTKYKPVLSRILSLF*FILRFL
Trigger: CAGGAATCTGAGTATGAACAAGAACAAGGAGAGGAT...TCTGGACAAGACCGGTTTATATTTTGTACCTTTTAGTGTCTTCATAGCTATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS-3UTR CAA 90 bp AGAATGAATTCTACTACAGTAGCTTTATGGAGAATATGTCTCACCTACAGGAACAAGAAAAGAAGTAACTaGGCTCCACATAATCAGCTA +
Preference number: 5 (lower is better)
Translates to: RMNSTTVALWRICLTYRNKKRSN*APHNQL
Trigger: TAGCTGATTATGTGGAGCCAAGTTACTTCTTTTCTT...GTTCCTGTAGGTGAGACATATTCTCCATAAAGCTACTGTAGTAGAATTCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341148.7
ENST00000401878.8
CDS GCA 72 bp GCCCTGAGGCCGCCGCCGTGTTTCGGGCGGTGGGCGTaGAACGCAAACACGCGGCAGTCACCTCCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: ALRPPPCFGRWA*NANTRQSPPPG
Trigger: GCCGGGCGGAGGTGACTGCCGCGTGTTTGCGTTGCACGCCCACCGCCCGAAACACGGCGGCGGCCTCAGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS GCA 72 bp TCAGCCTCCCCCACCAAGCCAGCTGGTGGGCCGACGTaGCTGGTCCGGGCCCGGGTACGGGTGACGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SASPTKPAGGPT*LVRARVRVTED
Trigger: GTCCTCCGTCACCCGTACCCGGGCCCGGACCAGGCACGTCGGCCCACCAGCTGGCTTGGTGGGGGAGGCTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287912.7
ENST00000392759.7
ENST00000401878.8
CDS CCA 72 bp GCAGCAGCCCTGAGGCCGCCGCCGTGTTTCGGGCGGTaGGCGTGCAACGCAAACACGCGGCAGTCACCTCCG +
Preference number: 6 (lower is better)
Translates to: AAALRPPPCFGR*ACNANTRQSPP
Trigger: CGGAGGTGACTGCCGCGTGTTTGCGTTGCACGCCCACCGCCCGAAACACGGCGGCGGCCTCAGGGCTGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS CAA 90 bp CGCAGGGCTGGGGCTTGCACTCCACCACCCGCAGGTTCTGCTTGTTaGGCATCAGGCGCCCCCGGCCCATGGGACCGGCCACTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: RRAGACTPPPAGSAC*ASGAPGPWDRPLLC
Trigger: GCAGAGGAGTGGCCGGTCCCATGGGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CCA 72 bp GCCTCCGCAGGAAGAAAACAACAAACTACCGCAACATaGCCGCGCGCCCGCGCCCGCCGCGGTGCACCCTGG +
Preference number: 6 (lower is better)
Translates to: ASAGRKQQTTAT*PRARARRGAPW
Trigger: CCAGGGTGCACCGCGGCGGGCGCGGGCGCGCGGCCATGTTGCGGTAGTTTGTTGTTTTCTTCCTGCGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287912.7
CDS CCA 72 bp GGGCTTGCACTCCACCACCCGCAGGTTCTGCTTGTTTaGCATCAGGCGCCCCCGGCCCATGGGACCGGCCAC +
Preference number: 6 (lower is better)
Translates to: GLALHHPQVLLV*HQAPPAHGTGH
Trigger: GTGGCCGGTCCCATGGGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CAA 72 bp GGGGCTTGCACTCCACCACCCGCAGGTTCTGCTTGTTaGGCATCAGGCGCCCCCGGCCCATGGGACCGGCCA +
Preference number: 6 (lower is better)
Translates to: GACTPPPAGSAC*ASGAPGPWDRP
Trigger: TGGCCGGTCCCATGGGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CAA 72 bp GGCTGGGGCTTGCACTCCACCACCCGCAGGTTCTGCTaGTTTGGCATCAGGCGCCCCCGGCCCATGGGACCG +
Preference number: 6 (lower is better)
Translates to: GWGLHSTTRRFC*FGIRRPRPMGP
Trigger: CGGTCCCATGGGCCGGGGGCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CCA 72 bp GACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTaGGGCTTGCACTCCACCACCCGCAGGTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: DEDSPSTDTTQG*GLHSTTRRFCL
Trigger: CAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CAA 90 bp GTGGACGAGGACAGCCCCTCCACAGACACCACGCAGGGCTGGGGCTaGCACTCCACCACCCGCAGGTTCTGCTTGTTTGGCATCAGGCGC +
Preference number: 6 (lower is better)
Translates to: VDEDSPSTDTTQGWG*HSTTRRFCLFGIRR
Trigger: GCGCCTGATGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CAA 72 bp GACAGCCCCTCCACAGACACCACGCAGGGCTGGGGCTaGCACTCCACCACCCGCAGGTTCTGCTTGTTTGGC +
Preference number: 6 (lower is better)
Translates to: DSPSTDTTQGWG*HSTTRRFCLFG
Trigger: GCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS GCA 72 bp ACAGCCCCTCCACAGACACCACGCAGGGCTGGGGCTTaGACTCCACCACCCGCAGGTTCTGCTTGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: TAPPQTPRRAGA*TPPPAGSACLA
Trigger: TGCCAAACAAGCAGAACCTGCGGGTGGTGGAGTGCAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
CDS CCA 72 bp GACACATCAGCGGACCTCCTCGCCGTCCTCCCCGCCTaGAGCTGTAGCGTCCTTGTTTATGCTGTCGCTCCC +
Preference number: 6 (lower is better)
Translates to: DTSADLLAVLPA*SCSVLVYAVAP
Trigger: GGGAGCGACAGCATAAACAAGGACGCTACAGCTCCAGGCGGGGAGGACGGCGAGGAGGTCCGCTGATGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307403.6
ENST00000392761.3
ENST00000401878.8
ENST00000440108.5
ENST00000486747.1
CDS CCA 72 bp GGCAGAGGCGAAGCCGGGCGCTTCGCGGTCCACAGCTaGCCCTTCGCCTCCGCAGGAAGAAAACAACAAACT +
Preference number: 6 (lower is better)
Translates to: GRGEAGRFAVHS*PFASAGRKQQT
Trigger: AGTTTGTTGTTTTCTTCCTGCGGAGGCGAAGGGCCAGCTGTGGACCGCGAAGCGCCCGGCTTCGCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000401878.8
CDS CCA 72 bp CCACTGACATCAGCAGGCTCTTCAGCTGGGCATCCGTaGTGGACGAGGACAGCCCCTCCACAGACACCACGC +
Preference number: 6 (lower is better)
Translates to: PLTSAGSSAGHP*WTRTAPPQTPR
Trigger: GCGTGGTGTCTGTGGAGGGGCTGTCCTCGTCCACCACGGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341148.7
ENST00000392755.2
ENST00000392761.3
ENST00000401878.8
CDS CCA 72 bp AGGTTGCTGAGGCTGAGGCTGATGCGGAGGGGGCAATaGAGGATGCAACGGCCCCTGCAGGTTGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: RLLRLRLMRRGQ*RMQRPLQVGLC
Trigger: ACACAGCCCAACCTGCAGGGGCCGTTGCATCCTCCATTGCCCCCTCCGCATCAGCCTCAGCCTCAGCAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392761.3
ENST00000401878.8
CDS TCA 72 bp ATGCCACCCCCAGGCGGCTACCTGAATGGGTCCCACTaGCATCAGCAGGCTCTTCAGCTGGGCATCCGTGGT +
Preference number: 6 (lower is better)
Translates to: MPPPGGYLNGSH*HQQALQLGIRG
Trigger: ACCACGGATGCCCAGCTGAAGAGCCTGCTGATGTCAGTGGGACCCATTCAGGTAGCCGCCTGGGGGTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS CCA 72 bp TCCTTCATCCTGCCCCTCTCGGTGCTCTCTCTCCTCTaGTCCCCCACACCACGACACATCAGCGGACCTCCT +
Preference number: 6 (lower is better)
Translates to: SFILPLSVLSLL*SPTPRHISGPP
Trigger: AGGAGGTCCGCTGATGTGTCGTGGTGTGGGGGACCAGAGGAGAGAGAGCACCGAGAGGGGCAGGATGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307403.6
ENST00000392761.3
ENST00000401878.8
ENST00000440108.5
ENST00000486747.1
CDS CAA 72 bp CCTCCCTGCCCACCTGACAGCTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCGTCTCCACCACCACTG +
Preference number: 6 (lower is better)
Translates to: PPCPPDSLITLT*ELMWGPSPPPL
Trigger: CAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGCAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS CCA 72 bp ACGACAGGAGGCTGTGTAGGAAGCAGCGCAGGTCTGTaGTCCTTCATCCTGCCCCTCTCGGTGCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: TTGGCVGSSAGL*SFILPLSVLSL
Trigger: GAGAGAGAGCACCGAGAGGGGCAGGATGAAGGACCACAGACCTGCGCTGCTTCCTACACAGCCTCCTGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307403.6
ENST00000392761.3
ENST00000401878.8
ENST00000440108.5
ENST00000486747.1
CDS CAA 72 bp TCTCCTCCCCCACCTGACAGCTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCGTCTCCACCACCACTG +
Preference number: 6 (lower is better)
Translates to: SPPPPDSLITLT*ELMWGPSPPPL
Trigger: CAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CAA 90 bp CCATCGCTCTCTCCTCCCCCACCTGACAGCTTAATCACCCTGACCTaGGAGCTGATGTGGGGCCCGTCTCCACCACCACTGTTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: PSLSPPPPDSLITLT*ELMWGPSPPPLFVL
Trigger: CAGGACAAACAGTGGTGGTGGAGACGGGCCCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGGAGGAGAGAGCGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401878.8
CDS CCA 72 bp CTTCTCCACGACCGTTCCGCGCCAGGCTTATCAAACTaGTCAAAGTCATCATCTCCGGCGCCTGCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: LLHDRSAPGLSN*SKSSSPAPAPP
Trigger: CGGAGGAGCAGGCGCCGGAGATGATGACTTTGACCAGTTTGATAAGCCTGGCGCGGAACGGTCGTGGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287912.7
ENST00000392759.7
ENST00000401878.8
CDS CAA 90 bp CAGCGGACCTCCTCGCCGTCCTCCCCGCCTGGAGCTGTAGCGTCCTaGTTTATGCTGTCGCTCCCTTTCTTCAAATTCAAGCAATGCTGC +
Preference number: 6 (lower is better)
Translates to: QRTSSPSSPPGAVAS*FMLSLPFFKFKQCC
Trigger: GCAGCATTGCTTGAATTTGAAGAAAGGGAGCGACAGCATAAACAAGGACGCTACAGCTCCAGGCGGGGAGGACGGCGAGGAGGTCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307403.6
ENST00000392761.3
ENST00000401878.8
ENST00000440108.5
ENST00000486747.1
CDS TCA 72 bp TCTGCGCCGGCCGGCAGCTCCCTGTGGAATTTCTGCTaGAATGCTAATGCGTGGGCTGGCTCCTTGAACTTA +
Preference number: 6 (lower is better)
Translates to: SAPAGSSLWNFC*NANAWAGSLNL
Trigger: TAAGTTCAAGGAGCCAGCCCACGCATTAGCATTTCAGCAGAAATTCCACAGGGAGCTGCCGGCCGGCGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392755.2
CDS TCA 72 bp GGAGCCTGGGGCTGTGGAGGAATTAACCTTGGAGAATaGGTCACGACAGGAGGCTGTGTAGGAAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: GAWGCGGINLGE*VTTGGCVGSSA
Trigger: TGCGCTGCTTCCTACACAGCCTCCTGTCGTGACTCATTCTCCAAGGTTAATTCCTCCACAGCCCCAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440108.5
CDS CAA 72 bp TCCGTGCATGATGGCCTTCTTCGCCGGGTGAATTCCTaGGATGCTTTTGATCCCTGGAGGGACAGGCGAGTG +
Preference number: 6 (lower is better)
Translates to: SVHDGLLRRVNS*DAFDPWRDRRV
Trigger: CACTCGCCTGTCCCTCCAGGGATCAAAAGCATCCAAGGAATTCACCCGGCGAAGAAGGCCATCATGCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341148.7
ENST00000392761.3
ENST00000401878.8
ENST00000438356.1
CDS CAA 72 bp TTCAGCCACACAGTCTTCCTGCTCTTGCAGCCCTTGTaGCCCACCATAAGCCTGCAAGTATTCTTCATCTGT +
Preference number: 6 (lower is better)
Translates to: FSHTVFLLLQPL*PTISLQVFFIC
Trigger: ACAGATGAAGAATACTTGCAGGCTTATGGTGGGCAACAAGGGCTGCAAGAGCAGGAAGACTGTGTGGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS CAA 72 bp ATCTTCAGCCACACAGTCTTCCTGCTCTTGCAGCCCTaGTTGCCCACCATAAGCCTGCAAGTATTCTTCATC +
Preference number: 6 (lower is better)
Translates to: IFSHTVFLLLQP*LPTISLQVFFI
Trigger: GATGAAGAATACTTGCAGGCTTATGGTGGGCAACAAGGGCTGCAAGAGCAGGAAGACTGTGTGGCTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS CCA 72 bp GTTTCCATACCTCCCTCTTCAGTTGCAGGAGCAACCTaGGCATCAGTAATCTCATCTAATTCATCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: VSIPPSSVAGAT*ASVISSNSSSA
Trigger: GGCTGAAGATGAATTAGATGAGATTACTGATGCCCAGGTTGCTCCTGCAACTGAAGAGGGAGGTATGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392759.7
CDS CAA 72 bp AGGGCACTGTGTTTTAAATCAAGAAATGATTTTGTCTaGGGACACAACTACCCGTGGCACAGATGCCACCCC +
Preference number: 6 (lower is better)
Translates to: RALCFKSRNDFV*GHNYPWHRCHP
Trigger: GGGGTGGCATCTGTGCCACGGGTAGTTGTGTCCCAAGACAAAATCATTTCTTGATTTAAAACACAGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392761.3
CDS GCA 72 bp ACCTATCCAAACTACAGTGGAAAACTGCACTTCCTGTaGCTGACTGAAAATGACCTGATATGGACAATGATG +
Preference number: 6 (lower is better)
Translates to: TYPNYSGKLHFL*LTENDLIWTMM
Trigger: CATCATTGTCCATATCAGGTCATTTTCAGTCAGGCACAGGAAGTGCAGTTTTCCACTGTAGTTTGGATAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438356.1
CDS CAA 90 bp TCCGGACGGCAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTaGATTAATTACAGCAATACTATGGAGGAAGTTGAAATGAGAGTA +
Preference number: 6 (lower is better)
Translates to: SGRQPQLPSQPSLPT*INYSNTMEEVEMRV
Trigger: TACTCTCATTTCAACTTCCTCCATAGTATTGCTGTAATTAATCAAAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTGCCGTCCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7
CDS CAA 72 bp AGATTTGTGATAAACCAGTTCATCCTCTCCTTGTTCTaGTTCATACTCAGATTCCTGTTCTCCAGATTGGTC +
Preference number: 6 (lower is better)
Translates to: RFVINQFILSLF*FILRFLFSRLV
Trigger: GACCAATCTGGAGAACAGGAATCTGAGTATGAACAAGAACAAGGAGAGGATGAACTGGTTTATCACAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287912.7
ENST00000307403.6
ENST00000392759.7
ENST00000401878.8
CDS CCA 72 bp TGTTCTTGTTCATACTCAGATTCCTGTTCTCCAGATTaGTCGTTAGTGTTGTCAGAGAGTTCAAATGATGTA +
Preference number: 6 (lower is better)
Translates to: CSCSYSDSCSPD*SLVLSESSNDV
Trigger: TACATCATTTGAACTCTCTGACAACACTAACGACCAATCTGGAGAACAGGAATCTGAGTATGAACAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287912.7
ENST00000307403.6
ENST00000392759.7
ENST00000401878.8
CDS CAA 72 bp CAGCCGCAATTACCTAGTCAACCTTCTTTGCCTACTTaGATTAATTACAGCAATACTATGGAGGAAGTTGAA +
Preference number: 6 (lower is better)
Translates to: QPQLPSQPSLPT*INYSNTMEEVE
Trigger: TTCAACTTCCTCCATAGTATTGCTGTAATTAATCAAAGTAGGCAAAGAAGGTTGACTAGGTAATTGCGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287912.7
ENST00000392759.7