RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM27 (Homo sapiens)

Ensembl gene IDs: ENSG00000091009

Ensembl transcript IDs: ENST00000265271.7, ENST00000508019.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTaGCCAAATGAACCACTTATATCAATGATGACTAAGTCAGGCCTA +
Preference number: 1 (lower is better)
Translates to: YPGAGLNLLLETACG*PNEPLISMMTKSGL
Trigger: TAGGCCTGACTTAGTCATCATTGATATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR GCA 90 bp CTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTaGGGTTGCCCAAATGAACCACTTATATCAATGATGACTAAGTCA +
Preference number: 1 (lower is better)
Translates to: LIYPGAGLNLLLETA*GCPNEPLISMMTKS
Trigger: TGACTTAGTCATCATTGATATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR GCA 90 bp AAATCCTTCCATCATTCTCATCAAAACATCACTTATTTATCCAGGTaGTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCAAA +
Preference number: 1 (lower is better)
Translates to: KSFHHSHQNITYLSR*WFEPFIGDCLRLPK
Trigger: TTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGTGATGTTTTGATGAGAATGATGGAAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CCA 90 bp TTGGACAGTGATCCACTAGTATATCAGGCTGACCTAGTCAACTGGTaGCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACAT +
Preference number: 1 (lower is better)
Translates to: LDSDPLVYQADLVNW*LLLLISYLKRCHTH
Trigger: ATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTTGACTAGGTCAGCCTGATATACTAGTGGATCACTGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CCA 90 bp ATCTTGGACAGTGATCCACTAGTATATCAGGCTGACCTAGTCAACTaGTGGCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACA +
Preference number: 1 (lower is better)
Translates to: ILDSDPLVYQADLVN*WLLLLISYLKRCHT
Trigger: TGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTTGACTAGGTCAGCCTGATATACTAGTGGATCACTGTCCAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR TCA 90 bp GTTTCTATATTGAGAAATTGTCTTTACCTCAGCAAACAAAATCCTTaGTATAGTGGTCACCAAGACCCTTTTGGAGACAACAGGAGGTTT +
Preference number: 1 (lower is better)
Translates to: VSILRNCLYLSKQNP*YSGHQDPFGDNRRF
Trigger: AAACCTCCTGTTGTCTCCAAAAGGGTCTTGGTGACCACTATATCAAGGATTTTGTTTGCTGAGGTAAAGACAATTTCTCAATATAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCATCCATAACAACTaGGAGTTAAAAGATTACAGG +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPIHNN*ELKDYR
Trigger: CCTGTAATCTTTTAACTCTCAGTTGTTATGGATGGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGTCCAGGAGTTCATATaGCAAGAGAATGGAAATACT +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLVQEFI*QENGNT
Trigger: AGTATTTCCATTCTCTTGTCATATGAACTCCTGGAC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTCCAAGACCACTCTTaGAAGCAAAAGGGTATTTTA +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLFQDHS*KQKGIL
Trigger: TAAAATACCCTTTTGCTTTCAAGAGTGGTCTTGGAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGTTGTGATTTTCACTaGACTAGTACTACCACACAT +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLCCDFH*TSTTTH
Trigger: ATGTGTGGTAGTACTAGTTCAGTGAAAATCACAACA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTCACTAGGCCTTTGGTaGTTTAATATCATGTACAGT +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLSLGLW*FNIMYS
Trigger: ACTGTACATGATATTAAAGCACCAAAGGCCTAGTGA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAGTCACTAGGCCTTTaGTGCTTTAATATCATGTAC +
Preference number: 2 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKSLGL*CFNIMY
Trigger: GTACATGATATTAAAGCACCAAAGGCCTAGTGACTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CAA 90 bp ATCAAAACATCACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATaGGAGACTGCCTGCGGTTGCCCAAATGAACCACTTATATCAATG +
Preference number: 2 (lower is better)
Translates to: IKTSLIYPGAGLNLL*ETACGCPNEPLISM
Trigger: CATTGATATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGTGATGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGAGACTGCCTGCGGTTaGCCAAATGAACCACTTATA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTETACG*PNEPLI
Trigger: TATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAATCCAGGTGCTGGTTTaGACCTTTTATTGGAGACTG +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTIQVLV*TFYWRL
Trigger: CAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGAT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTGTCTACTGAGGGATaGGTATGTTCATGGATAGCA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLSTEG*VCSWIA
Trigger: TGCTATCCATGAACATACGCATCCCTCAGTAGACAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTGCGGTTGCCCAAATaGACCACTTATATCAATGAT +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLRLPK*TTYIND
Trigger: ATCATTGATATAAGTGGTTCATTTGGGCAACCGCAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACAAACTTGCTGTTCTTaGACCTACTGTGTTGAAAAG +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTQTCCS*TYCVEK
Trigger: CTTTTCAACACAGTAGGTTCAAGAACAGCAAGTTTG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGATGTGTATATCCTTaGAAAAGTGACAGCCTAGGT +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRCVYP*KSDSLG
Trigger: ACCTAGGCTGTCACTTTTTCAAGGATATACACATCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAAAATGACCCTGGTTTaGCACATCATTCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTKMTLV*HIIPGK
Trigger: TTTTCCTGGAATGATGTGTCAAACCAGGGTCATTTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTGTTTAAGGTGTACTaGAAACTTATAGAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLFKVY*KLIERA
Trigger: GGCCCTTTCTATAAGTTTTCAGTACACCTTAAACAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGATTATCCATGTCATTaGTGTGGATCTTCACAACTG +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTDYPCH*CGSSQL
Trigger: CAGTTGTGAAGATCCACAGCAATGACATGGATAATC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGGATGCGTATGTTCATaGATAGCAACAAGCTACAAA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTGCVCS*IATSYK
Trigger: TTTGTAGCTTGTTGCTATCCATGAACATACGCATCC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACATATGACAAGAGAATaGAAATACTATAGAGCTAGC +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTHMTRE*KYYRAS
Trigger: GCTAGCTCTATAGTATTTCCATTCTCTTGTCATATG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATATTTATCCAGGTGCTaGTTTGAACCTTTTATTGGA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTYLSRC*FEPFIG
Trigger: TCCAATAAAAGGTTCAAACCAGCACCTGGATAAATA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGTCACCTCACCATCATaGTTTAAATTTAGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTVTSPS*FKFRKR
Trigger: TCTTTTCCTAAATTTAAACCATGATGGTGAGGTGAC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR GCA 72 bp CCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTaGGGTTGCCCAAATGAACCACTTATATCAATGATG +
Preference number: 3 (lower is better)
Translates to: PGAGLNLLLETA*GCPNEPLISMM
Trigger: CATCATTGATATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR GCA 72 bp GCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTaGCCAAATGAACCACTTATATCAATGATGACTAAG +
Preference number: 3 (lower is better)
Translates to: AGLNLLLETACG*PNEPLISMMTK
Trigger: CTTAGTCATCATTGATATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGTCACCAAGACCCTTTaGGAGACAACAGGAGGTTTC +
Preference number: 3 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTVTKTL*ETTGGF
Trigger: GAAACCTCCTGTTGTCTCCAAAAGGGTCTTGGTGAC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CCA 72 bp GATCCACTAGTATATCAGGCTGACCTAGTCAACTGGTaGCTATTATTGCTGATCAGCTACTTAAAAAGATGT +
Preference number: 3 (lower is better)
Translates to: DPLVYQADLVNW*LLLLISYLKRC
Trigger: ACATCTTTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTTGACTAGGTCAGCCTGATATACTAGTGGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CCA 72 bp AGTGATCCACTAGTATATCAGGCTGACCTAGTCAACTaGTGGCTATTATTGCTGATCAGCTACTTAAAAAGA +
Preference number: 3 (lower is better)
Translates to: SDPLVYQADLVN*WLLLLISYLKR
Trigger: TCTTTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTTGACTAGGTCAGCCTGATATACTAGTGGATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR TCA 72 bp TTGAGAAATTGTCTTTACCTCAGCAAACAAAATCCTTaGTATAGTGGTCACCAAGACCCTTTTGGAGACAAC +
Preference number: 3 (lower is better)
Translates to: LRNCLYLSKQNP*YSGHQDPFGDN
Trigger: GTTGTCTCCAAAAGGGTCTTGGTGACCACTATATCAAGGATTTTGTTTGCTGAGGTAAAGACAATTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGATTATCCATGTCATaGCTGTGGATCTTCACAACT +
Preference number: 3 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRLSMS*LWIFTT
Trigger: AGTTGTGAAGATCCACAGCAATGACATGGATAATCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAAAAATGACCCTGGTTaGACACATCATTCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTKNDPG*THHSRK
Trigger: TTTCCTGGAATGATGTGTCAAACCAGGGTCATTTTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTTCACAGCTCCCGGTaGCCCAGCCCACCGGGCATC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLHSSR*PSPPGI
Trigger: GATGCCCGGTGGGCTGGGGCACCGGGAGCTGTGAAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACTATGGCCAGGACCTaGACCTGGGCCCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTMART*TWARAW
Trigger: CCAGGCCCGGGCCCAGGTCCAGGTCCTGGCCATAGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGCGGTGTCCCCAACTaGAGTCGCTCAGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGGVPN*SRSDAA
Trigger: TGCTGCATCTGAGCGACTTCAGTTGGGGACACCGCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACCTCCGTGCACTGTTaGAGGAGCAGACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTSVHC*RSRLGH
Trigger: GTGGCCCAGTCTGCTCCTTCAACAGTGCACGGAGGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCTCTTCTTCAGGCCTaGCGTGGGTCTCCACTACGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLALLQA*RGSPLR
Trigger: GCGTAGTGGAGACCCACGGCAGGCCTGAAGAAGAGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGATCCCGGTCTTTGCTaGGCCCCCTACTTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLDPGLC*APYFGF
Trigger: GAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTGGATCCCGGTCTTTaGTGCGCCCCCTACTTCGGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLDPGL*CAPYFG
Trigger: GCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGGCACCAAACGAGCTaGCAACAGAGGAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLWHQTS*QQRRRC
Trigger: ACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAACCTGGGCCCGGGCCTaGGCCTGGACCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTTWARA*AWTWHW
Trigger: CCAATGCCAGGTCCAGGCCCAGGCCCGGGCCCAGGT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGTTGAAGGAGCAGACTaGGCCACTAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLVEGAD*ATSTCC
Trigger: GCAGCAGGTGCTAGTGGCCCAGTCTGCTCCTTCAAC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCATCCACATCCTCTATaGGCATGGTGCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLHPHPL*AWCREG
Trigger: GCCTTCCCTGCACCATGCTCATAGAGGATGTGGATG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCAATGGAGGATCCCATaGGGTTTCGAGGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLQWRIP*GFEVAP
Trigger: TGGTGCCACCTCGAAACCTCATGGGATCCTCCATTG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACTAGCACCTGCTGCTaGTGTAGATGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTSTCC*CRCCGR
Trigger: CCTGCCACAGCATCTACATCAGCAGCAGGTGCTAGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGTGGTGTCTTCTCCTaGGGACAGCCTCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLCGVFS*GQPLVE
Trigger: CTCCACAAGAGGCTGTCCTCAGGAGAAGACACCACA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCAGGAGGAGGGGGTaGGAAAGGAATCATACTTGG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPRRRG*ERNHTW
Trigger: CCAAGTATGATTCCTTTCCCACCCCCTCCTCCTGGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGAAGTCTCATACTATaGCCAGGACCTGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGSLIL*PGPGPG
Trigger: CCCAGGTCCAGGTCCTGGCCATAGTATGAGACTTCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGTAGGGCTGGAGACTaGGGTATGGTATCCAATGGA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGRAGD*GMVSNG
Trigger: TCCATTGGATACCATACCTCAGTCTCCAGCCCTACC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCCAAGGTTTCTTTGTaGGTGGCCCTTCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLAKVSL*VALPNH
Trigger: GTGGTTTGGAAGGGCCACTCACAAAGAAACCTTGGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGGTCCACCACCATGTaGTTTAGTGAGCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLWSTTM*FSEPLP
Trigger: AGGAAGGGGCTCACTAAATCACATGGTGGTGGACCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGAAGTCGCTCAGATaGAGCAGCACCATGTTCACG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLKSLR*SSTMFT
Trigger: CGTGAACATGGTGCTGCTGCATCTGAGCGACTTCAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCTTCAGGCCTGCCGTaGGTCTCCACTACGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSSGLP*VSTTPP
Trigger: GGGCGGCGTAGTGGAGACCCACGGCAGGCCTGAAGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCACTTGTCCCAGGCTaGTCACGGCTGTTTATCAAG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLALVPG*SRLFIK
Trigger: CTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCACTGATGCAAGATTaGGCACTGCACTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPLMQD*ALHLSQ
Trigger: CTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCCCCAGAGGAATACTaGTCAGAAGAGTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLAPEEY*SEEFGG
Trigger: ACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAGTGTTTGCTGTTGTTaGAGGAGCAGCTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLSVCCC*RSSCAE
Trigger: CTCAGCACAGCTGCTCCTGCAACAACAGCAAACACT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGGAGACTGAGGTATaGTATCCAATGGAGGATCCC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLETEV*YPMEDP
Trigger: GGGATCCTCCATTGGATACCATACCTCAGTCTCCAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGAGGACAGCCTCTTGTaGAGGTCCAGTTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLEDSLL*RSSSVS
Trigger: AGATACTGAACTGGACCTCCACAAGAGGCTGTCCTC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTCGTTCACTAGATTCTaGACGAGTCTTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLSFTRF*TSLLGT
Trigger: AGTCCCCAGAAGACTCGTTCAGAATCTAGTGAACGA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCATGGGCTGTCGTTCTaGTACTGTGTAAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLHGLSF*YCVKEV
Trigger: AACCTCCTTTACACAGTATCAGAACGACAGCCCATG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGCTGCTGTGAGAGGTaGCTAAGTGTTTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLCCCER*LSVCCC
Trigger: ACAACAGCAAACACTTAGTCACCTCTCACAGCAGCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCAGCACCACCAGACTaGTTCAACAAATGTGATGCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPAPPD*FNKCDA
Trigger: TGCATCACATTTGTTGAATCAGTCTGGTGGTGCTGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGATCTCGTTCTTCCTCTaGTGGCTCCTGAAATACCTC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLISFFL*WLLKYL
Trigger: GAGGTATTTCAGGAGCCAGCAGAGGAAGAACGAGAT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGAGACTGCCTGCGGTTaGCCAAATGAACCACTTATA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLETACG*PNEPLI
Trigger: TATAAGTGGTTCATTTGGGCAACCGCAGGCAGTCTC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTATTGGAGACTGCCTaGGGTTGCCCAAATGAACCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLLETA*GCPNEP
Trigger: TGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGTTCACGAGAGTACATaGGCTGTCGTTCTGATACTG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLVHEST*AVVLIL
Trigger: CAGTATCAGAACGACAGCCCATGTACTCTCGTGAAC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGGTTCATATGTATCTaGAACCAGAGGGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLWFICI*NQRGRA
Trigger: AGCCCTACCCCTCTGGTTCCAGATACATATGAACCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGTGATGCATCACTCTaGTTACCACCTGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLCDASL*LPPACP
Trigger: TGGACATGCAGGTGGTAACCAGAGTGATGCATCACA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAACGGATGGTGGAGGCTaGCCATGTCCTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTTDGGG*PCPWGT
Trigger: TGTTCCCCAAGGACATGGTCAGCCTCCACCATCCGT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTGGGACGCTGTGTCTaGGTTCTTGAAAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLGRCV*VLEKNC
Trigger: ACAGTTCTTTTCAAGAACTCAGACACAGCGTCCCAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCCACAAGACTCGAATaGATCGGTTGTTTAGAACTG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLATRLE*IGCLEL
Trigger: CAGTTCTAAACAACCGATTCATTCGAGTCTTGTGGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGATGCTGTGGCAGGTaGTGGTGCTGCTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRCCGR*WCCCER
Trigger: CCTCTCACAGCAGCACCATCACCTGCCACAGCATCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGGATGGCCTGGAGTTaGAAATATCTGGCAATCTTC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLWMAWS*KYLAIF
Trigger: GAAGATTGCCAGATATTTTCAACTCCAGGCCATCCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGATCCAGGTGCTGGTTTaGACCTTTTATTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLIQVLV*TFYWRL
Trigger: CAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGAT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAGGAAACTGTCTACTaGGGGATGCGTATGTTCATG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKETVY*GMRMFM
Trigger: CATGAACATACGCATCCCTCAGTAGACAGTTTCCTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGTCTACTGAGGGATaGGTATGTTCATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLSTEG*VCSWIA
Trigger: TGCTATCCATGAACATACGCATCCCTCAGTAGACAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGGCTCAGGCTTTACTaGTTCCAAAAGTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLWLRLY*FQKWKV
Trigger: TACCTTCCACTTTTGGAACCAGTAAAGCCTGAGCCA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGGGAAGCACAACGGATaGTGGAGGCTGACCATGTCC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTGKHNG*WRLTMS
Trigger: GGACATGGTCAGCCTCCACCATCCGTTGTGCTTCCC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCGAAACAGGAACTGGTaGTTCAGTCTGGATCACAAT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLRNRNW*FSLDHN
Trigger: ATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAATCGAAACAGGAACTaGTGGTTCAGTCTGGATCAC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLNRNRN*WFSLDH
Trigger: GTGATCCAGACTGAACCACCAGTTCCTGTTTCGATT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CAA 72 bp TCACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATaGGAGACTGCCTGCGGTTGCCCAAATGAACCACTT +
Preference number: 4 (lower is better)
Translates to: SLIYPGAGLNLL*ETACGCPNEPL
Trigger: AAGTGGTTCATTTGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CAA 72 bp CTCATCAAAACATCACTTATTTATCCAGGTGCTGGTTaGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LIKTSLIYPGAG*NLLLETACGCP
Trigger: TGGGCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGTGATGTTTTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTCCTCTGCTGGCTCCTaGAATACCTCTTCTTTAATT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLSSAGS*NTSSLI
Trigger: AATTAAAGAAGAGGTATTTCAGGAGCCAGCAGAGGA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAGAACATATGCACCTaGTGTCTGTGGTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKNICT*CLWFAH
Trigger: ATGAGCAAACCACAGACATCAGGTGCATATGTTCTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGATTCAACAAATGTaGTGCATCACTCTGGTTACC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLIQQM*CITLVT
Trigger: GGTAACCAGAGTGATGCATCACATTTGTTGAATCAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCGGTTGAGAAATGCTaGAGCAAGTCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLAVEKC*SKSSFS
Trigger: AGAAAAAGAAGACTTGCTTCAGCATTTCTCAACCGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGCGGTTGCCCAAATaGACCACTTATATCAATGAT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLRLPK*TTYIND
Trigger: ATCATTGATATAAGTGGTTCATTTGGGCAACCGCAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGACTGTAGTGTCGGTTaGTCATTATTTTCCCTATGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLDCSVG*SLFSLC
Trigger: GCATAGGGAAAATAATGAGCAACCGACACTACAGTC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGATGTCTGTGGTTTaGTCATCATCTTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLMSVV*SSSSGY
Trigger: GTATCCAGAAGATGATGAGCAAACCACAGACATCAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGAGTTGAAAATATCTaGCAATCTTCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGVENI*QSSPAP
Trigger: TGGTGCTGGAGAAGATTGCCAGATATTTTCAACTCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTGTCTTCACTTTAGATaGTGTGGAGACTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLCLHFR*CGDCRR
Trigger: TCTTCTGCAGTCTCCACACCATCTAAAGTGAAGACA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTTTCCGTAATTCTGTaGTGTCTTCTCCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLFSVIL*CLLLRT
Trigger: TGTCCTCAGGAGAAGACACCACAGAATTACGGAAAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCTGTTTATCAAGCTTaGTTGTGTTATAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLAVYQA*LCYRWS
Trigger: AGACCACCTATAACACAATCAAGCTTGATAAACAGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAGAACTGTCTGTACTaGGATCTACCAGAACTAGTA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKNCLY*DLPELV
Trigger: TACTAGTTCTGGTAGATCTCAGTACAGACAGTTCTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACCTCTTCCTCGACCTTaGGAGGACATGGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTPLPRP*EDMVFP
Trigger: AGGAAAGACCATGTCCTCTCAAGGTCGAGGAAGAGG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTTTTTCTTCCTCAATaGATCCTCCAACTGTTAGTG +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLFLPQ*ILQLLV
Trigger: CACTAACAGTTGGAGGATTCATTGAGGAAGAAAAAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAAATGACCCTGGTTTaGCACATCATTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKMTLV*HIIPGK
Trigger: TTTTCCTGGAATGATGTGTCAAACCAGGGTCATTTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTGTTTAAGGTGTACTaGAAACTTATAGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLFKVY*KLIERA
Trigger: GGCCCTTTCTATAAGTTTTCAGTACACCTTAAACAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTTCATCATAATCTCTaGATCGCCTCTTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLFHHNL*IASLVV
Trigger: TACCACCAAAGAGGCGATGCAGAGATTATGATGAAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTGCTCAGAAGAGTTTaGAGGTGGTGCAGACACAGG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLLRRV*RWCRHR
Trigger: CCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGAAAGGAATCATACTTaGCAGAGCAACTTCATCAAC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLERNHT*QSNFIN
Trigger: GTTGATGAAGTTGCTCTGCCAAGTATGATTCCTTTC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAAGCACAACGGATGGTaGAGGCTGACCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTKHNGW*RLTMSL
Trigger: CAAGGACATGGTCAGCCTCCACCATCCGTTGTGCTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACATGAGGTTTCGAGGTaGCACCAAACGAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTHEVSR*HQTSCQ
Trigger: TTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGACCTTGAGAGGACATaGTCTTTCCTCGACCCACAG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTDLERT*SFLDPQ
Trigger: CTGTGGGTCGAGGAAAGACCATGTCCTCTCAAGGTC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTAAATTTTGGCCCTTaGTTTGCGGTTGAGAAATGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLNFGP*FAVEKC
Trigger: GCATTTCTCAACCGCAAACCAAGGGCCAAAATTTAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGATGCGTATGTTCATaGATAGCAACAAGCTACAAA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGCVCS*IATSYK
Trigger: TTTGTAGCTTGTTGCTATCCATGAACATACGCATCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGTGTTTTCAGAGTGGTaGGCAGGTGCGATCACAGTA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTVFSEW*AGAITV
Trigger: TACTGTGATCGCACCTGCTCACCACTCTGAAAACAC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGATGTTGTTCAATTCCTaGGGGATTTTCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLMLFNS*GIFLTS
Trigger: AGAAGTCAAGAAAATCCCTCAGGAATTGAACAACAT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGTGATGGTGCTGCTGTaGGAGGTGACTAAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTVMVLL*EVTKCL
Trigger: CAAACACTTAGTCACCTCTCACAGCAGCACCATCAC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACCCTTGGTTTGCGGTTaGGAAATGCTGAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTPLVCG*EMLKQV
Trigger: GACTTGCTTCAGCATTTCTCAACCGCAAACCAAGGG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGCCTCAAACCTTACTaGAAAAACTGTTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGLKPY*KNCFSL
Trigger: AAGTGAAAAACAGTTTTTTCAGTAAGGTTTGAGGCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGAGTTTGGAGGTGGTaGAGACACAGGCACATAGGA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRVWRW*RHRHIG
Trigger: TCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGAGTGGTGAGCAGGTaGGATCACAGTAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRVVSR*DHSNSA
Trigger: AGCACTGTTACTGTGATCGCACCTGCTCACCACTCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTCTGGATACCTCCGTaGACTGTTGAAGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTFWIPP*TVEGAD
Trigger: GTCTGCTCCTTCAACAGTGCACGGAGGTATCCAGAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGGTACCTTGGGCTTGTaGCATGATATCTGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTGTLGL*HDICSR
Trigger: TCGGCTACAGATATCATGGCACAAGCCCAAGGTACC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAAGAGGGACAGAACTTaGTTTAGATGCTGTATGTTA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLKRDRT*FRCCML
Trigger: TAACATACAGCATCTAAAGCAAGTTCTGTCCCTCTT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACAACTGTTAGTGCTTTaGGACGATGGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTQLLVL*DDGPPP
Trigger: TGGTGGTGGACCATCGTCCCAAAGCACTAACAGTTG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAACTAGTATATCAGGCTaGCCTAGTCAACTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTTSISG*PSQLVA
Trigger: AGCCACCAGTTGACTAGGTCAGCCTGATATACTAGT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTACTGGTTCCAAAAGTaGAAGGTAGTTCTTAGTATA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLYWFQK*KVVLSI
Trigger: TATACTAAGAACTACCTTCCACTTTTGGAACCAGTA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTCAACATTCCTATTTaGATCCCGGTCTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLNIPI*IPVFAA
Trigger: CGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGAAGAGTTTGGAGGTaGTGCAGACACAGGCACATA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRRVWR*CRHRHI
Trigger: TATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCTTAAAAGCAACCTaGATATTAACAATAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPLKAT*ILTIVP
Trigger: TGGAACTATTGTTAATATCCAGGTTGCTTTTAAGGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACTCAGTGGATATAGATaGTACCTTGGGCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLSGYR*YLGLVP
Trigger: TGGCACAAGCCCAAGGTACCATCTATATCCACTGAG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCATATGACAAGAGAATaGAAATACTATAGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLHMTRE*KYYRAS
Trigger: GCTAGCTCTATAGTATTTCCATTCTCTTGTCATATG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTATTTATCCAGGTGCTaGTTTGAACCTTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLYLSRC*FEPFIG
Trigger: TCCAATAAAAGGTTCAAACCAGCACCTGGATAAATA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGTCACCTCACCATCATaGTTTAAATTTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLVTSPS*FKFRKR
Trigger: TCTTTTCCTAAATTTAAACCATGATGGTGAGGTGAC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACAGGTTTGTCCTTCTTaGCCAGTGCTACAACATAGT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTQVCPS*PVLQHS
Trigger: ACTATGTTGTAGCACTGGTCAAGAAGGACAAACCTG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAACTCTGGTTACCACCTaGATGTCCAAGACGATGTTT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTTLVTT*MSKTMF
Trigger: AAACATCGTCTTGGACATGCAGGTGGTAACCAGAGT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGTGCTACAACATAGTTaGCTAAGGCTGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTVLQHS*LRLKDQ
Trigger: CTGATCCTTCAGCCTTAGCCAACTATGTTGTAGCAC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATGTTATAGGTGGTCTTaGTATGGGAAGCACAACGGA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTCYRWS*YGKHNG
Trigger: TCCGTTGTGCTTCCCATACCAAGACCACCTATAACA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAACTGGTGGTTCAGTCTaGATCACAATGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTTGGSV*ITMLAA
Trigger: AGCTGCTAACATTGTGATCCAGACTGAACCACCAGT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGGTTTCTTTGTGAGTaGCCCTTCCAAACCACTCAT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTRFLCE*PFQTTH
Trigger: ATGAGTGGTTTGGAAGGGCCACTCACAAAGAAACCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTGCTCATCATCTTCTaGATACCTCCGTGCACTGTT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLLIIF*IPPCTV
Trigger: AACAGTGCACGGAGGTATCCAGAAGATGATGAGCAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGACCTAGTCAACTGGTaGCTATTATTGCTGATCAGC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTDLVNW*LLLLIS
Trigger: GCTGATCAGCAATAATAGCCACCAGTTGACTAGGTC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGCTGACCTAGTCAACTaGTGGCTATTATTGCTGATC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTADLVN*WLLLLI
Trigger: GATCAGCAATAATAGCCACCAGTTGACTAGGTCAGC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CAA 72 bp AACAAAATCCTTGATATAGTGGTCACCAAGACCCTTTaGGAGACAACAGGAGGTTTCAAATTTTCATACCAC +
Preference number: 4 (lower is better)
Translates to: NKILDIVVTKTL*ETTGGFKFSYH
Trigger: GTGGTATGAAAATTTGAAACCTCCTGTTGTCTCCAAAAGGGTCTTGGTGACCACTATATCAAGGATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
3UTR CAA 72 bp GTATATCAGGCTGACCTAGTCAACTGGTGGCTATTATaGCTGATCAGCTACTTAAAAAGATGTCATACACAT +
Preference number: 4 (lower is better)
Translates to: VYQADLVNWWLL*LISYLKRCHTH
Trigger: ATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTTGACTAGGTCAGCCTGATATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAATTTCATCTTCGCCATaGGCGAGACTCATATTCATC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTISSSP*ARLIFI
Trigger: GATGAATATGAGTCTCGCTCATGGCGAAGATGAAAT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAATACTAGGAGCTTCTaGGTTGTAACCATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTNTRSF*VVTIWF
Trigger: GAACCAGATGGTTACAACCCAGAAGCTCCTAGTATT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCATTGGTAAGATATTaGATTAGGGCTGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSLVRY*IRAASG
Trigger: CCCAGAAGCAGCCCTAATCCAATATCTTACCAATGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCTAATAACTCCTTCTaGGCCTCCGTTTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSNNSF*ASVFVF
Trigger: GAAGACAAAAACGGAGGCCCAGAAGGAGTTATTAGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGCAAACAAAATCCTTaGTATAGTGGTCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSKQNP*YSGHQD
Trigger: GTCTTGGTGACCACTATATCAAGGATTTTGTTTGCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTTTATCTTGGACAGTaGTCCACTAGTATATCAGGC +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTFYLGQ*STSISG
Trigger: GCCTGATATACTAGTGGATCACTGTCCAAGATAAAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTCGATCTTTCCCTGTaGTCAACATTCCTATTTGGA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTFDLSL*STFLFG
Trigger: TCCAAATAGGAATGTTGAGCACAGGGAAAGATCGAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCTGAACGAGTCTTCTaGGGACTAGGATATTTCTTT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSERVF*GLGYFF
Trigger: AAAGAAATATCCTAGTCCCCAGAAGACTCGTTCAGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTGGTGTTTGTATACTaGTTCTTTCGTAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLVFVY*FFRKNP
Trigger: AGGGTTCTTACGAAAGAATCAGTATACAAACACCAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTCCAAGACCACTCTTaGAAGCAAAAGGGTATTTTA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTFQDHS*KQKGIL
Trigger: TAAAATACCCTTTTGCTTTCAAGAGTGGTCTTGGAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR TCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATGTTGTGATTTTCACTaGACTAGTACTACCACACAT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTCCDFH*TSTTTH
Trigger: ATGTGTGGTAGTACTAGTTCAGTGAAAATCACAACA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCTTTTTCGACTATCTaGTTCAAGAACTACTCTGGT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSFSTI*FKNYSG
Trigger: ACCAGAGTAGTTCTTGAACCAGATAGTCGAAAAAGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR GCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATCATTATTTTCCCTATaGCACAAGACTCGAATGAAT +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSLFSL*HKTRMN
Trigger: ATTCATTCGAGTCTTGTGGCATAGGGAAAATAATGA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CCA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAATTTCTTCTTTTTCTTaGACTAGTGGTTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTISSFS*TSGFGS
Trigger: TGAGCCAAAACCACTAGTCCAAGAAAAAGAAGAAAT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TGCAGGGAAGGCGGGCTCGGCCGCCGCTCTTCTTCAGGCCTGCCGTaGGTCTCCACTACGCCGCCCCCTCACGTTCCCTTCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: CREGGLGRRSSSGLP*VSTTPPPHVPFTAP
Trigger: GGGAGCTGTGAAGGGAACGTGAGGGGGCGGCGTAGTGGAGACCCACGGCAGGCCTGAAGAAGAGCGGCGGCCGAGCCCGCCTTCCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp AGGAAGTCTCATACTATGGCCAGGACCTGGACCTGGGCCCGGGCCTaGGCCTGGACCTGGGCCCGGGCCTGGGCCTGGACCTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: RKSHTMARTWTWARA*AWTWARAWAWTWHW
Trigger: CCAATGCCAGGTCCAGGCCCAGGCCCGGGCCCAGGTCCAGGCCCAGGCCCGGGCCCAGGTCCAGGTCCTGGCCATAGTATGAGACTTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TCCTTGGGGAACAGGAAGTCTCATACTATGGCCAGGACCTGGACCTaGGCCCGGGCCTGGGCCTGGACCTGGGCCCGGGCCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLGNRKSHTMARTWT*ARAWAWTWARAWAW
Trigger: CCAGGCCCAGGCCCGGGCCCAGGTCCAGGCCCAGGCCCGGGCCCAGGTCCAGGTCCTGGCCATAGTATGAGACTTCCTGTTCCCCAAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp CATGGTGCAGGGAAGGCGGGCTCGGCCGCCGCTCTTCTTCAGGCCTaGCGTGGGTCTCCACTACGCCGCCCCCTCACGTTCCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: HGAGKAGSAAALLQA*RGSPLRRPLTFPSQ
Trigger: CTGTGAAGGGAACGTGAGGGGGCGGCGTAGTGGAGACCCACGGCAGGCCTGAAGAAGAGCGGCGGCCGAGCCCGCCTTCCCTGCACCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp GGTCTCCACTACGCCGCCCCCTCACGTTCCCTTCACAGCTCCCGGTaGCCCAGCCCACCGGGCATCTTAGGAGACTTCAACCTACTCCCC +
Preference number: 5 (lower is better)
Translates to: GLHYAAPSRSLHSSR*PSPPGILGDFNLLP
Trigger: GGGGAGTAGGTTGAAGTCTCCTAAGATGCCCGGTGGGCTGGGGCACCGGGAGCTGTGAAGGGAACGTGAGGGGGCGGCGTAGTGGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp GGTGGCACCAAACGAGCTGCCAACAGAGGAGGCGGTGTCCCCAACTaGAGTCGCTCAGATGCAGCAGCACCATGTTCACGAGAGTACATG +
Preference number: 5 (lower is better)
Translates to: GGTKRAANRGGGVPN*SRSDAAAPCSREYM
Trigger: CATGTACTCTCGTGAACATGGTGCTGCTGCATCTGAGCGACTTCAGTTGGGGACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TCCAATGGAGGATCCCATGAGGTTTCGAGGTGGCACCAAACGAGCTaGCAACAGAGGAGGCGGTGTCCCCAACTGAAGTCGCTCAGATGC +
Preference number: 5 (lower is better)
Translates to: SNGGSHEVSRWHQTS*QQRRRCPQLKSLRC
Trigger: GCATCTGAGCGACTTCAGTTGGGGACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATGGGATCCTCCATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TATTTGGATCCCGGTCTTTGCTGCGCCCCCTACTTCGGCTTCTACTaGGACTCAGGCCTCGACTCTTACTCCGACTCTTACTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: YLDPGLCCAPYFGFY*DSGLDSYSDSYSCL
Trigger: GAGGCAGGAGTAAGAGTCGGAGTAAGAGTCGAGGCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp CTCTTCCTCCACGCCCTCGGCCTCTTCCTCGACCTTGAGAGGACATaGTCTTTCCTCGACCCACAGGTAAAATACCTAACCGTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LFLHALGLFLDLERT*SFLDPQVKYLTVQP
Trigger: AGGCTGCACGGTTAGGTATTTTACCTGTGGGTCGAGGAAAGACCATGTCCTCTCAAGGTCGAGGAAGAGGCCGAGGGCGTGGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TCGATCTTTCCCTGTGCTCAACATTCCTATTTGGATCCCGGTCTTTaGTGCGCCCCCTACTTCGGCTTCTACTGCGACTCAGGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: SIFPCAQHSYLDPGL*CAPYFGFYCDSGLD
Trigger: GTCGAGGCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACAGGGAAAGATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp ATCTTTCCCTGTGCTCAACATTCCTATTTGGATCCCGGTCTTTGCTaGGCCCCCTACTTCGGCTTCTACTGCGACTCAGGCCTCGACTCT +
Preference number: 5 (lower is better)
Translates to: IFPCAQHSYLDPGLC*APYFGFYCDSGLDS
Trigger: AGAGTCGAGGCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACAGGGAAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TCTGGGGTAAAGGAGGAGGTAGTCTTGTTCCCACTGATGCAAGATTaGGCACTGCACTTGTCCCAGGCTGGTCACGGCTGTTTATCAAGC +
Preference number: 5 (lower is better)
Translates to: SGVKEEVVLFPLMQD*ALHLSQAGHGCLSS
Trigger: GCTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGACTACCTCCTCCTTTACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp GTTATAGGTGGTCTTGGTATGGGAAGCACAACGGATGGTGGAGGCTaGCCATGTCCTTGGGGAACAGGAAGTCTCATACTATGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VIGGLGMGSTTDGGG*PCPWGTGSLILWPG
Trigger: TCCTGGCCATAGTATGAGACTTCCTGTTCCCCAAGGACATGGTCAGCCTCCACCATCCGTTGTGCTTCCCATACCAAGACCACCTATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp GCTGGGAATAGACTGTGCCCCAGAGGAATACTGCTCAGAAGAGTTTaGAGGTGGTGCAGACACAGGCACATAGGAACTCTCCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: AGNRLCPRGILLRRV*RWCRHRHIGTLQVI
Trigger: AATGACCTGGAGAGTTCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGCACAGTCTATTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp ATCTGGTTCATATGTATCTGGAACCAGAGGGGTAGGGCTGGAGACTaGGGTATGGTATCCAATGGAGGATCCCATGAGGTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: IWFICIWNQRGRAGD*GMVSNGGSHEVSRW
Trigger: CCACCTCGAAACCTCATGGGATCCTCCATTGGATACCATACCTCAGTCTCCAGCCCTACCCCTCTGGTTCCAGATACATATGAACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp AGACTGTGCCCCAGAGGAATACTGCTCAGAAGAGTTTGGAGGTGGTaGAGACACAGGCACATAGGAACTCTCCAGGTCATTCCTTTCACT +
Preference number: 5 (lower is better)
Translates to: RLCPRGILLRRVWRW*RHRHIGTLQVIPFT
Trigger: AGTGAAAGGAATGACCTGGAGAGTTCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGCACAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TCATATGTATCTGGAACCAGAGGGGTAGGGCTGGAGACTGAGGTATaGTATCCAATGGAGGATCCCATGAGGTTTCGAGGTGGCACCAAA +
Preference number: 5 (lower is better)
Translates to: SYVSGTRGVGLETEV*YPMEDPMRFRGGTK
Trigger: TTTGGTGCCACCTCGAAACCTCATGGGATCCTCCATTGGATACCATACCTCAGTCTCCAGCCCTACCCCTCTGGTTCCAGATACATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTTGGATCCCGGTCTTaGCTGCGCCCCCTACTTCGG +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLFGSRS*LRPLLR
Trigger: CCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TTCTACTGCGACTCAGGCCTCGACTCTTACTCCGACTCTTACTCCTaGCTCTTCTCCAGTCATACTTCTCACGGTACAATTCATTCCGCT +
Preference number: 5 (lower is better)
Translates to: FYCDSGLDSYSDSYS*LFSSHTSHGTIHSA
Trigger: AGCGGAATGAATTGTACCGTGAGAAGTATGACTGGAGAAGAGGCAGGAGTAAGAGTCGGAGTAAGAGTCGAGGCCTGAGTCGCAGTAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp AATAGACTGTGCCCCAGAGGAATACTGCTCAGAAGAGTTTGGAGGTaGTGCAGACACAGGCACATAGGAACTCTCCAGGTCATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: NRLCPRGILLRRVWR*CRHRHIGTLQVIPF
Trigger: GAAAGGAATGACCTGGAGAGTTCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGCACAGTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp GTAATTAGACCAACTCTCAGTTGTGTTTTCAGAGTGGTGAGCAGGTaGGATCACAGTAACAGTGCTGGGAATAGACTGTGCCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VIRPTLSCVFRVVSR*DHSNSAGNRLCPRG
Trigger: TCCTCTGGGGCACAGTCTATTCCCAGCACTGTTACTGTGATCGCACCTGCTCACCACTCTGAAAACACAACTGAGAGTTGGTCTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TGCTGTTGTTGCAGGAGCAGCTGTGCTGAGGACTGTAGTGTCGGTTaGTCATTATTTTCCCTATGCCACAAGACTCGAATGAATCGGTTG +
Preference number: 5 (lower is better)
Translates to: CCCCRSSCAEDCSVG*SLFSLCHKTRMNRL
Trigger: CAACCGATTCATTCGAGTCTTGTGGCATAGGGAAAATAATGAGCAACCGACACTACAGTCCTCAGCACAGCTGCTCCTGCAACAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS CCA 90 bp CTTGTTCCCACTGATGCAAGATTGGGCACTGCACTTGTCCCAGGCTaGTCACGGCTGTTTATCAAGCTTGATTGTGTTATAGGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LVPTDARLGTALVPG*SRLFIKLDCVIGGL
Trigger: AAGACCACCTATAACACAATCAAGCTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCCACTGATGCAAGATaGGGCACTGCACTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPTDAR*GTALVP
Trigger: TGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCCAACTGTTAGTGCTTaGGGACGATGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLPTVSA*GRWSTT
Trigger: GGTGGTGGACCATCGTCCCAAAGCACTAACAGTTGG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TTTTTCCGTAATTCTGTGGTGTCTTCTCCTGAGGACAGCCTCTTGTaGAGGTCCAGTTCAGTATCTAATAACTCCTTCTGGGCCTCCGTT +
Preference number: 5 (lower is better)
Translates to: FFRNSVVSSPEDSLL*RSSSVSNNSFWASV
Trigger: AACGGAGGCCCAGAAGGAGTTATTAGATACTGAACTGGACCTCCACAAGAGGCTGTCCTCAGGAGAAGACACCACAGAATTACGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTCTGCATCGCCTCTTaGGTGGTAGGTTTCGACCAA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLCIAS*VVGFDQ
Trigger: TTGGTCGAAACCTACCACCAAAGAGGCGATGCAGAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAGGCTGACCATGTCCTaGGGGAACAGGAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLRLTMS*GNRKSH
Trigger: ATGAGACTTCCTGTTCCCCAAGGACATGGTCAGCCT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TCTGTGCTAGAAATGGCTTTCCTGGCCTCCTCATTGGTAAGATATTaGATTAGGGCTGCTTCTGGGTCACCCTTAAAAGCAACCTGGATA +
Preference number: 5 (lower is better)
Translates to: SVLEMAFLASSLVRY*IRAASGSPLKATWI
Trigger: TATCCAGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAATATCTTACCAATGAGGAGGCCAGGAAAGCCATTTCTAGCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TCTGTGCTAGAAATGGCTTTCCTGGCCTCCTCATTGGTAAGATATTaGATTAGGGCTGCTTCTGGGTCACCCTTAAAAGCAACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVLEMAFLASSLVRY*IRAASGSPLKATLK
Trigger: CTTCAAGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAATATCTTACCAATGAGGAGGCCAGGAAAGCCATTTCTAGCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508019.1
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCTCAACATTCCTATTaGGATCCCGGTCTTTGCTGC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLAQHSY*DPGLCC
Trigger: GCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGATTGGGCACTGCACTaGTCCCAGGCTGGTCACGGC +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTDWALH*SQAGHG
Trigger: GCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGCCCTTGGTTTGCGGTaGAGAAATGCTGAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLALGLR*RNAEAS
Trigger: ACTTGCTTCAGCATTTCTCAACCGCAAACCAAGGGC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGATGGTACCTTGGGCTaGTGCCATGATATCTGTAGC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLDGTLG*CHDICS
Trigger: GCTACAGATATCATGGCACAAGCCCAAGGTACCATC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGTTTGAACCTTTTATaGGAGACTGCCTGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGLNLL*ETACGC
Trigger: GCAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGTCACCAAGACCCTTTaGGAGACAACAGGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLVTKTL*ETTGGF
Trigger: GAAACCTCCTGTTGTCTCCAAAAGGGTCTTGGTGAC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp CCTGGAGTTGAAAATATCTGGCAATCTTCTCCAGCACCACCAGACTaGTTCAACAAATGTGATGCATCACTCTGGTTACCACCTGCATGT +
Preference number: 5 (lower is better)
Translates to: PGVENIWQSSPAPPD*FNKCDASLWLPPAC
Trigger: ACATGCAGGTGGTAACCAGAGTGATGCATCACATTTGTTGAATCAGTCTGGTGGTGCTGGAGAAGATTGCCAGATATTTTCAACTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp TTGCGGTTGAGAAATGCTGAAGCAAGTCTTCTTTTTCTTCCTCAATaGATCCTCCAACTGTTAGTGCTTTGGGACGATGGTCCACCACCA +
Preference number: 5 (lower is better)
Translates to: LRLRNAEASLLFLPQ*ILQLLVLWDDGPPP
Trigger: TGGTGGTGGACCATCGTCCCAAAGCACTAACAGTTGGAGGATTCATTGAGGAAGAAAAAGAAGACTTGCTTCAGCATTTCTCAACCGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 90 bp TCTTCTTCTTCAGTCTCAGTGGATATAGATGGTACCTTGGGCTTGTaGCATGATATCTGTAGCCGACGGTCTTTAAATTTTGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SSSSVSVDIDGTLGL*HDICSRRSLNFGPW
Trigger: CCAAGGGCCAAAATTTAAAGACCGTCGGCTACAGATATCATGGCACAAGCCCAAGGTACCATCTATATCCACTGAGACTGAAGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGCTTGGACTAGTGGTTTaGGCTCAGGCTTTACTGGTT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLGLVV*AQALLV
Trigger: AACCAGTAAAGCCTGAGCCAAAACCACTAGTCCAAG...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAATCGGCTCCAGTAACTaGGCCAGCCAGGACTTGAGG +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTIGSSN*ASQDLR
Trigger: CCTCAAGTCCTGGCTGGCCAAGTTACTGGAGCCGAT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATACCTCCGTGCACTGTaGAAGGAGCAGACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTYLRAL*KEQTGP
Trigger: TGGCCCAGTCTGCTCCTTCAACAGTGCACGGAGGTA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGATTTTGGCCCTTGGTTaGCGGTTGAGAAATGCTGAA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLILALG*RLRNAE
Trigger: TTCAGCATTTCTCAACCGCAAACCAAGGGCCAAAAT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGATATAGATGGTACCTaGGGCTTGTGCCATGATATC +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLDIDGT*GLCHDI
Trigger: GATATCATGGCACAAGCCCAAGGTACCATCTATATC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp TCCAAGACGATGTTTAACAGGAACTTTGTTAAGAACATATGCACCTaGTGTCTGTGGTTTGCTCATCATCTTCTGGATACCTCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: SKTMFNRNFVKNICT*CLWFAHHLLDTSVH
Trigger: GTGCACGGAGGTATCCAGAAGATGATGAGCAAACCACAGACATCAGGTGCATATGTTCTTAACAAAGTTCCTGTTAAACATCGTCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TTGATTGTTATTTCCTTGCTTTCCCAGCCAAGGTTTCTTTGTGAGTaGCCCTTCCAAACCACTCATAGCTCTTTTTCGACTATCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LIVISLLSQPRFLCE*PFQTTHSSFSTIWF
Trigger: GAACCAGATAGTCGAAAAAGAGCTATGAGTGGTTTGGAAGGGCCACTCACAAAGAAACCTTGGCTGGGAAAGCAAGGAAATAACAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGAATTCTTTCTCAGGTTaGTCCTTCTTGACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLNSFSG*SFLTSA
Trigger: AGCACTGGTCAAGAAGGACAAACCTGAGAAAGAATT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGAAAGGAATCATACTaGGCAGAGCAACTTCATCAA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGKESY*AEQLHQ
Trigger: TTGATGAAGTTGCTCTGCCAAGTATGATTCCTTTCC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACTCGAATGAATCGGTaGTTTAGAACTGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTRMNR*FRTASV
Trigger: CACAGAAGCAGTTCTAAACAACCGATTCATTCGAGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTGGATGGCCTGGAGTaGAAAATATCTGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLDGLE*KISGNL
Trigger: AAGATTGCCAGATATTTTCAACTCCAGGCCATCCAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACCCTGAACAGAGCTTaGAAGGTGTCTTTAAGTTTG +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTLNRA*KVSLSL
Trigger: CAAACTTAAAGACACCTTCAAAGCTCTGTTCAGGGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACCTGAGGACAGCCTCTaGTGGAGGTCCAGTTCAGTA +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTPEDSL*WRSSSV
Trigger: TACTGAACTGGACCTCCACAAGAGGCTGTCCTCAGG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTATCCAGGTGCTGGTTaGAACCTTTTATTGGAGACT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLYPGAG*NLLLET
Trigger: AGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 90 bp GATCAGCACAAAAGGCTTTTAATTCTTTCTCAGGTTTGTCCTTCTTaGCCAGTGCTACAACATAGTTGGCTAAGGCTGAAGGATCAGCAT +
Preference number: 5 (lower is better)
Translates to: DQHKRLLILSQVCPS*PVLQHSWLRLKDQH
Trigger: ATGCTGATCCTTCAGCCTTAGCCAACTATGTTGTAGCACTGGTCAAGAAGGACAAACCTGAGAAAGAATTAAAAGCCTTTTGTGCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TGTGAGTGGCCCTTCCAAACCACTCATAGCTCTTTTTCGACTATCTaGTTCAAGAACTACTCTGGTTATGTTGCTATTAATCGAAACAGG +
Preference number: 5 (lower is better)
Translates to: CEWPFQTTHSSFSTI*FKNYSGYVAINRNR
Trigger: CCTGTTTCGATTAATAGCAACATAACCAGAGTAGTTCTTGAACCAGATAGTCGAAAAAGAGCTATGAGTGGTTTGGAAGGGCCACTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGTTGATTGTTATTTCCTaGCTTTCCCAGCCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLLIVIS*LSQPRF
Trigger: AAACCTTGGCTGGGAAAGCAAGGAAATAACAATCAA...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGGGTTACCTTTTTATCTaGGACAGTGATCCACTAGTA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLGYLFI*DSDPLV
Trigger: TACTAGTGGATCACTGTCCAAGATAAAAAGGTAACC...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp ACTTATTTATCCAGGTGCTGGTTTGAACCTTTTATTGGAGACTGCCTGCGGTTGACTACTCTGGTTATGTaGCTATTAATCGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: TYLSRCWFEPFIGDCLRLTTLVM*LLIETG
Trigger: TCCTGTTTCGATTAATAGCAACATAACCAGAGTAGT...CAACCGCAGGCAGTCTCCAATAAAAGGTTCAAACCAGCACCTGGATAAATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAGAGGTGACTAAGTGTTaGCTGTTGTTGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTEVTKC*LLLQEQ
Trigger: CTGCTCCTGCAACAACAGCAAACACTTAGTCACCTC...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp AAGAACTACTCTGGTTATGTTGCTATTAATCGAAACAGGAACTGGTaGTTCAGTCTGGATCACAATGTTAGCAGCTCTTGGATTTACATC +
Preference number: 5 (lower is better)
Translates to: KNYSGYVAINRNRNW*FSLDHNVSSSWIYI
Trigger: GATGTAAATCCAAGAGCTGCTAACATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGAGTAGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 90 bp TTCAAGAACTACTCTGGTTATGTTGCTATTAATCGAAACAGGAACTaGTGGTTCAGTCTGGATCACAATGTTAGCAGCTCTTGGATTTAC +
Preference number: 5 (lower is better)
Translates to: FKNYSGYVAINRNRN*WFSLDHNVSSSWIY
Trigger: GTAAATCCAAGAGCTGCTAACATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGAGTAGTTCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAAGGAGGAGGTAGTCTaGTTCCCACTGATGCAAGAT +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTKEEVV*FPLMQD
Trigger: ATCTTGCATCAGTGGGAACAAGACTACCTCCTCCTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACACAGTACAGTGTAGTGTaGCTCCTCTGCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTQYSVV*LLCFSI
Trigger: GATGGAAAAGCAGAGGAGCAACACTACACTGTACTG...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTCCTGGCCTCCTCATaGGTAAGATATTGGATTAGG +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTFLASS*VRYWIR
Trigger: CCTAATCCAATATCTTACCAATGAGGAGGCCAGGAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACATTGCTGAAGTGTTCATaGAGCTTGGTAATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTLLKCS*SLVMLF
Trigger: GAACAACATTACCAAGCTCAATGAACACTTCAGCAA...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAGCTGTAAATCATTTTaGGATGGCCTGGAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTSCKSF*DGLELK
Trigger: TTTCAACTCCAGGCCATCCAAAAATGATTTACAGCT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAAGTGTTCATTGAGCTaGGTAATGTTGTTCAATTCC +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTKCSLS*VMLFNS
Trigger: GGAATTGAACAACATTACCAAGCTCAATGAACACTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS-3UTR CAA 90 bp GCTATTATTGCTGATCAGCTACTTAAAAAGATGTCATACACATTAAGAGGGACAAACTGGTGGCTATTATaGCTGATCAGCTACTTAAAA +
Preference number: 5 (lower is better)
Translates to: AIIADQLLKKMSYTLRGTNWWLL*LISYLK
Trigger: TTTTAAGTAGCTGATCAGCAATAATAGCCACCAGTT...TGTCCCTCTTAATGTGTATGACATCTTTTTAAGTAGCTGATCAGCAATAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp GGGAAGGCGGGCTCGGCCGCCGCTCTTCTTCAGGCCTaGCGTGGGTCTCCACTACGCCGCCCCCTCACGTTC +
Preference number: 6 (lower is better)
Translates to: GKAGSAAALLQA*RGSPLRRPLTF
Trigger: GAACGTGAGGGGGCGGCGTAGTGGAGACCCACGGCAGGCCTGAAGAAGAGCGGCGGCCGAGCCCGCCTTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp GGCGGGCTCGGCCGCCGCTCTTCTTCAGGCCTGCCGTaGGTCTCCACTACGCCGCCCCCTCACGTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: GGLGRRSSSGLP*VSTTPPPHVPF
Trigger: GAAGGGAACGTGAGGGGGCGGCGTAGTGGAGACCCACGGCAGGCCTGAAGAAGAGCGGCGGCCGAGCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp TACGCCGCCCCCTCACGTTCCCTTCACAGCTCCCGGTaGCCCAGCCCACCGGGCATCTTAGGAGACTTCAAC +
Preference number: 6 (lower is better)
Translates to: YAAPSRSLHSSR*PSPPGILGDFN
Trigger: GTTGAAGTCTCCTAAGATGCCCGGTGGGCTGGGGCACCGGGAGCTGTGAAGGGAACGTGAGGGGGCGGCGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp CCCGGTCTTTGCTGCGCCCCCTACTTCGGCTTCTACTaGGACTCAGGCCTCGACTCTTACTCCGACTCTTAC +
Preference number: 6 (lower is better)
Translates to: PGLCCAPYFGFY*DSGLDSYSDSY
Trigger: GTAAGAGTCGGAGTAAGAGTCGAGGCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp GGATCCCATGAGGTTTCGAGGTGGCACCAAACGAGCTaGCAACAGAGGAGGCGGTGTCCCCAACTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: GSHEVSRWHQTS*QQRRRCPQLKS
Trigger: CGACTTCAGTTGGGGACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp CAGAGGAGGCGGTGTCCCCAACTGAAGTCGCTCAGATaGAGCAGCACCATGTTCACGAGAGTACATGGGCTG +
Preference number: 6 (lower is better)
Translates to: QRRRCPQLKSLR*SSTMFTRVHGL
Trigger: CAGCCCATGTACTCTCGTGAACATGGTGCTGCTGCATCTGAGCGACTTCAGTTGGGGACACCGCCTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 72 bp AAACGAGCTGCCAACAGAGGAGGCGGTGTCCCCAACTaGAGTCGCTCAGATGCAGCAGCACCATGTTCACGA +
Preference number: 6 (lower is better)
Translates to: KRAANRGGGVPN*SRSDAAAPCSR
Trigger: TCGTGAACATGGTGCTGCTGCATCTGAGCGACTTCAGTTGGGGACACCGCCTCCTCTGTTGGCAGCTCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp TCTTGGTATGGGAAGCACAACGGATGGTGGAGGCTGACCATGTCCTaGGGGAACAGGAAGTCTCATACTATGGCCAGGACCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: SWYGKHNGWWRLTMS*GNRKSHTMARTWTW
Trigger: CCAGGTCCAGGTCCTGGCCATAGTATGAGACTTCCTGTTCCCCAAGGACATGGTCAGCCTCCACCATCCGTTGTGCTTCCCATACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp TGTGCTCAACATTCCTATTTGGATCCCGGTCTTTGCTaGGCCCCCTACTTCGGCTTCTACTGCGACTCAGGC +
Preference number: 6 (lower is better)
Translates to: CAQHSYLDPGLC*APYFGFYCDSG
Trigger: GCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp CCCTGTGCTCAACATTCCTATTTGGATCCCGGTCTTTaGTGCGCCCCCTACTTCGGCTTCTACTGCGACTCA +
Preference number: 6 (lower is better)
Translates to: PCAQHSYLDPGL*CAPYFGFYCDS
Trigger: TGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp AAGGAGGAGGTAGTCTTGTTCCCACTGATGCAAGATTaGGCACTGCACTTGTCCCAGGCTGGTCACGGCTGT +
Preference number: 6 (lower is better)
Translates to: KEEVVLFPLMQD*ALHLSQAGHGC
Trigger: ACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGACTACCTCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp ATGGTATCCAATGGAGGATCCCATGAGGTTTCGAGGTaGCACCAAACGAGCTGCCAACAGAGGAGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: MVSNGGSHEVSR*HQTSCQQRRRC
Trigger: ACACCGCCTCCTCTGTTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATGGGATCCTCCATTGGATACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp CACGCCCTCGGCCTCTTCCTCGACCTTGAGAGGACATaGTCTTTCCTCGACCCACAGGTAAAATACCTAACC +
Preference number: 6 (lower is better)
Translates to: HALGLFLDLERT*SFLDPQVKYLT
Trigger: GGTTAGGTATTTTACCTGTGGGTCGAGGAAAGACCATGTCCTCTCAAGGTCGAGGAAGAGGCCGAGGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TCCCTGTGCTCAACATTCCTATTTGGATCCCGGTCTTaGCTGCGCCCCCTACTTCGGCTTCTACTGCGACTC +
Preference number: 6 (lower is better)
Translates to: SLCSTFLFGSRS*LRPLLRLLLRL
Trigger: GAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp TTCGATCTTTCCCTGTGCTCAACATTCCTATTTGGATCCCGGTCTTaGCTGCGCCCCCTACTTCGGCTTCTACTGCGACTCAGGCCTCGA +
Preference number: 6 (lower is better)
Translates to: FDLSLCSTFLFGSRS*LRPLLRLLLRLRPR
Trigger: TCGAGGCCTGAGTCGCAGTAGAAGCCGAAGTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTTGAGCACAGGGAAAGATCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp ACAGTGCTGGGAATAGACTGTGCCCCAGAGGAATACTaGTCAGAAGAGTTTGGAGGTGGTGCAGACACAGGC +
Preference number: 6 (lower is better)
Translates to: TVLGIDCAPEEY*SEEFGGGADTG
Trigger: GCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGCACAGTCTATTCCCAGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp GTCTGTGGTTTGCTCATCATCTTCTGGATACCTCCGTaGACTGTTGAAGGAGCAGACTGGGCCACTAGCACC +
Preference number: 6 (lower is better)
Translates to: VCGLLIIFWIPP*TVEGADWATST
Trigger: GGTGCTAGTGGCCCAGTCTGCTCCTTCAACAGTGCACGGAGGTATCCAGAAGATGATGAGCAAACCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS CCA 72 bp TGCCCCAGAGGAATACTGCTCAGAAGAGTTTGGAGGTaGTGCAGACACAGGCACATAGGAACTCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: CPRGILLRRVWR*CRHRHIGTLQV
Trigger: GACCTGGAGAGTTCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp TCTGGAACCAGAGGGGTAGGGCTGGAGACTGAGGTATaGTATCCAATGGAGGATCCCATGAGGTTTCGAGGT +
Preference number: 6 (lower is better)
Translates to: SGTRGVGLETEV*YPMEDPMRFRG
Trigger: ACCTCGAAACCTCATGGGATCCTCCATTGGATACCATACCTCAGTCTCCAGCCCTACCCCTCTGGTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp GCTGAAGGATCAGCATCACATATCGGCTCCAGTAACTaGGCCAGCCAGGACTTGAGGGCATCCACATCCTCT +
Preference number: 6 (lower is better)
Translates to: AEGSASHIGSSN*ASQDLRASTSS
Trigger: AGAGGATGTGGATGCCCTCAAGTCCTGGCTGGCCAAGTTACTGGAGCCGATATGTGATGCTGATCCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp GTTTGCTCATCATCTTCTGGATACCTCCGTGCACTGTaGAAGGAGCAGACTGGGCCACTAGCACCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VCSSSSGYLRAL*KEQTGPLAPAA
Trigger: AGCAGCAGGTGCTAGTGGCCCAGTCTGCTCCTTCAACAGTGCACGGAGGTATCCAGAAGATGATGAGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS TCA 72 bp TGGAGACTGAGGTATGGTATCCAATGGAGGATCCCATaGGGTTTCGAGGTGGCACCAAACGAGCTGCCAACA +
Preference number: 6 (lower is better)
Translates to: WRLRYGIQWRIP*GFEVAPNELPT
Trigger: TGTTGGCAGCTCGTTTGGTGCCACCTCGAAACCTCATGGGATCCTCCATTGGATACCATACCTCAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp GTCTTGTTCCCACTGATGCAAGATTGGGCACTGCACTaGTCCCAGGCTGGTCACGGCTGTTTATCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: VLFPLMQDWALH*SQAGHGCLSSL
Trigger: CAAGCTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp TTCTGGGGTAAAGGAGGAGGTAGTCTTGTTCCCACTGATGCAAGATaGGGCACTGCACTTGTCCCAGGCTGGTCACGGCTGTTTATCAAG +
Preference number: 6 (lower is better)
Translates to: FWGKGGGSLVPTDAR*GTALVPGWSRLFIK
Trigger: CTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGACTACCTCCTCCTTTACCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp CTGATACTGTGTAAAGGAGGTTCTGGGGTAAAGGAGGAGGTAGTCTaGTTCCCACTGATGCAAGATTGGGCACTGCACTTGTCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LILCKGGSGVKEEVV*FPLMQDWALHLSQA
Trigger: AGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGACTACCTCCTCCTTTACCCCAGAACCTCCTTTACACAGTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp ATGTCTGTGGTTTGCTCATCATCTTCTGGATACCTCCGTGCACTGTaGAAGGAGCAGACTGGGCCACTAGCACCTGCTGCTGATGTAGAT +
Preference number: 6 (lower is better)
Translates to: MSVVCSSSSGYLRAL*KEQTGPLAPAADVD
Trigger: ATCTACATCAGCAGCAGGTGCTAGTGGCCCAGTCTGCTCCTTCAACAGTGCACGGAGGTATCCAGAAGATGATGAGCAAACCACAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS GCA 72 bp CCCAGAGGAATACTGCTCAGAAGAGTTTGGAGGTGGTaGAGACACAGGCACATAGGAACTCTCCAGGTCATT +
Preference number: 6 (lower is better)
Translates to: PRGILLRRVWRW*RHRHIGTLQVI
Trigger: AATGACCTGGAGAGTTCCTATGTGCCTGTGTCTGCACCACCTCCAAACTCTTCTGAGCAGTATTCCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp GAGGAGGTAGTCTTGTTCCCACTGATGCAAGATTGGGCACTGCACTaGTCCCAGGCTGGTCACGGCTGTTTATCAAGCTTGATTGTGTTA +
Preference number: 6 (lower is better)
Translates to: EEVVLFPLMQDWALH*SQAGHGCLSSLIVL
Trigger: TAACACAATCAAGCTTGATAAACAGCCGTGACCAGCCTGGGACAAGTGCAGTGCCCAATCTTGCATCAGTGGGAACAAGACTACCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp GACTCAGGCCTCGACTCTTACTCCGACTCTTACTCCTaGCTCTTCTCCAGTCATACTTCTCACGGTACAATT +
Preference number: 6 (lower is better)
Translates to: DSGLDSYSDSYS*LFSSHTSHGTI
Trigger: AATTGTACCGTGAGAAGTATGACTGGAGAAGAGGCAGGAGTAAGAGTCGGAGTAAGAGTCGAGGCCTGAGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp CCAACTCTCAGTTGTGTTTTCAGAGTGGTGAGCAGGTaGGATCACAGTAACAGTGCTGGGAATAGACTGTGC +
Preference number: 6 (lower is better)
Translates to: PTLSCVFRVVSR*DHSNSAGNRLC
Trigger: GCACAGTCTATTCCCAGCACTGTTACTGTGATCGCACCTGCTCACCACTCTGAAAACACAACTGAGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp TGCAGGAGCAGCTGTGCTGAGGACTGTAGTGTCGGTTaGTCATTATTTTCCCTATGCCACAAGACTCGAATG +
Preference number: 6 (lower is better)
Translates to: CRSSCAEDCSVG*SLFSLCHKTRM
Trigger: CATTCGAGTCTTGTGGCATAGGGAAAATAATGAGCAACCGACACTACAGTCCTCAGCACAGCTGCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS TCA 72 bp ACTTGTCCCAGGCTGGTCACGGCTGTTTATCAAGCTTaGTTGTGTTATAGGTGGTCTTGGTATGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: TCPRLVTAVYQA*LCYRWSWYGKH
Trigger: GTGCTTCCCATACCAAGACCACCTATAACACAATCAAGCTTGATAAACAGCCGTGACCAGCCTGGGACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 72 bp ATCTTCTCCAGCACCACCAGACTGATTCAACAAATGTaGTGCATCACTCTGGTTACCACCTGCATGTCCAAG +
Preference number: 6 (lower is better)
Translates to: IFSSTTRLIQQM*CITLVTTCMSK
Trigger: CTTGGACATGCAGGTGGTAACCAGAGTGATGCATCACATTTGTTGAATCAGTCTGGTGGTGCTGGAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp GAAATGGCTTTCCTGGCCTCCTCATTGGTAAGATATTaGATTAGGGCTGCTTCTGGGTCACCCTTAAAAGCA +
Preference number: 6 (lower is better)
Translates to: EMAFLASSLVRY*IRAASGSPLKA
Trigger: TGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAATATCTTACCAATGAGGAGGCCAGGAAAGCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS CCA 72 bp AATTCTGTGGTGTCTTCTCCTGAGGACAGCCTCTTGTaGAGGTCCAGTTCAGTATCTAATAACTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: NSVVSSPEDSLL*RSSSVSNNSFW
Trigger: CCAGAAGGAGTTATTAGATACTGAACTGGACCTCCACAAGAGGCTGTCCTCAGGAGAAGACACCACAGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp CGTAATTCTGTGGTGTCTTCTCCTGAGGACAGCCTCTaGTGGAGGTCCAGTTCAGTATCTAATAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: RNSVVSSPEDSL*WRSSSVSNNSF
Trigger: GAAGGAGTTATTAGATACTGAACTGGACCTCCACAAGAGGCTGTCCTCAGGAGAAGACACCACAGAATTACG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TCTTCTTCTTCAGTCTCAGTGGATATAGATGGTACCTaGGGCTTGTGCCATGATATCTGTAGCCGACGGTCT +
Preference number: 6 (lower is better)
Translates to: SSSSVSVDIDGT*GLCHDICSRRS
Trigger: AGACCGTCGGCTACAGATATCATGGCACAAGCCCAAGGTACCATCTATATCCACTGAGACTGAAGAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp GGTTGCTCATTATTTTCCCTATGCCACAAGACTCGAATGAATCGGTaGTTTAGAACTGCTTCTGTGCTAGAAATGGCTTTCCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GCSLFSLCHKTRMNR*FRTASVLEMAFLAS
Trigger: GGAGGCCAGGAAAGCCATTTCTAGCACAGAAGCAGTTCTAAACAACCGATTCATTCGAGTCTTGTGGCATAGGGAAAATAATGAGCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS CCA 72 bp ATTTCCTTGCTTTCCCAGCCAAGGTTTCTTTGTGAGTaGCCCTTCCAAACCACTCATAGCTCTTTTTCGACT +
Preference number: 6 (lower is better)
Translates to: ISLLSQPRFLCE*PFQTTHSSFST
Trigger: AGTCGAAAAAGAGCTATGAGTGGTTTGGAAGGGCCACTCACAAAGAAACCTTGGCTGGGAAAGCAAGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp ACTTCTTCTTCTTCAGTCTCAGTGGATATAGATGGTACCTTGGGCTaGTGCCATGATATCTGTAGCCGACGGTCTTTAAATTTTGGCCCT +
Preference number: 6 (lower is better)
Translates to: TSSSSVSVDIDGTLG*CHDICSRRSLNFGP
Trigger: AGGGCCAAAATTTAAAGACCGTCGGCTACAGATATCATGGCACAAGCCCAAGGTACCATCTATATCCACTGAGACTGAAGAAGAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TTAGGCCAATCAGATTGGGACGCTGTGTCTGAGTTCTaGAAAAGAACTGTCTGTACTGAGATCTACCAGAAC +
Preference number: 6 (lower is better)
Translates to: LGQSDWDAVSEF*KRTVCTEIYQN
Trigger: GTTCTGGTAGATCTCAGTACAGACAGTTCTTTTCAAGAACTCAGACACAGCGTCCCAATCTGATTGGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TCTTCAGTCTCAGTGGATATAGATGGTACCTTGGGCTaGTGCCATGATATCTGTAGCCGACGGTCTTTAAAT +
Preference number: 6 (lower is better)
Translates to: SSVSVDIDGTLG*CHDICSRRSLN
Trigger: ATTTAAAGACCGTCGGCTACAGATATCATGGCACAAGCCCAAGGTACCATCTATATCCACTGAGACTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp CTCTGGTTACCACCTGCATGTCCAAGACGATGTTTAACAGGAACTTaGTTAAGAACATATGCACCTGATGTCTGTGGTTTGCTCATCATC +
Preference number: 6 (lower is better)
Translates to: LWLPPACPRRCLTGT*LRTYAPDVCGLLII
Trigger: GATGATGAGCAAACCACAGACATCAGGTGCATATGTTCTTAACAAAGTTCCTGTTAAACATCGTCTTGGACATGCAGGTGGTAACCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS TCA 72 bp GAAAATATCTGGCAATCTTCTCCAGCACCACCAGACTaGTTCAACAAATGTGATGCATCACTCTGGTTACCA +
Preference number: 6 (lower is better)
Translates to: ENIWQSSPAPPD*FNKCDASLWLP
Trigger: TGGTAACCAGAGTGATGCATCACATTTGTTGAATCAGTCTGGTGGTGCTGGAGAAGATTGCCAGATATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS GCA 72 bp GAGGACTGTAGTGTCGGTTGCTCATTATTTTCCCTATaGCACAAGACTCGAATGAATCGGTTGTTTAGAACT +
Preference number: 6 (lower is better)
Translates to: EDCSVGCSLFSL*HKTRMNRLFRT
Trigger: AGTTCTAAACAACCGATTCATTCGAGTCTTGTGGCATAGGGAAAATAATGAGCAACCGACACTACAGTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS CCA 72 bp TCTGGTTATGTTGCTATTAATCGAAACAGGAACTGGTaGTTCAGTCTGGATCACAATGTTAGCAGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SGYVAINRNRNW*FSLDHNVSSSW
Trigger: CCAAGAGCTGCTAACATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp CCACCTGCATGTCCAAGACGATGTTTAACAGGAACTTaGTTAAGAACATATGCACCTGATGTCTGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: PPACPRRCLTGT*LRTYAPDVCGL
Trigger: CAAACCACAGACATCAGGTGCATATGTTCTTAACAAAGTTCCTGTTAAACATCGTCTTGGACATGCAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp TCCTTGACTTCTTCTTCTTCAGTCTCAGTGGATATAGATGGTACCTaGGGCTTGTGCCATGATATCTGTAGCCGACGGTCTTTAAATTTT +
Preference number: 6 (lower is better)
Translates to: SLTSSSSVSVDIDGT*GLCHDICSRRSLNF
Trigger: AAAATTTAAAGACCGTCGGCTACAGATATCATGGCACAAGCCCAAGGTACCATCTATATCCACTGAGACTGAAGAAGAAGAAGTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp TTGCTATTAATCGAAACAGGAACTGGTGGTTCAGTCTaGATCACAATGTTAGCAGCTCTTGGATTTACATCC +
Preference number: 6 (lower is better)
Translates to: LLLIETGTGGSV*ITMLAALGFTS
Trigger: GGATGTAAATCCAAGAGCTGCTAACATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp TACTCTGGTTATGTTGCTATTAATCGAAACAGGAACTaGTGGTTCAGTCTGGATCACAATGTTAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: YSGYVAINRNRN*WFSLDHNVSSS
Trigger: AGAGCTGCTAACATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp AAAATCCTCTTTCATCATAATCTCTGCATCGCCTCTTaGGTGGTAGGTTTCGACCAAAAGAATTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: KILFHHNLCIAS*VVGFDQKNWKS
Trigger: GCTCTTCCAATTCTTTTGGTCGAAACCTACCACCAAAGAGGCGATGCAGAGATTATGATGAAAGAGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp CAAGTACACAAAATCCTCTTTCATCATAATCTCTGCATCGCCTCTTaGGTGGTAGGTTTCGACCAAAAGAATTGGAAGAGCTATGATTGT +
Preference number: 6 (lower is better)
Translates to: QVHKILFHHNLCIAS*VVGFDQKNWKSYDC
Trigger: ACAATCATAGCTCTTCCAATTCTTTTGGTCGAAACCTACCACCAAAGAGGCGATGCAGAGATTATGATGAAAGAGGATTTTGTGTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 90 bp ATAGCTCTTTTTCGACTATCTGGTTCAAGAACTACTCTGGTTATGTaGCTATTAATCGAAACAGGAACTGGTGGTTCAGTCTGGATCACA +
Preference number: 6 (lower is better)
Translates to: IALFRLSGSRTTLVM*LLIETGTGGSVWIT
Trigger: TGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGAGTAGTTCTTGAACCAGATAGTCGAAAAAGAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TTTCGACTATCTGGTTCAAGAACTACTCTGGTTATGTaGCTATTAATCGAAACAGGAACTGGTGGTTCAGTC +
Preference number: 6 (lower is better)
Translates to: FRLSGSRTTLVM*LLIETGTGGSV
Trigger: GACTGAACCACCAGTTCCTGTTTCGATTAATAGCAACATAACCAGAGTAGTTCTTGAACCAGATAGTCGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CAA 72 bp TTATTTTCCCTATGCCACAAGACTCGAATGAATCGGTaGTTTAGAACTGCTTCTGTGCTAGAAATGGCTTTC +
Preference number: 6 (lower is better)
Translates to: LFSLCHKTRMNR*FRTASVLEMAF
Trigger: GAAAGCCATTTCTAGCACAGAAGCAGTTCTAAACAACCGATTCATTCGAGTCTTGTGGCATAGGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265271.7
ENST00000508019.1
CDS TCA 72 bp ATGTTTAACAGGAACTTTGTTAAGAACATATGCACCTaGTGTCTGTGGTTTGCTCATCATCTTCTGGATACC +
Preference number: 6 (lower is better)
Translates to: MFNRNFVKNICT*CLWFAHHLLDT
Trigger: GGTATCCAGAAGATGATGAGCAAACCACAGACATCAGGTGCATATGTTCTTAACAAAGTTCCTGTTAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265271.7
CDS CCA 72 bp CCCTTCCAAACCACTCATAGCTCTTTTTCGACTATCTaGTTCAAGAACTACTCTGGTTATGTTGCTATTAAT +
Preference number: 6 (lower is better)
Translates to: PFQTTHSSFSTI*FKNYSGYVAIN
Trigger: ATTAATAGCAACATAACCAGAGTAGTTCTTGAACCAGATAGTCGAAAAAGAGCTATGAGTGGTTTGGAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265271.7