Pregenerated sensors for RBM22 (Homo sapiens)
Ensembl gene IDs: ENSG00000086589Ensembl transcript IDs: ENST00000199814.9, ENST00000520132.1, ENST00000521464.1, ENST00000521594.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTGAATGCTaGAGACCATCAGAGTCCCAGCAGGAGGTCACGTCTTTCATTCAG | + |
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Preference number: 1 (lower is better) Translates to: SRDDNETLKTHEGEC*RPSESQQEVTSFIQ Trigger: CTGAATGAAAGACGTGACCTCCTGCTGGGACTCTGATGGTCTTCAGCATTCACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACACTGTCAGTCTCTGACTaGTCACATCTGAGCACATTC | + |
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Preference number: 2 (lower is better) Translates to: AGHSNSLICVSPTRVRGTLSVSD*SHLSTF Trigger: GAATGTGCTCAGATGTGAGCAGTCAGAGACTGACAG...TGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR TCA 90 bp | TGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACAGGGGTCCATCGATCCTTTaGACAAGTATAGGAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: WTFQFTHLRVPHTGKGNRGPSIL*TSIGKH Trigger: ATGCTTTCCTATACTTGTTCAAAGGATCGATGGACC...CCTGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTTCCAATTCACTCATCTaGGTGTCCCCCACACGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LRPNRSRDDNETLKTHEGSNSLI*VSPTRV Trigger: TACCCGTGTGGGGGACACGCAGATGAGTGAATTGGA...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTGGGCTGTGCTGGTGCTaGTTTCTACTCATCTTTCGG | + |
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Preference number: 2 (lower is better) Translates to: LRPNRSRDDNETLKTHEGGLCWC*FLLIFR Trigger: CCGAAAGATGAGTAGAAACCAGCACCAGCACAGCCC...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTAGGAAAGAGAAGATCTaGGCTGTGCTGGTGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LRPNRSRDDNETLKTHEGRKEKI*AVLVLV Trigger: AACCAGCACCAGCACAGCCCAGATCTTCTCTTTCCT...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCATGGCTGTCAGTCTCTaGCTGCTCACATCTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FFTVISCQTPGFFDGTQLMAVSL*LLTSEH Trigger: GTGCTCAGATGTGAGCAGTCAGAGACTGACAGCCAT...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCAAGTATAGGAAAGCATaGCTGTCAGTCTCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: FFTVISCQTPGFFDGTQLKYRKA*LSVSDC Trigger: GCAGTCAGAGACTGACAGCCATGCTTTCCTATACTT...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTTTTACAGTAATTTCATaGCAGACACCAGGTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRPNRSRDDNETLKTHEGFTVIS*QTPGFF Trigger: GAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAA...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACACGGTCCATCGATCCTTaGAACAAGTATAGGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: AGHSNSLICVSPTRVRGTRSIDP*NKYRKA Trigger: TGCTTTCCTATACTTGTTCAAAGGATCGATGGACCG...TGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| 3UTR TCA 72 bp | GACAATGAGACACTGAAGACACACGAAGGTGAATGCTaGAGACCATCAGAGTCCCAGCAGGAGGTCACGTCT | + |
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Preference number: 3 (lower is better) Translates to: DNETLKTHEGEC*RPSESQQEVTS Trigger: AGACGTGACCTCCTGCTGGGACTCTGATGGTCTTCAGCATTCACCTTCGTGTGTCTTCAGTGTCTCATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | AGAGTCCCAGCAGGAGGTCACGTCTTTCATTCAGACGCTCCAATGCTTTTCATTGTCCTGGAGCCCGCATaGAAGGAGGGGGTGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RVPAGGHVFHSDAPMLFIVLEPA*KEGVVP Trigger: TGGGACCACCCCCTCCTTTCATGCGGGCTCCAGGAC...AATGAAAAGCATTGGAGCGTCTGAATGAAAGACGTGACCTCCTGCTGGGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACAGGCACGAAGGTGAATGCTaGAGACCATCAGAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WTFQFTHLRVPHTGKGNRHEGEC*RPSESQ Trigger: CTGGGACTCTGATGGTCTTCAGCATTCACCTTCGTG...CCTGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | GCTGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACAAGAAGGATAGTGGATTaGTCCTGGAGCCCGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: AGHSNSLICVSPTRVRGTRRIVD*SWSPHE Trigger: TTCATGCGGGCTCCAGGACCAATCCACTATCCTTCT...TGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TGGACATTCCAATTCACTCATCTGCGTGTCCCCCACACGGGTAAGGGGAACAGGGAAGACACACGAAGGTaGATGCTGAAGACCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: WTFQFTHLRVPHTGKGNREDTRR*MLKTIR Trigger: TCTGATGGTCTTCAGCATTCACCTTCGTGTGTCTTC...CCTGTTCCCCTTACCCGTGTGGGGGACACGCAGATGAGTGAATTGGAATGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCAGAGCCCCAGAGTGGTaGCAAGGTGCTAGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLRAPEW*QGARGC Trigger: GCAGCCCCTAGCACCTTGTCACCACTCTGGGGCTCT...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTCACTTGGGGGCAAGTTaGAGTAGTTGGCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRPNRSRDDNETLKTHEGHLGAS*SSWQRL Trigger: AAGCCTCTGCCAACTACTTCAACTTGCCCCCAAGTG...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCCCAGCAGGAGGTCACGTCTTTCATTCAGACGCTCCAATGCTTTTCATTAGAAGATCTGGGCTGTaGTGGTGCTGGTTTCTACTC | + |
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Preference number: 4 (lower is better) Translates to: RVPAGGHVFHSDAPMLFIRRSGL*WCWFLL Trigger: GAGTAGAAACCAGCACCAGCACAGCCCAGATCTTCT...AATGAAAAGCATTGGAGCGTCTGAATGAAAGACGTGACCTCCTGCTGGGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | AGAGTCCCAGCAGGAGGTCACGTCTTTCATTCAGACGCTCCAATGCTTTTCATTGATAGTTTTATCCTCTaGTGGGTCCAGCCGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RVPAGGHVFHSDAPMLFIDSFIL*WVQPRH Trigger: ATGCCTCGGCTGGACCCACCAGAGGATAAAACTATC...AATGAAAAGCATTGGAGCGTCTGAATGAAAGACGTGACCTCCTGCTGGGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAAGAGGCTTCTTCTTCTaGTGCAGGAGGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHERGFFF*CRRRRK Trigger: CTTCCTCCTCCTCCTGCAGCAGAAGAAGAAGCCTCT...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAACATGAAAGGAGGGGGTaGTCCCATTGGGTGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEHERRG*SHWVEH Trigger: ATGTTCCACCCAATGGGACCACCCCCTCCTTTCATG...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGGCTGTGCTGGTGCTaGTTTCTACTCATCTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEGLCWC*FLLIFR Trigger: CCGAAAGATGAGTAGAAACCAGCACCAGCACAGCCC...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCTCCAATTCACTCATCTaGGTGTCCCCCACACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLSNSLI*VSPTRV Trigger: TACCCGTGTGGGGGACACGCAGATGAGTGAATTGGA...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAAGTTTTATCCTCTGGTaGGTCCAGCCGAGGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHESFILW*VQPRHC Trigger: ACAATGCCTCGGCTGGACCCACCAGAGGATAAAACT...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAAGGAAAGAGAAGATCTaGGCTGTGCTGGTGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHERKEKI*AVLVLV Trigger: AACCAGCACCAGCACAGCCCAGATCTTCTCTTTCCT...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAACTGTCAGTCTCTGACTaGTCACATCTGAGCACATTC | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHELSVSD*SHLSTF Trigger: GAATGTGCTCAGATGTGAGCAGTCAGAGACTGACAG...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCTCTGGGCTGTGCTGGTaGTGGTTTCTACTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLSGLCW*WFLLIF Trigger: AAAGATGAGTAGAAACCAGCACCAGCACAGCCCAGA...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAAAGTATAGGAAAGCATaGCTGTCAGTCTCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEKYRKA*LSVSDC Trigger: GCAGTCAGAGACTGACAGCCATGCTTTCCTATACTT...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAACAGCTACAGGATCATTaGTTCCGTAATAACGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEQLQDH*FRNNGL Trigger: AAGACCGTTATTACGGAATCAATGATCCTGTAGCTG...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCGGTCCATCGATCCTTTaGACAAGTATAGGAAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLGPSIL*TSIGKH Trigger: ATGCTTTCCTATACTTGTTCAAAGGATCGATGGACC...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCATGACAATGAGACACTaGAGACACACGAAGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLMTMRH*RHTKVN Trigger: ATTCACCTTCGTGTGTCTTCAGTGTCTCATTGTCAT...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAATTTCACATTCAGTCTaGGGCCATTTACAATCAACT | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEISHSV*GHLQST Trigger: AGTTGATTGTAAATGGCCGCAGACTGAATGTGAAAT...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR GCA 90 bp | ACTCTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAATTTACAGTAATTTCATaGCAGACACCAGGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TLRPNRSRDDNETLKTHEFTVIS*QTPGFF Trigger: GAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAA...TTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR TCA 90 bp | TTCTTTACAGTAATTTCATGCCAGACACCAGGTTTCTTCGATGGTACACAGCTCTATAGTACTCTTTGTTaGCATCTGACTTTGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: FFTVISCQTPGFFDGTQLYSTLC*HLTLAC Trigger: ACATGCCAAAGTCAGATGTCAACAAAGAGTACTATA...GAGCTGTGTACCATCGAAGAAACCTGGTGTCTGGCATGAAATTACTGTAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS CCA 90 bp | GATCGCCCTCCGCCCTCCTGCTCCGGCCAAGCTAGGCCGCCGCGCTaGCTCCTCCCCGGTATTCCTTCGGCCGCGCCGCAGGCCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: DRPPPSCSGQARPPR*LLPGIPSAAPQALS Trigger: GGACAGGGCCTGCGGCGCGGCCGAAGGAATACCGGGGAGGAGCCAGCGCGGCGGCCTAGCTTGGCCGGAGCAGGAGGGCGGAGGGCGATC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS GCA 90 bp | AGCCCCCTCCCTTCAAGCCCGCAGGAGGATCGCCCTCCGCCCTCCTaGTCCGGCCAAGCTAGGCCGCCGCGCTGGCTCCTCCCCGGTATT | + |
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Preference number: 5 (lower is better) Translates to: SPLPSSPQEDRPPPS*SGQARPPRWLLPGI Trigger: AATACCGGGGAGGAGCCAGCGCGGCGGCCTAGCTTGGCCGGAGCAGGAGGGCGGAGGGCGATCCTCCTGCGGGCTTGAAGGGAGGGGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS CCA 90 bp | AGGCTGGAGGGGGCAGGGATGGAAAGGGTGCTGGTCCCGGGACCCTaGCTAAGCCCCCTCCCTTCAAGCCCGCAGGAGGATCGCCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: RLEGAGMERVLVPGP*LSPLPSSPQEDRPP Trigger: CGGAGGGCGATCCTCCTGCGGGCTTGAAGGGAGGGGGCTTAGCCAGGGTCCCGGGACCAGCACCCTTTCCATCCCTGCCCCCTCCAGCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS TCA 90 bp | TCTGGCACAGAATGGGGAAGTCCTGGTGAAAATGGGAAATCTGGTTaGGGACCACCCTCCGAAGACCCTGACACCTCAGTGACACTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SGTEWGSPGENGKSG*GPPSEDPDTSVTLG Trigger: CCCAAGTGTCACTGAGGTGTCAGGGTCTTCGGAGGGTGGTCCTCAACCAGATTTCCCATTTTCACCAGGACTTCCCCATTCTGTGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521464.1 ENST00000521594.1 |
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| CDS-3UTR CAA 90 bp | AGAGTCCCAGCAGGAGGTCACGTCTTTCATTCAGACGCTCCAATGCTTTTCATTGCTGTAGCTTCCGAATaGGGAGAGAGGACCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: RVPAGGHVFHSDAPMLFIAVASE*GERTAT Trigger: TGTGGCGGTCCTCTCTCCCAATTCGGAAGCTACAGC...AATGAAAAGCATTGGAGCGTCTGAATGAAAGACGTGACCTCCTGCTGGGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS-3UTR CAA 90 bp | CTAAGACCAAACAGAAGCAGGGATGACAATGAGACACTGAAGACACACGAAGGTGGTCCAGCCGAGGCATaGTTGAAGCCCGCTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LRPNRSRDDNETLKTHEGGPAEA*LKPALE Trigger: TTCTAAAGCGGGCTTCAACAATGCCTCGGCTGGACC...ACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGGTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199814.9 |
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| CDS GCA 90 bp | AGTTTAAAACAAGAATACGTGACAGAGACTGCATGTGGCCCACAATaGCTAAAATATTCACCATCCAGCCTCTTACAGCGAAAGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SLKQEYVTETACGPQ*LKYSPSSLLQRKSA Trigger: GGCAGACTTTCGCTGTAAGAGGCTGGATGGTGAATATTTTAGGCATTGTGGGCCACATGCAGTCTCTGTCACGTATTCTTGTTTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520132.1 |
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| CDS CCA 90 bp | GAGCCAAGAAAGTTTAAAACAAGAATACGTGACAGAGACTGCATGTaGCCCACAATGCCTAAAATATTCACCATCCAGCCTCTTACAGCG | + |
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Preference number: 5 (lower is better) Translates to: EPRKFKTRIRDRDCM*PTMPKIFTIQPLTA Trigger: CGCTGTAAGAGGCTGGATGGTGAATATTTTAGGCATTGTGGGCCACATGCAGTCTCTGTCACGTATTCTTGTTTTAAACTTTCTTGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520132.1 |
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| CDS CCA 72 bp | CCGCCCTCCTGCTCCGGCCAAGCTAGGCCGCCGCGCTaGCTCCTCCCCGGTATTCCTTCGGCCGCGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PPSCSGQARPPR*LLPGIPSAAPQ Trigger: CTGCGGCGCGGCCGAAGGAATACCGGGGAGGAGCCAGCGCGGCGGCCTAGCTTGGCCGGAGCAGGAGGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS GCA 72 bp | CCTTCAAGCCCGCAGGAGGATCGCCCTCCGCCCTCCTaGTCCGGCCAAGCTAGGCCGCCGCGCTGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSSPQEDRPPPS*SGQARPPRWLL Trigger: GAGGAGCCAGCGCGGCGGCCTAGCTTGGCCGGAGCAGGAGGGCGGAGGGCGATCCTCCTGCGGGCTTGAAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS GCA 72 bp | CCCGGTATTCCTTCGGCCGCGCCGCAGGCCCTGTCCTaGCAGCTTGCAAGGTGCGCGGCTTCGCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGIPSAAPQALS*QLARCAASPPP Trigger: AGGAGGAGGCGAAGCCGCGCACCTTGCAAGCTGGCAGGACAGGGCCTGCGGCGCGGCCGAAGGAATACCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS CAA 72 bp | TTCCTTCGGCCGCGCCGCAGGCCCTGTCCTGCCAGCTaGCAAGGTGCGCGGCTTCGCCTCCTCCTTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: FLRPRRRPCPAS*QGARLRLLLPS Trigger: GGATGGAAGGAGGAGGCGAAGCCGCGCACCTTGCAAGCTGGCAGGACAGGGCCTGCGGCGCGGCCGAAGGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS CCA 72 bp | GGGGCAGGGATGGAAAGGGTGCTGGTCCCGGGACCCTaGCTAAGCCCCCTCCCTTCAAGCCCGCAGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: GAGMERVLVPGP*LSPLPSSPQED Trigger: ATCCTCCTGCGGGCTTGAAGGGAGGGGGCTTAGCCAGGGTCCCGGGACCAGCACCCTTTCCATCCCTGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521464.1 |
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| CDS TCA 72 bp | TGGGAAATCTGGTTGAGGACCACCCTCCGAAGACCCTaGCACCTCAGTGACACTTGGGGTGGCGAGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: WEIWLRTTLRRP*HLSDTWGGEGA Trigger: CGCCCCCTCGCCACCCCAAGTGTCACTGAGGTGTCAGGGTCTTCGGAGGGTGGTCCTCAACCAGATTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000521464.1 ENST00000521594.1 |
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| CDS TCA 72 bp | GAATGGGGAAGTCCTGGTGAAAATGGGAAATCTGGTTaGGGACCACCCTCCGAAGACCCTGACACCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: EWGSPGENGKSG*GPPSEDPDTSV Trigger: CACTGAGGTGTCAGGGTCTTCGGAGGGTGGTCCTCAACCAGATTTCCCATTTTCACCAGGACTTCCCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000521464.1 ENST00000521594.1 |
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