Pregenerated sensors for RBM17 (Homo sapiens)
Ensembl gene IDs: ENSG00000134453Ensembl transcript IDs: ENST00000379888.9, ENST00000446108.5, ENST00000496762.1
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGTCACATaGAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATT | + |
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Preference number: 1 (lower is better) Translates to: TARARVFQLPLRKVT*SIWESKEQNTGMSI Trigger: AATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 90 bp | AGGCACACACCAAGCTGTCCTCATGCGAACGGAAATCAAGTAGTATaGGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: RHTPSCPHANGNQVV*VGCNSLVADHENVR Trigger: CCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTCATACTACTTGATTTCCGTTCGCATGAGGACAGCTTGGTGTGTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR GCA 90 bp | TGTCATAATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTaGCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: CHNNQRRQHGLESFS*RLGKSHAVFGKARN Trigger: GTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATTATGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 90 bp | AAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATaGGTATTTTCTGGAAATACCTCCTGCCCTGGCAATGAACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: KSHAVFGKARNRTQA*VFSGNTSCPGNEPQ Trigger: CTGAGGTTCATTGCCAGGGCAGGAGGTATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 90 bp | TTCTATACCCACATACTCCATAAATCCATCACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATGATTCATCCAATAGGCCATGGTATG | + |
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Preference number: 1 (lower is better) Translates to: FYTHILHKSITNPTV*FSLRQMIHPIGHGM Trigger: CATACCATGGCCTATTGGATGAATCATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGTGATGGATTTATGGAGTATGTGGGTATAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR GCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGTCTGGAAATACCTCCTaGCCTGGCAATGAACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NNQRRQHGLESFSCRLGKSGNTS*PGNEPQ Trigger: CTGAGGTTCATTGCCAGGGCAGGAGGTATTTCCAGA...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGTTGCCAGTAGAAACATaGCCCCAAGGAACTGCCATT | + |
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Preference number: 2 (lower is better) Translates to: NNQRRQHGLESFSCRLGKLPVET*PQGTAI Trigger: AATGGCAGTTCCTTGGGGTCATGTTTCTACTGGCAA...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACATCTGGAAATACCTCCTaGCCTGGCAATGAACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPLRKVTCSIWESKEQNTSGNTS*PGNEPQ Trigger: CTGAGGTTCATTGCCAGGGCAGGAGGTATTTCCAGA...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCGGCATGAGTATTTTCTaGAAATACCTCCTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ELVATLWLLTMRMLGKATGMSIF*KYLLPW Trigger: CCAGGGCAGGAGGTATTTCCAGAAAATACTCATGCC...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTTTGCCAGTAGAAACATaGCCCCAAGGAACTGCCATT | + |
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Preference number: 2 (lower is better) Translates to: GCNSLVADHENVRKSHPFLPVET*PQGTAI Trigger: AATGGCAGTTCCTTGGGGTCATGTTTCTACTGGCAA...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCCTCCTGCCCTGGCAATaGACCTCAGTACCAAATATT | + |
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Preference number: 2 (lower is better) Translates to: NSLVADHENVRKSHPFRCLLPWQ*TSVPNI Trigger: AATATTTGGTACTGAGGTTCATTGCCAGGGCAGGAG...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: NSLVADHENVRKSHPFRCTNPTV*FSLRQM Trigger: CATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGT...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: VATLWLLTMRMLGKATHLTNPTV*FSLRQM Trigger: CATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGT...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAGCACCTGCTAGGTTTTaGATTCATTTGTCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LPLRKVTCSIWESKEQNTAPARF*IHLSFL Trigger: CAGAAATGACAAATGAATTCAAAACCTAGCAGGTGC...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAACAGAACACAGGCATaGGTATTTTCTGGAAATACC | + |
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Preference number: 2 (lower is better) Translates to: GCNSLVADHENVRKSHPFNRTQA*VFSGNT Trigger: GGTATTTCCAGAAAATACTCATGCCTGTGTTCTGTT...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATTTCCAGGGCTGCTTTTaGTTCTGTCTTCCACAATGT | + |
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Preference number: 2 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNFQGCF*FCLPQC Trigger: ACATTGTGGAAGACAGAATCAAAAGCAGCCCTGGAA...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCCATCATTTTCACCTTTaGCACACTGCCAAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: NSLVADHENVRKSHPFRCHHFHL*HTAKMI Trigger: TATCATCTTGGCAGTGTGCCAAAGGTGAAAATGATG...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAAACCAAGTCCATGGATaGAAAGAAATGCTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VATLWLLTMRMLGKATHLNQVHG*KEMLSS Trigger: AGAACTCAGCATTTCTTTGCATCCATGGACTTGGTT...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTACATCATTTTCACCTTTaGCACACTGCCAAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: VATLWLLTMRMLGKATHLHHFHL*HTAKMI Trigger: TATCATCTTGGCAGTGTGCCAAAGGTGAAAATGATG...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACATCATCCAATAGGCCATaGTATGTTCACAATTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LPLRKVTCSIWESKEQNTSSNRP*YVHNSS Trigger: TGAAGAATTGTGAACATACCATGGCCTATTGGATGA...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATGGCACACTGCCAAGATaGTACTTTACTACAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNGTLPR*YFTTEF Trigger: AAATTCTGTAGTAAAGTATCATCTTGGCAGTGTGCC...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAAGCCACACATCCTACTaGACTTCAATGATACAATTT | + |
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Preference number: 2 (lower is better) Translates to: VATLWLLTMRMLGKATHLSHTSY*TSMIQF Trigger: AAATTGTATCATTGAAGTTCAGTAGGATGTGTGGCT...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTATCATCCAATAGGCCATaGTATGTTCACAATTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VATLWLLTMRMLGKATHLSSNRP*YVHNSS Trigger: TGAAGAATTGTGAACATACCATGGCCTATTGGATGA...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTGTCACATGCAGTATTTaGGAAAGCAAGGAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTVTCSI*ESKEQN Trigger: GTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGAC...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATATCACCTTTGGCACACTaGCAAGATGATACTTTACTA | + |
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Preference number: 2 (lower is better) Translates to: QYLGKQGTEHRHEYFLEISPLAH*QDDTLL Trigger: TAGTAAAGTATCATCTTGGCAGTGTGCCAAAGGTGA...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAGCAGTACAGTTTACTTaGCCAACGTGGATAATCTTA | + |
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Preference number: 2 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIAVQFT*PTWIIL Trigger: TAAGATTATCCACGTTGGCCAAGTAAACTGTACTGC...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTTGGAACCATTAGGCACACTGCCAAGATaGTACTTTACTACAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: LQSITTINACMKGGLEPLGTLPR*YFTTEF Trigger: AAATTCTGTAGTAAAGTATCATCTTGGCAGTGTGCC...TAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR GCA 90 bp | TTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTTGGAACCATTATCACCTTTGGCACACTaGCAAGATGATACTTTACTA | + |
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Preference number: 2 (lower is better) Translates to: LQSITTINACMKGGLEPLSPLAH*QDDTLL Trigger: TAGTAAAGTATCATCTTGGCAGTGTGCCAAAGGTGA...TAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR CAA 90 bp | GTTTTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTaGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACT | + |
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Preference number: 2 (lower is better) Translates to: VLQSITTINACMKGG*EPLVSKIKQAHSGT Trigger: AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 72 bp | CCAAGCTGTCCTCATGCGAACGGAAATCAAGTAGTATaGGTTGGTTGCAACTCTCTGGTTGCTGACCATGAG | + |
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Preference number: 3 (lower is better) Translates to: PSCPHANGNQVV*VGCNSLVADHE Trigger: CTCATGGTCAGCAACCAGAGAGTTGCAACCAACTCATACTACTTGATTTCCGTTCGCATGAGGACAGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR GCA 72 bp | AGACTGGGGAGAAAGGCACACACCAAGCTGTCCTCATaGGAACGGAAATCAAGTAGTATGAGTTGGTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: RLGRKAHTKLSS*ERKSSSMSWLQ Trigger: TTGCAACCAACTCATACTACTTGATTTCCGTTCGCATGAGGACAGCTTGGTGTGTGCCTTTCTCCCCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGAGAAATGCTGCATCATaGAAGCACTTGAGAATTACC | + |
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Preference number: 3 (lower is better) Translates to: NNQRRQHGLESFSCRLGKRNAAS*KHLRIT Trigger: GGTAATTCTCAAGTGCTTCAATGATGCAGCATTTCT...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 72 bp | GCAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATaGGTATTTTCTGGAAATACCTCCTGCCCTGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: AVFGKARNRTQA*VFSGNTSCPGN Trigger: ATTGCCAGGGCAGGAGGTATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGTCACATGCAGTATTaGGGAAAGCAAGGAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: GCNSLVADHENVRKSHPFSHMQY*GKQGTE Trigger: TTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACT...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCAAACATGGTTTCCACTaGAGGAATGGTATGCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: ELVATLWLLTMRMLGKATKHGFH*RNGMPN Trigger: ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTT...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCGCATCATTGAAGCACTaGAGAATTACCATGAAATCT | + |
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Preference number: 3 (lower is better) Translates to: ELVATLWLLTMRMLGKATASLKH*RITMKS Trigger: AGATTTCATGGTAATTCTCAAGTGCTTCAATGATGC...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAAGAAATGCTGCATCATaGAAGCACTTGAGAATTACC | + |
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Preference number: 3 (lower is better) Translates to: LPLRKVTCSIWESKEQNTRNAAS*KHLRIT Trigger: GGTAATTCTCAAGTGCTTCAATGATGCAGCATTTCT...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATGGCAGTACAGTTTACTaGGCCAACGTGGATAATCTT | + |
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Preference number: 3 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNGSTVY*ANVDNL Trigger: AAGATTATCCACGTTGGCCAAGTAAACTGTACTGCC...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTGCATCATTGAAGCACTaGAGAATTACCATGAAATCT | + |
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Preference number: 3 (lower is better) Translates to: GCNSLVADHENVRKSHPFASLKH*RITMKS Trigger: AGATTTCATGGTAATTCTCAAGTGCTTCAATGATGC...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAAATTCCAGAATTCTATaGGCAGTACAGTTTACTTGG | + |
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Preference number: 3 (lower is better) Translates to: LPLRKVTCSIWESKEQNTNSRIL*AVQFTW Trigger: CCAAGTAAACTGTACTGCCAATAGAATTCTGGAATT...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR TCA 72 bp | CACATACTCCATAAATCCATCACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATGATTCATCCAATAGGC | + |
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Preference number: 3 (lower is better) Translates to: HILHKSITNPTV*FSLRQMIHPIG Trigger: GCCTATTGGATGAATCATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGTGATGGATTTATGGAGTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTAATTCCAGAATTCTATaGGCAGTACAGTTTACTTGG | + |
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Preference number: 3 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTNSRIL*AVQFTW Trigger: CCAAGTAAACTGTACTGCCAATAGAATTCTGGAATT...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR TCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGCGCCCACCCTTCGCTaGGTCCTCAGGGCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: VATLWLLTMRMLGKATHLAPTLR*VLRALG Trigger: GCCGAGCGCCCTGAGGACTCAGCGAAGGGTGGGCGC...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379888.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTCTGCACTCCCAGTTCTaGGACCCCGGGAGGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFLHSQF*DPGRNR Trigger: CCGGTTCCTCCCGGGGTCTCAGAACTGGGAGTGCAG...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS-3UTR TCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCGCCTGGGGTCGGACGTaGGCGCTGAAACACCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLVADHENVRKSHPFRCAWGRT*ALKHRS Trigger: TGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGC...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCGGCAGCTCCGGAGTCTaGGAAACGCCAACGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATGSSGV*ETPTSA Trigger: TGCAGACGTTGGCGTTTCTCAGACTCCGGAGCTGCC...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCAAACACCGCTCAAACTaGACGAGCCGAGGCGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLVADHENVRKSHPFRCKHRSN*TSRGDA Trigger: GGCGTCGCCTCGGCTCGTGCAGTTTGAGCGGTGTTT...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCGTCGGACGTGAGCGCTaGAACACCGCTCAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLVADHENVRKSHPFRCVGRER*NTAQTA Trigger: TGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGAC...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCTCTGGAAATACCTCCTaGCCTGGCAATGAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATSGNTS*PGNEPQ Trigger: CTGAGGTTCATTGCCAGGGCAGGAGGTATTTCCAGA...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACACAGAAACCAAACTCCTaGAAGCAGGGGCAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTQKPNS*KQGQNL Trigger: GAGGTTCTGCCCCTGCTTGCAGGAGTTTGGTTTCTG...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGATCAGAATCTGGATCTaGTCTCCTTGCAAACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NNQRRQHGLESFSCRLGKIRIWI*SPCKPT Trigger: AGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGAT...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCTCCTGCCCTGGCAATaGACCTCAGTACCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATLLPWQ*TSVPNI Trigger: AATATTTGGTACTGAGGTTCATTGCCAGGGCAGGAG...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTGCGAAGCTCAAAGACTaGCTGGGGTCGGACGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTAKLKD*LGSDVS Trigger: GCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGC...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTCTCGCTTCAGGTCAATaGCTGGGGCGAGGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTLASGQ*LGRGLY Trigger: GTACAGTCCTCGCCCCAGTCATTGACCTGAAGCGAG...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGGCACCTGCTAGGTTTTaGATTCATTTGTCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNQRRQHGLESFSCRLGKAPARF*IHLSFL Trigger: CAGAAATGACAAATGAATTCAAAACCTAGCAGGTGC...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACATTGCCAGTAGAAACATaGCCCCAAGGAACTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTLPVET*PQGTAI Trigger: AATGGCAGTTCCTTGGGGTCATGTTTCTACTGGCAA...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTCTCCTGCCCTGGCAATaGACCTCAGTACCAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFLLPWQ*TSVPNI Trigger: AATATTTGGTACTGAGGTTCATTGCCAGGGCAGGAG...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGAATTCCATAGATAACTaGAGTTCCAGGGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNQRRQHGLESFSCRLGKNSIDN*SSRAAF Trigger: AAAAGCAGCCCTGGAACTTCAGTTATCTATGGAATT...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGAACATGGTTTCCACTTaGGGAATGGTATGCCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NNQRRQHGLESFSCRLGKNMVST*GMVCLI Trigger: AATTAGGCATACCATTCCTCAAGTGGAAACCATGTT...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTTGGATCTGGTCTCCTTaGAAACCCACTTGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFWIWSP*KPTCFM Trigger: CATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCA...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCGGCATGAGTATTTTCTaGAAATACCTCCTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLVADHENVRKSHPFRCGMSIF*KYLLPW Trigger: CCAGGGCAGGAGGTATTTCCAGAAAATACTCATGCC...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTTNPTV*FSLRQM Trigger: CATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGT...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGCATGAGTATTTTCTaGAAATACCTCCTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VATLWLLTMRMLGKATHLGMSIF*KYLLPW Trigger: CCAGGGCAGGAGGTATTTCCAGAAAATACTCATGCC...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCTGCATGCATGAAAGGTaGGTTGGAACCATTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATCMHER*VGTISF Trigger: GAAACTAATGGTTCCAACCCACCTTTCATGCATGCA...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | ATGATACAATTTCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCTCGCTTCAGGTCAATaGCTGGGGCGAGGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MIQFLTIPEFYWQYSLLGLASGQ*LGRGLY Trigger: GTACAGTCCTCGCCCCAGTCATTGACCTGAAGCGAG...GCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGAAATTGTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCGCACCTGCTAGGTTTTaGATTCATTTGTCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATAPARF*IHLSFL Trigger: CAGAAATGACAAATGAATTCAAAACCTAGCAGGTGC...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGCATAACAACAATAAATaGATGCATGAAAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNQRRQHGLESFSCRLGKHNNNK*MHERWV Trigger: AACCCACCTTTCATGCATGCATTTATTGTTGTTATG...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAACCAAGCTGTCCTCATaGGAACGGAAATCAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VATLWLLTMRMLGKATHLTKLSS*ERKSSS Trigger: ACTACTTGATTTCCGTTCGCATGAGGACAGCTTGGT...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATCTGGGTTTTCACGCCTaGTTTCCCAGAAACCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNLGFHA*FPRNQT Trigger: AGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCCAG...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATACTTCCAGACCCCACTTaGGTTTCTCAAATCAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHNSRILLAVQFTWPTWILPDPT*VSQINP Trigger: CGGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAG...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTGTCACATGCAGTATTTaGGAAAGCAAGGAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFVTCSI*ESKEQN Trigger: GTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGAC...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACATCAAGTAGTATGAGTTaGTTGCAACTCTCTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTSSSMS*LQLSGC Trigger: GCAACCAGAGAGTTGCAACCAACTCATACTACTTGA...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAAAATCAACCCGGGCCTaGGTTTTCACGCCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIKSTRA*VFTPAF Trigger: GAAAGCAGGCGTGAAAACCCAGGCCCGGGTTGATTT...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAGGCACACTGCCAAGATaGTACTTTACTACAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTGTLPR*YFTTEF Trigger: AAATTCTGTAGTAAAGTATCATCTTGGCAGTGTGCC...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCGATGCAAAGAAATGCTaGGTTCTTGATACACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATDAKKC*VLDTLS Trigger: TGAAAGTGTATCAAGAACTCAGCATTTCTTTGCATC...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAAATTCCATAGATAACTaGAGTTCCAGGGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTNSIDN*SSRAAF Trigger: AAAAGCAGCCCTGGAACTTCAGTTATCTATGGAATT...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CAATTCTTCAATCTTATTCAGGTTGTAAAGACGTTTTTCTACGACTGGAGTCACGCTACTCGGTTCTGGTaGCCAGACAATTTCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFFNLIQVVKTFFYDWSHATRFW*PDNFVR Trigger: CCTGACGAAATTGTCTGGTCACCAGAACCGAGTAGC...GTGACTCCAGTCGTAGAAAAACGTCTTTACAACCTGAATAAGATTGAAGAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATCCTTGCAAACCCACTTaGTTCATGTCTGTCTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNPCKPT*FMSVFT Trigger: CGTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGG...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCACAACAATAAATGCATaGATGAAAGGTGGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATTTINA*MKGGLE Trigger: TTCCAACCCACCTTTCATGCATGCATTTATTGTTGT...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CAATTCTTCAATCTTATTCAGGTTGTAAAGACGTTTTTCTACGACTGGAGTCACAGAAACGCCAACGTCTaGACTCCCAGTTCTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QFFNLIQVVKTFFYDWSHRNANV*TPSSET Trigger: GGTCTCAGAACTGGGAGTGCAGACGTTGGCGTTTCT...GTGACTCCAGTCGTAGAAAAACGTCTTTACAACCTGAATAAGATTGAAGAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTCATCATTTTCACCTTTaGCACACTGCCAAGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFHHFHL*HTAKMI Trigger: TATCATCTTGGCAGTGTGCCAAAGGTGAAAATGATG...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAGCAGTACAGTTTACTTaGCCAACGTGGATAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLRKVTCSIWESKEQNTAVQFT*PTWIIL Trigger: TAAGATTATCCACGTTGGCCAAGTAAACTGTACTGC...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGTCACATGCAGTATTTaGGAAAGCAAGGAACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VATLWLLTMRMLGKATHLVTCSI*ESKEQN Trigger: GTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGAC...TAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCAGCCACACATCCTACTaGACTTCAATGATACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NSLVADHENVRKSHPFRCSHTSY*TSMIQF Trigger: AAATTGTATCATTGAAGTTCAGTAGGATGTGTGGCT...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTGATGCAAAGAAATGCTaGGTTCTTGATACACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCNSLVADHENVRKSHPFDAKKC*VLDTLS Trigger: TGAAAGTGTATCAAGAACTCAGCATTTCTTTGCATC...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATATGGATCTGGTCTCCTTaGAAACCCACTTGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIWIWSP*KPTCFM Trigger: CATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCA...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATAACAACAATAAATaGATGCATGAAAGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELVATLWLLTMRMLGKATHNNNK*MHERWV Trigger: AACCCACCTTTCATGCATGCATTTATTGTTGTTATG...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | ATGATACAATTTCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCTTCGTCAGGATGCGGTaGACGAGACGGAGAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MIQFLTIPEFYWQYSLLGFVRMR*TRRRRN Trigger: GTTTCTTCTCCGTCTCGTGCACCGCATCCTGACGAA...GCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGAAATTGTATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATAGAACCTCATTCCACCTaGATTCTCCGATCATTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SHNSRILLAVQFTWPTWIEPHST*ILRSLH Trigger: GTGTAATGATCGGAGAATGCAGGTGGAATGAGGTTC...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTACAAACCCTACAGTCTaGTTTAGCCTACGGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTTNPTV*FSLRQM Trigger: CATTTGCCGTAGGCTAAATCAGACTGTAGGGTTTGT...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATAACAGAACACAGGCATaGGTATTTTCTGGAAATACC | + |
|
Preference number: 4 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNNRTQA*VFSGNT Trigger: GGTATTTCCAGAAAATACTCATGCCTGTGTTCTGTT...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATATTCCAGGGCTGCTTTTaGTTCTGTCTTCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIFQGCF*FCLPQC Trigger: ACATTGTGGAAGACAGAATCAAAAGCAGCCCTGGAA...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATAGGAAATCAAGTAGTATaGGTTGGTTGCAACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHNSRILLAVQFTWPTWIGNQVV*VGCNSL Trigger: CAGAGAGTTGCAACCAACTCATACTACTTGATTTCC...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | ATGATACAATTTCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCTCTGGAAATACCTCCTaGCCTGGCAATGAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MIQFLTIPEFYWQYSLLGSGNTS*PGNEPQ Trigger: CTGAGGTTCATTGCCAGGGCAGGAGGTATTTCCAGA...GCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGAAATTGTATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAACCAAGCTGTCCTCATaGGAACGGAAATCAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEITKLSS*ERKSSS Trigger: ACTACTTGATTTCCGTTCGCATGAGGACAGCTTGGT...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTTGGAACCATTAACAATTTCGTCAGGATaGGGTGCACGAGACGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSITTINACMKGGLEPLTISSG*GARDGE Trigger: TTCTCCGTCTCGTGCACCGCATCCTGACGAAATTGT...TAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATCATCATTTTCACCTTTaGCACACTGCCAAGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNHHFHL*HTAKMI Trigger: TATCATCTTGGCAGTGTGCCAAAGGTGAAAATGATG...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATGCAGTACAGTTTACTTaGCCAACGTGGATAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNAVQFT*PTWIIL Trigger: TAAGATTATCCACGTTGGCCAAGTAAACTGTACTGC...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CAATTCTTCAATCTTATTCAGGTTGTAAAGACGTTTTTCTACGACTGGAGTCACTTCCAGGGCTGCTTTTaGTTCTGTCTTCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QFFNLIQVVKTFFYDWSHFQGCF*FCLPQC Trigger: ACATTGTGGAAGACAGAATCAAAAGCAGCCCTGGAA...GTGACTCCAGTCGTAGAAAAACGTCTTTACAACCTGAATAAGATTGAAGAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAGGAAATCAAGTAGTATaGGTTGGTTGCAACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIGNQVV*VGCNSL Trigger: CAGAGAGTTGCAACCAACTCATACTACTTGATTTCC...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CCA 90 bp | CAATTCTTCAATCTTATTCAGGTTGTAAAGACGTTTTTCTACGACTGGAGTCACATCAGAATCTGGATCTaGTCTCCTTGCAAACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QFFNLIQVVKTFFYDWSHIRIWI*SPCKPT Trigger: AGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGAT...GTGACTCCAGTCGTAGAAAAACGTCTTTACAACCTGAATAAGATTGAAGAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAGGCACACTGCCAAGATaGTACTTTACTACAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIGTLPR*YFTTEF Trigger: AAATTCTGTAGTAAAGTATCATCTTGGCAGTGTGCC...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGGGTTGGAACCATTAGTTTCTAAAATTAAACAAGCACACTCCGGTACTAACATGGTTTCCACTTaGGGAATGGTATGCCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KGGLEPLVSKIKQAHSGTNMVST*GMVCLI Trigger: AATTAGGCATACCATTCCTCAAGTGGAAACCATGTT...AGTACCGGAGTGTGCTTGTTTAATTTTAGAAACTAATGGTTCCAACCCACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTTGGAACCATTACCTTGCAAACCCACTTaGTTCATGTCTGTCTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: LQSITTINACMKGGLEPLPCKPT*FMSVFT Trigger: CGTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGG...TAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CAATTCTTCAATCTTATTCAGGTTGTAAAGACGTTTTTCTACGACTGGAGTCACAACCAAGTCCATGGATaGAAAGAAATGCTGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFFNLIQVVKTFFYDWSHNQVHG*KEMLSS Trigger: AGAACTCAGCATTTCTTTGCATCCATGGACTTGGTT...GTGACTCCAGTCGTAGAAAAACGTCTTTACAACCTGAATAAGATTGAAGAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR GCA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATAACAACAATAAATGCATaGATGAAAGGTGGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QYLGKQGTEHRHEYFLEITTINA*MKGGLE Trigger: TTCCAACCCACCTTTCATGCATGCATTTATTGTTGT...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS GCA 90 bp | CATTCCTGTCCCGGGCAGCTCCGGAGTCTGAGAAACGCCAACGTCTaGACTCCCAGTTCTGAGACCCCGGGAGGAACCGGCTCCGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSCPGQLRSLRNANV*TPSSETPGGTGSEP Trigger: GGGCTCGGAGCCGGTTCCTCCCGGGGTCTCAGAACTGGGAGTGCAGACGTTGGCGTTTCTCAGACTCCGGAGCTGCCCGGGACAGGAATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS TCA 90 bp | TCTCGGGGCAAGAGGCGAAGCTCAAAGACTGCCTGGGGTCGGACGTaGGCGCTGAAACACCGCTCAAACTGCACGAGCCGAGGCGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGKRRSSKTAWGRT*ALKHRSNCTSRGDA Trigger: GGCGTCGCCTCGGCTCGTGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGCCTCTTGCCCCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS TCA 90 bp | GCAAGAGGCGAAGCTCAAAGACTGCCTGGGGTCGGACGTGAGCGCTaGAACACCGCTCAAACTGCACGAGCCGAGGCGACGCCGGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ARGEAQRLPGVGRER*NTAQTARAEATPGL Trigger: TAACCCCGGCGTCGCCTCGGCTCGTGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGCCTCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS TCA 90 bp | ACGGAGAAGAAACGCTCTTCAGCACCAAACAGCCCGAGGCAGACATaGGGAGGAGGAGGAGGAAGGGAAGAGGGAGAAGGTCAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TEKKRSSAPNSPRQT*GGGGGREEGEGQGQ Trigger: CTGGCCCTGACCTTCTCCCTCTTCCCTTCCTCCTCCTCCTCCTCATGTCTGCCTCGGGCTGTTTGGTGCTGAAGAGCGTTTCTTCTCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 90 bp | TCCGATCATTACACATTCTCGGGGCAAGAGGCGAAGCTCAAAGACTaGCTGGGGTCGGACGTGAGCGCTGAAACACCGCTCAAACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SDHYTFSGQEAKLKD*LGSDVSAETPLKLH Trigger: GTGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGCCTCTTGCCCCGAGAATGTGTAATGATCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS GCA 90 bp | CCCGGGCCTGGGTTTTCACGCCTGCTTTCCCAGAAACCAAACTCCTaGAAGCAGGGGCAGAACCTCATTCCACCTGCATTCTCCGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGPGFSRLLSQKPNS*KQGQNLIPPAFSDH Trigger: ATGATCGGAGAATGCAGGTGGAATGAGGTTCTGCCCCTGCTTGCAGGAGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCCAGGCCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 90 bp | CGCTACGGGCTACTCGGTTCTGGTGACCAGACAATTTCGTCAGGATaGGGTGCACGAGACGGAGAAGAAACGCTCTTCAGCACCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RYGLLGSGDQTISSG*GARDGEETLFSTKQ Trigger: CTGTTTGGTGCTGAAGAGCGTTTCTTCTCCGTCTCGTGCACCGCATCCTGACGAAATTGTCTGGTCACCAGAACCGAGTAGCCCGTAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 90 bp | CCCACTTGCGTTTCTCAAATCAACCCGGGCCTGGGTTTTCACGCCTaGTTTCCCAGAAACCAAACTCCTGCAAGCAGGGGCAGAACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTCVSQINPGLGFHA*FPRNQTPASRGRTS Trigger: TGAGGTTCTGCCCCTGCTTGCAGGAGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS CCA 90 bp | AGGTCCTTCCAGACCCCACTTGCGTTTCTCAAATCAACCCGGGCCTaGGTTTTCACGCCTGCTTTCCCAGAAACCAAACTCCTGCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSFQTPLAFLKSTRA*VFTPAFPETKLLQA Trigger: TGCTTGCAGGAGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 90 bp | TCACTGTCTCCTACGAGCCATTATCCCAATCAGAATACCCTTCCCTaGAAATCCCACCTGTTCGTTTCAAAGCGCAGCCCATATCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SLSPTSHYPNQNTLP*KSHLFVSKRSPYLL Trigger: TAGCAGATATGGGCTGCGCTTTGAAACGAACAGGTGGGATTTGCAGGGAAGGGTATTCTGATTGGGATAATGGCTCGTAGGAGACAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496762.1 |
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| CDS-3UTR CAA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGGTTGCAACTCTCTGGTaGCTGACCATGAGAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NNQRRQHGLESFSCRLGKVATLW*LTMRML Trigger: TAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | AATAACCAAAGGAGACAGCACGGGCTCGAGTCTTTCAGCTGCCGCTTAGGAAAGAGTCACATGCAGTATTaGGGAAAGCAAGGAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NNQRRQHGLESFSCRLGKSHMQY*GKQGTE Trigger: TTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACT...CTTTCCTAAGCGGCAGCTGAAAGACTCGAGCCCGTGCTGTCTCCTTTGGTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTACTTTGTTTCGTCCTTaGGCTCTTTGCCTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCNSLVADHENVRKSHPFTLFRP*ALCLSE Trigger: CTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGT...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACATCCTTGCAAACCCACTaGCTTCATGTCTGTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLRKVTCSIWESKEQNTSLQTH*LHVCLY Trigger: GTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGA...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAGGCAGTACAGTTTACTaGGCCAACGTGGATAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPLRKVTCSIWESKEQNTGSTVY*ANVDNL Trigger: AAGATTATCCACGTTGGCCAAGTAAACTGTACTGCC...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | GGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTGGCAGTACAGTTTACTaGGCCAACGTGGATAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCNSLVADHENVRKSHPFGSTVY*ANVDNL Trigger: AAGATTATCCACGTTGGCCAAGTAAACTGTACTGCC...AAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | CTGCCGCTTAGGAAAGTCACATGCAGTATTTGGGAAAGCAAGGAACAGAACACAAGTCACATGCAGTATTaGGGAAAGCAAGGAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPLRKVTCSIWESKEQNTSHMQY*GKQGTE Trigger: TTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACT...TGTGTTCTGTTCCTTGCTTTCCCAAATACTGCATGTGACTTTCCTAAGCGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | CAGTATTTGGGAAAGCAAGGAACAGAACACAGGCATGAGTATTTTCTGGAAATACCTTCCAGACCCCACTaGCGTTTCTCAAATCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: QYLGKQGTEHRHEYFLEIPSRPH*RFSNQP Trigger: GGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAGG...TATTTCCAGAAAATACTCATGCCTGTGTTCTGTTCCTTGCTTTCCCAAATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATAACTTTGTTTCGTCCTTaGGCTCTTTGCCTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHNSRILLAVQFTWPTWITLFRP*ALCLSE Trigger: CTCACTCAGGCAAAGAGCCAAAGGACGAAACAAAGT...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATTCCTTGCAAACCCACTaGCTTCATGTCTGTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNSLQTH*LHVCLY Trigger: GTAAAGACAGACATGAAGCAAGTGGGTTTGCAAGGA...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | GAGTTGGTTGCAACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCAATTCCAGAATTCTATaGGCAGTACAGTTTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVATLWLLTMRMLGKATNSRIL*AVQFTW Trigger: CCAAGTAAACTGTACTGCCAATAGAATTCTGGAATT...GGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTTGCAACCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCAAACATGGTTTCCACTaGAGGAATGGTATGCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: NSLVADHENVRKSHPFRCKHGFH*RNGMPN Trigger: ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTT...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | TCCGGTACTTGTAAGCACAAACATGGTTTCCACTTGAGGAATGGTATGCCTAATGTTGCAACTCTCTGGTaGCTGACCATGAGAATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGTCKHKHGFHLRNGMPNVATLW*LTMRML Trigger: TAACATTCTCATGGTCAGCAACCAGAGAGTTGCAAC...ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTTGTGCTTACAAGTACCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCGCATCATTGAAGCACTaGAGAATTACCATGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLVADHENVRKSHPFRCASLKH*RITMKS Trigger: AGATTTCATGGTAATTCTCAAGTGCTTCAATGATGC...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | AACTCTCTGGTTGCTGACCATGAGAATGTTAGGAAAAGCCACCCATTTAGGTGCAATTCCAGAATTCTATaGGCAGTACAGTTTACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLVADHENVRKSHPFRCNSRIL*AVQFTW Trigger: CCAAGTAAACTGTACTGCCAATAGAATTCTGGAATT...GCACCTAAATGGGTGGCTTTTCCTAACATTCTCATGGTCAGCAACCAGAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | TTACAAAGCATAACAACAATAAATGCATGCATGAAAGGTGGGTTGGAACCATTACTGGATCTGGTCTCCTaGCAAACCCACTTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQSITTINACMKGGLEPLLDLVS*QTHLLH Trigger: ATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAG...TAATGGTTCCAACCCACCTTTCATGCATGCATTTATTGTTGTTATGCTTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
||
| CDS-3UTR CAA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATAAAACATGGTTTCCACTaGAGGAATGGTATGCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: SHNSRILLAVQFTWPTWIKHGFH*RNGMPN Trigger: ATTAGGCATACCATTCCTCAAGTGGAAACCATGTTT...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS-3UTR CAA 90 bp | TCTCACAATTCCAGAATTCTATTGGCAGTACAGTTTACTTGGCCAACGTGGATAGCATCATTGAAGCACTaGAGAATTACCATGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SHNSRILLAVQFTWPTWIASLKH*RITMKS Trigger: AGATTTCATGGTAATTCTCAAGTGCTTCAATGATGC...TATCCACGTTGGCCAAGTAAACTGTACTGCCAATAGAATTCTGGAATTGTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379888.9 ENST00000446108.5 |
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| CDS TCA 90 bp | AATACCAAGGAAATAAGTATAATTTGTTCATCATCAAAAACGTACTaGATGCCTGTTTTTATGACAGGCATTGTTAGGTGCCAGGAACAC | + |
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Preference number: 5 (lower is better) Translates to: NTKEISIICSSSKTY*MPVFMTGIVRCQEH Trigger: GTGTTCCTGGCACCTAACAATGCCTGTCATAAAAACAGGCATTCAGTACGTTTTTGATGATGAACAAATTATACTTATTTCCTTGGTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000496762.1 |
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| CDS GCA 72 bp | CCCGGGCAGCTCCGGAGTCTGAGAAACGCCAACGTCTaGACTCCCAGTTCTGAGACCCCGGGAGGAACCGGC | + |
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Preference number: 6 (lower is better) Translates to: PGQLRSLRNANV*TPSSETPGGTG Trigger: GCCGGTTCCTCCCGGGGTCTCAGAACTGGGAGTGCAGACGTTGGCGTTTCTCAGACTCCGGAGCTGCCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS TCA 72 bp | GAGTCTGAGAAACGCCAACGTCTGCACTCCCAGTTCTaGGACCCCGGGAGGAACCGGCTCCGAGCCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ESEKRQRLHSQF*DPGRNRLRAPE Trigger: CTCTGGGGCTCGGAGCCGGTTCCTCCCGGGGTCTCAGAACTGGGAGTGCAGACGTTGGCGTTTCTCAGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS TCA 72 bp | GAAGCTCAAAGACTGCCTGGGGTCGGACGTGAGCGCTaGAACACCGCTCAAACTGCACGAGCCGAGGCGACG | + |
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Preference number: 6 (lower is better) Translates to: EAQRLPGVGRER*NTAQTARAEAT Trigger: CGTCGCCTCGGCTCGTGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS TCA 72 bp | AAGAGGCGAAGCTCAAAGACTGCCTGGGGTCGGACGTaGGCGCTGAAACACCGCTCAAACTGCACGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: KRRSSKTAWGRT*ALKHRSNCTSR Trigger: TCGGCTCGTGCAGTTTGAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGCCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 72 bp | TACACATTCTCGGGGCAAGAGGCGAAGCTCAAAGACTaGCTGGGGTCGGACGTGAGCGCTGAAACACCGCTC | + |
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Preference number: 6 (lower is better) Translates to: YTFSGQEAKLKD*LGSDVSAETPL Trigger: GAGCGGTGTTTCAGCGCTCACGTCCGACCCCAGGCAGTCTTTGAGCTTCGCCTCTTGCCCCGAGAATGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS TCA 72 bp | AAACGCTCTTCAGCACCAAACAGCCCGAGGCAGACATaGGGAGGAGGAGGAGGAAGGGAAGAGGGAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: KRSSAPNSPRQT*GGGGGREEGEG Trigger: ACCTTCTCCCTCTTCCCTTCCTCCTCCTCCTCCTCATGTCTGCCTCGGGCTGTTTGGTGCTGAAGAGCGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 72 bp | CCTCCTCTCTCAAGAGAGGTCCTTCCAGACCCCACTTaGGTTTCTCAAATCAACCCGGGCCTGGGTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PPLSREVLPDPT*VSQINPGLGFH Trigger: GTGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAGGACCTCTCTTGAGAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS TCA 72 bp | TTGTTAGGTGCCAGGAACACAGGGCTAGGCAGTCTCTaGCCTCATAAAGGCCCTGTGCCAGCTGATGACGTA | + |
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Preference number: 6 (lower is better) Translates to: LLGARNTGLGSL*PHKGPVPADDV Trigger: TACGTCATCAGCTGGCACAGGGCCTTTATGAGGTCAGAGACTGCCTAGCCCTGTGTTCCTGGCACCTAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496762.1 |
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| CDS GCA 72 bp | CTACTCGGTTCTGGTGACCAGACAATTTCGTCAGGATaGGGTGCACGAGACGGAGAAGAAACGCTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLGSGDQTISSG*GARDGEETLFS Trigger: GCTGAAGAGCGTTTCTTCTCCGTCTCGTGCACCGCATCCTGACGAAATTGTCTGGTCACCAGAACCGAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 72 bp | GGGTTTTCACGCCTGCTTTCCCAGAAACCAAACTCCTaGAAGCAGGGGCAGAACCTCATTCCACCTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: GFSRLLSQKPNS*KQGQNLIPPAF Trigger: GAATGCAGGTGGAATGAGGTTCTGCCCCTGCTTGCAGGAGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS CCA 72 bp | CAGACCCCACTTGCGTTTCTCAAATCAACCCGGGCCTaGGTTTTCACGCCTGCTTTCCCAGAAACCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: QTPLAFLKSTRA*VFTPAFPETKL Trigger: GAGTTTGGTTTCTGGGAAAGCAGGCGTGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS CAA 72 bp | ACCTCCTCTCTCAAGAGAGGTCCTTCCAGACCCCACTaGCGTTTCTCAAATCAACCCGGGCCTGGGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSSLKRGPSRPH*RFSNQPGPGFS Trigger: TGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAGGACCTCTCTTGAGAGAGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS CAA 90 bp | ATAAGCATGACCTCCTCTCTCAAGAGAGGTCCTTCCAGACCCCACTaGCGTTTCTCAAATCAACCCGGGCCTGGGTTTTCACGCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ISMTSSLKRGPSRPH*RFSNQPGPGFSRLL Trigger: AAGCAGGCGTGAAAACCCAGGCCCGGGTTGATTTGAGAAACGCAAGTGGGGTCTGGAAGGACCTCTCTTGAGAGAGGAGGTCATGCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446108.5 |
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| CDS GCA 72 bp | CCTACGAGCCATTATCCCAATCAGAATACCCTTCCCTaGAAATCCCACCTGTTCGTTTCAAAGCGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PTSHYPNQNTLP*KSHLFVSKRSP Trigger: TGGGCTGCGCTTTGAAACGAACAGGTGGGATTTGCAGGGAAGGGTATTCTGATTGGGATAATGGCTCGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496762.1 |
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| CDS CAA 72 bp | CTTCTGCTAATCCCCAACAGGCCCATCCATTCCATTTaGGTAGTCCTGATCTTCACTGTCTCCTACGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LLLIPNRPIHSI*VVLIFTVSYEP Trigger: TGGCTCGTAGGAGACAGTGAAGATCAGGACTACCAAAATGGAATGGATGGGCCTGTTGGGGATTAGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496762.1 |
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