RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM12 (Homo sapiens)

Ensembl gene IDs: ENSG00000244462

Ensembl transcript IDs: ENST00000359646.1, ENST00000374104.7, ENST00000374114.8, ENST00000424458.5, ENST00000431148.1, ENST00000435161.1

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTaGTCCTCCTGCCTTAGTGTCCTGAATACCAAAGAAAAGAGTATG +
Preference number: 1 (lower is better)
Translates to: GKCFHDKDTYQPELM*SSCLSVLNTKEKSM
Trigger: CATACTCTTTTCTTTGGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR GCA 90 bp TTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTCCTaGCTTAGTGTCCTGAATACCAAAGAAAAGAGTATGAAAGGGTCA +
Preference number: 1 (lower is better)
Translates to: FHDKDTYQPELMWSS*LSVLNTKEKSMKGS
Trigger: TGACCCTTTCATACTCTTTTCTTTGGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR TCA 90 bp TTGAACAGTATTCAAGACTTCATCTTTATAAACAAAAACCTCTGCTaGGTGATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATAT +
Preference number: 1 (lower is better)
Translates to: LNSIQDFIFINKNLC*VMPRQYLLAMLWPY
Trigger: ATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATCACTCAGCAGAGGTTTTTGTTTATAAAGATGAAGTCTTGAATACTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCTCAATTTTCTCCTCTaGCGGCTGCACTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTLNFLL*RLHLYS
Trigger: AGAGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCA +
Preference number: 2 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTVYPGE*VFCKQS
Trigger: TGACTGTTTACAGAAGACTCACTCACCAGGATAAAC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATCAAGAGCACCCTCAATaGGTTCTACTGACATTTCTA +
Preference number: 2 (lower is better)
Translates to: DAKAVFAGNVVAILATSHQEHPQ*VLLTFL
Trigger: TAGAAATGTCAGTAGAACTCATTGAGGGTGCTCTTG...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTTTCTCCTCTGGCGGCTaGACTTGTACTCTGTATGAA +
Preference number: 2 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPFSSGG*TCTLYE
Trigger: TTCATACAGAGTACAAGTGCAGCCGCCAGAGGAGAA...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTTCTCCTCTGGCGGCTaGACTTGTACTCTGTATGAA +
Preference number: 2 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYFSSGG*TCTLYE
Trigger: TTCATACAGAGTACAAGTGCAGCCGCCAGAGGAGAA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCACACTTTCTTATGAATaGGCCCCTCTTTGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTTLSYE*APLCLK
Trigger: CTTTAAACAAAGAGGGGCCCATTCATAAGAAAGTGT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATAGGCAAGTGTTTTCATaGCAAGGACACTTACCAACC +
Preference number: 2 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYRQVFS*QGHLPT
Trigger: GGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGGCAAGTGTTTTCATaGCAAGGACACTTACCAACC +
Preference number: 2 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRQVFS*QGHLPT
Trigger: GGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
3UTR-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGGAAAACAATCTGGATaGATTAATCACAGCAATATG +
Preference number: 2 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTGKQSG*INHSNM
Trigger: CATATTGCTGTGATTAATGCATCCAGATTGTTTTCC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATAAACTGAAACTCCAATaGCCAGAACAAGATAAACAG +
Preference number: 2 (lower is better)
Translates to: DAKAVFAGNVVAILATSHKLKLQ*PEQDKQ
Trigger: CTGTTTATCTTGTTCTGGGCATTGGAGTTTCAGTTT...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCAATGCTCTATGTTATaGAAACCAAGCTATATGCAA +
Preference number: 2 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTQCSML*KPSYMQ
Trigger: TTGCATATAGCTTGGTTTCCATAACATAGAGCATTG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACTCAATTTTCTCCTCTaGCGGCTGCACTTGTACTCT +
Preference number: 2 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVLNFLL*RLHLYS
Trigger: AGAGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 90 bp CAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATTTaGTTGTGTTTGGTTTCTAAAGTCTGGACTACTATAGAACTGCCA +
Preference number: 2 (lower is better)
Translates to: QYLLAMLWPYWQQAI*LCLVSKVWTTIELP
Trigger: TGGCAGTTCTATAGTAGTCCAGACTTTAGAAACCAAACACAACAAAATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACAAAGCAGCAACTTCTaGAGCAGGACTGTCTATACA +
Preference number: 2 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVQSSNF*SRTVYT
Trigger: TGTATAGACAGTCCTGCTTCAGAAGTTGCTGCTTTG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTCACTTGTACTCTGTATaGAGACTTTTAGTAAACAGG +
Preference number: 2 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPHLYSV*RLLVNR
Trigger: CCTGTTTACTAAAAGTCTTCATACAGAGTACAAGTG...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTACACTTTCTTATGAATaGGCCCCTCTTTGTTTAAAG +
Preference number: 2 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTTLSYE*APLCLK
Trigger: CTTTAAACAAAGAGGGGCCCATTCATAAGAAAGTGT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 90 bp CTGGCAATGTTGTGGCCATATTGGCAACAAGCCATTTTGTTGTGTTaGGTTTCTAAAGTCTGGACTACTATAGAACTGCCAGTAAAACAA +
Preference number: 2 (lower is better)
Translates to: LAMLWPYWQQAILLC*VSKVWTTIELPVKQ
Trigger: TTGTTTTACTGGCAGTTCTATAGTAGTCCAGACTTTAGAAACCAAACACAACAAAATGGCTTGTTGCCAATATGGCCACAACATTGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR CAA 90 bp TATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATTTTGTaGTGTTTGGTTTCTAAAGTCTGGACTACTATAGAACTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: YLLAMLWPYWQQAIL*CLVSKVWTTIELPV
Trigger: TACTGGCAGTTCTATAGTAGTCCAGACTTTAGAAACCAAACACAACAAAATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR TCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGATATAACACTTTCTTATaGATGGGCCCCTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGYNTFL*MGPSLF
Trigger: AAACAAAGAGGGGCCCATTCATAAGAAAGTGTTATA...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATACATTTTCAGAGCATTaGCTAGGGAAAGTAACCATA +
Preference number: 2 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYTFSEH*LGKVTI
Trigger: TATGGTTACTTTCCCTAGTCAATGCTCTGAAAATGT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACCAACAAAACAGTTCTaGTCATTTACAAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTPTKQF*SFTNES
Trigger: TGACTCATTTGTAAATGAGCAGAACTGTTTTGTTGG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAAGAGCACCCTCAATaGGTTCTACTGACATTTCTA +
Preference number: 2 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQEHPQ*VLLTFL
Trigger: TAGAAATGTCAGTAGAACTCATTGAGGGTGCTCTTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACAAAGCAGCAACTTCTaGAGCAGGACTGTCTATACA +
Preference number: 2 (lower is better)
Translates to: LTRINLRTSIRIFYSILLQSSNF*SRTVYT
Trigger: TGTATAGACAGTCCTGCTTCAGAAGTTGCTGCTTTG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCACTTGTACTCTGTATaGAGACTTTTAGTAAACAGG +
Preference number: 2 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVHLYSV*RLLVNR
Trigger: CCTGTTTACTAAAAGTCTTCATACAGAGTACAAGTG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCA +
Preference number: 2 (lower is better)
Translates to: LTRINLRTSIRIFYSILLVYPGE*VFCKQS
Trigger: TGACTGTTTACAGAAGACTCACTCACCAGGATAAAC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACAAGAGCACCCTCAATaGGTTCTACTGACATTTCTA +
Preference number: 2 (lower is better)
Translates to: LTRINLRTSIRIFYSILLQEHPQ*VLLTFL
Trigger: TAGAAATGTCAGTAGAACTCATTGAGGGTGCTCTTG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTATATAACACTTTCTTATaGATGGGCCCCTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVYNTFL*MGPSLF
Trigger: AAACAAAGAGGGGCCCATTCATAAGAAAGTGTTATA...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACCAAAGAAAAGAGTATaGAAGGGTCAAGAATCTCAA +
Preference number: 2 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVPKKRV*KGQESQ
Trigger: TTGAGATTCTTGACCCTTTCATACTCTTTTCTTTGG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACAATGCTCTATGTTATaGAAACCAAGCTATATGCAA +
Preference number: 2 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKQCSML*KPSYMQ
Trigger: TTGCATATAGCTTGGTTTCCATAACATAGAGCATTG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 90 bp ACAGTCAACCAATGCTCTATGTTATGGAAACCAAGCTATATGCAATaGAAACAATCCACAGGTTCTAACCTGGAAATACTAGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: TVNQCSMLWKPSYMQ*KQSTGSNLEILGKQ
Trigger: TTGTTTTCCTAGTATTTCCAGGTTAGAACCTGTGGATTGTTTCAATTGCATATAGCTTGGTTTCCATAACATAGAGCATTGGTTGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATAACACTTTCTTATaGATGGGCCCCTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFYNTFL*MGPSLF
Trigger: AAACAAAGAGGGGCCCATTCATAAGAAAGTGTTATA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACCAACAAAACAGTTCTaGTCATTTACAAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVPTKQF*SFTNES
Trigger: TGACTCATTTGTAAATGAGCAGAACTGTTTTGTTGG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGGAAAACAATCTGGATaGATTAATCACAGCAATATG +
Preference number: 2 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFGKQSG*INHSNM
Trigger: CATATTGCTGTGATTAATGCATCCAGATTGTTTTCC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCCAACAAAACAGTTCTaGTCATTTACAAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFPTKQF*SFTNES
Trigger: TGACTCATTTGTAAATGAGCAGAACTGTTTTGTTGG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAATGCTCTATGTTATaGAAACCAAGCTATATGCAA +
Preference number: 2 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQCSML*KPSYMQ
Trigger: TTGCATATAGCTTGGTTTCCATAACATAGAGCATTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CAA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATGATGAGATTTTACACTaGGCCCATACCTGTACACAA +
Preference number: 3 (lower is better)
Translates to: DAKAVFAGNVVAILATSHDEILH*AHTCTQ
Trigger: TTGTGTACAGGTATGGGCCAAGTGTAAAATCTCATC...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCGGGACAGGAGGAAATaGATACTACAATTAGTCCAT +
Preference number: 3 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTRDRRK*ILQLVH
Trigger: ATGGACTAATTGTAGTATCAATTTCCTCCTGTCCCG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CCA 72 bp ACCTGTACACAACCACAGACTCCAGTAAAAGGGAGCTaGAATTTAAGGCTTTCACGCATCCTTGTTTTTATG +
Preference number: 3 (lower is better)
Translates to: TCTQPQTPVKGS*NLRLSRILVFM
Trigger: CATAAAAACAAGGATGCGTGAAAGCCTTAAATTCCAGCTCCCTTTTACTGGAGTCTGTGGTTGTGTACAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 3 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CCA 72 bp CCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTaGCAACAAGCCATTTTGTTGTGTTTGGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: PRQYLLAMLWPY*QQAILLCLVSK
Trigger: TTTAGAAACCAAACACAACAAAATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCAACATAGTCACCTCTaGAGTCTAAACAATCCTTCT +
Preference number: 3 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVQHSHL*SLNNPS
Trigger: AGAAGGATTGTTTAGACTCAAGAGGTGACTATGTTG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCGGGACAGGAGGAAATaGATACTACAATTAGTCCAT +
Preference number: 3 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFRDRRK*ILQLVH
Trigger: ATGGACTAATTGTAGTATCAATTTCCTCCTGTCCCG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR TCA 72 bp TTTACTGTAACATACAGCAATGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCAACCAATGCTCTATGT +
Preference number: 3 (lower is better)
Translates to: FTVTYSNVYPGE*VFCKQSTNALC
Trigger: ACATAGAGCATTGGTTGACTGTTTACAGAAGACTCACTCACCAGGATAAACATTGCTGTATGTTACAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CAA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 3 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LTRINLRTSIRIFYSILLTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR TCA 72 bp CTTAAATTACACAACCGCTGTATTTCAGTGTTCCACTaGCTCACAACACCAAAAAGGCACTGTATATATATA +
Preference number: 3 (lower is better)
Translates to: LKLHNRCISVFH*LTTPKRHCIYI
Trigger: TATATATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGTTGTGTAATTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAACCAGGCAGTCCTGTaGTGGGCAGGCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTNQAVL*WAGLHR
Trigger: CCGGTGCAGGCCTGCCCAGCACAGGACTGCCTGGTT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCACCACCAATATGGATTaGGCCAGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTTTNMD*ARAGAG
Trigger: CCCGGCCCCGGCCCTGGCCCAATCCATATTGGTGGT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGCCAGGCCCAAAAGCTaGTGGCCCACCCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTARPKS*WPTQMP
Trigger: GGGCATTTGGGTGGGCCACCAGCTTTTGGGCCTGGC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCAATCCGGGGAAAGCTaGGCGGCACCAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTQSGES*AAPEPR
Trigger: TCTGGGTTCTGGTGCCGCGCAGCTTTCCCCGGATTG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374104.7
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCGGGCAGTCCCGCATTaGGCATTCCTGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTRAVPH*AFLELQ
Trigger: CTGCAGTTCCAGGAATGCCCAATGCGGGACTGCCCG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGCGGCATGCCCGACATaGGTGGCAGTGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPAACPT*VAVGSW
Trigger: CCATGACCCCACTGCCACCCATGTCGGGCATGCCGC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGCGGCATGCCCGACATaGGTGGCAGTGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTAACPT*VAVGSW
Trigger: CCATGACCCCACTGCCACCCATGTCGGGCATGCCGC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTCAGGCAGTCCTGTGCTaGGCAGGCCTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPQAVLC*AGLHRE
Trigger: TTCCCGGTGCAGGCCTGCCCAGCACAGGACTGCCTG...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTACCACCAATATGGATTaGGCCAGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPTTNMD*ARAGAG
Trigger: CCCGGCCCCGGCCCTGGCCCAATCCATATTGGTGGT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTGTGCTGGGCAGGCCTaGACCGGGAAGTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTCAGQA*TGKSCT
Trigger: AGTGCAGGACTTCCCGGTGCAGGCCTGCCCAGCACA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACATGCCCGACATGGGTaGCAGTGGGGTCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTHARHG*QWGHGW
Trigger: CCACCCATGACCCCACTGCCACCCATGTCGGGCATG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACGGGAAGTCCTGCACTaGGCAGTCCCACACCGGGCA +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSREVLH*AVPHRA
Trigger: TGCCCGGTGTGGGACTGCCCAGTGCAGGACTTCCCG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACAGGCAGTCCTGTGCTaGGCAGGCCTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGQAVLC*AGLHRE
Trigger: TTCCCGGTGCAGGCCTGCCCAGCACAGGACTGCCTG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTACAGCCATGCTGCGCTaGAACCACACACACCGGGGA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPTAMLR*NHTHRG
Trigger: TCCCCGGTGTGTGTGGTTTCAGCGCAGCATGGCTGT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359646.1
CDS-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCTGTGCTTGGAACAGTTaGGCTAAACGTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTCAWNS*AKRWAP
Trigger: GGGAGCCCAACGTTTAGCTCAACTGTTCCAAGCACA...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGGCTTCACACTGCTCTaGGAGTTCATCTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTGFTLL*EFIWIG
Trigger: CCCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGATTCAAGGGCGGCATaGCCGACATGGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPDSRAA*PTWVAV
Trigger: CACTGCCACCCATGTCGGGCATGCCGCCCTTGAATC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGATTCAAGGGCGGCATaGCCGACATGGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTDSRAA*PTWVAV
Trigger: CACTGCCACCCATGTCGGGCATGCCGCCCTTGAATC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTAACCAGGCAGTCCTGTaGTGGGCAGGCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVNQAVL*WAGLHR
Trigger: CCGGTGCAGGCCTGCCCAGCACAGGACTGCCTGGTT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGGTGGCCCACCCAAATaGCCAGGGGCACTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPGGPPK*PGALPR
Trigger: TCTTGGAAGTGCCCCTGGGCATTTGGGTGGGCCACC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATGGTCCCCGCCACAATTaGGAGACCTTGCAAACGGAT +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHGPRHN*ETLQTD
Trigger: ATCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACC...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTGGCACAGAAGGAACTaGGGGAATCGGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTWHRRN*GNRGHR
Trigger: CCTGTGCCCCCGATTCCCCCAGTTCCTTCTGTGCCA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTCAGTGGGGTCATGGGTaGCACAGAAGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPQWGHG*HRRNWG
Trigger: CCCCCAGTTCCTTCTGTGCCACCCATGACCCCACTG...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACGACATGGGTGGCAGTaGGGTCATGGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTRHGWQ*GHGWHR
Trigger: TCTGTGCCACCCATGACCCCACTGCCACCCATGTCG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGCCAGGCCCAAAAGCTaGTGGCCCACCCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGARPKS*WPTQMP
Trigger: GGGCATTTGGGTGGGCCACCAGCTTTTGGGCCTGGC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTTGTGCTGGGCAGGCCTaGACCGGGAAGTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVCAGQA*TGKSCT
Trigger: AGTGCAGGACTTCCCGGTGCAGGCCTGCCCAGCACA...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGGTGGCCCACCCAAATaGCCAGGGGCACTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYGGPPK*PGALPR
Trigger: TCTTGGAAGTGCCCCTGGGCATTTGGGTGGGCCACC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTTAGACGGGGAAAGCTaGGCGGCACCAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTLDGES*AAPEPR
Trigger: TCTGGGTTCTGGTGCCGCGCAGCTTTCCCCGTCTAA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTGGCATCGCTGGAATTaGAGGAATTGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTWHRWN*RNWWRR
Trigger: CCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGGAGGAACTGGAATTaGGGGAATGGATGGCATTGG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTRRNWN*GNGWHW
Trigger: CCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TGCTTACTTCCATACAGTCCTAGATTTTCATCCAGTGGGTTAAGACTGGCCTTACGACATGGGTGGCAGTaGGGTCATGGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: CLLPYSPRFSSSGLRLALRHGWQ*GHGWHR
Trigger: TCTGTGCCACCCATGACCCCACTGCCACCCATGTCG...TAAGGCCAGTCTTAACCCACTGGATGAAAATCTAGGACTGTATGGAAGTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCATGCCCGACATGGGTaGCAGTGGGGTCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVHARHG*QWGHGW
Trigger: CCACCCATGACCCCACTGCCACCCATGTCGGGCATG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAGCGGCATGCCCGACATaGGTGGCAGTGGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVAACPT*VAVGSW
Trigger: CCATGACCCCACTGCCACCCATGTCGGGCATGCCGC...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACGGGCAGTCCCGCATTaGGCATTCCTGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRAVPH*AFLELQ
Trigger: CTGCAGTTCCAGGAATGCCCAATGCGGGACTGCCCG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATAGGCCCAAAAGCTGGTaGCCCACCCAAATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYRPKSW*PTQMPR
Trigger: CCTGGGCATTTGGGTGGGCCACCAGCTTTTGGGCCT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGGCCCAAAAGCTGGTaGCCCACCCAAATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRPKSW*PTQMPR
Trigger: CCTGGGCATTTGGGTGGGCCACCAGCTTTTGGGCCT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGCCAGGCCCAAAAGCTaGTGGCCCACCCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVARPKS*WPTQMP
Trigger: GGGCATTTGGGTGGGCCACCAGCTTTTGGGCCTGGC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGCTAGGTGGTGGTCCTaGTCTACTGGCATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTARWWS*STGICW
Trigger: CCAGCAAATGCCAGTAGATCAGGACCACCACCTAGC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGACCTTGATCTTTTCTaGCCACTGGGCGATTTTGAC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTDLDLF*PLGDFD
Trigger: GTCAAAATCGCCCAGTGGGCAGAAAAGATCAAGGTC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGGGCATTCCTGGAACTaGAGGATTACCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPGHSWN*RITWHR
Trigger: CCTGTGCCAGGTAATCCTGCAGTTCCAGGAATGCCC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGGGCATTCCTGGAACTaGAGGATTACCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTGHSWN*RITWHR
Trigger: CCTGTGCCAGGTAATCCTGCAGTTCCAGGAATGCCC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACATGCACTAGGTATTCCTaGACTGGGCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTCTRYS*TGHSRT
Trigger: GGTGCGGGAATGCCCAGTGCAGGAATACCTAGTGCA...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTSGECP*SPPQLG
Trigger: TCCCAATTGTGGCGGGGACCATGGACATTCGCCACT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCATGGCATCGCTGGAATTaGAGGAATTGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSWHRWN*RNWWRR
Trigger: CCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCA...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATCAGAGATGGCATCGCTaGAATTGGAGGAATTGGTGG +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHQRWHR*NWRNWW
Trigger: CCACCAATTCCTCCAATTCCAGCGATGCCATCTCTG...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGGGAATGGATGGCATTaGTGGCAGAGATGGCATCGC +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPGNGWH*WQRWHR
Trigger: GCGATGCCATCTCTGCCACCAATGCCATCCATTCCC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGGGAATGGATGGCATTaGTGGCAGAGATGGCATCGC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTGNGWH*WQRWHR
Trigger: GCGATGCCATCTCTGCCACCAATGCCATCCATTCCC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGGCAATGTAGGTACTaGAGGAGGAACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTRQCRY*RRNWNW
Trigger: CCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAATGGCACAGAAGGAACTaGGGGAATCGGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKWHRRN*GNRGHR
Trigger: CCTGTGCCCCCGATTCCCCCAGTTCCTTCTGTGCCA...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACAGTGGGGTCATGGGTaGCACAGAAGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKQWGHG*HRRNWG
Trigger: CCCCCAGTTCCTTCTGTGCCACCCATGACCCCACTG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACGGGCAGTCCCGCATTaGGCATTCCTGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKRAVPH*AFLELQ
Trigger: CTGCAGTTCCAGGAATGCCCAATGCGGGACTGCCCG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAGGCAGTCCTGTGCTaGGCAGGCCTGCACCGGGAA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQAVLC*AGLHRE
Trigger: TTCCCGGTGCAGGCCTGCCCAGCACAGGACTGCCTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTAGGCCCAAAAGCTGGTaGCCCACCCAAATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVRPKSW*PTQMPR
Trigger: CCTGGGCATTTGGGTGGGCCACCAGCTTTTGGGCCT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACATGTGCTTGGAACAGTTaGGCTAAACGTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTCAWNS*AKRWAP
Trigger: GGGAGCCCAACGTTTAGCTCAACTGTTCCAAGCACA...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTACAGATCATCAGGGTTaGTGGGGAGTGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPTDHQG*WGVASH
Trigger: GTGTGAAGCCACTCCCCATCAACCCTGATGATCTGT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTACAGATCATCAGGGTTaGTGGGGAGTGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTTDHQG*WGVASH
Trigger: GTGTGAAGCCACTCCCCATCAACCCTGATGATCTGT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCCCACTGGGCGATTTTaGCCTGGGAAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVPTGRF*PGKCLR
Trigger: CCTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACCCACTGGGCGATTTTaGCCTGGGAAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKPTGRF*PGKCLR
Trigger: CCTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGGCAAGTGTTTTCATaGCAAGGACACTTACCAACC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTRQVFS*QGHLPT
Trigger: GGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGCCTGTCCTAGACCTTaGCCATTGTTATCAACAAGA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTACPRP*PLLSTR
Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGACAGGC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTGCACCGGGAAGTCCTaGACTGGGCAGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFCTGKS*TGQSHT
Trigger: GGTGTGGGACTGCCCAGTGCAGGACTTCCCGGTGCA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAAACCAGGCAGTCCTGTaGTGGGCAGGCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLNQAVL*WAGLHR
Trigger: CCGGTGCAGGCCTGCCCAGCACAGGACTGCCTGGTT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTGCACTAGGTATTCCTaGACTGGGCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYCTRYS*TGHSRT
Trigger: GGTGCGGGAATGCCCAGTGCAGGAATACCTAGTGCA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGGTCCCCGCCACAATTaGGAGACCTTGCAAACGGAT +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGGPRHN*ETLQTD
Trigger: ATCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGGAAGCCCCCATATTTaGAGGAGCTGTTCCTACGCT +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTGSPHI*RSCSYA
Trigger: AGCGTAGGAACAGCTCCTCCAAATATGGGGGCTTCC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACGGGACTGTGTTCATTaGAGAGGCTGTGCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTRDCVH*RGCAWN
Trigger: GTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAATGGATGGCATTGGTaGCAGAGATGGCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPNGWHW*QRWHRW
Trigger: CCAGCGATGCCATCTCTGCCACCAATGCCATCCATT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATTGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCAC +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHCLKVI*PPAATH
Trigger: GTGGGTAGCTGCTGGAGGCCATATCACTTTTAAGCA...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTGGGCGATTTTGACCTaGGAAGTGTCTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYWAILT*EVSEEG
Trigger: CCCCTCCTCAGACACTTCCCAGGTCAAAATCGCCCA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACGGGAAGTCCTGCACTaGGCAGTCCCACACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLREVLH*AVPHRA
Trigger: TGCCCGGTGTGGGACTGCCCAGTGCAGGACTTCCCG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCGGGAAGTCCTGCACTaGGCAGTCCCACACCGGGCA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFREVLH*AVPHRA
Trigger: TGCCCGGTGTGGGACTGCCCAGTGCAGGACTTCCCG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGACCACCAATATGGATTaGGCCAGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKTTNMD*ARAGAG
Trigger: CCCGGCCCCGGCCCTGGCCCAATCCATATTGGTGGT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTACTCAAAGGCCACCATaGCTTCACCTGTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTTQRPP*LHLWAY
Trigger: GTATGCCCACAGGTGAAGCCATGGTGGCCTTTGAGT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCAGTGGCAAAAACGATaGAAGCCTCACCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTQWQKR*KPHPVH
Trigger: GTGAACTGGGTGAGGCTTTCATCGTTTTTGCCACTG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATACAGATCATCAGGGTTaGTGGGGAGTGGCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYTDHQG*WGVASH
Trigger: GTGTGAAGCCACTCCCCATCAACCCTGATGATCTGT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCTCTAGGGTAACTACATaGACAAAAGCTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTSRVTT*TKASLP
Trigger: TGGGAGAGAAGCTTTTGTTCATGTAGTTACCCTAGA...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATATTATTGGCTTCCTTTaGTCCTACAGTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHIIGFL*SYSQEG
Trigger: GCCTTCCTGACTGTAGGATCAAAGGAAGCCAATAAT...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACACACCGGGGAAAGCTaGGCGGCACCAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLHTGES*AAPEPR
Trigger: TCTGGGTTCTGGTGCCGCGCAGCTTTCCCCGGTGTG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359646.1
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTACAATTGGGAGACCTTaGAAACGGATGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPTIGRP*KRMTTA
Trigger: GGCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCATCACCCCCTACAATATaGACGCCCCCATCAGGAATG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSSPPTI*TPPSGM
Trigger: CATTCCTGATGGGGGCGTGCATATTGTAGGGGGTGA...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCATCATACCAAGCCTTaGATCTTCATCAGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTHHTKP*IFISGK
Trigger: TTTGCCACTGATGAAGATGCAAGGCTTGGTATGATG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGTTCAAATTCATAGGTaGTCCAGAGCCATTCATTCC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTVQIHR*SRAIHS
Trigger: GGAATGAATGGCTCTGGAGCACCTATGAATTTGAAC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGGAGTGGCTTCACACTaGTCTGAGAGTTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTGVASH*SESSSG
Trigger: TCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGGAGTGGCTTCACACTaGTCTGAGAGTTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPGVASH*SESSSG
Trigger: TCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTGCACCGGGAAGTCCTaGACTGGGCAGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFCTGKS*TGQSHT
Trigger: GGTGTGGGACTGCCCAGTGCAGGACTTCCCGGTGCA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTGCACCGGGAAGTCCTaGACTGGGCAGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKCTGKS*TGQSHT
Trigger: GGTGTGGGACTGCCCAGTGCAGGACTTCCCGGTGCA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTGTGCTGGGCAGGCCTaGACCGGGAAGTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFCAGQA*TGKSCT
Trigger: AGTGCAGGACTTCCCGGTGCAGGCCTGCCCAGCACA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAATCCAGAGAAGAAGTaGCGAATGTCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPNPEKK*RMSMVP
Trigger: GGGGACCATGGACATTCGCCACTTCTTCTCTGGATT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGGAAGCCCCCATATTTaGAGGAGCTGTTCCTACGCT +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYGSPHI*RSCSYA
Trigger: AGCGTAGGAACAGCTCCTCCAAATATGGGGGCTTCC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAATTGGAGGAATTGGTaGCGGCGGGACTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTNWRNW*RRDCVH
Trigger: ATGAACACAGTCCCGCCGCCACCAATTCCTCCAATT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGATGGAATTGGAGGAATTaGTGGCGGCGGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGWNWRN*WRRDCV
Trigger: AACACAGTCCCGCCGCCACCAATTCCTCCAATTCCA...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TGCTTACTTCCATACAGTCCTAGATTTTCATCCAGTGGGTTAAGACTGGCCTTATGGAATTGGAGGAATTaGTGGCGGCGGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: CLLPYSPRFSSSGLRLALWNWRN*WRRDCV
Trigger: AACACAGTCCCGCCGCCACCAATTCCTCCAATTCCA...TAAGGCCAGTCTTAACCCACTGGATGAAAATCTAGGACTGTATGGAAGTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACATTGGTGGCAGAGATaGCATCGCTGGAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSHWWQR*HRWNWR
Trigger: CCTCCAATTCCAGCGATGCCATCTCTGCCACCAATG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATAATGGATGGCATTGGTaGCAGAGATGGCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYNGWHW*QRWHRW
Trigger: CCAGCGATGCCATCTCTGCCACCAATGCCATCCATT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAATTGGGGGAATGGATaGCATTGGTGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTNWGNG*HWWQRW
Trigger: CCATCTCTGCCACCAATGCCATCCATTCCCCCAATT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAATTGGGGGAATGGATaGCATTGGTGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPNWGNG*HWWQRW
Trigger: CCATCTCTGCCACCAATGCCATCCATTCCCCCAATT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAGGAGGAACTGGAATTaGGGGAATGGATGGCATTGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPRRNWN*GNGWHW
Trigger: CCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAGTGGGGTCATGGGTaGCACAGAAGGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQWGHG*HRRNWG
Trigger: CCCCCAGTTCCTTCTGTGCCACCCATGACCCCACTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATAGGGTTGATGGGGAGTaGCTTCACACTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYRVDGE*LHTALR
Trigger: TCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACGCATTGGGCATTCCTaGAACTGCAGGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGRIGHS*NCRITW
Trigger: CCAGGTAATCCTGCAGTTCCAGGAATGCCCAATGCG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACGCATTGGGCATTCCTaGAACTGCAGGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRIGHS*NCRITW
Trigger: CCAGGTAATCCTGCAGTTCCAGGAATGCCCAATGCG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATATGGAGGCCCATTATTaGCTTCCTTTGATCCTACAG +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHMEAHY*LPLILQ
Trigger: CTGTAGGATCAAAGGAAGCCAATAATGGGCCTCCAT...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGCATTCCATGCACACTaGCATACAGATCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTAFHAH*HTDHQG
Trigger: ACCCTGATGATCTGTATGTCAGTGTGCATGGAATGC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCCCACTGGGCGATTTTaGCCTGGGAAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFPTGRF*PGKCLR
Trigger: CCTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAGTCAGCCTCATTTCTaGACTCTACAAAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPSQPHF*TLQSLR
Trigger: GCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAGTCAGCCTCATTTCTaGACTCTACAAAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTSQPHF*TLQSLR
Trigger: GCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACCCTCTGGTCATAGCTaGAGTTCTGCAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTPSGHS*SSAVFF
Trigger: GAAAAAGACTGCAGAACTTCAGCTATGACCAGAGGG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGATTCAAGGGCGGCATaGCCGACATGGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKDSRAA*PTWVAV
Trigger: CACTGCCACCCATGTCGGGCATGCCGCCCTTGAATC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATGTTCAAATTCATAGGTaGTCCAGAGCCATTCATTCC +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHVQIHR*SRAIHS
Trigger: GGAATGAATGGCTCTGGAGCACCTATGAATTTGAAC...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAAAGCCTTCGCCAGTTaGTTTCCCATTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTKAFAS*FPIGSI
Trigger: TATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAAAGCCTTCGCCAGTTaGTTTCCCATTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPKAFAS*FPIGSI
Trigger: TATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGGTGGCCCACCCAAATaGCCAGGGGCACTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLGGPPK*PGALPR
Trigger: TCTTGGAAGTGCCCCTGGGCATTTGGGTGGGCCACC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGATTTTCCAGAACTAGATaGAAAGCCAGGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGFSRTR*KARGTT
Trigger: GGTGGTCCCCCTGGCTTTGCATCTAGTTCTGGAAAA...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTTTTCCAGAACTAGATaGAAAGCCAGGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYFSRTR*KARGTT
Trigger: GGTGGTCCCCCTGGCTTTGCATCTAGTTCTGGAAAA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAAATCCAGAGAAGAAGTaGCGAATGTCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGNPEKK*RMSMVP
Trigger: GGGGACCATGGACATTCGCCACTTCTTCTCTGGATT...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAAATTGGAGGAATTGGTaGCGGCGGGACTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGNWRNW*RRDCVH
Trigger: ATGAACACAGTCCCGCCGCCACCAATTCCTCCAATT...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACAGAGATGGCATCGCTaGAATTGGAGGAATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGQRWHR*NWRNWW
Trigger: CCACCAATTCCTCCAATTCCAGCGATGCCATCTCTG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCAGAGATGGCATCGCTaGAATTGGAGGAATTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYQRWHR*NWRNWW
Trigger: CCACCAATTCCTCCAATTCCAGCGATGCCATCTCTG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGGAGGAACTGGAATTaGGGGAATGGATGGCATTGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRRNWN*GNGWHW
Trigger: CCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTAGGCAATGTAGGTACTaGAGGAGGAACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPRQCRY*RRNWNW
Trigger: CCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTGGCACAGAAGGAACTaGGGGAATCGGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKWHRRN*GNRGHR
Trigger: CCTGTGCCCCCGATTCCCCCAGTTCCTTCTGTGCCA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACGACATGGGTGGCAGTaGGGTCATGGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLRHGWQ*GHGWHR
Trigger: TCTGTGCCACCCATGACCCCACTGCCACCCATGTCG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCAC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTCLKVI*PPAATH
Trigger: GTGGGTAGCTGCTGGAGGCCATATCACTTTTAAGCA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTATCTTTTCTGCCCACTaGGCGATTTTGACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTIFSAH*AILTWE
Trigger: TTCCCAGGTCAAAATCGCCCAGTGGGCAGAAAAGAT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAATCTTTTCTGCCCACTaGGCGATTTTGACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTIFSAH*AILTWE
Trigger: TTCCCAGGTCAAAATCGCCCAGTGGGCAGAAAAGAT...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCTCAATTTTCTCCTCTaGCGGCTGCACTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTLNFLL*RLHLYS
Trigger: AGAGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACAACCAGAACTCATGTaGTCCTCCTGCCTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGQPELM*SSCLSV
Trigger: GACACTAAGGCAGGAGGACCACATGAGTTCTGGTTG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCAGTGGCAAAAACGATaGAAGCCTCACCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVQWQKR*KPHPVH
Trigger: GTGAACTGGGTGAGGCTTTCATCGTTTTTGCCACTG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAGCATTCCATGCACACTaGCATACAGATCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSAFHAH*HTDHQG
Trigger: ACCCTGATGATCTGTATGTCAGTGTGCATGGAATGC...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATAGTCAGCCTCATTTCTaGACTCTACAAAGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYSQPHF*TLQSLR
Trigger: GCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCCAAAGAAAAGAGTATaGAAGGGTCAAGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTPKKRV*KGQESQ
Trigger: TTGAGATTCTTGACCCTTTCATACTCTTTTCTTTGG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp TGCTTACTTCCATACAGTCCTAGATTTTCATCCAGTGGGTTAAGACTGGCCTTATGCCAAGGCAGTATTTaGTGGCAATGTTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CLLPYSPRFSSSGLRLALCQGSI*WQCCGH
Trigger: ATGGCCACAACATTGCCAGCAAATACTGCCTTGGCA...TAAGGCCAGTCTTAACCCACTGGATGAAAATCTAGGACTGTATGGAAGTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATGTGGTATATCTAAGTTaGCAGTTTCAAAACGCCTAC +
Preference number: 4 (lower is better)
Translates to: DAKAVFAGNVVAILATSHVVYLS*QFQNAY
Trigger: GTAGGCGTTTTGAAACTGCCAACTTAGATATACCAC...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGTGGTCCTGATCTACTaGCATTTGCTGGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTVVLIY*HLLVVY
Trigger: ATATACCACCAGCAAATGCCAGTAGATCAGGACCAC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTAGTTGGATACTGTTGTaGGCAAGTTTACCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTSWILL*ASLPCY
Trigger: GTAGCAGGGTAAACTTGCCCACAACAGTATCCAACT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGAGCTGTTCCTACGCTaGCTGTGGAAAATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGELFLR*LWKMSV
Trigger: TACAGACATTTTCCACAGCCAGCGTAGGAACAGCTC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TGCTTACTTCCATACAGTCCTAGATTTTCATCCAGTGGGTTAAGACTGGCCTTAGAGCTGTTCCTACGCTaGCTGTGGAAAATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: CLLPYSPRFSSSGLRLALELFLR*LWKMSV
Trigger: TACAGACATTTTCCACAGCCAGCGTAGGAACAGCTC...TAAGGCCAGTCTTAACCCACTGGATGAAAATCTAGGACTGTATGGAAGTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACGGGACTGTGTTCATTaGAGAGGCTGTGCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVRDCVH*RGCAWN
Trigger: GTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTAATTGGAGGAATTGGTaGCGGCGGGACTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVNWRNW*RRDCVH
Trigger: ATGAACACAGTCCCGCCGCCACCAATTCCTCCAATT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTGGCATCGCTGGAATTaGAGGAATTGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKWHRWN*RNWWRR
Trigger: CCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAAGGGTTGATGGGGAGTaGCTTCACACTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVRVDGE*LHTALR
Trigger: TCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGATGCTTAAAAGTGATATaGCCTCCAGCAGCTACCCAC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGCLKVI*PPAATH
Trigger: GTGGGTAGCTGCTGGAGGCCATATCACTTTTAAGCA...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTGGGCGATTTTGACCTaGGAAGTGTCTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFWAILT*EVSEEG
Trigger: CCCCTCCTCAGACACTTCCCAGGTCAAAATCGCCCA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACGCATTGGGCATTCCTaGAACTGCAGGATTACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVRIGHS*NCRITW
Trigger: CCAGGTAATCCTGCAGTTCCAGGAATGCCCAATGCG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTCCATGGCTTCACCTGTaGGCATACCTTTTTCATTGT +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPPWLHL*AYLFHC
Trigger: ACAATGAAAAAGGTATGCCCACAGGTGAAGCCATGG...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCGCTAGGTGGTGGTCCTaGTCTACTGGCATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFARWWS*STGICW
Trigger: CCAGCAAATGCCAGTAGATCAGGACCACCACCTAGC...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTGTGCTTGGAACAGTTaGGCTAAACGTTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFCAWNS*AKRWAP
Trigger: GGGAGCCCAACGTTTAGCTCAACTGTTCCAAGCACA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACCCATGTACTGTTTATaGCGACACAGAGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKPMYCL*RHRAAL
Trigger: TAAGGCTGCTCTGTGTCGTCATAAACAGTACATGGG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAATGGCCCAAAGGCATTTaGTCCACCAAAATTACCAGG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKWPKGI*STKITR
Trigger: CCTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCA...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTGTCATTTAAGTCAATaGCAGCAGCTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTCHLSQ*QQLWLH
Trigger: ATGAAGCCACAGCTGCTGTCATTGACTTAAATGACA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAAGGCAAGTGTTTTCATaGCAAGGACACTTACCAACC +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGRQVFS*QGHLPT
Trigger: GGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCT...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTATTTCAGTGTTCCACTaGCTCACAACACCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTISVFH*LTTPKR
Trigger: CCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAAT...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAACAAAAACCTCTGCTaGGTGATGCCAAGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSNKNLC*VMPRQY
Trigger: ATACTGCCTTGGCATCACTCAGCAGAGGTTTTTGTT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACATCATACCAAGCCTTaGATCTTCATCAGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTHHTKP*IFISGK
Trigger: TTTGCCACTGATGAAGATGCAAGGCTTGGTATGATG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGTTCAATCATATTCTaGATTTCCGTCTTACTACTC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTSSIIF*ISVLLL
Trigger: GAGTAGTAAGACGGAAATGCAGAATATGATTGAACT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGACCTTGATCTTTTCTaGCCACTGGGCGATTTTGAC +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVDLDLF*PLGDFD
Trigger: GTCAAAATCGCCCAGTGGGCAGAAAAGATCAAGGTC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGGGCATTCCTGGAACTaGAGGATTACCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKGHSWN*RITWHR
Trigger: CCTGTGCCAGGTAATCCTGCAGTTCCAGGAATGCCC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTGCACTAGGTATTCCTaGACTGGGCATTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFCTRYS*TGHSRT
Trigger: GGTGCGGGAATGCCCAGTGCAGGAATACCTAGTGCA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTATGCTCTTCACCTCCTaGACTAGGTATTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVMLFTS*TRYSCT
Trigger: AGTGCAGGAATACCTAGTGCAGGAGGTGAAGAGCAT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCCAACAAAACAGTTCTaGTCATTTACAAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTPTKQF*SFTNES
Trigger: TGACTCATTTGTAAATGAGCAGAACTGTTTTGTTGG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGGTCCCCGCCACAATTaGGAGACCTTGCAAACGGAT +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLGPRHN*ETLQTD
Trigger: ATCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKSGECP*SPPQLG
Trigger: TCCCAATTGTGGCGGGGACCATGGACATTCGCCACT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGTGGTCCTGATCTACTaGCATTTGCTGGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGVVLIY*HLLVVY
Trigger: ATATACCACCAGCAAATGCCAGTAGATCAGGACCAC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGTGGTCCTGATCTACTaGCATTTGCTGGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYVVLIY*HLLVVY
Trigger: ATATACCACCAGCAAATGCCAGTAGATCAGGACCAC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGGAAGCCCCCATATTTaGAGGAGCTGTTCCTACGCT +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFGSPHI*RSCSYA
Trigger: AGCGTAGGAACAGCTCCTCCAAATATGGGGGCTTCC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTGGAATTGGAGGAATTaGTGGCGGCGGGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFWNWRN*WRRDCV
Trigger: AACACAGTCCCGCCGCCACCAATTCCTCCAATTCCA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGGGAATGGATGGCATTaGTGGCAGAGATGGCATCGC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKGNGWH*WQRWHR
Trigger: GCGATGCCATCTCTGCCACCAATGCCATCCATTCCC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAAATTGGGGGAATGGATaGCATTGGTGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVNWGNG*HWWQRW
Trigger: CCATCTCTGCCACCAATGCCATCCATTCCCCCAATT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTGGGCGATTTTGACCTaGGAAGTGTCTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFWAILT*EVSEEG
Trigger: CCCCTCCTCAGACACTTCCCAGGTCAAAATCGCCCA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCTTTGTAATGCTGAATaGAATATTTGTTATGTGGGC +
Preference number: 4 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTLCNAE*NICYVG
Trigger: GCCCACATAACAAATATTCCATTCAGCATTACAAAG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAGGCAGTCCTGCACTaGTTATTGCTGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQAVLH*LLLNQA
Trigger: TGCCTGGTTCAGCAATAACCAGTGCAGGACTGCCTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCTCAATTTTCTCCTCTaGCGGCTGCACTTGTACTCT +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVLNFLL*RLHLYS
Trigger: AGAGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACAACCAGAACTCATGTaGTCCTCCTGCCTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVQPELM*SSCLSV
Trigger: GACACTAAGGCAGGAGGACCACATGAGTTCTGGTTG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACCAGTAAAAGGGAGCTaGAATTTAAGGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSPVKGS*NLRLSR
Trigger: GCGTGAAAGCCTTAAATTCCAGCTCCCTTTTACTGG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAATTGCTGGCAATGTTGTaGCCATATTGGCAACAAGCC +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKLLAML*PYWQQA
Trigger: GGCTTGTTGCCAATATGGCCACAACATTGCCAGCAA...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGGCTTCACACTGCTCTaGGAGTTCATCTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLGFTLL*EFIWIG
Trigger: CCCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTATGGCCCAAAGGCATTTaGTCCACCAAAATTACCAGG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVWPKGI*STKITR
Trigger: CCTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCA...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTGTCATTTAAGTCAATaGCAGCAGCTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYCHLSQ*QQLWLH
Trigger: ATGAAGCCACAGCTGCTGTCATTGACTTAAATGACA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYVYPGE*VFCKQS
Trigger: TGACTGTTTACAGAAGACTCACTCACCAGGATAAAC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACAAGAGCACCCTCAATaGGTTCTACTGACATTTCTA +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSQEHPQ*VLLTFL
Trigger: TAGAAATGTCAGTAGAACTCATTGAGGGTGCTCTTG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACAAAGCAGCAACTTCTaGAGCAGGACTGTCTATACA +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKQSSNF*SRTVYT
Trigger: TGTATAGACAGTCCTGCTTCAGAAGTTGCTGCTTTG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAATTTCAGTGTTCCACTaGCTCACAACACCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSISVFH*LTTPKR
Trigger: CCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAAT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCACAATTGGGAGACCTTaGAAACGGATGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFTIGRP*KRMTTA
Trigger: GGCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGGAGTGGCTTCACACTaGTCTGAGAGTTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFGVASH*SESSSG
Trigger: TCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAATTTCAACAAATGCACTaGATCAACACGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKFQQMH*INTEPM
Trigger: CATGGGCTCCGTGTTGATGCAGTGCATTTGTTGAAA...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGCCTGTCCTAGACCTTaGCCATTGTTATCAACAAGA +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVACPRP*PLLSTR
Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGACAGGC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAAGTTGGATACTGTTGTaGGCAAGTTTACCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKSWILL*ASLPCY
Trigger: GTAGCAGGGTAAACTTGCCCACAACAGTATCCAACT...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACGGGACTGTGTTCATTaGAGAGGCTGTGCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLRDCVH*RGCAWN
Trigger: GTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCATTGGTGGCAGAGATaGCATCGCTGGAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKHWWQR*HRWNWR
Trigger: CCTCCAATTCCAGCGATGCCATCTCTGCCACCAATG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCATTGGTGGCAGAGATaGCATCGCTGGAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFHWWQR*HRWNWR
Trigger: CCTCCAATTCCAGCGATGCCATCTCTGCCACCAATG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAATGGATGGCATTGGTaGCAGAGATGGCATCGCTGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFNGWHW*QRWHRW
Trigger: CCAGCGATGCCATCTCTGCCACCAATGCCATCCATT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCAGGCAGTCCTGCACTaGTTATTGCTGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFQAVLH*LLLNQA
Trigger: TGCCTGGTTCAGCAATAACCAGTGCAGGACTGCCTG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCACTCAAAGGCCACCATaGCTTCACCTGTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFTQRPP*LHLWAY
Trigger: GTATGCCCACAGGTGAAGCCATGGTGGCCTTTGAGT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGATGCTTTGACAACTTaGAGTACAAAGCTAGGAACT +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPDALTT*STKLGT
Trigger: AGTTCCTAGCTTTGTACTCCAAGTTGTCAAAGCATC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR CAA 72 bp TTCCCGAGTGTTCTTAAAATTGATGAGATTTTACACTaGGCCCATACCTGTACACAACCACAGACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FPSVLKIDEILH*AHTCTQPQTPV
Trigger: TACTGGAGTCTGTGGTTGTGTACAGGTATGGGCCAAGTGTAAAATCTCATCAATTTTAAGAACACTCGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCCCATGTACTGTTTATaGCGACACAGAGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFPMYCL*RHRAAL
Trigger: TAAGGCTGCTCTGTGTCGTCATAAACAGTACATGGG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTTCTAGGGTAACTACATaGACAAAAGCTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVSRVTT*TKASLP
Trigger: TGGGAGAGAAGCTTTTGTTCATGTAGTTACCCTAGA...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAATCTAGGGTAACTACATaGACAAAAGCTTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKSRVTT*TKASLP
Trigger: TGGGAGAGAAGCTTTTGTTCATGTAGTTACCCTAGA...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVVYPGE*VFCKQS
Trigger: TGACTGTTTACAGAAGACTCACTCACCAGGATAAAC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTTATAACACTTTCTTATaGATGGGCCCCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPYNTFL*MGPSLF
Trigger: AAACAAAGAGGGGCCCATTCATAAGAAAGTGTTATA...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCACTTGTACTCTGTATaGAGACTTTTAGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTHLYSV*RLLVNR
Trigger: CCTGTTTACTAAAAGTCTTCATACAGAGTACAAGTG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAAGGCAAGTGTTTTCATaGCAAGGACACTTACCAACC +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVRQVFS*QGHLPT
Trigger: GGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAACAATTGGGAGACCTTaGAAACGGATGACCACAGCC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLTIGRP*KRMTTA
Trigger: GGCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTATTTCAACAAATGCACTaGATCAACACGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVFQQMH*INTEPM
Trigger: CATGGGCTCCGTGTTGATGCAGTGCATTTGTTGAAA...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGACCTTGATCTTTTCTaGCCACTGGGCGATTTTGAC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFDLDLF*PLGDFD
Trigger: GTCAAAATCGCCCAGTGGGCAGAAAAGATCAAGGTC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTTTTCCAGAACTAGATaGAAAGCCAGGGGGACCACC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKFSRTR*KARGTT
Trigger: GGTGGTCCCCCTGGCTTTGCATCTAGTTCTGGAAAA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAGCATCCTTGTTTTTATaGAAGGCTGACTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSASLFL*KADYFH
Trigger: GTGGAAATAGTCAGCCTTGCATAAAAACAAGGATGC...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAAATCCAGAGAAGAAGTaGCGAATGTCCATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLNPEKK*RMSMVP
Trigger: GGGGACCATGGACATTCGCCACTTCTTCTCTGGATT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGATTCCTACGCTGGCTGTaGAAAATGTCTGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGFLRWL*KMSVCF
Trigger: AAAACATACAGACATTTTCCACAGCCAGCGTAGGAA...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCATCTTTTCTGCCCACTaGGCGATTTTGACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFIFSAH*AILTWE
Trigger: TTCCCAGGTCAAAATCGCCCAGTGGGCAGAAAAGAT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAATGGAGGCCCATTATTaGCTTCCTTTGATCCTACAG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVMEAHY*LPLILQ
Trigger: CTGTAGGATCAAAGGAAGCCAATAATGGGCCTCCAT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAACCAGGAAAGTTAAATaGAGGCCCATTATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKTRKVK*RPIIGF
Trigger: GAAGCCAATAATGGGCCTCCATTTAACTTTCCTGGT...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAAATTACTGTCGGTCCTaGTTTTCCAGAACTAGATGC +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKNYCRS*FSRTRC
Trigger: GCATCTAGTTCTGGAAAACCAGGACCGACAGTAATT...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCAACCAGAACTCATGTaGTCCTCCTGCCTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFQPELM*SSCLSV
Trigger: GACACTAAGGCAGGAGGACCACATGAGTTCTGGTTG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAATGTTGTGGCCATATTaGCAACAAGCCATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSMLWPY*QQAILL
Trigger: CAACAAAATGGCTTGTTGCCAATATGGCCACAACAT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACAAGGCAGTATTTGCTaGCAATGTTGTGGCCATATT +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKQGSIC*QCCGHI
Trigger: AATATGGCCACAACATTGCCAGCAAATACTGCCTTG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGCATTCCATGCACACTaGCATACAGATCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKAFHAH*HTDHQG
Trigger: ACCCTGATGATCTGTATGTCAGTGTGCATGGAATGC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCCCTCTGGTCATAGCTaGAGTTCTGCAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKPSGHS*SSAVFF
Trigger: GAAAAAGACTGCAGAACTTCAGCTATGACCAGAGGG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCCCTCTGGTCATAGCTaGAGTTCTGCAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFPSGHS*SSAVFF
Trigger: GAAAAAGACTGCAGAACTTCAGCTATGACCAGAGGG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTGGCCCAAAGGCATTTaGTCCACCAAAATTACCAGG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKWPKGI*STKITR
Trigger: CCTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTACAAGAGCACCCTCAATaGGTTCTACTGACATTTCTA +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVQEHPQ*VLLTFL
Trigger: TAGAAATGTCAGTAGAACTCATTGAGGGTGCTCTTG...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACACTTGTACTCTGTATaGAGACTTTTAGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGHLYSV*RLLVNR
Trigger: CCTGTTTACTAAAAGTCTTCATACAGAGTACAAGTG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCCAAAGAAAAGAGTATaGAAGGGTCAAGAATCTCAA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYPKKRV*KGQESQ
Trigger: TTGAGATTCTTGACCCTTTCATACTCTTTTCTTTGG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAACATTTTCAGAGCATTaGCTAGGGAAAGTAACCATA +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSTFSEH*LGKVTI
Trigger: TATGGTTACTTTCCCTAGTCAATGCTCTGAAAATGT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAAAACCTCTGCTGAGTaGTGCCAAGGCAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKKTSAE*CQGSIC
Trigger: GCAAATACTGCCTTGGCATCACTCAGCAGAGGTTTT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAAAGCCTTCGCCAGTTaGTTTCCCATTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKKAFAS*FPIGSI
Trigger: TATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGCCTGTCCTAGACCTTaGCCATTGTTATCAACAAGA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFACPRP*PLLSTR
Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGACAGGC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGCGTTCAGACTTACGTaGATCATCTTCATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTAFRLT*IIFIFK
Trigger: TTTAAAAATGAAGATGATGCACGTAAGTCTGAACGC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGATGCTCTTCACCTCCTaGACTAGGTATTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKMLFTS*TRYSCT
Trigger: AGTGCAGGAATACCTAGTGCAGGAGGTGAAGAGCAT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCCAACAAAACAGTTCTaGTCATTTACAAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTPTKQF*SFTNES
Trigger: TGACTCATTTGTAAATGAGCAGAACTGTTTTGTTGG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTTCTCCTCTGGCGGCTaGACTTGTACTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKFSSGG*TCTLYE
Trigger: TTCATACAGAGTACAAGTGCAGCCGCCAGAGGAGAA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTATTCTCCTCTGGCGGCTaGACTTGTACTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLFSSGG*TCTLYE
Trigger: TTCATACAGAGTACAAGTGCAGCCGCCAGAGGAGAA...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTTCTCCTCTGGCGGCTaGACTTGTACTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFFSSGG*TCTLYE
Trigger: TTCATACAGAGTACAAGTGCAGCCGCCAGAGGAGAA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTTTCCTACGCTGGCTGTaGAAAATGTCTGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVFLRWL*KMSVCF
Trigger: AAAACATACAGACATTTTCCACAGCCAGCGTAGGAA...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGAGCTGTTCCTACGCTaGCTGTGGAAAATGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLELFLR*LWKMSV
Trigger: TACAGACATTTTCCACAGCCAGCGTAGGAACAGCTC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAGGCAATGTAGGTACTaGAGGAGGAACTGGAATTGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFRQCRY*RRNWNW
Trigger: CCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCAGTTGCTTTCCCATTaGGTCCATAAGCTATATAAA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYQLLSH*VHKLYK
Trigger: TTTATATAGCTTATGGACCCAATGGGAAAGCAACTG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACTTTGTAATGCTGAATaGAATATTTGTTATGTGGGC +
Preference number: 4 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTLCNAE*NICYVG
Trigger: GCCCACATAACAAATATTCCATTCAGCATTACAAAG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAACACTTTCTTATGAATaGGCCCCTCTTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSTLSYE*APLCLK
Trigger: CTTTAAACAAAGAGGGGCCCATTCATAAGAAAGTGT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATACACTTTCTTATGAATaGGCCCCTCTTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYTLSYE*APLCLK
Trigger: CTTTAAACAAAGAGGGGCCCATTCATAAGAAAGTGT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTATTTGTAGGAAATGTTaGGGATGTTTCAAACGAAGA +
Preference number: 4 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPICRKC*GCFKRR
Trigger: TCTTCGTTTGAAACATCCCCAACATTTCCTACAAAT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTTGGTTTCTAAAGTCTaGACTACTATAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYLVSKV*TTIELP
Trigger: TGGCAGTTCTATAGTAGTCCAGACTTTAGAAACCAA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374114.8
3UTR CAA 72 bp TTGTGGCCATATTGGCAACAAGCCATTTTGTTGTGTTaGGTTTCTAAAGTCTGGACTACTATAGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LWPYWQQAILLC*VSKVWTTIELP
Trigger: TGGCAGTTCTATAGTAGTCCAGACTTTAGAAACCAAACACAACAAAATGGCTTGTTGCCAATATGGCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGATTATTGGCTTCCTTTaGTCCTACAGTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKIIGFL*SYSQEG
Trigger: GCCTTCCTGACTGTAGGATCAAAGGAAGCCAATAAT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAATTATTGGCTTCCTTTaGTCCTACAGTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLIIGFL*SYSQEG
Trigger: GCCTTCCTGACTGTAGGATCAAAGGAAGCCAATAAT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCAAAGCAGCAACTTCTaGAGCAGGACTGTCTATACA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKQSSNF*SRTVYT
Trigger: TGTATAGACAGTCCTGCTTCAGAAGTTGCTGCTTTG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTACATTTTCAGAGCATTaGCTAGGGAAAGTAACCATA +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVTFSEH*LGKVTI
Trigger: TATGGTTACTTTCCCTAGTCAATGCTCTGAAAATGT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGCAGGAAGAGAGGTATaGGTAGTTTCACAGAATACA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFAGREV*VVSQNT
Trigger: TGTATTCTGTGAAACTACTCATACCTCTCTTCCTGC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR TCA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAAAATGCACACAACTTTaGGCAAAGCTTTACAAATCC +
Preference number: 4 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKKCTQL*AKLYKS
Trigger: GGATTTGTAAAGCTTTGCTCAAAGTTGTGTGCATTT...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGTTCAATCATATTCTaGATTTCCGTCTTACTACTC +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSSSIIF*ISVLLL
Trigger: GAGTAGTAAGACGGAAATGCAGAATATGATTGAACT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR GCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTTTCAACAAATGCACTaGATCAACACGGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKFQQMH*INTEPM
Trigger: CATGGGCTCCGTGTTGATGCAGTGCATTTGTTGAAA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGGAAAACAATCTGGATaGATTAATCACAGCAATATG +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGGKQSG*INHSNM
Trigger: CATATTGCTGTGATTAATGCATCCAGATTGTTTTCC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAGTTGGATACTGTTGTaGGCAAGTTTACCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFSWILL*ASLPCY
Trigger: GTAGCAGGGTAAACTTGCCCACAACAGTATCCAACT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTCAGTTGCTTTCCCATTaGGTCCATAAGCTATATAAA +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVQLLSH*VHKLYK
Trigger: TTTATATAGCTTATGGACCCAATGGGAAAGCAACTG...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAATGGAGGCCCATTATTaGCTTCCTTTGATCCTACAG +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLMEAHY*LPLILQ
Trigger: CTGTAGGATCAAAGGAAGCCAATAATGGGCCTCCAT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCCATGGCTTCACCTGTaGGCATACCTTTTTCATTGT +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKPWLHL*AYLFHC
Trigger: ACAATGAAAAAGGTATGCCCACAGGTGAAGCCATGG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCACAATGCTCTATGTTATaGAAACCAAGCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSQCSML*KPSYMQ
Trigger: TTGCATATAGCTTGGTTTCCATAACATAGAGCATTG...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CCA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCAATGCTCTATGTTATaGAAACCAAGCTATATGCAA +
Preference number: 4 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYQCSML*KPSYMQ
Trigger: TTGCATATAGCTTGGTTTCCATAACATAGAGCATTG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAAAAATAGCTTTCCAATaGAGAAAATATCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGKIAFQ*RKYLWL
Trigger: CAGCCACAGATATTTTCTCCATTGGAAAGCTATTTT...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCTGTCATTTAAGTCAATaGCAGCAGCTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFCHLSQ*QQLWLH
Trigger: ATGAAGCCACAGCTGCTGTCATTGACTTAAATGACA...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGTTTATCCTGGTGAGTaGGTCTTCTGTAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKVYPGE*VFCKQS
Trigger: TGACTGTTTACAGAAGACTCACTCACCAGGATAAAC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCATTTCAGTGTTCCACTaGCTCACAACACCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFISVFH*LTTPKR
Trigger: CCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAAT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCATCATACCAAGCCTTaGATCTTCATCAGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFHHTKP*IFISGK
Trigger: TTTGCCACTGATGAAGATGCAAGGCTTGGTATGATG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTAGTTCAATCATATTCTaGATTTCCGTCTTACTACTC +
Preference number: 4 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVSSIIF*ISVLLL
Trigger: GAGTAGTAAGACGGAAATGCAGAATATGATTGAACT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGTTCAAATTCATAGGTaGTCCAGAGCCATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLVQIHR*SRAIHS
Trigger: GGAATGAATGGCTCTGGAGCACCTATGAATTTGAAC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAAAACTGAAACTCCAATaGCCAGAACAAGATAAACAG +
Preference number: 4 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVKLKLQ*PEQDKQ
Trigger: CTGTTTATCTTGTTCTGGGCATTGGAGTTTCAGTTT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGTGGTATATCTAAGTTaGCAGTTTCAAAACGCCTAC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFVVYLS*QFQNAY
Trigger: GTAGGCGTTTTGAAACTGCCAACTTAGATATACCAC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGACCAGGAAAGTTAAATaGAGGCCCATTATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKTRKVK*RPIIGF
Trigger: GAAGCCAATAATGGGCCTCCATTTAACTTTCCTGGT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAACCAGGAAAGTTAAATaGAGGCCCATTATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLTRKVK*RPIIGF
Trigger: GAAGCCAATAATGGGCCTCCATTTAACTTTCCTGGT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAATTACTGTCGGTCCTaGTTTTCCAGAACTAGATGC +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKNYCRS*FSRTRC
Trigger: GCATCTAGTTCTGGAAAACCAGGACCGACAGTAATT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAATTACTGTCGGTCCTaGTTTTCCAGAACTAGATGC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFNYCRS*FSRTRC
Trigger: GCATCTAGTTCTGGAAAACCAGGACCGACAGTAATT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCAGTAACTACACTGGGTaGTGGATTATTAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFSNYTG*WIIKVG
Trigger: TCCAACTTTAATAATCCATCACCCAGTGTAGTTACT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGAAGGTCCCATATTTTaGTTAAAAGTGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFEGPIF*LKVIWP
Trigger: AGGCCATATCACTTTTAAGCAAAATATGGGACCTTC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCGTGGTATATCTAAGTTaGCAGTTTCAAAACGCCTAC +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFVVYLS*QFQNAY
Trigger: GTAGGCGTTTTGAAACTGCCAACTTAGATATACCAC...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTATTCCTACGCTGGCTGTaGAAAATGTCTGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLFLRWL*KMSVCF
Trigger: AAAACATACAGACATTTTCCACAGCCAGCGTAGGAA...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAGTAACTACACTGGGTaGTGGATTATTAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFSNYTG*WIIKVG
Trigger: TCCAACTTTAATAATCCATCACCCAGTGTAGTTACT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAGTAACTACACTGGGTaGTGGATTATTAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKSNYTG*WIIKVG
Trigger: TCCAACTTTAATAATCCATCACCCAGTGTAGTTACT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTATAACACTTTCTTATaGATGGGCCCCTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKYNTFL*MGPSLF
Trigger: AAACAAAGAGGGGCCCATTCATAAGAAAGTGTTATA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACACTTGTACTCTGTATaGAGACTTTTAGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLHLYSV*RLLVNR
Trigger: CCTGTTTACTAAAAGTCTTCATACAGAGTACAAGTG...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR TCA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTCGAATTTTCATTGTTaGTGCTTTGACAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKSNFHC*CFDNLE
Trigger: CTCCAAGTTGTCAAAGCATCAACAATGAAAATTCGA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGAAGGTCCCATATTTTaGTTAAAAGTGATATGGCCT +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLEGPIF*LKVIWP
Trigger: AGGCCATATCACTTTTAAGCAAAATATGGGACCTTC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCTTTGTAATGCTGAATaGAATATTTGTTATGTGGGC +
Preference number: 4 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFLCNAE*NICYVG
Trigger: GCCCACATAACAAATATTCCATTCAGCATTACAAAG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAACACTTTCTTATGAATaGGCCCCTCTTTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLTLSYE*APLCLK
Trigger: CTTTAAACAAAGAGGGGCCCATTCATAAGAAAGTGT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 72 bp CAATGCTCTATGTTATGGAAACCAAGCTATATGCAATaGAAACAATCCACAGGTTCTAACCTGGAAATACTA +
Preference number: 4 (lower is better)
Translates to: QCSMLWKPSYMQ*KQSTGSNLEIL
Trigger: TAGTATTTCCAGGTTAGAACCTGTGGATTGTTTCAATTGCATATAGCTTGGTTTCCATAACATAGAGCATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 72 bp AAGGCCAAAATTTCACATAATCGGGACAGGAGGAAATaGATACTACAATTAGTCCATATGAAAAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: KAKISHNRDRRK*ILQLVHMKRTS
Trigger: TGAAGTCCTTTTCATATGGACTAATTGTAGTATCAATTTCCTCCTGTCCCGATTATGTGAAATTTTGGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
3UTR CAA 72 bp CATGAATTATCAAAAGACCCACAACATAGTCACCTCTaGAGTCTAAACAATCCTTCTCTTAAACAAAAATCC +
Preference number: 4 (lower is better)
Translates to: HELSKDPQHSHL*SLNNPSLKQKS
Trigger: GGATTTTTGTTTAAGAGAAGGATTGTTTAGACTCAAGAGGTGACTATGTTGTGGGTCTTTTGATAATTCATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCGCGTTCAGACTTACGTaGATCATCTTCATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFAFRLT*IIFIFK
Trigger: TTTAAAAATGAAGATGATGCACGTAAGTCTGAACGC...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGCGTTCAGACTTACGTaGATCATCTTCATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLAFRLT*IIFIFK
Trigger: TTTAAAAATGAAGATGATGCACGTAAGTCTGAACGC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR GCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCGGAAAACAATCTGGATaGATTAATCACAGCAATATG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFGKQSG*INHSNM
Trigger: CATATTGCTGTGATTAATGCATCCAGATTGTTTTCC...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAATTTGTAGGAAATGTTaGGGATGTTTCAAACGAAGA +
Preference number: 4 (lower is better)
Translates to: LTRINLRTSIRIFYSILLICRKC*GCFKRR
Trigger: TCTTCGTTTGAAACATCCCCAACATTTCCTACAAAT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCATTTGTAGGAAATGTTaGGGATGTTTCAAACGAAGA +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFICRKC*GCFKRR
Trigger: TCTTCGTTTGAAACATCCCCAACATTTCCTACAAAT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CCA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAAAATAGCTTTCCAATaGAGAAAATATCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFKIAFQ*RKYLWL
Trigger: CAGCCACAGATATTTTCTCCATTGGAAAGCTATTTT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 90 bp GGGCACAGGAGGCACAGGAGGCAATGTAGGTACTGGAGGAGGAACTaGAATTGGGGGAATGGATGGCATTGGTGGCAGAGATGGCATCGC +
Preference number: 5 (lower is better)
Translates to: GHRRHRRQCRYWRRN*NWGNGWHWWQRWHR
Trigger: GCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCTCCTGTGCCTCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp GGATGGCATTGGTGGCAGAGATGGCATCGCTGGAATTGGAGGAATTaGTGGCGGCGGGACTGTGTTCATTGGAGAGGCTGTGCTTGGAAC +
Preference number: 5 (lower is better)
Translates to: GWHWWQRWHRWNWRN*WRRDCVHWRGCAWN
Trigger: GTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp TGGGGGAATGGATGGCATTGGTGGCAGAGATGGCATCGCTGGAATTaGAGGAATTGGTGGCGGCGGGACTGTGTTCATTGGAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: WGNGWHWWQRWHRWN*RNWWRRDCVHWRGC
Trigger: ACAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS TCA 90 bp TGGCGGCGGGACTGTGTTCATTGGAGAGGCTGTGCTTGGAACAGTTaGGCTAAACGTTGGGCTCCCAAAGGAAGCCCCCATATTTGGAGG +
Preference number: 5 (lower is better)
Translates to: WRRDCVHWRGCAWNS*AKRWAPKGSPHIWR
Trigger: CCTCCAAATATGGGGGCTTCCTTTGGGAGCCCAACGTTTAGCTCAACTGTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCGCCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp TGGCATTGGTGGCAGAGATGGCATCGCTGGAATTGGAGGAATTGGTaGCGGCGGGACTGTGTTCATTGGAGAGGCTGTGCTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: WHWWQRWHRWNWRNW*RRDCVHWRGCAWNS
Trigger: ACTGTTCCAAGCACAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp AGGAGGAACTGGAATTGGGGGAATGGATGGCATTGGTGGCAGAGATaGCATCGCTGGAATTGGAGGAATTGGTGGCGGCGGGACTGTGTT +
Preference number: 5 (lower is better)
Translates to: RRNWNWGNGWHWWQR*HRWNWRNWWRRDCV
Trigger: AACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp TGGAATTGGGGGAATGGATGGCATTGGTGGCAGAGATGGCATCGCTaGAATTGGAGGAATTGGTGGCGGCGGGACTGTGTTCATTGGAGA +
Preference number: 5 (lower is better)
Translates to: WNWGNGWHWWQRWHR*NWRNWWRRDCVHWR
Trigger: TCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 90 bp AGGAGGCACAGGAGGCAATGTAGGTACTGGAGGAGGAACTGGAATTaGGGGAATGGATGGCATTGGTGGCAGAGATGGCATCGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RRHRRQCRYWRRNWN*GNGWHWWQRWHRWN
Trigger: ATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCTCCTGTGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGACCACCAATATGGATaGGGCCAGGGCCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTDHQYG*GQGRGR
Trigger: CCGGCCCCGGCCCTGGCCCAATCCATATTGGTGGTC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS GCA 90 bp GGAGGCCCATTATTGGCTTCCTTTGATCCTACAGTCAGGAAGGCATaGTCTTCACCTCCTGCACTAGGTATTCCTGCACTGGGCATTCCC +
Preference number: 5 (lower is better)
Translates to: GGPLLASFDPTVRKA*SSPPALGIPALGIP
Trigger: GGGAATGCCCAGTGCAGGAATACCTAGTGCAGGAGGTGAAGAGCATGCCTTCCTGACTGTAGGATCAAAGGAAGCCAATAATGGGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 90 bp AGGCAATGTAGGTACTGGAGGAGGAACTGGAATTGGGGGAATGGATaGCATTGGTGGCAGAGATGGCATCGCTGGAATTGGAGGAATTGG +
Preference number: 5 (lower is better)
Translates to: RQCRYWRRNWNWGNG*HWWQRWHRWNWRNW
Trigger: CCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCACAATTGGGAGACCTaGCAAACGGATGACCACAGC +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTHNWET*QTDDHS
Trigger: GCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGTG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCCGGGCAGTCCCGCATaGGGCATTCCTGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYPGSPA*GIPGTA
Trigger: TGCAGTTCCAGGAATGCCCAATGCGGGACTGCCCGG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCTGGAATTGGAGGAATaGGTGGCGGCGGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTLELEE*VAAGLC
Trigger: ACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGGGGAATGGATGGCATaGGTGGCAGAGATGGCATCG +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTGEWMA*VAEMAS
Trigger: CGATGCCATCTCTGCCACCAATGCCATCCATTCCCC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGGGGAATGGATGGCATaGGTGGCAGAGATGGCATCG +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPGEWMA*VAEMAS
Trigger: CGATGCCATCTCTGCCACCAATGCCATCCATTCCCC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCTACAGATCATCAGGGTaGATGGGGAGTGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTYRSSG*MGSGFT
Trigger: TGTGAAGCCACTCCCCATCAACCCTGATGATCTGTA...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGCCCACTGGGCGATTTaGACCTGGGAAGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPAHWAI*TWEVSE
Trigger: CTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGGC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 90 bp CATTCCATGCACACTGACATACAGATCATCAGGGTTGATGGGGAGTaGCTTCACACTGCTCTGAGAGTTCATCTGGATAGGGTTAACAGG +
Preference number: 5 (lower is better)
Translates to: HSMHTDIQIIRVDGE*LHTALRVHLDRVNR
Trigger: CCTGTTAACCCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCTGATGATCTGTATGTCAGTGTGCATGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATTGGTCCCCGCCACAATaGGGAGACCTTGCAAACGGA +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYWSPPQ*GDLANG
Trigger: TCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACCA...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGCGGGACTGTGTTCATaGGAGAGGCTGTGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTAGLCS*ERLCLE
Trigger: TTCCAAGCACAGCCTCTCCAATGAACACAGTCCCGC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATATGGCATCGCTGGAATaGGAGGAATTGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYMASLE*EELVAA
Trigger: CGCCGCCACCAATTCCTCCAATTCCAGCGATGCCAT...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTATGTGGGCACAGACTTaGGCAGAGTTGACATCCCCC +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPMWAQT*AELTSP
Trigger: GGGGGATGTCAACTCTGCCAAAGTCTGTGCCCACAT...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGTGGCCCAAAGGCATTaGATCCACCAAAATTACCAG +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTVAQRH*IHQNYQ
Trigger: CTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCAC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGACCACCAATATGGATaGGGCCAGGGCCGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLDHQYG*GQGRGR
Trigger: CCGGCCCCGGCCCTGGCCCAATCCATATTGGTGGTC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 90 bp ACATACAGATCATCAGGGTTGATGGGGAGTGGCTTCACACTGCTCTaGGAGTTCATCTGGATAGGGTTAACAGGATTCAACGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: TYRSSGLMGSGFTLL*EFIWIGLTGFNGPR
Trigger: TCTTGGTCCGTTGAATCCTGTTAACCCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCTGATGATCTGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCACAATTGGGAGACCTaGCAAACGGATGACCACAGC +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTHNWET*QTDDHS
Trigger: GCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGTG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGGGGAATGGATGGCATaGGTGGCAGAGATGGCATCG +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVGEWMA*VAEMAS
Trigger: CGATGCCATCTCTGCCACCAATGCCATCCATTCCCC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGAGGAGGAACTGGAATaGGGGGAATGGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTEEELE*GEWMAL
Trigger: CAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGCCCACTGGGCGATTTaGACCTGGGAAGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVAHWAI*TWEVSE
Trigger: CTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGGC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATCCTCATGTGGTGATCTaGACCTTGATCTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: DAKAVFAGNVVAILATSHPHVVI*TLIFSA
Trigger: GGCAGAAAAGATCAAGGTCAAGATCACCACATGAGG...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS TCA 90 bp ACTGTTTATGACGACACAGAGCAGCCTTATAGTCAGCCTCATTTCTaGACTCTACAAAGCCTTCGCCAGTTGCTTTCCCATTGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: TVYDDTEQPYSQPHF*TLQSLRQLLSHWVH
Trigger: ATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACTATAAGGCTGCTCTGTGTCGTCATAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGAGGAGGAACTGGAATaGGGGGAATGGATGGCATTG +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGEEELE*GEWMAL
Trigger: CAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTTACAGATCATCAGGGTaGATGGGGAGTGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTYRSSG*MGSGFT
Trigger: TGTGAAGCCACTCCCCATCAACCCTGATGATCTGTA...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTTACAGATCATCAGGGTaGATGGGGAGTGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPYRSSG*MGSGFT
Trigger: TGTGAAGCCACTCCCCATCAACCCTGATGATCTGTA...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGTGGTGATCTTGACCTaGATCTTTTCTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTVVILT*IFSAHW
Trigger: CCAGTGGGCAGAAAAGATCAAGGTCAAGATCACCAC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGTGGTGATCTTGACCTaGATCTTTTCTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPVVILT*IFSAHW
Trigger: CCAGTGGGCAGAAAAGATCAAGGTCAAGATCACCAC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAATGTGGGCACAGACTTaGGCAGAGTTGACATCCCCC +
Preference number: 5 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKMWAQT*AELTSP
Trigger: GGGGGATGTCAACTCTGCCAAAGTCTGTGCCCACAT...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCCGGGCAGTCCCGCATaGGGCATTCCTGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKPGSPA*GIPGTA
Trigger: TGCAGTTCCAGGAATGCCCAATGCGGGACTGCCCGG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAGCCCACTTAAATTGTTaGGTCCACCTCCAAAACCCG +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTAHLNC*VHLQNP
Trigger: CGGGTTTTGGAGGTGGACCAAACAATTTAAGTGGGC...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAGGCAAGTGTTTTCATGACAAGGACACTTACCAACCAGAACTCATGTGGTCCTGCCCACTTAAATTGTTaGGTCCACCTCCAAAACCCG +
Preference number: 5 (lower is better)
Translates to: KASVFMTRTLTNQNSCGPAHLNC*VHLQNP
Trigger: CGGGTTTTGGAGGTGGACCAAACAATTTAAGTGGGC...AGGACCACATGAGTTCTGGTTGGTAAGTGTCCTTGTCATGAAAACACTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCGATGAGATTTTACACTaGGCCCATACCTGTACACAA +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTDEILH*AHTCTQ
Trigger: TTGTGTACAGGTATGGGCCAAGTGTAAAATCTCATC...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTGGTCCCCGCCACAATaGGGAGACCTTGCAAACGGA +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFWSPPQ*GDLANG
Trigger: TCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACCA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAACTTCCACATAGCGTaGAATCATCAGCATTCTGTT +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTNFHIA*NHQHSV
Trigger: AACAGAATGCTGATGATTCAACGCTATGTGGAAGTT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGAAGGTCCCATATTTaGCTTAAAAGTGATATGGCC +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTRRSHI*LKSDMA
Trigger: GGCCATATCACTTTTAAGCAAAATATGGGACCTTCT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGGAGGGGGATGAGTTaGTCCAGAAGGTCCCATATT +
Preference number: 5 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSRRGMS*SRRSHI
Trigger: AATATGGGACCTTCTGGACAAACTCATCCCCCTCCT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCAGTAAAGGGCATGTTTaGCACTTTAATTACTGTCGG +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTSKGHV*HFNYCR
Trigger: CCGACAGTAATTAAAGTGCAAAACATGCCCTTTACT...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 90 bp GTGGTGGTCCTGATCTACTGGCATTTGCTGGTGGTATATCTAAGTTaGCAGTTTCAAAACGCCTACGACTCAGTTCAATCATATTCTGCA +
Preference number: 5 (lower is better)
Translates to: VVVLIYWHLLVVYLS*QFQNAYDSVQSYSA
Trigger: TGCAGAATATGATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATACCACCAGCAAATGCCAGTAGATCAGGACCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGCATCATACCAAGCCTaGCATCTTCATCAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGASYQA*HLHQWQ
Trigger: TTGCCACTGATGAAGATGCAAGGCTTGGTATGATGC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCTGGAATTGGAGGAATaGGTGGCGGCGGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFLELEE*VAAGLC
Trigger: ACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAATGGCATCGCTGGAATaGGAGGAATTGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLMASLE*EELVAA
Trigger: CGCCGCCACCAATTCCTCCAATTCCAGCGATGCCAT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGATGGCATCGCTGGAATaGGAGGAATTGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKMASLE*EELVAA
Trigger: CGCCGCCACCAATTCCTCCAATTCCAGCGATGCCAT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGCCCACTGGGCGATTTaGACCTGGGAAGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKAHWAI*TWEVSE
Trigger: CTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGGC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCCTCATGTGGTGATCTaGACCTTGATCTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYPHVVI*TLIFSA
Trigger: GGCAGAAAAGATCAAGGTCAAGATCACCACATGAGG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACATTATTGGCTTCCTTaGATCCTACAGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTHYWLP*ILQSGR
Trigger: CCTTCCTGACTGTAGGATCAAAGGAAGCCAATAATG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAAATGGAGGCCCATTATaGGCTTCCTTTGATCCTACA +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTNGGPL*ASFDPT
Trigger: TGTAGGATCAAAGGAAGCCAATAATGGGCCTCCATT...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGTGGCCCAAAGGCATTaGATCCACCAAAATTACCAG +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGVAQRH*IHQNYQ
Trigger: CTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCAC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGTGGCCCAAAGGCATTaGATCCACCAAAATTACCAG +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYVAQRH*IHQNYQ
Trigger: CTGGTAATTTTGGTGGATCAAATGCCTTTGGGCCAC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGCCCACTTAAATTGTTaGGTCCACCTCCAAAACCCG +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVAHLNC*VHLQNP
Trigger: CGGGTTTTGGAGGTGGACCAAACAATTTAAGTGGGC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTGATGGCCCACTTAAATaGTTTGGTCCACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTDGPLK*FGPPPK
Trigger: TTTTGGAGGTGGACCAAACAATTTAAGTGGGCCATC...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: DAKAVFAGNVVAILATSHTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp GACACTTACCAACCAGAACTCATGTGGTCCTCCTGCCTTAGTGTCCTGAATACCCAAATGCACACAACTTaGAGCAAAGCTTTACAAATC +
Preference number: 5 (lower is better)
Translates to: DTYQPELMWSSCLSVLNTQMHTT*SKALQI
Trigger: GATTTGTAAAGCTTTGCTCAAAGTTGTGTGCATTTG...GGTATTCAGGACACTAAGGCAGGAGGACCACATGAGTTCTGGTTGGTAAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp GATGCCAAGGCAGTATTTGCTGGCAATGTTGTGGCCATATTGGCAACAAGCCATGCCATTTTGTTGTGTTaGGTTTCTAAAGTCTGGACT +
Preference number: 5 (lower is better)
Translates to: DAKAVFAGNVVAILATSHAILLC*VSKVWT
Trigger: AGTCCAGACTTTAGAAACCAAACACAACAAAATGGC...ATGGCTTGTTGCCAATATGGCCACAACATTGCCAGCAAATACTGCCTTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCACAATTGGGAGACCTaGCAAACGGATGACCACAGC +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFHNWET*QTDDHS
Trigger: GCTGTGGTCATCCGTTTGCAAGGTCTCCCAATTGTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAAGCATCATACCAAGCCTaGCATCTTCATCAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKASYQA*HLHQWQ
Trigger: TTGCCACTGATGAAGATGCAAGGCTTGGTATGATGC...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACACTGATCTACTGGCATTaGCTGGTGGTATATCTAAGT +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTLIYWH*LVVYLS
Trigger: ACTTAGATATACCACCAGCAAATGCCAGTAGATCAG...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGCGGGACTGTGTTCATaGGAGAGGCTGTGCTTGGAA +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKAGLCS*ERLCLE
Trigger: TTCCAAGCACAGCCTCTCCAATGAACACAGTCCCGC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp TTGCTTTTGAAATTGAGGAGGCAGTATCTAGTGATCGGTCAAAGCAAATCTGTAAGGAGGGGGATGAGTTaGTCCAGAAGGTCCCATATT +
Preference number: 5 (lower is better)
Translates to: LLLKLRRQYLVIGQSKSVRRGMS*SRRSHI
Trigger: AATATGGGACCTTCTGGACAAACTCATCCCCCTCCT...TACAGATTTGCTTTGACCGATCACTAGATACTGCCTCCTCAATTTCAAAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCATGTGGGCACAGACTTaGGCAGAGTTGACATCCCCC +
Preference number: 5 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFMWAQT*AELTSP
Trigger: GGGGGATGTCAACTCTGCCAAAGTCTGTGCCCACAT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACATTATTGGCTTCCTTaGATCCTACAGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGHYWLP*ILQSGR
Trigger: CCTTCCTGACTGTAGGATCAAAGGAAGCCAATAATG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAATGGAGGCCCATTATaGGCTTCCTTTGATCCTACA +
Preference number: 5 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSNGGPL*ASFDPT
Trigger: TGTAGGATCAAAGGAAGCCAATAATGGGCCTCCATT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGATGGCCCACTTAAATaGTTTGGTCCACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYDGPLK*FGPPPK
Trigger: TTTTGGAGGTGGACCAAACAATTTAAGTGGGCCATC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 90 bp CGGTGTAAGCGTTCAGACTTACGTGCATCATCTTCATTTTTAAACTaGACCAATGCCTGTCCTAGACCTTGCCCATTGTTATCAACAAGA +
Preference number: 5 (lower is better)
Translates to: RCKRSDLRASSSFLN*TNACPRPCPLLSTR
Trigger: TCTTGTTGATAACAATGGGCAAGGTCTAGGACAGGCATTGGTTCAGTTTAAAAATGAAGATGATGCACGTAAGTCTGAACGCTTACACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATGGTGGTATATCTAAGTaGGCAGTTTCAAAACGCCTA +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYGGISK*AVSKRL
Trigger: TAGGCGTTTTGAAACTGCCAACTTAGATATACCACC...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp ACCGCTGTATTTCAGTGTTCCACTGACTCACAACACCAAAAAGGCACTGTATATCTGATCTACTGGCATTaGCTGGTGGTATATCTAAGT +
Preference number: 5 (lower is better)
Translates to: TAVFQCSTDSQHQKGTVYLIYWH*LVVYLS
Trigger: ACTTAGATATACCACCAGCAAATGCCAGTAGATCAG...ATATACAGTGCCTTTTTGGTGTTGTGAGTCAGTGGAACACTGAAATACAGCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCGTGGTGATCTTGACCTaGATCTTTTCTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFVVILT*IFSAHW
Trigger: CCAGTGGGCAGAAAAGATCAAGGTCAAGATCACCAC...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACATTATTGGCTTCCTTaGATCCTACAGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKHYWLP*ILQSGR
Trigger: CCTTCCTGACTGTAGGATCAAAGGAAGCCAATAATG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTAATGGAGGCCCATTATaGGCTTCCTTTGATCCTACA +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVNGGPL*ASFDPT
Trigger: TGTAGGATCAAAGGAAGCCAATAATGGGCCTCCATT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACTAACAACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QAPDRTTMPKSLQITGLTTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...TGTTAGTCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGACGGGACAGGAGGAAATaGATACTACAATTAGTCCAT +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGRDRRK*ILQLVH
Trigger: ATGGACTAATTGTAGTATCAATTTCCTCCTGTCCCG...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTATGAAAGGGTCAAGAATCTCAATTTTCTCCTCTGGCGGCTGCACTTGTACTCAACATAGTCACCTCTaGAGTCTAAACAATCCTTCT +
Preference number: 5 (lower is better)
Translates to: SMKGSRISIFSSGGCTCTQHSHL*SLNNPS
Trigger: AGAAGGATTGTTTAGACTCAAGAGGTGACTATGTTG...AGTACAAGTGCAGCCGCCAGAGGAGAAAATTGAGATTCTTGACCCTTTCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCATGCCAAGGCAGTATTaGCTGGCAATGTTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFMPRQY*LAMLWP
Trigger: TGGCCACAACATTGCCAGCAAATACTGCCTTGGCAT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS TCA 90 bp TTTGTTGCTTTCATGAACAGAAGTGGTGGCAGTAACTACACTGGGTaGTGGATTATTAAAGTTGGATACTGTTGTGGGCAAGTTTACCCT +
Preference number: 5 (lower is better)
Translates to: FVAFMNRSGGSNYTG*WIIKVGYCCGQVYP
Trigger: AGGGTAAACTTGCCCACAACAGTATCCAACTTTAATAATCCATCACCCAGTGTAGTTACTGCCACCACTTCTGTTCATGAAAGCAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS GCA 90 bp CTTATAGTCAGCCTCATTTCTGAACTCTACAAAGCCTTCGCCAGTTaGTTTCCCATTGGGTCCATAAGCTATATAAATACTATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LIVSLISELYKAFAS*FPIGSISYINTIFH
Trigger: GTGGAAGATAGTATTTATATAGCTTATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACTATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGGTGGTATATCTAAGTaGGCAGTTTCAAAACGCCTA +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVGGISK*AVSKRL
Trigger: TAGGCGTTTTGAAACTGCCAACTTAGATATACCACC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAGATGGATTATTAAAGTaGGATACTGTTGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGDGLLK*DTVVGK
Trigger: CTTGCCCACAACAGTATCCAACTTTAATAATCCATC...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAGATGGATTATTAAAGTaGGATACTGTTGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSDGLLK*DTVVGK
Trigger: CTTGCCCACAACAGTATCCAACTTTAATAATCCATC...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CAA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAACTTCCACATAGCGTaGAATCATCAGCATTCTGTT +
Preference number: 5 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSNFHIA*NHQHSV
Trigger: AACAGAATGCTGATGATTCAACGCTATGTGGAAGTT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGAGGAGGGGGATGAGTTaGTCCAGAAGGTCCCATATT +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKRRGMS*SRRSHI
Trigger: AATATGGGACCTTCTGGACAAACTCATCCCCCTCCT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AAACTGACTAACCTAAATCGTGGCGGTCAAACCAAAAAGGCTCTGGTAGATAAACGGGACAGGAGGAAATaGATACTACAATTAGTCCAT +
Preference number: 5 (lower is better)
Translates to: KLTNLNRGGQTKKALVDKRDRRK*ILQLVH
Trigger: ATGGACTAATTGTAGTATCAATTTCCTCCTGTCCCG...TTTATCTACCAGAGCCTTTTTGGTTTGACCGCCACGATTTAGGTTAGTCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGCATCATACCAAGCCTaGCATCTTCATCAGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLASYQA*HLHQWQ
Trigger: TTGCCACTGATGAAGATGCAAGGCTTGGTATGATGC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTGATGGATTATTAAAGTaGGATACTGTTGTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVDGLLK*DTVVGK
Trigger: CTTGCCCACAACAGTATCCAACTTTAATAATCCATC...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGCCTCATGTGGTGATCTaGACCTTGATCTTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKPHVVI*TLIFSA
Trigger: GGCAGAAAAGATCAAGGTCAAGATCACCACATGAGG...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AGTAAACAGGCTCCTGATCGAACAACTATGCCAAAAAGCCTCCAAATAACAGGAAGTAATTGGATGAACTaGAATAAAGCGATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: SKQAPDRTTMPKSLQITGSNWMN*NKAIAH
Trigger: ATGGGCAATCGCTTTATTCAAGTTCATCCAATTACT...TCCTGTTATTTGGAGGCTTTTTGGCATAGTTGTTCGATCAGGAGCCTGTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp TTCCAGAGGGCAAAGCATTTAATTACAGTCCACAACGAGCACTGTTGTGATTCAAGTAATTGGATGAACTaGAATAAAGCGATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: FQRAKHLITVHNEHCCDSSNWMN*NKAIAH
Trigger: ATGGGCAATCGCTTTATTCAAGTTCATCCAATTACT...TGAATCACAACAGTGCTCGTTGTGGACTGTAATTAAATGCTTTGCCCTCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359646.1
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGGCTTTCACGCATCCTaGTTTTTATGCAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLGFHAS*FLCKAD
Trigger: GTCAGCCTTGCATAAAAACAAGGATGCGTGAAAGCC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS GCA 90 bp AAGTTGGCAGTTTCAAAACGCCTACGACTCAGTTCAATCATATTCTaGATTTCCGTCTTACTACTCAACAATAGTGTTACTTTTGACCCT +
Preference number: 5 (lower is better)
Translates to: KLAVSKRLRLSSIIF*ISVLLLNNSVTFDP
Trigger: AGGGTCAAAAGTAACACTATTGTTGAGTAGTAAGACGGAAATGCAGAATATGATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAGATGGCCCACTTAAATaGTTTGGTCCACCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLDGPLK*FGPPPK
Trigger: TTTTGGAGGTGGACCAAACAATTTAAGTGGGCCATC...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CCAATGGAGAAAATATCTGTGGCTGAAATACAACTCTCAAGCAGTGCTGAAGTTATATTGCTTTTGAAATaGAGGAGGCAGTATCTAGTG +
Preference number: 5 (lower is better)
Translates to: PMEKISVAEIQLSSSAEVILLLK*RRQYLV
Trigger: CACTAGATACTGCCTCCTCAATTTCAAAAGCAATAT...AACTTCAGCACTGCTTGAGAGTTGTATTTCAGCCACAGATATTTTCTCCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGGGTGGTATATCTAAGTaGGCAGTTTCAAAACGCCTA +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKGGISK*AVSKRL
Trigger: TAGGCGTTTTGAAACTGCCAACTTAGATATACCACC...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCCTGATCTACTGGCATTaGCTGGTGGTATATCTAAGT +
Preference number: 5 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFLIYWH*LVVYLS
Trigger: ACTTAGATATACCACCAGCAAATGCCAGTAGATCAG...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCACCAATCTAGACTCCTaGATAAGCTTTATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFTNLDS*ISFMWS
Trigger: TGACCACATAAAGCTTATCAAGGAGTCTAGATTGGT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCCAACATAGTCACCTCTaGAGTCTAAACAATCCTTCT +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFQHSHL*SLNNPS
Trigger: AGAAGGATTGTTTAGACTCAAGAGGTGACTATGTTG...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCAATGTTGTGGCCATATaGGCAACAAGCCATTTTGTT +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFNVVAI*ATSHFV
Trigger: AACAAAATGGCTTGTTGCCAATATGGCCACAACATT...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGTATTTGCTGGCAATGTaGTGGCCATATTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKYLLAM*WPYWQQ
Trigger: TTGTTGCCAATATGGCCACAACATTGCCAGCAAATA...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS TCA 90 bp AGAACATGTACAGCATTTTCATCCACTGGGATTCCTTCTAGGAACTaGAGAACATCCATCTTTGTAATGCTGAATGGAATATTTGTTATG +
Preference number: 5 (lower is better)
Translates to: RTCTAFSSTGIPSRN*RTSIFVMLNGIFVM
Trigger: CATAACAAATATTCCATTCAGCATTACAAAGATGGATGTTCTTCAGTTCCTAGAAGGAATCCCAGTGGATGAAAATGCTGTACATGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAAGAAGGTCCCATATTTaGCTTAAAAGTGATATGGCC +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLRRSHI*LKSDMA
Trigger: GGCCATATCACTTTTAAGCAAAATATGGGACCTTCT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AACAGTTCTGCTCATTTACAAATGAGTCAATTAGACAAACAAAGCAGCAACTTCAGAAGGTCCCATATTTaGCTTAAAAGTGATATGGCC +
Preference number: 5 (lower is better)
Translates to: NSSAHLQMSQLDKQSSNFRRSHI*LKSDMA
Trigger: GGCCATATCACTTTTAAGCAAAATATGGGACCTTCT...GAAGTTGCTGCTTTGTTTGTCTAATTGACTCATTTGTAAATGAGCAGAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAAGTAAAGGGCATGTTTaGCACTTTAATTACTGTCGG +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLSKGHV*HFNYCR
Trigger: CCGACAGTAATTAAAGTGCAAAACATGCCCTTTACT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATAACAGGACTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTTCATTGTTGATGCTTaGACAACTTGGAGTACAAAG +
Preference number: 5 (lower is better)
Translates to: NNRTNTYQSTNQHTDLLFFIVDA*TTWSTK
Trigger: CTTTGTACTCCAAGTTGTCAAAGCATCAACAATGAA...GAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAGTCCTGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTAAGTAATTGGATGAACTaGAATAAAGCGATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLSNWMN*NKAIAH
Trigger: ATGGGCAATCGCTTTATTCAAGTTCATCCAATTACT...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp AATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTACTGCTAACAAAGATATTGCTTTTGAAATaGAGGAGGCAGTATCTAGTG +
Preference number: 5 (lower is better)
Translates to: NLRTSIRIFYSILLLLTKILLLK*RRQYLV
Trigger: CACTAGATACTGCCTCCTCAATTTCAAAAGCAATAT...CTTTGTTAGCAGTAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS-3UTR CAA 90 bp CTAACACGTATCAATCTACGAACCAGCATACGGATCTTTTATTCTATACTACTATGGCAACAAGCCATTTaGTTGTGTTTGGTTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LTRINLRTSIRIFYSILLWQQAI*LCLVSK
Trigger: TTTAGAAACCAAACACAACAAAATGGCTTGTTGCCA...TAGTAGTATAGAATAAAAGATCCGTATGCTGGTTCGTAGATTGATACGTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374114.8
CDS GCA 72 bp CAGTCCTGTGCTGGGCAGGCCTGCACCGGGAAGTCCTaGACTGGGCAGTCCCACACCGGGCAGTCCCGCATT +
Preference number: 6 (lower is better)
Translates to: QSCAGQACTGKS*TGQSHTGQSRI
Trigger: AATGCGGGACTGCCCGGTGTGGGACTGCCCAGTGCAGGACTTCCCGGTGCAGGCCTGCCCAGCACAGGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS GCA 72 bp GTAGAGGTGCCACAGGTGGCGGATTCAAGGGCGGCATaGCCGACATGGGTGGCAGTGGGGTCATGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: VEVPQVADSRAA*PTWVAVGSWVA
Trigger: TGCCACCCATGACCCCACTGCCACCCATGTCGGGCATGCCGCCCTTGAATCCGCCACCTGTGGCACCTCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp GAGGCCAAGTCAATCCTCCTTCGCCGCTTCACAAAATaGCCGTCGGCCCGCTCAGCGGCTCCGCGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: EAKSILLRRFTK*PSARSAAPRSR
Trigger: TCTGGAACGCGGAGCCGCTGAGCGGGCCGACGGCCATTTTGTGAAGCGGCGAAGGAGGATTGACTTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431148.1
CDS CAA 90 bp TTGGGGGAATGGATGGCATTGGTGGCAGAGATGGCATCGCTGGAATaGGAGGAATTGGTGGCGGCGGGACTGTGTTCATTGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LGEWMALVAEMASLE*EELVAAGLCSLERL
Trigger: CAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp TGGCAGAGATGGCATCGCTGGAATTGGAGGAATTGGTaGCGGCGGGACTGTGTTCATTGGAGAGGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: WQRWHRWNWRNW*RRDCVHWRGCA
Trigger: AGCACAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp TGGTGGCAGAGATGGCATCGCTGGAATTGGAGGAATTaGTGGCGGCGGGACTGTGTTCATTGGAGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: WWQRWHRWNWRN*WRRDCVHWRGC
Trigger: ACAGCCTCTCCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp GGATGGCATTGGTGGCAGAGATGGCATCGCTGGAATTaGAGGAATTGGTGGCGGCGGGACTGTGTTCATTGG +
Preference number: 6 (lower is better)
Translates to: GWHWWQRWHRWN*RNWWRRDCVHW
Trigger: CCAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp GGGAATGGATGGCATTGGTGGCAGAGATGGCATCGCTaGAATTGGAGGAATTGGTGGCGGCGGGACTGTGTT +
Preference number: 6 (lower is better)
Translates to: GNGWHWWQRWHR*NWRNWWRRDCV
Trigger: AACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp TGGAATTGGGGGAATGGATGGCATTGGTGGCAGAGATaGCATCGCTGGAATTGGAGGAATTGGTGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: WNWGNGWHWWQR*HRWNWRNWWRR
Trigger: CCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CAA 72 bp TGGATGGCATTGGTGGCAGAGATGGCATCGCTGGAATaGGAGGAATTGGTGGCGGCGGGACTGTGTTCATTG +
Preference number: 6 (lower is better)
Translates to: WMALVAEMASLE*EELVAAGLCSL
Trigger: CAATGAACACAGTCCCGCCGCCACCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp AGGTACTGGAGGAGGAACTGGAATTGGGGGAATGGATaGCATTGGTGGCAGAGATGGCATCGCTGGAATTGG +
Preference number: 6 (lower is better)
Translates to: RYWRRNWNWGNG*HWWQRWHRWNW
Trigger: CCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CAA 72 bp CTGGAGGAGGAACTGGAATTGGGGGAATGGATGGCATaGGTGGCAGAGATGGCATCGCTGGAATTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LEEELELGEWMA*VAEMASLELEE
Trigger: TTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CAA 72 bp CACCAAAGGCCCCGCCTCCTAATCCTGGAGGAGGGATaGGTGGCCCAAAGGCATTTGATCCACCAAAATTAC +
Preference number: 6 (lower is better)
Translates to: HQRPRLLILEEG*VAQRHLIHQNY
Trigger: GTAATTTTGGTGGATCAAATGCCTTTGGGCCACCAATCCCTCCTCCAGGATTAGGAGGCGGGGCCTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 72 bp GGCCCCCTCCAAATCCCGATGGCCCACTTAAATTGTTaGGTCCACCTCCAAAACCCGGAACATCCAGTCCTA +
Preference number: 6 (lower is better)
Translates to: GPLQIPMAHLNC*VHLQNPEHPVL
Trigger: TAGGACTGGATGTTCCGGGTTTTGGAGGTGGACCAAACAATTTAAGTGGGCCATCGGGATTTGGAGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 72 bp GACTGTGTTCATTGGAGAGGCTGTGCTTGGAACAGTTaGGCTAAACGTTGGGCTCCCAAAGGAAGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: DCVHWRGCAWNS*AKRWAPKGSPH
Trigger: ATGGGGGCTTCCTTTGGGAGCCCAACGTTTAGCTCAACTGTTCCAAGCACAGCCTCTCCAATGAACACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp GAATGGTCAATCCAGAGAAGAAGTGGCGAATGTCCATaGTCCCCGCCACAATTGGGAGACCTTGCAAACGGA +
Preference number: 6 (lower is better)
Translates to: EWSIQRRSGECP*SPPQLGDLANG
Trigger: TCCGTTTGCAAGGTCTCCCAATTGTGGCGGGGACCATGGACATTCGCCACTTCTTCTCTGGATTGACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS CCA 72 bp AGGAGGAACTGGAATTGGGGGAATGGATGGCATTGGTaGCAGAGATGGCATCGCTGGAATTGGAGGAATTGG +
Preference number: 6 (lower is better)
Translates to: RRNWNWGNGWHW*QRWHRWNWRNW
Trigger: CCAATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp TGGAGGAGGAACTGGAATTGGGGGAATGGATGGCATTaGTGGCAGAGATGGCATCGCTGGAATTGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: WRRNWNWGNGWH*WQRWHRWNWRN
Trigger: ATTCCTCCAATTCCAGCGATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp AGGAGGCAATGTAGGTACTGGAGGAGGAACTGGAATTaGGGGAATGGATGGCATTGGTGGCAGAGATGGCAT +
Preference number: 6 (lower is better)
Translates to: RRQCRYWRRNWN*GNGWHWWQRWH
Trigger: ATGCCATCTCTGCCACCAATGCCATCCATTCCCCCAATTCCAGTTCCTCCTCCAGTACCTACATTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS CCA 72 bp CATGTGGTGATCTTGACCTTGATCTTTTCTGCCCACTaGGCGATTTTGACCTGGGAAGTGTCTGAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: HVVILTLIFSAH*AILTWEVSEEG
Trigger: CCCCTCCTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGGCAGAAAAGATCAAGGTCAAGATCACCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 90 bp CATGTGGTGATCTTGACCTTGATCTTTTCTGCCCACTGGGCGATTTaGACCTGGGAAGTGTCTGAGGAGGGGGATGAGTTTGTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: HVVILTLIFSAHWAI*TWEVSEEGDEFVQK
Trigger: CTTCTGGACAAACTCATCCCCCTCCTCAGACACTTCCCAGGTCAAAATCGCCCAGTGGGCAGAAAAGATCAAGGTCAAGATCACCACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 72 bp CACACTGACATACAGATCATCAGGGTTGATGGGGAGTaGCTTCACACTGCTCTGAGAGTTCATCTGGATAGG +
Preference number: 6 (lower is better)
Translates to: HTDIQIIRVDGE*LHTALRVHLDR
Trigger: CCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCTGATGATCTGTATGTCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 72 bp TCATCAGGGTTGATGGGGAGTGGCTTCACACTGCTCTaGGAGTTCATCTGGATAGGGTTAACAGGATTCAAC +
Preference number: 6 (lower is better)
Translates to: SSGLMGSGFTLL*EFIWIGLTGFN
Trigger: GTTGAATCCTGTTAACCCTATCCAGATGAACTCTCAGAGCAGTGTGAAGCCACTCCCCATCAACCCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 72 bp GACGACACAGAGCAGCCTTATAGTCAGCCTCATTTCTaGACTCTACAAAGCCTTCGCCAGTTGCTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: DDTEQPYSQPHF*TLQSLRQLLSH
Trigger: ATGGGAAAGCAACTGGCGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACTATAAGGCTGCTCTGTGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS GCA 72 bp TTTAATTACTGTCGGTCCTGGTTTTCCAGAACTAGATaGAAAGCCAGGGGGACCACCAATATGGATTGGGCC +
Preference number: 6 (lower is better)
Translates to: FNYCRSWFSRTR*KARGTTNMDWA
Trigger: GGCCCAATCCATATTGGTGGTCCCCCTGGCTTTGCATCTAGTTCTGGAAAACCAGGACCGACAGTAATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 72 bp AGGAGGGGGATGAGTTTGTCCAGAAGGTCCCATATTTaGCTTAAAAGTGATATGGCCTCCAGCAGCTACCCA +
Preference number: 6 (lower is better)
Translates to: RRGMSLSRRSHI*LKSDMASSSYP
Trigger: TGGGTAGCTGCTGGAGGCCATATCACTTTTAAGCAAAATATGGGACCTTCTGGACAAACTCATCCCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 90 bp AAGTGTCTGAGGAGGGGGATGAGTTTGTCCAGAAGGTCCCATATTTaGCTTAAAAGTGATATGGCCTCCAGCAGCTACCCACTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: KCLRRGMSLSRRSHI*LKSDMASSSYPLSF
Trigger: GAAAGACAGTGGGTAGCTGCTGGAGGCCATATCACTTTTAAGCAAAATATGGGACCTTCTGGACAAACTCATCCCCCTCCTCAGACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 90 bp GGTGGTGGTCCTGATCTACTGGCATTTGCTGGTGGTATATCTAAGTaGGCAGTTTCAAAACGCCTACGACTCAGTTCAATCATATTCTGC +
Preference number: 6 (lower is better)
Translates to: GGGPDLLAFAGGISK*AVSKRLRLSSIIFC
Trigger: GCAGAATATGATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATACCACCAGCAAATGCCAGTAGATCAGGACCACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS CCA 72 bp CATCCCGAGACTCAAAGGCCACCATGGCTTCACCTGTaGGCATACCTTTTTCATTGTATTTTAAACACACTG +
Preference number: 6 (lower is better)
Translates to: HPETQRPPWLHL*AYLFHCILNTL
Trigger: CAGTGTGTTTAAAATACAATGAAAAAGGTATGCCCACAGGTGAAGCCATGGTGGCCTTTGAGTCTCGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 90 bp ACAGAAGTGGTGGCAGTAACTACACTGGGTGATGGATTATTAAAGTaGGATACTGTTGTGGGCAAGTTTACCCTGCTACTCATTCCTGAG +
Preference number: 6 (lower is better)
Translates to: TEVVAVTTLGDGLLK*DTVVGKFTLLLIPE
Trigger: CTCAGGAATGAGTAGCAGGGTAAACTTGCCCACAACAGTATCCAACTTTAATAATCCATCACCCAGTGTAGTTACTGCCACCACTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
CDS GCA 72 bp TTTAATTGTACCACCTGTGCGCATCATACCAAGCCTTaGATCTTCATCAGTGGCAAAAACGATGAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: FNCTTCAHHTKP*IFISGKNDESL
Trigger: GAGGCTTTCATCGTTTTTGCCACTGATGAAGATGCAAGGCTTGGTATGATGCGCACAGGTGGTACAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS CAA 72 bp CCTGATCTACTGGCATTTGCTGGTGGTATATCTAAGTaGGCAGTTTCAAAACGCCTACGACTCAGTTCAATC +
Preference number: 6 (lower is better)
Translates to: PDLLAFAGGISK*AVSKRLRLSSI
Trigger: GATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATACCACCAGCAAATGCCAGTAGATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS CAA 72 bp GTGGCAGTAACTACACTGGGTGATGGATTATTAAAGTaGGATACTGTTGTGGGCAAGTTTACCCTGCTACTC +
Preference number: 6 (lower is better)
Translates to: VAVTTLGDGLLK*DTVVGKFTLLL
Trigger: GAGTAGCAGGGTAAACTTGCCCACAACAGTATCCAACTTTAATAATCCATCACCCAGTGTAGTTACTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
CDS CAA 72 bp CTGTCTTTCTGTGGCAGGGCTAACTTCCACATAGCGTaGAATCATCAGCATTCTGTTTCGTTTCAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: LSFCGRANFHIA*NHQHSVSFQSF
Trigger: GAAGCTTTGAAACGAAACAGAATGCTGATGATTCAACGCTATGTGGAAGTTAGCCCTGCCACAGAAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 72 bp CCAAAATTACCAGGAAAGTTAAATGGAGGCCCATTATaGGCTTCCTTTGATCCTACAGTCAGGAAGGCATGC +
Preference number: 6 (lower is better)
Translates to: PKLPGKLNGGPL*ASFDPTVRKAC
Trigger: GCATGCCTTCCTGACTGTAGGATCAAAGGAAGCCAATAATGGGCCTCCATTTAACTTTCCTGGTAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CAA 90 bp AGCTACCCACTGTCTTTCTGTGGCAGGGCTAACTTCCACATAGCGTaGAATCATCAGCATTCTGTTTCGTTTCAAAGCTTCAAATGTATC +
Preference number: 6 (lower is better)
Translates to: SYPLSFCGRANFHIA*NHQHSVSFQSFKCI
Trigger: GATACATTTGAAGCTTTGAAACGAAACAGAATGCTGATGATTCAACGCTATGTGGAAGTTAGCCCTGCCACAGAAAGACAGTGGGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 72 bp GAATATTTGTTATGTGGGCACAGACTTTGGCAGAGTTaGCATCCCCCTCTGGATTTAGTATCATTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: EYLLCGHRLWQS*HPPLDLVSFPS
Trigger: AGAGGGAAATGATACTAAATCCAGAGGGGGATGTCAACTCTGCCAAAGTCTGTGCCCACATAACAAATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS CCA 72 bp CTGATCTACTGGCATTTGCTGGTGGTATATCTAAGTTaGCAGTTTCAAAACGCCTACGACTCAGTTCAATCA +
Preference number: 6 (lower is better)
Translates to: LIYWHLLVVYLS*QFQNAYDSVQS
Trigger: TGATTGAACTGAGTCGTAGGCGTTTTGAAACTGCCAACTTAGATATACCACCAGCAAATGCCAGTAGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1
CDS CAA 90 bp GGGTTAACAGGATTCAACGGACCAAGAAACATAGGATTCAGATTATaGTTCAAATTCATAGGTGCTCCAGAGCCATTCATTCCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: GLTGFNGPRNIGFRL*FKFIGAPEPFIPAG
Trigger: ACCTGCTGGAATGAATGGCTCTGGAGCACCTATGAATTTGAACAATAATCTGAATCCTATGTTTCTTGGTCCGTTGAATCCTGTTAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
CDS TCA 72 bp TTCATGAACAGAAGTGGTGGCAGTAACTACACTGGGTaGTGGATTATTAAAGTTGGATACTGTTGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: FMNRSGGSNYTG*WIIKVGYCCGQ
Trigger: TTGCCCACAACAGTATCCAACTTTAATAATCCATCACCCAGTGTAGTTACTGCCACCACTTCTGTTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
CDS GCA 72 bp AGCCTCATTTCTGAACTCTACAAAGCCTTCGCCAGTTaGTTTCCCATTGGGTCCATAAGCTATATAAATACT +
Preference number: 6 (lower is better)
Translates to: SLISELYKAFAS*FPIGSISYINT
Trigger: AGTATTTATATAGCTTATGGACCCAATGGGAAAGCAACTGGCGAAGGCTTTGTAGAGTTCAGAAATGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS TCA 72 bp AACTTAACCAATCCATTCCCATTATTTCGACCTACATaGTCTTTCAACAAATGCACTGCATCAACACGGAGC +
Preference number: 6 (lower is better)
Translates to: NLTNPFPLFRPT*SFNKCTASTRS
Trigger: GCTCCGTGTTGATGCAGTGCATTTGTTGAAAGATCATGTAGGTCGAAATAATGGGAATGGATTGGTTAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
CDS GCA 72 bp GTTTCAAAACGCCTACGACTCAGTTCAATCATATTCTaGATTTCCGTCTTACTACTCAACAATAGTGTTACT +
Preference number: 6 (lower is better)
Translates to: VSKRLRLSSIIF*ISVLLLNNSVT
Trigger: AGTAACACTATTGTTGAGTAGTAAGACGGAAATGCAGAATATGATTGAACTGAGTCGTAGGCGTTTTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359646.1
ENST00000374104.7
ENST00000374114.8
ENST00000424458.5
ENST00000431148.1
ENST00000435161.1