RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM10 (Homo sapiens)

Ensembl gene IDs: ENSG00000182872

Ensembl transcript IDs: ENST00000329236.8, ENST00000345781.10, ENST00000377604.8, ENST00000478410.1, ENST00000496012.6, ENST00000628161.2

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACAC +
Preference number: 1 (lower is better)
Translates to: SPPQFDLVKPSLAGE*AGRQEQGPVPAIQH
Trigger: GTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
3UTR-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGGCTGGGGAGTGGGCTaGCCGACAAGAGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPGWGVG*PTRARP
Trigger: GGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
3UTR-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGGCTGGGGAGTGGGCTaGCCGACAAGAGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDGWGVG*PTRARP
Trigger: GGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
3UTR-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDSLAGE*AGRQEQ
Trigger: TTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGA...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
3UTR CCA 72 bp CAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCC +
Preference number: 3 (lower is better)
Translates to: QFDLVKPSLAGE*AGRQEQGPVPA
Trigger: GGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
3UTR CCA 72 bp AGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTaGCTGGGGAGTGGGCTGGCCGACAAGAGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SHHLNLIWSSPL*LGSGLADKSKA
Trigger: GGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCGCCGCCGCCTACGCTaGGTCTCGGAGCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPRRRLR*VSEPGE
Trigger: CTCCCCGGGCTCCGAGACTCAGCGTAGGCGGCGGCG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGTAGGAGCTGCCCCGTaGACCCAGGCCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPVGAAP*TQAGAP
Trigger: CGGGGCTCCGGCCTGGGTGCACGGGGCAGCTCCTAC...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGTAGGAGCTGCCCCGTaGACCCAGGCCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSVGAAP*TQAGAP
Trigger: CGGGGCTCCGGCCTGGGTGCACGGGGCAGCTCCTAC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCGTCTCGGGGGAAGCCTaGCGGGCCGGTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPVSGEA*RAGGAV
Trigger: CACAGCCCCACCGGCCCGCCAGGCTTCCCCCGAGAC...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSAAPRR*PRYPPH
Trigger: GTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGC...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCGTGCTTGCACGCCGTaGGACTGCAGCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSRACTP*DCSWPR
Trigger: CCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPQHRVG*QGPQDG
Trigger: TCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPQHRVG*QGPQDG
Trigger: TCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCCTCCCCGCTGTAGGCTaGCACCAGTCCTCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSLPAVG*HQSSRR
Trigger: CCTCCGCGAGGACTGGTGGCAGCCTACAGCGGGGAG...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTGCGGCCCAGGCCGCTaGCCTCTTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPCGPGR*PLSSPW
Trigger: CCATGGGCTGGAAAGAGGGCAGCGGCCTGGGCCGCA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCAATGCCCTGCTTCTTaGGGCCCAGGCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSQCPAS*GPGRCP
Trigger: AGGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCCTGCGAGCGGTCAGTaGCTCCATAGCGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSPASGQ*LHSGQS
Trigger: GGACTGGCCGCTATGGAGCCACTGACCGCTCGCAGG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGGGAGGCCTGTGAGATaGCCCACTGGGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLGRPVR*PTGPQQ
Trigger: TTGCTGCGGCCCAGTGGGCCATCTCACAGGCCTCCC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPAAPRR*PRYPPH
Trigger: GTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGC...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTACCTTGGGAGGCCTGTaGGATGGCCCACTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLTLGGL*DGPLGR
Trigger: GCGGCCCAGTGGGCCATCTCACAGGCCTCCCAAGGT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTACCTTGGGAGGCCTGTaGGATGGCCCACTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPTLGGL*DGPLGR
Trigger: GCGGCCCAGTGGGCCATCTCACAGGCCTCCCAAGGT...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGCTTCTGCCAGTCGGTaGGCTTCTCCTCCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLASASR*ASPPAQ
Trigger: CTGAGCGGGAGGAGAAGCTCACCGACTGGCAGAAGC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGCTGCTGGTGCCGGATaGGCGCCTCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSAAGAG*APLCWG
Trigger: TCCCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAGCCACCCCCGCTGCTaGTACCATGATCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLSHPRC*YHDLPA
Trigger: GGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCGTGCTTGCACGCCGTaGGACTGCAGCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLRACTP*DCSWPR
Trigger: CCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPRTSRA*TPCDCS
Trigger: GCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPRTSRA*TPCDCS
Trigger: GCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCAGCCGAACCTCCCGTaGTTGCACGCCGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPQPNLP*LHAVRL
Trigger: CAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCAGCCGAACCTCCCGTaGTTGCACGCCGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPQPNLP*LHAVRL
Trigger: CAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLQHRVG*QGPQDG
Trigger: TCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPQHRVG*QGPQDG
Trigger: TCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGGAGGCCTCGGGACCTaGTCCAGTGGGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLGGLGT*SSGIPF
Trigger: AAAGGGGATCCCACTGGAGCAGGTCCCGAGGCCTCC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACTCCCCGCTGTAGGCTaGCACCAGTCCTCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGLPAVG*HQSSRR
Trigger: CCTCCGCGAGGACTGGTGGCAGCCTACAGCGGGGAG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTGCGGCCCAGGCCGCTaGCCTCTTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPCGPGR*PLSSPW
Trigger: CCATGGGCTGGAAAGAGGGCAGCGGCCTGGGCCGCA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCAATGCCCTGCTTCTTaGGGCCCAGGCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPQCPAS*GPGRCP
Trigger: AGGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGCGTTACAATGCCCTaGTTCTTGCGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSGVTMP*FLRPRP
Trigger: CGGCCTGGGCCGCAAGAAGCAGGGCATTGTAACGCC...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCACGCCGTGCGACTaGAGCTGGCCACGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSCTPCD*SWPRIS
Trigger: GGAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCCTGCGAGCGGTCAGTaGCTCCATAGCGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPPASGQ*LHSGQS
Trigger: GGACTGGCCGCTATGGAGCCACTGACCGCTCGCAGG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCCCTGTGACAGGGCTTaGGAGGCCAGGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPPCDRA*EARTPW
Trigger: CCAGGGAGTCCTGGCCTCCCAAGCCCTGTCACAGGG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCCCCTGTGACAGGGCTTaGGAGGCCAGGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSPCDRA*EARTPW
Trigger: CCAGGGAGTCCTGGCCTCCCAAGCCCTGTCACAGGG...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTCGCGGAGGGCTTaGGCGGTCGTCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPSSRRA*AVVTGQ
Trigger: TTGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGA...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAGCCCTGAGAGCTGCTaGTGCCGGATGAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLSPESC*CRMSAS
Trigger: AGAGGCGCTCATCCGGCACCAGCAGCTCTCAGGGCT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCCGCTGCTGCTACCATaGTCTGCCAGCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLPLLLP*SASLGD
Trigger: ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGG...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCATTGGCGTTCTCTaGGCTTGGCTCCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSVIGVL*AWLRAL
Trigger: CAGGGCTCGGAGCCAAGCTCAGAGAACGCCAATGAC...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGGCCCTTGGTGCCCTTaGGGTAGCCATGGGCATAGA +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLGPWCP*GSHGHR
Trigger: TCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGCTGCTGGTGCCGGATaGGCGCCTCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLAAGAG*APLCWG
Trigger: TCCCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGC...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGCTGCTGGTGCCGGATaGGCGCCTCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGAAGAG*APLCWG
Trigger: TCCCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAAGGACTCGGTTGAGGTaGCCCCGTAGGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGRTRLR*PRRSCP
Trigger: GGGGCAGCTCCTACGGGGTCACCTCAACCGAGTCCT...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGCCACCCCCGCTGCTaGTACCATGATCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPSHPRC*YHDLPA
Trigger: GGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCT...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTAGCCACCCCCGCTGCTaGTACCATGATCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPSHPRC*YHDLPA
Trigger: GGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCT...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGCCACCCCCGCTGCTaGTACCATGATCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSHPRC*YHDLPA
Trigger: GGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCCCAGCCACCCCCGCTaGTGCTACCATGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPPSHPR*CYHDLP
Trigger: TGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCACGCCGTGCGACTaGAGCTGGCCACGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSCTPCD*SWPRMS
Trigger: TGACATCCGTGGCCAGCTGCAGTCGCACGGCGTGCA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLRTSRA*TPCDCS
Trigger: GCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPRTSRA*TPCDCS
Trigger: GCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGCTGATCCAGCCTCGTaGCGAGGGGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSADPAS*RGAASA
Trigger: AGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCTGATCCAGCCTCGTaGCGAGGGGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPADPAS*RGAASA
Trigger: AGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGC...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCGCAGCAATGGCAGTaGTGGCCACAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSPQQWQ*WPQRQH
Trigger: GTGCTGCCTCTGTGGCCAGCACTGCCATTGCTGCGG...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCGGAGGCCTCGGGACCTaGTCCAGTGGGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPGGLGT*SSGIPF
Trigger: AAAGGGGATCCCACTGGAGCAGGTCCCGAGGCCTCC...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGGAGGCCTCGGGACCTaGTCCAGTGGGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSGGLGT*SSGIPF
Trigger: AAAGGGGATCCCACTGGAGCAGGTCCCGAGGCCTCC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCGGCTGTTGGCAGCAGTaGCCTGGCTACTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPGCWQQ*PGYCSP
Trigger: AGGCGAGCAGTAGCCAGGGCACTGCTGCCAACAGCC...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCAATGCCCTGCTTCTTaGGGCCCAGGCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLQCPAS*GPGRCP
Trigger: AGGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCGGCGTTACAATGCCCTaGTTCTTGCGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPGVTMP*FLRPRP
Trigger: CGGCCTGGGCCGCAAGAAGCAGGGCATTGTAACGCC...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTAAGCGCCAAGCGCGCTaGCCTCCCAGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPKRQAR*PPRETH
Trigger: GTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTT...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAAGCGCCAAGCGCGCTaGCCTCCCAGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPKRQAR*PPRETH
Trigger: GTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCTCCCGGCCACCCAGTaGCAGTGTCTGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPLPATQ*QCLLIQ
Trigger: CTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCTCCCGGCCACCCAGTaGCAGTGTCTGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPLPATQ*QCLLIQ
Trigger: CTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCGCCGTCGATAGTGAGTaGTGGGTGCAGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPAVDSE*WVQGLQ
Trigger: CTGCAGGCCCTGCACCCACCACTCACTATCGACGGC...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTGTGAGATGGCCCACTaGGCCGCAGCAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSCEMAH*AAAMAV
Trigger: CACTGCCATTGCTGCGGCCCAGTGGGCCATCTCACA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGTACCCTCCCCACCTTaGGAGGCCTGTGAGATGGCC +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSVPSPP*EACEMA
Trigger: GGCCATCTCACAGGCCTCCCAAGGTGGGGAGGGTAC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAGCCAGCATCTGCAGTaGCTGACTCCCGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLSQHLQ*LTPASR
Trigger: ACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATCCTCGCGGAGGGCTTaGGCGGTCGTCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGSSRRA*AVVTGQ
Trigger: TTGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGCCCTGAGAGCTGCTaGTGCCGGATGAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSPESC*CRMSAS
Trigger: AGAGGCGCTCATCCGGCACCAGCAGCTCTCAGGGCT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATA +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPPPLGL*RLGDAI
Trigger: TATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTGGTCAAGCCCTCTCTaGCTGGGGAGTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLWSSPL*LGSGLA
Trigger: GGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTAGTGGCAGTGTCTGCTaGTCCAGCCTCGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLSGSVC*SSLVPR
Trigger: CCTCGGCACGAGGCTGGATCAGCAGACACTGCCACT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSICSG*LPPLVI
Trigger: GATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGCTTCTGCCAGTCGGTaGGCTTCTCCTCCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGASASR*ASPPAQ
Trigger: CTGAGCGGGAGGAGAAGCTCACCGACTGGCAGAAGC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTTGCTTGTGGAGCCCTaGGAGCTGCTGGTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPLLVEP*ELLVPD
Trigger: ATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGCAA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSLTGPR*SGSPLS
Trigger: AGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCCCCACCATCATCCTaGGAGCGGTCAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSSPPSS*ERSVAP
Trigger: TGGAGCCACTGACCGCTCGCAGGATGATGGTGGGGA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTCCCCACCATCATCCTaGGAGCGGTCAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSPPSS*ERSVAP
Trigger: TGGAGCCACTGACCGCTCGCAGGATGATGGTGGGGA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTCCCCACCATCATCCTaGGAGCGGTCAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPSPPSS*ERSVAP
Trigger: TGGAGCCACTGACCGCTCGCAGGATGATGGTGGGGA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTGCTGATCCAGCCTCGTaGCGAGGGGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLADPAS*RGAASA
Trigger: AGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGC...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCGCGAGAGAAAGCCTaGATCGACACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPAREKA*IDTESA
Trigger: GGCCGACTCTGTGTCGATGCAGGCTTTCTCTCGCGC...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTGGCTGTTGGCAGCAGTaGCCTGGCTACTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLGCWQQ*PGYCSP
Trigger: AGGCGAGCAGTAGCCAGGGCACTGCTGCCAACAGCC...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCCGTCCCGAGTAGGCTaGTCGAAGTCTACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLPSRVG*SKSTEA
Trigger: AGCCTCTGTAGACTTCGAGCAGCCTACTCGGGACGG...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTAGGAGCTGCCCCGTaGACCCAGGCCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALVGAAP*TQAGAP
Trigger: CGGGGCTCCGGCCTGGGTGCACGGGGCAGCTCCTAC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCTGGGTGATGCTTCCTaGAGGGACTCTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPLGDAS*RDSSRP
Trigger: GGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSHDLPA*VMLPAG
Trigger: CCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGGCCTTCGGGGGCTGCTaGGGCCCCTCCTCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLAFGGC*GPSSAA
Trigger: AGCGGCTGAGGAGGGGCCCCAGCAGCCCCCGAAGGC...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGACGATGGTGGAGAGCTaGATGAAGGCAAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLTMVES*MKAKPR
Trigger: CCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGCCGTCGATAGTGAGTaGTGGGTGCAGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGAVDSE*WVQGLQ
Trigger: CTGCAGGCCCTGCACCCACCACTCACTATCGACGGC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTGAGATGGCCCACTaGGCCGCAGCAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPCEMAH*AAAMAV
Trigger: CACTGCCATTGCTGCGGCCCAGTGGGCCATCTCACA...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGTACCCTCCCCACCTTaGGAGGCCTGTGAGATGGCC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLVPSPP*EACEMA
Trigger: GGCCATCTCACAGGCCTCCCAAGGTGGGGAGGGTAC...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTGTACCCTCCCCACCTTaGGAGGCCTGTGAGATGGCC +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLVPSPP*EACEMA
Trigger: GGCCATCTCACAGGCCTCCCAAGGTGGGGAGGGTAC...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTACCCTCCCCACCTTaGGAGGCCTGTGAGATGGCC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPVPSPP*EACEMA
Trigger: GGCCATCTCACAGGCCTCCCAAGGTGGGGAGGGTAC...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTTGGCAGCAGTGCCCTaGCTACTGCTCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLLAAVP*LLLASA
Trigger: AGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCGGGGCTGGTAGCCGGTaGGAGAGCAGAACTAGGATG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPGAGSR*ESRTRM
Trigger: CATCCTAGTTCTGCTCTCCCACCGGCTACCAGCCCC...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCAGCCAGCATCTGCAGTaGCTGACTCCCGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSSQHLQ*LTPASR
Trigger: ACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCT...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGCCAGCATCTGCAGTaGCTGACTCCCGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSQHLQ*LTPASR
Trigger: ACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTAGCCCTGAGAGCTGCTaGTGCCGGATGAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPSPESC*CRMSAS
Trigger: AGAGGCGCTCATCCGGCACCAGCAGCTCTCAGGGCT...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTAGCCCTGAGAGCTGCTaGTGCCGGATGAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLSPESC*CRMSAS
Trigger: AGAGGCGCTCATCCGGCACCAGCAGCTCTCAGGGCT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATA +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLPPLGL*RLGDAI
Trigger: TATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCCCGCACCCGTGTTTaGGCCTCGATAGGCGTTACA +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSPRTRV*ASIGVT
Trigger: TGTAACGCCTATCGAGGCCCAAACACGGGTGCGGGG...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSLAGE*AGRQEQ
Trigger: TTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGA...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSSLAGE*AGRQEQ
Trigger: TTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCGCCGCCGCCTACGCTaGGTCTCGGAGCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWRRRLR*VSEPGE
Trigger: CTCCCCGGGCTCCGAGACTCAGCGTAGGCGGCGGCG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR TCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGTAGCGTCCTGCAAGTaGCTAAACTCGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLVASCK*LNSTKA
Trigger: CGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTAC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGCCCTTGGTGCCCTTaGGGTAGCCATGGGCATAGA +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPGPWCP*GSHGHR
Trigger: TCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCC...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGGCCCTTGGTGCCCTTaGGGTAGCCATGGGCATAGA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGGPWCP*GSHGHR
Trigger: TCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCACTGCTCGCCTCGGCTaGTTGTTGGTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPTARLG*LLVDAR
Trigger: CCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGT...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTTGCTTGTGGAGCCCTaGGAGCTGCTGGTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLLLVEP*ELLVPD
Trigger: ATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGCAA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCTTGTAGGACTCGGTTaGGGTGACCCCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPLVGLG*GDPVGA
Trigger: AGCTCCTACGGGGTCACCTCAACCGAGTCCTACAAG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCTTGTAGGACTCGGTTaGGGTGACCCCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPLVGLG*GDPVGA
Trigger: AGCTCCTACGGGGTCACCTCAACCGAGTCCTACAAG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCAGTCGTGGTCTCGGCTaGGGTTCTCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSRGLG*GSPHHH
Trigger: ATGATGGTGGGGAGAACCGCAGCCGAGACCACGACT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCGCTTGCCCTCCTGGCTaGCATACTCGCGAGGATATG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPACPPG*HTREDM
Trigger: CATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGC...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGCTTGCCCTCCTGGCTaGCATACTCGCGAGGATATG +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSACPPG*HTREDM
Trigger: CATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGCTTGCCCTCCTGGCTaGCATACTCGCGAGGATATG +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSACPPG*HTREDM
Trigger: CATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGTCATCCTCAGTGGCTaGCTGTGGCAGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSVILSG*LWQHPQ
Trigger: CTGAGGATGCTGCCACAGGCAGCCACTGAGGATGAC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCTGTGCCCTGGCTGTTaGCATAGCCCTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSLCPGC*HSPHPV
Trigger: AACAGGATGAGGGCTATGGCAACAGCCAGGGCACAG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGCGCGAGAGAAAGCCTaGATCGACACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGAREKA*IDTESA
Trigger: GGCCGACTCTGTGTCGATGCAGGCTTTCTCTCGCGC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGTGCCCTGGCTACTaGTCGCCTCGGCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSQCPGY*SPRLIV
Trigger: AACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTG...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCAGTGCCCTGGCTACTaGTCGCCTCGGCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPQCPGY*SPRLIV
Trigger: AACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGCCCTCCTTCGAGGGTaGCCCTGTCTCCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGALLRG*PCLLMS
Trigger: GGACATAAGGAGACAGGGGCACCCTCGAAGGAGGGC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTCTCCTTCTTCTCTTTaGCCTCCTTCGAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSSPSSL*PPSRVP
Trigger: GGGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCTGAGAGCTGCTGGTaGCGGATGAGCGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLPESCW*RMSASL
Trigger: CAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCAGAGGCTGTGGATATaGCGCCGTACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLQRLWI*RRTSSS
Trigger: AGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTG...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCCGTCCCGAGTAGGCTaGTCGAAGTCTACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPPSRVG*SKSTEA
Trigger: AGCCTCTGTAGACTTCGAGCAGCCTACTCGGGACGG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCTGGGTGATGCTTCCTaGAGGGACTCTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLLGDAS*RDSSRP
Trigger: GGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPHDLPA*VMLPAG
Trigger: CCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCTCAGTGGCTGCCTGTaGCAGCATCCTCAGCATGAC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPLSGCL*QHPQHD
Trigger: GTCATGCTGAGGATGCTGCCACAGGCAGCCACTGAG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACCGTGCGACTGCAGCTaGCCACGGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGPCDCS*PRMSSS
Trigger: TGAGGATGACATCCGTGGCCAGCTGCAGTCGCACGG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCCGTGCGACTGCAGCTaGCCACGGATGTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPPCDCS*PRMSSS
Trigger: TGAGGATGACATCCGTGGCCAGCTGCAGTCGCACGG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACCAGGGCCCCCAGGATaGAATCCATGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGPGPPG*NPWCCV
Trigger: CACACAGCACCATGGATTCCATCCTGGGGGCCCTGG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCCAGGGCCCCCAGGATaGAATCCATGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPPGPPG*NPWCCV
Trigger: CACACAGCACCATGGATTCCATCCTGGGGGCCCTGG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCGGGACCTGCTCCAGTaGGATCCCCTTTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPRDLLQ*DPLWFQ
Trigger: CTGGAACCAAAGGGGATCCCACTGGAGCAGGTCCCG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACGGGACCTGCTCCAGTaGGATCCCCTTTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGRDLLQ*DPLWFQ
Trigger: CTGGAACCAAAGGGGATCCCACTGGAGCAGGTCCCG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGGGGCTGGTAGCCGGTaGGAGAGCAGAACTAGGATG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGGAGSR*ESRTRM
Trigger: CATCCTAGTTCTGCTCTCCCACCGGCTACCAGCCCC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSSGDPC*CAVSRL
Trigger: TAGCCGAGAGACAGCACACCAGCATGGATCTCCCGA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTTGGGCGGTCGTCACTaGCCAATTTCGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSLGGRH*PISGDP
Trigger: TGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTGGTGGAGAGCTGGATaGAGGCAAAGCCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLWWRAG*RQSRGS
Trigger: TGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTGGTGGAGAGCTGGATaGAGGCAAAGCCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLWWRAG*RQSRGS
Trigger: TGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCACAGAGGCAGCACTaGTGCGACTGCCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLPQRQH*CDCLHW
Trigger: CCAATGAAGGCAGTCGCATCAGTGCTGCCTCTGTGG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCCACAGAGGCAGCACTaGTGCGACTGCCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPPQRQH*CDCLHW
Trigger: CCAATGAAGGCAGTCGCATCAGTGCTGCCTCTGTGG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCACAGCGGGTGACATaGTGGTATACGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPAQRVT*WYTTGC
Trigger: ACAGCCAGTCGTATACCATCATGTCACCCGCTGTGC...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCTTGTAGGACTCGGTTaGGGTGACCCCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPLVGLG*GDPVGA
Trigger: AGCTCCTACGGGGTCACCTCAACCGAGTCCTACAAG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLLTGPR*SGSPLS
Trigger: AGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPLTGPR*SGSPLS
Trigger: AGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTGGAGAAGTTGCTCTTaGAGCTGCTCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSWRSCS*SCSLGL
Trigger: GAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAAGTCGTGGTCTCGGCTaGGGTTCTCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGSRGLG*GSPHHH
Trigger: ATGATGGTGGGGAGAACCGCAGCCGAGACCACGACT...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCCTGTGCCCTGGCTGTTaGCATAGCCCTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSLCPGC*HSPHPV
Trigger: AACAGGATGAGGGCTATGGCAACAGCCAGGGCACAG...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCAGTGCCCTGGCTACTaGTCGCCTCGGCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLQCPGY*SPRLIV
Trigger: AACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCTCCTTCTTCTCTTTaGCCTCCTTCGAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPSPSSL*PPSRVP
Trigger: GGGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGA...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTAGATCCATGCTGGTGTaGTGTCTCTCGGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSRSMLV*CLSASA
Trigger: AGCACTAGCCGAGAGACAGCACACCAGCATGGATCT...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLISGDP*WCAVSR
Trigger: CCGAGAGACAGCACACCAGCATGGATCTCCCGAAAT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCTCCCCGCTGTAGGCTaGCACCAGTCCTCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLLPAVG*HQSSRR
Trigger: CCTCCGCGAGGACTGGTGGCAGCCTACAGCGGGGAG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTAGACAGGCCAGCTTCTaGCAGTCGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPRQASF*QSVSFS
Trigger: GGAGAAGCTCACCGACTGGCAGAAGCTGGCCTGTCT...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTAGACAGGCCAGCTTCTaGCAGTCGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLRQASF*QSVSFS
Trigger: GGAGAAGCTCACCGACTGGCAGAAGCTGGCCTGTCT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGTCCCGAGTAGGCTaGTCGAAGTCTACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLPSRVG*SKSTEA
Trigger: AGCCTCTGTAGACTTCGAGCAGCCTACTCGGGACGG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCCTGCAGCATCCGACTaGCAATGTTGTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPPAASD*QCCHCP
Trigger: TGGGCAGTGACAACATTGGCAGTCGGATGCTGCAGG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTGCGGCCCAGGCCGCTaGCCTCTTTCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLCGPGR*PLSSPW
Trigger: CCATGGGCTGGAAAGAGGGCAGCGGCCTGGGCCGCA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCGGATCTCCGCACTCTaGTCCTCAGATGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPRISAL*SSDESS
Trigger: TGACGACTCATCTGAGGAGCAGAGTGCGGAGATCCG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCGGATCTCCGCACTCTaGTCCTCAGATGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPRISAL*SSDESS
Trigger: TGACGACTCATCTGAGGAGCAGAGTGCGGAGATCCG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLHDLPA*VMLPAG
Trigger: CCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGHDLPA*VMLPAG
Trigger: CCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGGATGTCATCCTCAGTaGCTGCCTGTGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLGCHPQ*LPVAAS
Trigger: GGATGCTGCCACAGGCAGCCACTGAGGATGACATCC...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTATACGACTGGCTGTTaGCAGCAGTGCCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSYTTGC*QQCPGY
Trigger: GTAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTATGATGGTATACGACTaGCTGTTGGCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSMMVYD*LLAAVP
Trigger: GGGCACTGCTGCCAACAGCCAGTCGTATACCATCAT...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGGGATGGGTAGGGCTCTaGAGCTCAGATTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLGWVGL*SSDLST
Trigger: TGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCC...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPSGDPC*CAVSRL
Trigger: TAGCCGAGAGACAGCACACCAGCATGGATCTCCCGA...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGGGCTGGGGAGTGGGCTaGCCGACAAGAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLGWGVG*PTRARP
Trigger: GGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCC...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGCTGGGGAGTGGGCTaGCCGACAAGAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALGWGVG*PTRARP
Trigger: GGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGTAGCGTCCTGCAAGTaGCTAAACTCGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGVASCK*LNSTKA
Trigger: CGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTAC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTCTGGCCCAGGATGTTaGGGGAGTGCTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPSGPGC*GSADWL
Trigger: AAGCCAATCAGCACTCCCTCAACATCCTGGGCCAGA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCTTCTGCTCTGCCTCTaGCTTGGGCACGCCACATTT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLLLLCL*LGHATF
Trigger: AAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACTTCTGCTCTGCCTCTaGCTTGGGCACGCCACATTT +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGLLLCL*LGHATF
Trigger: AAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCTTCTGCTCTGCCTCTaGCTTGGGCACGCCACATTT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPLLLCL*LGHATF
Trigger: AAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTCTGCTTGTCCTTTATaGCGCGCACGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLSACPL*RARWRR
Trigger: CCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATCTGCTTGTCCTTTATaGCGCGCACGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGSACPL*RARWRR
Trigger: CCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGCTGCTGGTGCCGGATaGGCGCCTCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLAAGAG*APLCWG
Trigger: TCCCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGC...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTAAGTGGGCTCGCCGGTaGATCTCAAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPKWARR*ISRFCL
Trigger: CAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTT...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAAGTGGGCTCGCCGGTaGATCTCAAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPKWARR*ISRFCL
Trigger: CAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTAGGACTCGGTTGAGGTaGCCCCGTAGGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALRTRLR*PRRSCP
Trigger: GGGGCAGCTCCTACGGGGTCACCTCAACCGAGTCCT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTGGAGAAGTTGCTCTTaGAGCTGCTCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLWRSCS*SCSLGL
Trigger: GAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPRHSHA*PPGCHT
Trigger: AGTATGGCAGCCAGGAGGGCAAGCATGACTATGACG...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGAATCCTCCGCACTCTaGTCCTCAGATGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSESSAL*SSDESS
Trigger: TGACGACTCATCTGAGGAGCAGAGTGCGGAGGATTC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCAGCCGAACCTCCCGTaGTTGCACGCCGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALQPNLP*LHAVRL
Trigger: CAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCTGATTGTTGGTAGATaGCAGGAGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPLIVGR*QEQHQA
Trigger: AGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTCTCCTTCTTCTCTTTaGCCTCCTTCGAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLSPSSL*PPSRVP
Trigger: GGGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCAGATCCATGCTGGTGTaGTGTCTCTCGGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSRSMLV*CLSASA
Trigger: AGCACTAGCCGAGAGACAGCACACCAGCATGGATCT...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGATCCATGCTGGTGTaGTGTCTCTCGGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPRSMLV*CLSASA
Trigger: AGCACTAGCCGAGAGACAGCACACCAGCATGGATCT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTCTCTGCGTTCAGCTaGACGGTCCCGGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPFSAFS*TVPVLH
Trigger: ATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAA...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTCTCTGCGTTCAGCTaGACGGTCCCGGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPFSAFS*TVPVLH
Trigger: ATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAA...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCTGGCGGCTCGGGGATaGCATACTTTTCTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLLAARG*HTFLCV
Trigger: AACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCTGGCGGCTCGGGGATaGCATACTTTTCTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLLAARG*HTFLCV
Trigger: AACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACAGAGGCTGTGGATATaGCGCCGTACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGQRLWI*RRTSSS
Trigger: AGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTGCAGCATCCGACTaGCAATGTTGTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLPAASD*QCCHCP
Trigger: TGGGCAGTGACAACATTGGCAGTCGGATGCTGCAGG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCAATGCCCTGCTTCTTaGGGCCCAGGCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALQCPAS*GPGRCP
Trigger: AGGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLKPRFS*VCLSFM
Trigger: CATAAAGGACAAGCAGACCCAACTGAACCGCGGCTT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGAGCAGCACCAGGCTaGGCGCGAGAGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALGAAPG*AREKAC
Trigger: GCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGGAGCAGCACCAGGCTaGGCGCGAGAGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLGAAPG*AREKAC
Trigger: GCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCC...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAGTAATACTGGGAGTTaGGGTCATAGTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLSNTGS*GHSRGR
Trigger: CCGGCCTCTACTATGACCCCAACTCCCAGTATTACT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCCTTCTTCTCGAGGATaGCATAGCCAGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPPSSRG*HSQHLQ
Trigger: CTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLSGDPC*CAVSRL
Trigger: TAGCCGAGAGACAGCACACCAGCATGGATCTCCCGA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTCAAGGTTTTGCTTGTaGAGCCCTGAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSRFCL*SPESCW
Trigger: CCAGCAGCTCTCAGGGCTCCACAAGCAAAACCTTGA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGTCTACAGAGGCTGTaGATATGCCGCCGTACTTCC +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSLQRL*ICRRTS
Trigger: GGAAGTACGGCGGCATATCCACAGCCTCTGTAGACT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCCGTGCGACTGCAGCTaGCCACGGATCTCCGCACTC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALPCDCS*PRISAL
Trigger: GAGTGCGGAGATCCGTGGCCAGCTGCAGTCGCACGG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGTCACCAGCTCAAAATaGCGACGACGAGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSVTSSK*RRREGS
Trigger: ACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGAC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377604.8
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAATACTCGCGAGGATATaGACGGTAGTCCATGTCCCG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGILARI*TVVHVP
Trigger: CGGGACATGGACTACCGTTCATATCCTCGCGAGTAT...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGACTCTGCTCCTCAGATaGGTCGTCATAGTCATGCTT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLTLLLR*VVIVML
Trigger: AAGCATGACTATGACGACTCATCTGAGGAGCAGAGT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTTTGAGCACAGCGGGTaGCATGATGGTATACGACTG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPFEHSG*HDGIRL
Trigger: CAGTCGTATACCATCATGTCACCCGCTGTGCTCAAA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTTGAGCACAGCGGGTaGCATGATGGTATACGACTG +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPFEHSG*HDGIRL
Trigger: CAGTCGTATACCATCATGTCACCCGCTGTGCTCAAA...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTCCTTGGCAATCTGTTaGGCTGTCTTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSLAIC*AVLVLC
Trigger: GCACAAGACCAAGACAGCTCAACAGATTGCCAAGGA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTCCTTGGCAATCTGTTaGGCTGTCTTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPSLAIC*AVLVLC
Trigger: GCACAAGACCAAGACAGCTCAACAGATTGCCAAGGA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTTTCTTTTTGTTTGTTaGGACTGCGGGCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSFLFVC*DCGPSV
Trigger: AACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCTGGGTGATGCTTCCTaGAGGGACTCTCCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLLGDAS*RDSPPP
Trigger: TGGGGGCGGAGAGTCCCTGCAGGAAGCATCACCCAG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329236.8
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCCCAGCCACCCCCGCTaGTGCTACCATGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALPSHPR*CYHDLP
Trigger: TGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACT +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLRHSHA*PPGCHT
Trigger: AGTATGGCAGCCAGGAGGGCAAGCATGACTATGACG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGAATCCTCCGCACTCTaGTCCTCAGATGAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPESSAL*SSDESS
Trigger: TGACGACTCATCTGAGGAGCAGAGTGCGGAGGATTC...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTTGCACGCCGTGCGACTaGAGCTGGCCACGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALCTPCD*SWPRMS
Trigger: TGACATCCGTGGCCAGCTGCAGTCGCACGGCGTGCA...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGC +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGRFSWV*LSFMTR
Trigger: GCGCGTCATAAAGGACAAGCAGACCCAACTGAACCG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLRFSWV*LSFMTR
Trigger: GCGCGTCATAAAGGACAAGCAGACCCAACTGAACCG...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTCTGATTGTTGGTAGATaGCAGGAGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPLIVGR*QEQHQA
Trigger: AGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAG...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAAGATCCATGCTGGTGTaGTGTCTCTCGGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGRSMLV*CLSASA
Trigger: AGCACTAGCCGAGAGACAGCACACCAGCATGGATCT...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLISGDP*WCAVSR
Trigger: CCGAGAGACAGCACACCAGCATGGATCTCCCGAAAT...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCTCCCCGCTGTAGGCTaGCACCAGTCCTCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWLPAVG*HQSSRR
Trigger: CCTCCGCGAGGACTGGTGGCAGCCTACAGCGGGGAG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATTCTCTGCGTTCAGCTaGACGGTCCCGGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGFSAFS*TVPVLH
Trigger: ATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTGCCATACTTTTCTCTaGGTTCAGCTGCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPCHTFL*VQLHGP
Trigger: GGGACCGTGCAGCTGAACGCAGAGAAAAGTATGGCA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGCGTTACAATGCCCTaGTTCTTGCGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALGVTMP*FLRPRP
Trigger: CGGCCTGGGCCGCAAGAAGCAGGGCATTGTAACGCC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGTAGGAGCTGCCCCGTaGACCCAGGCCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSVGAAP*TQAGAP
Trigger: CGGGGCTCCGGCCTGGGTGCACGGGGCAGCTCCTAC...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTAAGCGCCAAGCGCGCTaGCCTCCCAGGGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALKRQAR*PPRETH
Trigger: GTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCTCCCGGCCACCCAGTaGCAGTGTCTGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLLPATQ*QCLLIQ
Trigger: CTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLIHGAV*VQVAQN
Trigger: ATTTTGCGCAACCTGAACCCACACAGCACCATGGAT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGGCCGTCGATAGTGAGTaGTGGGTGCAGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLAVDSE*WVQGLQ
Trigger: CTGCAGGCCCTGCACCCACCACTCACTATCGACGGC...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGATGATGGTATACGACTaGCTGTTGGCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLMMVYD*LLAAVP
Trigger: GGGCACTGCTGCCAACAGCCAGTCGTATACCATCAT...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGGATGGGTAGGGCTCTaGAGCTCAGATTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLGWVGL*SSDLST
Trigger: TGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCC...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGGATGGGTAGGGCTCTaGAGCTCAGATTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGGWVGL*SSDLST
Trigger: TGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGTAATACTGGGAGTTaGGGTCATAGTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPSNTGS*GHSRGR
Trigger: CCGGCCTCTACTATGACCCCAACTCCCAGTATTACT...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAGCGTTCCATGTCCTTaGCAATCTGTTGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLSVPCP*QSVELS
Trigger: AGACAGCTCAACAGATTGCCAAGGACATGGAACGCT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGGGCTGGGGAGTGGGCTaGCCGACAAGAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWGWGVG*PTRARP
Trigger: GGGCCTTGCTCTTGTCGGCCAGCCCACTCCCCAGCC...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCACTCTGCTCCTCAGATaGGTCGTCATAGTCATGCTT +
Preference number: 4 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSTLLLR*VVIVML
Trigger: AAGCATGACTATGACGACTCATCTGAGGAGCAGAGT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGACCTTGGGAGGCCTGTaGGATGGCCCACTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGETLGGL*DGPLGR
Trigger: GCGGCCCAGTGGGCCATCTCACAGGCCTCCCAAGGT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTCCTTGGCAATCTGTTaGGCTGTCTTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPSLAIC*AVLVLC
Trigger: GCACAAGACCAAGACAGCTCAACAGATTGCCAAGGA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALSICSG*LPPLVI
Trigger: GATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTTGCTTGTGGAGCCCTaGGAGCTGCTGGTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLLLVEP*ELLVPD
Trigger: ATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGCAA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGAGGACTCGGTTGAGGTaGCCCCGTAGGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWRTRLR*PRRSCP
Trigger: GGGGCAGCTCCTACGGGGTCACCTCAACCGAGTCCT...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTTTACAAAACAGGACGTaGTCCCAGCCCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSLQNRT*SQPNFP
Trigger: TGGAAAATTGGGCTGGGATCACGTCCTGTTTTGTAA...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGCGCGAGAGAAAGCCTaGATCGACACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLAREKA*IDTESA
Trigger: GGCCGACTCTGTGTCGATGCAGGCTTTCTCTCGCGC...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCCCTCCTTCGAGGGTaGCCCTGTCTCCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALALLRG*PCLLMS
Trigger: GGACATAAGGAGACAGGGGCACCCTCGAAGGAGGGC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCCTGAGAGCTGCTGGTaGCGGATGAGCGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLPESCW*RMSASL
Trigger: CAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPIHGAV*VQVAQN
Trigger: ATTTTGCGCAACCTGAACCCACACAGCACCATGGAT...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPIHGAV*VQVAQN
Trigger: ATTTTGCGCAACCTGAACCCACACAGCACCATGGAT...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCCAGGGCCCCCAGGATaGAATCCATGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLPGPPG*NPWCCV
Trigger: CACACAGCACCATGGATTCCATCCTGGGGGCCCTGG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGGGGAGGCCTGTGAGATaGCCCACTGGGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWGRPVR*PTGPQQ
Trigger: TTGCTGCGGCCCAGTGGGCCATCTCACAGGCCTCCC...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGGGCTGGTAGCCGGTaGGAGAGCAGAACTAGGATG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALGAGSR*ESRTRM
Trigger: CATCCTAGTTCTGCTCTCCCACCGGCTACCAGCCCC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAGCGTTCCATGTCCTTaGCAATCTGTTGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPSVPCP*QSVELS
Trigger: AGACAGCTCAACAGATTGCCAAGGACATGGAACGCT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCCCCGCACCCGTGTTTaGGCCTCGATAGGCGTTACA +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLPRTRV*ASIGVT
Trigger: TGTAACGCCTATCGAGGCCCAAACACGGGTGCGGGG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSLAGE*AGRQEQ
Trigger: TTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCACCTCAATTTGATTTaGTCAAGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPHLNLI*SSPLWL
Trigger: CAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCACCTCAATTTGATTTaGTCAAGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPHLNLI*SSPLWL
Trigger: CAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGAGTGGCAGTGTCTGCTaGTCCAGCCTCGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWSGSVC*SSLVPR
Trigger: CCTCGGCACGAGGCTGGATCAGCAGACACTGCCACT...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCCACAGAGGCAGCACTaGTGCGACTGCCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLPQRQH*CDCLHW
Trigger: CCAATGAAGGCAGTCGCATCAGTGCTGCCTCTGTGG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTTTCTTTTTGTTTGTTaGGACTGCGGGCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPFLFVC*DCGPSV
Trigger: AACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTTTCTTTTTGTTTGTTaGGACTGCGGGCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLFLFVC*DCGPSV
Trigger: AACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGAGTCGTGGTCTCGGCTaGGGTTCTCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSRGLG*GSPHHH
Trigger: ATGATGGTGGGGAGAACCGCAGCCGAGACCACGACT...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGAGACAGGCCAGCTTCTaGCAGTCGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLRQASF*QSVSFS
Trigger: GGAGAAGCTCACCGACTGGCAGAAGCTGGCCTGTCT...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGTCTCGGGGGAAGCCTaGCGGGCCGGTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDVSGEA*RAGGAV
Trigger: CACAGCCCCACCGGCCCGCCAGGCTTCCCCCGAGAC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGGGGAGGCCTGTGAGATaGCCCACTGGGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEGRPVR*PTGPQQ
Trigger: TTGCTGCGGCCCAGTGGGCCATCTCACAGGCCTCCC...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPAAPRR*PRYPPH
Trigger: GTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTCAAGCCCTCTCTaGCTGGGGAGTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEWSSPL*LGSGLA
Trigger: GGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCA...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGACACCTCAATTTGATTTaGTCAAGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGHLNLI*SSPLWL
Trigger: CAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTG...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCCGTGCGACTGCAGCTaGCCACGGATCTCCGCACTC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEPCDCS*PRISAL
Trigger: GAGTGCGGAGATCCGTGGCCAGCTGCAGTCGCACGG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTCGATGGTGGAGAGCTaGATGAAGGCAAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLSMVES*MKAKPR
Trigger: CCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGA...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCCGCTGCTGCTACCATaGTCTGCCAGCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWPLLLP*SASLGD
Trigger: ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGGTAGCGTCCTGCAAGTaGCTAAACTCGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLVASCK*LNSTKA
Trigger: CGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTAC...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCTGGCCCAGGATGTTaGGGGAGTGCTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSGPGC*GSADWL
Trigger: AAGCCAATCAGCACTCCCTCAACATCCTGGGCCAGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCTTCTGCTCTGCCTCTaGCTTGGGCACGCCACATTT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLLLLCL*LGHATF
Trigger: AAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGAGTGGCAGTGTCTGCTaGTCCAGCCTCGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGESGSVC*SSLVPR
Trigger: CCTCGGCACGAGGCTGGATCAGCAGACACTGCCACT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTCTGCTTGTCCTTTATaGCGCGCACGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLSACPL*RARWRR
Trigger: CCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGA...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCTGCTTGTCCTTTATaGCGCGCACGTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSACPL*RARWRR
Trigger: CCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTGGAGAAGTTGCTCTTaGAGCTGCTCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLWRSCS*SCSLGL
Trigger: GAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCA...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATTACAAAACAGGACGTaGTCCCAGCCCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGLQNRT*SQPNFP
Trigger: TGGAAAATTGGGCTGGGATCACGTCCTGTTTTGTAA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCCCAGCCACCCCCGCTaGTGCTACCATGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEPSHPR*CYHDLP
Trigger: TGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCGTGCTTGCACGCCGTaGGACTGCAGCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPRACTP*DCSWPR
Trigger: CCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCCGCAGCAATGGCAGTaGTGGCCACAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEPQQWQ*WPQRQH
Trigger: GTGCTGCCTCTGTGGCCAGCACTGCCATTGCTGCGG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGGCCCTCCTTCGAGGGTaGCCCTGTCTCCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWALLRG*PCLLMS
Trigger: GGACATAAGGAGACAGGGGCACCCTCGAAGGAGGGC...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCAGAGGCTGTGGATATaGCGCCGTACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLQRLWI*RRTSSS
Trigger: AGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCTCCCGGCCACCCAGTaGCAGTGTCTGCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGELPATQ*QCLLIQ
Trigger: CTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTCCCTGTGACAGGGCTTaGGAGGCCAGGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSPCDRA*EARTPW
Trigger: CCAGGGAGTCCTGGCCTCCCAAGCCCTGTCACAGGG...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTGTGAGATGGCCCACTaGGCCGCAGCAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWCEMAH*AAAMAV
Trigger: CACTGCCATTGCTGCGGCCCAGTGGGCCATCTCACA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATACCTTGGGAGGCCTGTaGGATGGCCCACTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDTLGGL*DGPLGR
Trigger: GCGGCCCAGTGGGCCATCTCACAGGCCTCCCAAGGT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGTGGGCTCGCCGGTaGATCTCAAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLKWARR*ISRFCL
Trigger: CAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTT...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCGTGCTTGCACGCCGTaGGACTGCAGCTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLRACTP*DCSWPR
Trigger: CCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGATGGAATCCATGGTaGTGTGTGGGTTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALGWNPW*CVGSGC
Trigger: GCAACCTGAACCCACACAGCACCATGGATTCCATCC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTCCGCAGCAATGGCAGTaGTGGCCACAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSPQQWQ*WPQRQH
Trigger: GTGCTGCCTCTGTGGCCAGCACTGCCATTGCTGCGG...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCTGATTGTTGGTAGATaGCAGGAGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALLIVGR*QEQHQA
Trigger: AGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTTCTCTGCGTTCAGCTaGACGGTCCCGGTACTTCAT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLFSAFS*TVPVLH
Trigger: ATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTTGCCATACTTTTCTCTaGGTTCAGCTGCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALCHTFL*VQLHGP
Trigger: GGGACCGTGCAGCTGAACGCAGAGAAAAGTATGGCA...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTGCACGCCGTGCGACTaGAGCTGGCCACGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPCTPCD*SWPRIS
Trigger: GGAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCA...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCTCAGTGGCTGCCTGTaGCAGCATCCTCAGCATGAC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWLSGCL*QHPQHD
Trigger: GTCATGCTGAGGATGCTGCCACAGGCAGCCACTGAG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGAGGATCTGCAGCAGCTaGGCTGCCTCCACGATGGTG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGERICSS*AASTMV
Trigger: CACCATCGTGGAGGCAGCCCAGCTGCTGCAGATCCT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCGGGACCTGCTCCAGTaGGATCCCCTTTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGERDLLQ*DPLWFQ
Trigger: CTGGAACCAAAGGGGATCCCACTGGAGCAGGTCCCG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGGAGCAGCACCAGGCTaGGCGCGAGAGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPGAAPG*AREKAC
Trigger: GCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCCTTCTTCTCGAGGATaGCATAGCCAGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLPSSRG*HSQHLQ
Trigger: CTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCCTTCTTCTCGAGGATaGCATAGCCAGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALPSSRG*HSQHLQ
Trigger: CTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCAAGGTTTTGCTTGTaGAGCCCTGAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSRFCL*SPESCW
Trigger: CCAGCAGCTCTCAGGGCTCCACAAGCAAAACCTTGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAGTCTACAGAGGCTGTaGATATGCCGCCGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLSLQRL*ICRRTS
Trigger: GGAAGTACGGCGGCATATCCACAGCCTCTGTAGACT...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGGCCCCGGCTCTGACCTaGAGATTTGTTCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEAPALT*RFVPHQ
Trigger: CTGATGCGGAACAAATCTTCAGGTCAGAGCCGGGGC...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTCTGGCCCAGGATGTTaGGGGAGTGCTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWSGPGC*GSADWL
Trigger: AAGCCAATCAGCACTCCCTCAACATCCTGGGCCAGA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGTCATTGGCGTTCTCTaGGCTTGGCTCCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSVIGVL*AWLRAL
Trigger: CAGGGCTCGGAGCCAAGCTCAGAGAACGCCAATGAC...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTGGAGAGCTGGATaGAGGCAAAGCCGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEWWRAG*RQSRGS
Trigger: TGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCA...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCCCTTGGTGCCCTTaGGGTAGCCATGGGCATAGA +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSGPWCP*GSHGHR
Trigger: TCTATGCCCATGGCTACCTCAAGGGCACCAAGGGCC...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGGCACAGCGGGTGACATaGTGGTATACGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWAQRVT*WYTTGC
Trigger: ACAGCCAGTCGTATACCATCATGTCACCCGCTGTGC...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTTTGAGCACAGCGGGTaGCATGATGGTATACGACTG +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLFEHSG*HDGIRL
Trigger: CAGTCGTATACCATCATGTCACCCGCTGTGCTCAAA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCCTTGGCAATCTGTTaGGCTGTCTTGGTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSLAIC*AVLVLC
Trigger: GCACAAGACCAAGACAGCTCAACAGATTGCCAAGGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSSICSG*LPPLVI
Trigger: GATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATAGGACTCGGTTGAGGTaGCCCCGTAGGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDRTRLR*PRRSCP
Trigger: GGGGCAGCTCCTACGGGGTCACCTCAACCGAGTCCT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGGTCATCCTCAGTGGCTaGCTGTGGCAGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEVILSG*LWQHPQ
Trigger: CTGAGGATGCTGCCACAGGCAGCCACTGAGGATGAC...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCAGCCGAACCTCCCGTaGTTGCACGCCGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLQPNLP*LHAVRL
Trigger: CAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCTGTGCCCTGGCTGTTaGCATAGCCCTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWLCPGC*HSPHPV
Trigger: AACAGGATGAGGGCTATGGCAACAGCCAGGGCACAG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGGAGGCCTCGGGACCTaGTCCAGTGGGATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPGGLGT*SSGIPF
Trigger: AAAGGGGATCCCACTGGAGCAGGTCCCGAGGCCTCC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGGCTGTTGGCAGCAGTaGCCTGGCTACTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPGCWQQ*PGYCSP
Trigger: AGGCGAGCAGTAGCCAGGGCACTGCTGCCAACAGCC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTCTCCTTCTTCTCTTTaGCCTCCTTCGAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWSPSSL*PPSRVP
Trigger: GGGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGAGACAGGCCAGCTTCTaGCAGTCGGTGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGERQASF*QSVSFS
Trigger: GGAGAAGCTCACCGACTGGCAGAAGCTGGCCTGTCT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTCCTGAGAGCTGCTGGTaGCGGATGAGCGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSPESCW*RMSASL
Trigger: CAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGG...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCCGTCCCGAGTAGGCTaGTCGAAGTCTACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEPSRVG*SKSTEA
Trigger: AGCCTCTGTAGACTTCGAGCAGCCTACTCGGGACGG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCCAGGGAAACTCACTaGCGCCTACTCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPRETH*RLLPAG
Trigger: GCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCCCAGGGAAACTCACTaGCGCCTACTCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLPRETH*RLLPAG
Trigger: GCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCTGCGAGCGGTCAGTaGCTCCATAGCGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPASGQ*LHSGQS
Trigger: GGACTGGCCGCTATGGAGCCACTGACCGCTCGCAGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCCTGCGAGCGGTCAGTaGCTCCATAGCGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLPASGQ*LHSGQS
Trigger: GGACTGGCCGCTATGGAGCCACTGACCGCTCGCAGG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCCTGTGACAGGGCTTaGGAGGCCAGGACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPCDRA*EARTPW
Trigger: CCAGGGAGTCCTGGCCTCCCAAGCCCTGTCACAGGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGGGAGGCCTGTGAGATaGCCCACTGGGCCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWGRPVR*PTGPQQ
Trigger: TTGCTGCGGCCCAGTGGGCCATCTCACAGGCCTCCC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGAGCAGCACCAGGCTaGGCGCGAGAGAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLGAAPG*AREKAC
Trigger: GCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTTGGCAGCAGTGCCCTaGCTACTGCTCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPLAAVP*LLLASA
Trigger: AGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAA...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTAGTAATACTGGGAGTTaGGGTCATAGTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALSNTGS*GHSRGR
Trigger: CCGGCCTCTACTATGACCCCAACTCCCAGTATTACT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTTGGGCGGTCGTCACTaGCCAATTTCGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWLGGRH*PISGDP
Trigger: TGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGTCCTCGCGGAGGGCTTaGGCGGTCGTCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSSRRA*AVVTGQ
Trigger: TTGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGA...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTCTCTGGCTGGGGAGTaGGCTGGCCGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSSLAGE*AGRQEQ
Trigger: TTGCTCTTGTCGGCCAGCCCACTCCCCAGCCAGAGA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGTGGTCAAGCCCTCTCTaGCTGGGGAGTGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLWSSPL*LGSGLA
Trigger: GGCCAGCCCACTCCCCAGCCAGAGAGGGCTTGACCA...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTAGGATCTGCAGCAGCTaGGCTGCCTCGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSRICSS*AASMVE
Trigger: CTCCACCATCGAGGCAGCCCAGCTGCTGCAGATCCT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628161.2
CDS-3UTR TCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCCGCTGCTGCTACCATaGTCTGCCAGCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPPLLLP*SASLGD
Trigger: ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGTGGCAGTGTCTGCTaGTCCAGCCTCGTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSGSVC*SSLVPR
Trigger: CCTCGGCACGAGGCTGGATCAGCAGACACTGCCACT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGGCACAGCGGGTGACATaGTGGTATACGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEAQRVT*WYTTGC
Trigger: ACAGCCAGTCGTATACCATCATGTCACCCGCTGTGC...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGAAGTGGGCTCGCCGGTaGATCTCAAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWKWARR*ISRFCL
Trigger: CAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTT...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCCAGCCACCCCCGCTaGTGCTACCATGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPSHPR*CYHDLP
Trigger: TGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGCTGATCCAGCCTCGTaGCGAGGGGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWADPAS*RGAASA
Trigger: AGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGGGATGGAATCCATGGTaGTGTGTGGGTTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWGWNPW*CVGSGC
Trigger: GCAACCTGAACCCACACAGCACCATGGATTCCATCC...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGC +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWRFSWV*LSFMTR
Trigger: GCGCGTCATAAAGGACAAGCAGACCCAACTGAACCG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCGCAGCAATGGCAGTaGTGGCCACAGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPQQWQ*WPQRQH
Trigger: GTGCTGCCTCTGTGGCCAGCACTGCCATTGCTGCGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCCTGCAGCATCCGACTaGCAATGTTGTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEPAASD*QCCHCP
Trigger: TGGGCAGTGACAACATTGGCAGTCGGATGCTGCAGG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGGCGTTACAATGCCCTaGTTCTTGCGGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWGVTMP*FLRPRP
Trigger: CGGCCTGGGCCGCAAGAAGCAGGGCATTGTAACGCC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLIHGAV*VQVAQN
Trigger: ATTTTGCGCAACCTGAACCCACACAGCACCATGGAT...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTACGATGGTGGAGAGCTaGATGAAGGCAAAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSTMVES*MKAKPR
Trigger: CCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTTGGCAGCAGTGCCCTaGCTACTGCTCGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWLAAVP*LLLASA
Trigger: AGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGGGGCTGGTAGCCGGTaGGAGAGCAGAACTAGGATG +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPGAGSR*ESRTRM
Trigger: CATCCTAGTTCTGCTCTCCCACCGGCTACCAGCCCC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATA +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWPPLGL*RLGDAI
Trigger: TATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATA +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPPLGL*RLGDAI
Trigger: TATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCACCTCAATTTGATTTaGTCAAGCCCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALHLNLI*SSPLWL
Trigger: CAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCGCTGCTGCTACCATaGTCTGCCAGCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPLLLP*SASLGD
Trigger: ATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGCCCCGGCTCTGACCTaGAGATTTGTTCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPAPALT*RFVPHQ
Trigger: CTGATGCGGAACAAATCTTCAGGTCAGAGCCGGGGC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTCTGGCCCAGGATGTTaGGGGAGTGCTGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSSGPGC*GSADWL
Trigger: AAGCCAATCAGCACTCCCTCAACATCCTGGGCCAGA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCATTGGCGTTCTCTaGGCTTGGCTCCGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLVIGVL*AWLRAL
Trigger: CAGGGCTCGGAGCCAAGCTCAGAGAACGCCAATGAC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCACTGCTCGCCTCGGCTaGTTGTTGGTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPTARLG*LLVDAR
Trigger: CCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGT...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSICSG*LPPLVI
Trigger: GATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTTGCTTGTGGAGCCCTaGGAGCTGCTGGTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWLLVEP*ELLVPD
Trigger: ATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGCAA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCCCCACCATCATCCTaGGAGCGGTCAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWSPPSS*ERSVAP
Trigger: TGGAGCCACTGACCGCTCGCAGGATGATGGTGGGGA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGGGATGGAATCCATGGTaGTGTGTGGGTTCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEGWNPW*CVGSGC
Trigger: GCAACCTGAACCCACACAGCACCATGGATTCCATCC...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGCGCGAGAGAAAGCCTaGATCGACACAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWAREKA*IDTESA
Trigger: GGCCGACTCTGTGTCGATGCAGGCTTTCTCTCGCGC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGCCCTCCTTCGAGGGTaGCCCTGTCTCCTTATGTCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDALLRG*PCLLMS
Trigger: GGACATAAGGAGACAGGGGCACCCTCGAAGGAGGGC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEISGDP*WCAVSR
Trigger: CCGAGAGACAGCACACCAGCATGGATCTCCCGAAAT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCCTGAGAGCTGCTGGTaGCGGATGAGCGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWPESCW*RMSASL
Trigger: CAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTCTGGCGGCTCGGGGATaGCATACTTTTCTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSLAARG*HTFLCV
Trigger: AACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAG...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCTGGGTGATGCTTCCTaGAGGGACTCTTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDLGDAS*RDSSRP
Trigger: GGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCCAGGGCCCCCAGGATaGAATCCATGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLPGPPG*NPWCCV
Trigger: CACACAGCACCATGGATTCCATCCTGGGGGCCCTGG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWKPRFS*VCLSFM
Trigger: CATAAAGGACAAGCAGACCCAACTGAACCGCGGCTT...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGAGGATCTGCAGCAGCTaGGCTGCCTCCACGATGGTG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWRICSS*AASTMV
Trigger: CACCATCGTGGAGGCAGCCCAGCTGCTGCAGATCCT...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGGATCTGCAGCAGCTaGGCTGCCTCCACGATGGTG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLRICSS*AASTMV
Trigger: CACCATCGTGGAGGCAGCCCAGCTGCTGCAGATCCT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTGTGAGATGGCCCACTaGGCCGCAGCAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWCEMAH*AAAMAV
Trigger: CACTGCCATTGCTGCGGCCCAGTGGGCCATCTCACA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCGGGACCTGCTCCAGTaGGATCCCCTTTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLRDLLQ*DPLWFQ
Trigger: CTGGAACCAAAGGGGATCCCACTGGAGCAGGTCCCG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTATACGACTGGCTGTTaGCAGCAGTGCCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSYTTGC*QQCPGY
Trigger: GTAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGATGATGGTATACGACTaGCTGTTGGCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEMMVYD*LLAAVP
Trigger: GGGCACTGCTGCCAACAGCCAGTCGTATACCATCAT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATAGCCAGCATCTGCAGTaGCTGACTCCCGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDSQHLQ*LTPASR
Trigger: ACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTCAAGGTTTTGCTTGTaGAGCCCTGAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGESRFCL*SPESCW
Trigger: CCAGCAGCTCTCAGGGCTCCACAAGCAAAACCTTGA...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCCCCGCACCCGTGTTTaGGCCTCGATAGGCGTTACA +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDPRTRV*ASIGVT
Trigger: TGTAACGCCTATCGAGGCCCAAACACGGGTGCGGGG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGCCCCGGCTCTGACCTaGAGATTTGTTCCGCATCAG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWAPALT*RFVPHQ
Trigger: CTGATGCGGAACAAATCTTCAGGTCAGAGCCGGGGC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCCACAGAGGCAGCACTaGTGCGACTGCCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLPQRQH*CDCLHW
Trigger: CCAATGAAGGCAGTCGCATCAGTGCTGCCTCTGTGG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGACTGCTCGCCTCGGCTaGTTGTTGGTAGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWTARLG*LLVDAR
Trigger: CCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGT...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTTTCTTTTTGTTTGTTaGGACTGCGGGCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWFLFVC*DCGPSV
Trigger: AACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWLTGPR*SGSPLS
Trigger: AGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGTCGTGGTCTCGGCTaGGGTTCTCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSRGLG*GSPHHH
Trigger: ATGATGGTGGGGAGAACCGCAGCCGAGACCACGACT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCAGTGCCCTGGCTACTaGTCGCCTCGGCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWQCPGY*SPRLIV
Trigger: AACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCCTGCAGCATCCGACTaGCAATGTTGTCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPPAASD*QCCHCP
Trigger: TGGGCAGTGACAACATTGGCAGTCGGATGCTGCAGG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGGATGTCATCCTCAGTaGCTGCCTGTGGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDGCHPQ*LPVAAS
Trigger: GGATGCTGCCACAGGCAGCCACTGAGGATGACATCC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTATGATGGTATACGACTaGCTGTTGGCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSMMVYD*LLAAVP
Trigger: GGGCACTGCTGCCAACAGCCAGTCGTATACCATCAT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTCAAGGTTTTGCTTGTaGAGCCCTGAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSSRFCL*SPESCW
Trigger: CCAGCAGCTCTCAGGGCTCCACAAGCAAAACCTTGA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCTTGAAGCTGCTCACTaGGCCTCGTTGAAGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLLEAAH*ASLKRV
Trigger: GACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGACTCTGCTCCTCAGATaGGTCGTCATAGTCATGCTT +
Preference number: 4 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGETLLLR*VVIVML
Trigger: AAGCATGACTATGACGACTCATCTGAGGAGCAGAGT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGCACAGCGGGTGACATaGTGGTATACGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDAQRVT*WYTTGC
Trigger: ACAGCCAGTCGTATACCATCATGTCACCCGCTGTGC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCTGGCGGCTCGGGGATaGCATACTTTTCTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDLAARG*HTFLCV
Trigger: AACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCAGAGGCTGTGGATATaGCGCCGTACTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLQRLWI*RRTSSS
Trigger: AGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGTATACGACTGGCTGTTaGCAGCAGTGCCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLYTTGC*QQCPGY
Trigger: GTAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATA...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWSGDPC*CAVSRL
Trigger: TAGCCGAGAGACAGCACACCAGCATGGATCTCCCGA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGTTGGGCGGTCGTCACTaGCCAATTTCGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLLGGRH*PISGDP
Trigger: TGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAA...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCAGTCTACAGAGGCTGTaGATATGCCGCCGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPSLQRL*ICRRTS
Trigger: GGAAGTACGGCGGCATATCCACAGCCTCTGTAGACT...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACT +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLRHSHA*PPGCHT
Trigger: AGTATGGCAGCCAGGAGGGCAAGCATGACTATGACG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDRHSHA*PPGCHT
Trigger: AGTATGGCAGCCAGGAGGGCAAGCATGACTATGACG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDRFSWV*LSFMTR
Trigger: GCGCGTCATAAAGGACAAGCAGACCCAACTGAACCG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWISGDP*WCAVSR
Trigger: CCGAGAGACAGCACACCAGCATGGATCTCCCGAAAT...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR GCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTGCCATACTTTTCTCTaGGTTCAGCTGCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDCHTFL*VQLHGP
Trigger: GGGACCGTGCAGCTGAACGCAGAGAAAAGTATGGCA...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPKPRFS*VCLSFM
Trigger: CATAAAGGACAAGCAGACCCAACTGAACCGCGGCTT...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGGATGGGTAGGGCTCTaGAGCTCAGATTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWGWVGL*SSDLST
Trigger: TGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCCTTCTTCTCGAGGATaGCATAGCCAGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWPSSRG*HSQHLQ
Trigger: CTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGTCTACAGAGGCTGTaGATATGCCGCCGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSLQRL*ICRRTS
Trigger: GGAAGTACGGCGGCATATCCACAGCCTCTGTAGACT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGTCACCACCTCAATTTaGTTTGGTCAAGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPVTTSI*FGQALS
Trigger: AGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGAC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLKPRFS*VCLSFM
Trigger: CATAAAGGACAAGCAGACCCAACTGAACCGCGGCTT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGAGTAATACTGGGAGTTaGGGTCATAGTAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLSNTGS*GHSRGR
Trigger: CCGGCCTCTACTATGACCCCAACTCCCAGTATTACT...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATACTCTGCTCCTCAGATaGGTCGTCATAGTCATGCTT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDTLLLR*VVIVML
Trigger: AAGCATGACTATGACGACTCATCTGAGGAGCAGAGT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGTCACCACCTCAATTTaGTTTGGTCAAGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWVTTSI*FGQALS
Trigger: AGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGAC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGTCACCACCTCAATTTaGTTTGGTCAAGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDVTTSI*FGQALS
Trigger: AGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGAC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CCA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGAGCGTTCCATGTCCTTaGCAATCTGTTGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWSVPCP*QSVELS
Trigger: AGACAGCTCAACAGATTGCCAAGGACATGGAACGCT...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR TCA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTACAAAACAGGACGTaGTCCCAGCCCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDLQNRT*SQPNFP
Trigger: TGGAAAATTGGGCTGGGATCACGTCCTGTTTTGTAA...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp AGCAGGCCCTGGCTCAGCTCCCGGCCACCCAGTGGCAGTGTCTGCTaGTCCAGCCTCGTGCCGAGGGGCAGCTTCTGCTCTGCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SRPWLSSRPPSGSVC*SSLVPRGSFCSASD
Trigger: GTCAGAGGCAGAGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAGCTGAGCCAGGGCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCCGAACCTCCCGTGCTaGCACGCCGTGCGACTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLPNLPC*HAVRLQ
Trigger: CTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGG...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp TCAGCTCCCGGCCACCCAGTGGCAGTGTCTGCTGATCCAGCCTCGTaGCGAGGGGCAGCTTCTGCTCTGCCTCTGACTTGGGCACGCCAC +
Preference number: 5 (lower is better)
Translates to: SAPGHPVAVSADPAS*RGAASALPLTWARH
Trigger: GTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAGCTGCCCCTCGGCACGAGGCTGGATCAGCAGACACTGCCACTGGGTGGCCGGGAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp GGAGGGGAGAAGCGCCAAGCGCGCTGCCCTCCCAGGGAAACTCACTaGCGCCTACTCCCAGCCGGCCACAGTCACCAGCTCAAAATGGCG +
Preference number: 5 (lower is better)
Translates to: GGEKRQARCPPRETH*RLLPAGHSHQLKMA
Trigger: CGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTTCTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377604.8
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCCGAACCTCCCGTGCTaGCACGCCGTGCGACTGCAG +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPPNLPC*HAVRLQ
Trigger: CTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTGTCCTCGCGGAGGGCTaGGGCGGTCGTCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLVLAEG*GGRHWP
Trigger: TGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGAC...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPPYFLL*GSGGSG
Trigger: CCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCACAATGCCCTGCTTCTaGCGGCCCAGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPTMPCF*RPRPLP
Trigger: GGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTGT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTACAATGCCCTGCTTCTaGCGGCCCAGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPTMPCF*RPRPLP
Trigger: GGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTGT...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp TCACTTCCCAGCCACCCCCGCTGCTGCTACCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGGACTCTCCGCCCCCACGACCAGCGT +
Preference number: 5 (lower is better)
Translates to: SLPSHPRCCYHDLPA*VMLPAGTLRPHDQR
Trigger: ACGCTGGTCGTGGGGGCGGAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329236.8
CDS CCA 90 bp CATCCTGTTGGTAGTAGCTGTAGTCGACCGGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCACCTTGGGAGGCCTGTGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: HPVGSSCSRPAAPRR*PRYPPHLGRPVRWP
Trigger: GGGCCATCTCACAGGCCTCCCAAGGTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGCCGGTCGACTACAGCTACTACCAACAGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCCGGATGAGCGCCTCTTaGCTGGGGAACTGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPRMSAS*LGNWRR
Trigger: CCGACGCCAGTTCCCCAGCAAAGAGGCGCTCATCCG...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGCCCCGCACCCGTGTTaGGGCCTCGATAGGCGTTAC +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSAPHPC*GLDRRY
Trigger: GTAACGCCTATCGAGGCCCAAACACGGGTGCGGGGC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGCCCCGCACCCGTGTTaGGGCCTCGATAGGCGTTAC +
Preference number: 5 (lower is better)
Translates to: VGWPTRARPRPSHPTLCPAPHPC*GLDRRY
Trigger: GTAACGCCTATCGAGGCCCAAACACGGGTGCGGGGC...AGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp CGACTGGCTGTTGGCAGCAGTGCCCTGGCTACTGCTCGCCTCGGCTaGTTGTTGGTAGATGCCAGGAGCAGCACCAGGCTGGGCGCGAGA +
Preference number: 5 (lower is better)
Translates to: RLAVGSSALATARLG*LLVDARSSTRLGAR
Trigger: TCTCGCGCCCAGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAACAGCCAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS CCA 90 bp CTCACTGCCGCCTACTCCCAGCCGGCCACAGTCACCAGCTCAAAATaGCGACGACGAGAAGGGAGTCGGCGCTCCGACCACCATCCACCT +
Preference number: 5 (lower is better)
Translates to: LTAAYSQPATVTSSK*RRREGSRRSDHHPP
Trigger: AGGTGGATGGTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377604.8
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCCTCCTCCTCCTCCCCTaGCTCGGTCCGATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSLLLLP*LGPIVL
Trigger: CAGGACTATCGGACCGAGCAAGGGGAGGAGGAGGAG...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CAA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCTCCTCCTCCTCCCCTaGCTCGGTCCGATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPLLLLP*LGPIVL
Trigger: CAGGACTATCGGACCGAGCAAGGGGAGGAGGAGGAG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGCCAGTGGGATCCCCTTaGGTTCCAGTGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLPVGSP*VPVMPG
Trigger: CCCTGGCATCACTGGAACCAAAGGGGATCCCACTGG...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp CAGCAGTGCCCTGGCTACTGCTCGCCTCGGCTGATTGTTGGTAGATaGCAGGAGCAGCACCAGGCTGGGCGCGAGAGAAAGCCTGCATCG +
Preference number: 5 (lower is better)
Translates to: QQCPGYCSPRLIVGR*QEQHQAGRERKPAS
Trigger: CGATGCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS CCA 90 bp CACGTCTTTCATACTCCATGTCCTGATAGGGCCTTCGGGGGCTGCTaGGGCCCCTCCTCAGCCGCTGGCTCCGTTTCACTTCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: HVFHTPCPDRAFGGC*GPSSAAGSVSLPSH
Trigger: GTGGCTGGGAAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCCCCGAAGGCCCTATCAGGACATGGAGTATGAAAGACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp TCACTTCCCAGCCACCCCCGCTGCTGCTACCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGGACTCTTCTCGGCCCGGGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: SLPSHPRCCYHDLPA*VMLPAGTLLGPGCQ
Trigger: TTGACAGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCTGGGAAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp CATCCTGTTGGTAGTAGCTGTAGTCGACCGGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCACCTTGGGAGGCCTTATTGCACAGCC +
Preference number: 5 (lower is better)
Translates to: HPVGSSCSRPAAPRR*PRYPPHLGRPYCTA
Trigger: GGCTGTGCAATAAGGCCTCCCAAGGTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGCCGGTCGACTACAGCTACTACCAACAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496012.6
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSWRSLS*APSPVT
Trigger: TGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTATGACGCGCACGTaGGAGGAGGACAGCACCGCG +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSFMTRT*EEDSTA
Trigger: CGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCCCAGTGGGATCCCCTTaGGTTCCAGTGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPPVGSP*VPVMPG
Trigger: CCCTGGCATCACTGGAACCAAAGGGGATCCCACTGG...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCATCCGACTGCCAATGTaGTCACTGCCCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSIRLPM*SLPSPS
Trigger: GGACGGGCTGGGCAGTGACAACATTGGCAGTCGGAT...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCATCCGACTGCCAATGTaGTCACTGCCCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPIRLPM*SLPSPS
Trigger: GGACGGGCTGGGCAGTGACAACATTGGCAGTCGGAT...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGCTCACTGGGCCTCGTaGAAGCGGGTCACCATTGTC +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSAHWAS*KRVTIV
Trigger: GACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp GTCCTTTATGACGCGCACGTTGGAGGAGGACAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGAATCCATGGTGCTGTGTGGGTTCAG +
Preference number: 5 (lower is better)
Translates to: VLYDAHVGGGQHRVG*QGPQDGIHGAVWVQ
Trigger: CTGAACCCACACAGCACCATGGATTCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS-3UTR CAA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTTTATGACGCGCACGTaGGAGGAGGACAGCACCGCG +
Preference number: 5 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPFMTRT*EEDSTA
Trigger: CGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTTTATGACGCGCACGTaGGAGGAGGACAGCACCGCG +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLFMTRT*EEDSTA
Trigger: CGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGTATACGACTGGCTGTaGGCAGCAGTGCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSVYDWL*AAVPWL
Trigger: TAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATAC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTCCTCGCGGAGGGCTaGGGCGGTCGTCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALVLAEG*GGRHWP
Trigger: TGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGAC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGGTCCTCGCGGAGGGCTaGGGCGGTCGTCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLVLAEG*GGRHWP
Trigger: TGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGAC...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTATCCGACTGCCAATGTaGTCACTGCCCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLIRLPM*SLPSPS
Trigger: GGACGGGCTGGGCAGTGACAACATTGGCAGTCGGAT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAATCCGACTGCCAATGTaGTCACTGCCCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGIRLPM*SLPSPS
Trigger: GGACGGGCTGGGCAGTGACAACATTGGCAGTCGGAT...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp ACATTGATGGTCTTGCCGTCGATAGTGAGTGGTGGGTGCAGGGCCTaGAGGATCTGCAGCAGCTGGGCTGCCTCCACGATGGTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: TLMVLPSIVSGGCRA*RICSSWAASTMVES
Trigger: GCTCTCCACCATCGTGGAGGCAGCCCAGCTGCTGCAGATCCTGCAGGCCCTGCACCCACCACTCACTATCGACGGCAAGACCATCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS GCA 90 bp GCGGAGGGCTTGGGCGGTCGTCACTGGCCAATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGGCTAGTGCTCCCTTCTTCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: AEGLGGRHWPISGDP*WCAVSRLVLPSSRG
Trigger: TCCTCGAGAAGAAGGGAGCACTAGCCGAGAGACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAAGCCCTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp GAAGATTTGTTCCGCATCAGCCGAACCTCCCGTGCTTGCACGCCGTaGGACTGCAGCTGGCCACGGATCTCCGCACTCTGCTCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: EDLFRISRTSRACTP*DCSWPRISALCSSD
Trigger: ATCTGAGGAGCAGAGTGCGGAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTGATGCGGAACAAATCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCACAGCCAGTCCTCATaGATCTTGGGCTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSHSQSS*ILGLGS
Trigger: TGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTG...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTTCAGTTGGGTCTGCTaGTCCTTTATGACGCGCACG +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLFSWVC*SFMTRT
Trigger: CGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAA...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGGTATACGACTGGCTGTaGGCAGCAGTGCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLVYDWL*AAVPWL
Trigger: TAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATAC...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTATACGACTGGCTGTaGGCAGCAGTGCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPVYDWL*AAVPWL
Trigger: TAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATAC...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCTCCTTCTTCTCTTaGCCCTCCTTCGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSFSFFS*PSFEGA
Trigger: GGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGAA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCTTCTCCTTCTTCTCTTaGCCCTCCTTCGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSFSFFS*PSFEGA
Trigger: GGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGAA...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGATCTCAAGGTTTTGCTaGTGGAGCCCTGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLISRFC*WSPESC
Trigger: GCAGCTCTCAGGGCTCCACAAGCAAAACCTTGAGAT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALPYFLL*GSGGSG
Trigger: CCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGACAATGCCCTGCTTCTaGCGGCCCAGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLTMPCF*RPRPLP
Trigger: GGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTGT...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp GCGCAAAATGATGGTCCGTGCCTTTGCAACTGCCGCTTCCCTCACTaGTTCCTCCAGGATCAACTCTGCTTGGCGGTCCAGGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: AQNDGPCLCNCRFPH*FLQDQLCLAVQVPA
Trigger: GGCTGGCACCTGGACCGCCAAGCAGAGTTGATCCTGGAGGAAGCAGTGAGGGAAGCGGCAGTTGCAAAGGCACGGACCATCATTTTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS CCA 90 bp GAGGGCTTGGGCGGTCGTCACTGGCCAATTTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTAGTGCTCCCTTCTTCTCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: EGLGGRHWPISGDPC*CAVSRLVLPSSRGW
Trigger: CCATCCTCGAGAAGAAGGGAGCACTAGCCGAGAGACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp CGCGTAGGGTGCCAGGGCCCCCAGGATGGAATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAATGATGGTCCGTGCCTTTGCAACTGC +
Preference number: 5 (lower is better)
Translates to: RVGCQGPQDGIHGAV*VQVAQNDGPCLCNC
Trigger: GCAGTTGCAAAGGCACGGACCATCATTTTGCGCAACCTGAACCCACACAGCACCATGGATTCCATCCTGGGGGCCCTGGCACCCTACGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS-3UTR CAA 90 bp CGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCTTCAGTTGGGTCTGCTaGTCCTTTATGACGCGCACG +
Preference number: 5 (lower is better)
Translates to: RQEQGPVPAIQHSVLPCPFSWVC*SFMTRT
Trigger: CGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAA...GGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTTCTCCTTCTTCTCTTaGCCCTCCTTCGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPFSFFS*PSFEGA
Trigger: GGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGAA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTCGGATGAGCGCCTCTTaGCTGGGGAACTGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALRMSAS*LGNWRR
Trigger: CCGACGCCAGTTCCCCAGCAAAGAGGCGCTCATCCG...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGTGGAGAAGTTGCTCTaGAAGCTGCTCACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGVEKLL*KLLTGP
Trigger: AGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCAC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTCCACCTCAATTTGATTaGGTCAAGCCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GEWAGRQEQGPVPAIQHSPPQFD*VKPSLA
Trigger: AGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGG...AGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp TGCTCCCTTCTTCTCGAGGATGGCATAGCCAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATCTCGCAGGGAGCTGATAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: CSLLLEDGIASICSG*LPPLVISQGADRLE
Trigger: TTCCAGCCTATCAGCTCCCTGCGAGATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp ATGGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGCACGTTGGAGGAGGACAGCACCGCG +
Preference number: 5 (lower is better)
Translates to: MVESWMKAKPRFSWV*LSFMTRTLEEDSTA
Trigger: CGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS GCA 90 bp TCCCTCACTGCTTCCTCCAGGATCAACTCTGCTTGGCGGTCCAGGTaGCAGCCTGGCTGCCTGTCTGCTGAGAACTGTCATTGGCGTTCT +
Preference number: 5 (lower is better)
Translates to: SLTASSRINSAWRSR*QPGCLSAENCHWRS
Trigger: AGAACGCCAATGACAGTTCTCAGCAGACAGGCAGCCAGGCTGGCACCTGGACCGCCAAGCAGAGTTGATCCTGGAGGAAGCAGTGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS CCA 90 bp TACAGAGGCTGTGGATATGCCGCCGTACTTCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATACTTTTCTCTGCGTTCAGCTGCACG +
Preference number: 5 (lower is better)
Translates to: YRGCGYAAVLPPLGL*RLGDAILFSAFSCT
Trigger: CGTGCAGCTGAACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp GCCTCGATGGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATGACGCGCACGTTGGAGGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: ASMVESWMKAKPRFS*VCLSFMTRTLEEDS
Trigger: GCTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478410.1
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTGGACGCCACACTTATaGCACAGCCAGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLWTPHL*HSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGAAAATGATGGTGTCATaGGCGTTCTCTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLKMMVS*AFSELG
Trigger: GCCAAGCTCAGAGAACGCCAATGACACCATCATTTT...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGTTCAGTTGGGTCTGCTaGTCCTTTATGACGCGCACG +
Preference number: 5 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLFSWVC*SFMTRT
Trigger: CGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAA...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTTCAGTTGGGTCTGCTaGTCCTTTATGACGCGCACG +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLFSWVC*SFMTRT
Trigger: CGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPKAAVQ*GLLVLY
Trigger: ATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTT...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTATGCGACTGCCTTCATaGGAGGCCATGTCCCTCTTA +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLMRLPS*EAMSLL
Trigger: TAAGAGGGACATGGCCTCCAATGAAGGCAGTCGCAT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCATAGCCCTCATCCTGTaGGTAGTAGCTGTAGTCGAC +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSIALIL*VVAVVD
Trigger: GTCGACTACAGCTACTACCAACAGGATGAGGGCTAT...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCATAGCCCTCATCCTGTaGGTAGTAGCTGTAGTCGAC +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSIALIL*VVAVVD
Trigger: GTCGACTACAGCTACTACCAACAGGATGAGGGCTAT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCGTCCTTGGCAATCTGTaGAGCTGTCTTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSVLGNL*SCLGLV
Trigger: CACAAGACCAAGACAGCTCAACAGATTGCCAAGGAC...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWPYFLL*GSGGSG
Trigger: CCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp CACGGATGTCATCCTCAGTGGCTGCCTGTGGCAGCATCCTCAGCATaGCGATGTTACTGGCCTTCTCCTCCTCCTCCTCATCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HGCHPQWLPVAASSA*RCYWPSPPPPHPPP
Trigger: AGGAGGAGGATGAGGAGGAGGAGGAGAAGGCCAGTAACATCGTCATGCTGAGGATGCTGCCACAGGCAGCCACTGAGGATGACATCCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS CCA 90 bp TCCACGATGGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATGACGCGCACGTTGGAGGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: STMVESWMKAKPRFS*VCLSFMTRTLEEDS
Trigger: GCTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS CCA 90 bp CGAAGTCTACAGAGGCTGTGGATATGCCGCCGTACTTCCTCCTCTTaGGCTCTGGCGGCTCGGGGATGCCATACTTTTCTCTGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: RSLQRLWICRRTSSS*ALAARGCHTFLCVQ
Trigger: CTGAACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTGTAGACTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCAAAATGATGGTGTCATaGGCGTTCTCTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSKMMVS*AFSELG
Trigger: GCCAAGCTCAGAGAACGCCAATGACACCATCATTTT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLKAAVQ*GLLVLY
Trigger: ATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTT...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGGAGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATA +
Preference number: 5 (lower is better)
Translates to: GSGLADKSKAPSQPSNTLLANST*MVLPSI
Trigger: TATCGACGGCAAGACCATCAATGTTGAGTTTGCCAA...CAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGATAGCCCTCATCCTGTaGGTAGTAGCTGTAGTCGAC +
Preference number: 5 (lower is better)
Translates to: WPTRARPRPSHPTLCPSLIALIL*VVAVVD
Trigger: GTCGACTACAGCTACTACCAACAGGATGAGGGCTAT...CAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCCAGTGGGATCCCCTTaGGTTCCAGTGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLPVGSP*VPVMPG
Trigger: CCCTGGCATCACTGGAACCAAAGGGGATCCCACTGG...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTTTCTTTTTGTTTGTaGAGACTGCGGGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: AGRQEQGPVPAIQHSVLPFSFCL*RLRAQR
Trigger: ACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAAA...GGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCGTCCCGGTACTTCATTaGCTCCATGTCATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSVPVLH*LHVILL
Trigger: GAGAAGAATGACATGGAGCAAATGAAGTACCGGGAC...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGCTCACTGGGCCTCGTaGAAGCGGGTCACCATTGTC +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALAHWAS*KRVTIV
Trigger: GACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCACCTCAATTTGATTaGGTCAAGCCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLPPQFD*VKPSLA
Trigger: AGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGG...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCAGTCACCACCTCAATTaGATTTGGTCAAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GWPTRARPRPSHPTLCPSSHHLN*IWSSPL
Trigger: GAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACT...GGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp TACCCTCCCCACCTTGGGAGGCCTTATTGCACAGCCAGTCCTCATTaGTCTTGGGCTTGGGGTCACTGTAGTGCATCGACACCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: YPPHLGRPYCTASPH*SWAWGHCSASTPSG
Trigger: GCCAGAAGGTGTCGATGCACTACAGTGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTGCAATAAGGCCTCCCAAGGTGGGGAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496012.6
CDS-3UTR CAA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPSTLMV*PSIVSG
Trigger: ACCACTCACTATCGACGGCAAGACCATCAATGTTGA...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AGTGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTCCCTCTTAGAACCCTaGGCAAACTCAACATTGATG +
Preference number: 5 (lower is better)
Translates to: SGLADKSKAPSQPSNTLSSLLEP*ANSTLM
Trigger: CATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGA...GGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTATACGACTGGCTGTaGGCAGCAGTGCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALVYDWL*AAVPWL
Trigger: TAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATAC...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATTTTCTTTTTGTTTGTaGAGACTGCGGGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGFSFCL*RLRAQR
Trigger: ACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAAA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCGGATGAGCGCCTCTTaGCTGGGGAACTGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGERMSAS*LGNWRR
Trigger: CCGACGCCAGTTCCCCAGCAAAGAGGCGCTCATCCG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGAGTCCCGGTACTTCATTaGCTCCATGTCATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGVPVLH*LHVILL
Trigger: GAGAAGAATGACATGGAGCAAATGAAGTACCGGGAC...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTAGTCACCACCTCAATTaGATTTGGTCAAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: LADKSKAPSQPSNTLSFPSHHLN*IWSSPL
Trigger: GAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACT...AGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp TTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTaGAGCTGCTCACTGGGCCTCGTTGAAGCGGGTCACCATTGTCTT +
Preference number: 5 (lower is better)
Translates to: FPAPGWTPNMWRSCS*SCSLGLVEAGHHCL
Trigger: AAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp GGATCTCCGCACTCTGCTCCTCAGATGAGTCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACTCGCGAGGATATGAACGGTAGTCCA +
Preference number: 5 (lower is better)
Translates to: GSPHSAPQMSRHSHA*PPGCHTREDMNGSP
Trigger: TGGACTACCGTTCATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGCATGACTATGACGACTCATCTGAGGAGCAGAGTGCGGAGATCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCCGAACCTCCCGTGCTaGCACGCCGTGCGACTGCAG +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPPNLPC*HAVRLQ
Trigger: CTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCACAGCCAGTCCTCATaGATCTTGGGCTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLHSQSS*ILGLGS
Trigger: TGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTG...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWWRSLS*APSPVT
Trigger: TGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCA...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TGGGCTGGCCGACAAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATA +
Preference number: 5 (lower is better)
Translates to: WAGRQEQGPVPAIQHSVLLANST*MVLPSI
Trigger: TATCGACGGCAAGACCATCAATGTTGAGTTTGCCAA...AAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTTGTCGGCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AAGAGCAAGGCCCCGTCCCAGCCATCCAACACTCTGTCCTTCCCTGCCCCAGGATCCCTCTTAGAACCCTaGGCAAACTCAACATTGATG +
Preference number: 5 (lower is better)
Translates to: KSKAPSQPSNTLSFPAPGSLLEP*ANSTLM
Trigger: CATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGA...TCCTGGGGCAGGGAAGGACAGAGTGTTGGATGGCTGGGACGGGGCCTTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCCAGTGGGATCCCCTTaGGTTCCAGTGATGCCAGGG +
Preference number: 5 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWPVGSP*VPVMPG
Trigger: CCCTGGCATCACTGGAACCAAAGGGGATCCCACTGG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTTCTCCTTCTTCTCTTaGCCCTCCTTCGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLFSFFS*PSFEGA
Trigger: GGCACCCTCGAAGGAGGGCAAAGAGAAGAAGGAGAA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPPYFLL*GSGGSG
Trigger: CCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 90 bp TCTGCTCCTCAGATGAGTCGTCATAGTCATGCTTGCCCTCCTGGCTaGCATACTCGCGAGGATATGAACGGTAGTCCATGTCCCGGTAGT +
Preference number: 5 (lower is better)
Translates to: SAPQMSRHSHACPPG*HTREDMNGSPCPGS
Trigger: ACTACCGGGACATGGACTACCGTTCATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGCATGACTATGACGACTCATCTGAGGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp GATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGCTCACTaGGCCTCGTTGAAGCGGGTCACCATTGTCTTGTGCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DGHPTCGEVALEAAH*ASLKRVTIVLCSVS
Trigger: GGAGACACTGCACAAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTTGGACGCCACACTTATaGCACAGCCAGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALWTPHL*HSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCA...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTATGCGACTGCCTTCATaGGAGGCCATGTCCCTCTTA +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALMRLPS*EAMSLL
Trigger: TAAGAGGGACATGGCCTCCAATGAAGGCAGTCGCAT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTATCTCAAGGTTTTGCTaGTGGAGCCCTGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALISRFC*WSPESC
Trigger: GCAGCTCTCAGGGCTCCACAAGCAAAACCTTGAGAT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATACAATGCCCTGCTTCTaGCGGCCCAGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDTMPCF*RPRPLP
Trigger: GGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTGT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSWRSLS*APSPVT
Trigger: TGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLKAAVQ*GLLVLY
Trigger: ATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTT...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCCCCGCACCCGTGTTaGGGCCTCGATAGGCGTTAC +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLAPHPC*GLDRRY
Trigger: GTAACGCCTATCGAGGCCCAAACACGGGTGCGGGGC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGGCCCCGCACCCGTGTTaGGGCCTCGATAGGCGTTAC +
Preference number: 5 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWAPHPC*GLDRRY
Trigger: GTAACGCCTATCGAGGCCCAAACACGGGTGCGGGGC...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 90 bp CAACATGTGGAGAAGTTGCTCTTGAAGCTGCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCTTGTGCAGTGTCTCCTTGTAGGACT +
Preference number: 5 (lower is better)
Translates to: QHVEKLLLKLLTGPR*SGSPLSCAVSPCRT
Trigger: AGTCCTACAAGGAGACACTGCACAAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCACATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 90 bp TTGGGCACGCCACATTTGAAGCACTTCTCTCGGCGTTTGAAGTTCTaGACGCCACACTTATTGCACAGCCAGTCCTCATTGATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGTPHLKHFSRRLKF*TPHLLHSQSSLILG
Trigger: GCCCAAGATCAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGGCGTGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPWRSLS*APSPVT
Trigger: TGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCA...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTAAAATGATGGTGTCATaGGCGTTCTCTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALKMMVS*AFSELG
Trigger: GCCAAGCTCAGAGAACGCCAATGACACCATCATTTT...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGAAGCTGTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: LPCPRMDTQHVEKLLLKLSTLMV*PSIVSG
Trigger: ACCACTCACTATCGACGGCAAGACCATCAATGTTGA...CAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp TCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTGTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: SVLPCPRMDTQHVEKLLLSTLMV*PSIVSG
Trigger: ACCACTCACTATCGACGGCAAGACCATCAATGTTGA...CAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGCTCACTGGGCCTCGTaGAAGCGGGTCACCATTGTC +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPAHWAS*KRVTIV
Trigger: GACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGACGCCACACTTATaGCACAGCCAGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEWTPHL*HSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCA...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCTGTGTGGGTTCAGGTaGCGCAAAATGATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWLCGFR*RKMMVS
Trigger: TGACACCATCATTTTGCGCAACCTGAACCCACACAG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTTTATGACGCGCACGTaGGAGGAGGACAGCACCGCG +
Preference number: 5 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWFMTRT*EEDSTA
Trigger: CGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAA...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CTCTGTCCTTCCCTGCCCCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATA +
Preference number: 5 (lower is better)
Translates to: LCPSLPQDGHPTCGEVALLANST*MVLPSI
Trigger: TATCGACGGCAAGACCATCAATGTTGAGTTTGCCAA...AAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGGGGCAGGGAAGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCTCACTGGGCCTCGTaGAAGCGGGTCACCATTGTC +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLAHWAS*KRVTIV
Trigger: GACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGTGGAGAAGTTGCTCTaGAAGCTGCTCACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSVEKLL*KLLTGP
Trigger: AGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCAC...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTGGCCACCTCAATTTGATTaGGTCAAGCCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QKSPPQFDLVKPSLAGEWPPQFD*VKPSLA
Trigger: AGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGG...CCACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCCACAGCCAGTCCTCATaGATCTTGGGCTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPHSQSS*ILGLGS
Trigger: TGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTG...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGCTGTGTGGGTTCAGGTaGCGCAAAATGATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGELCGFR*RKMMVS
Trigger: TGACACCATCATTTTGCGCAACCTGAACCCACACAG...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEKAAVQ*GLLVLY
Trigger: ATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTT...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTATCTCAAGGTTTTGCTaGTGGAGCCCTGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSISRFC*WSPESC
Trigger: GCAGCTCTCAGGGCTCCACAAGCAAAACCTTGAGAT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCACAGCCAGTCCTCATaGATCTTGGGCTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDHSQSS*ILGLGS
Trigger: TGACCCCAAGCCCAAGATCAATGAGGACTGGCTGTG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTGGACGCCACACTTATaGCACAGCCAGTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPWTPHL*HSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCA...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTATAGCCCTCATCCTGTaGGTAGTAGCTGTAGTCGAC +
Preference number: 5 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSIALIL*VVAVVD
Trigger: GTCGACTACAGCTACTACCAACAGGATGAGGGCTAT...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTTTCTTTTTGTTTGTaGAGACTGCGGGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: QQKSPPQFDLVKPSLAGEFSFCL*RLRAQR
Trigger: ACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAAA...CTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTGGAGAAGTTGCTCTaGAAGCTGCTCACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLVEKLL*KLLTGP
Trigger: AGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCAC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGTCCTTGGCAATCTGTaGAGCTGTCTTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPVLGNL*SCLGLV
Trigger: CACAAGACCAAGACAGCTCAACAGATTGCCAAGGAC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATATCTCAAGGTTTTGCTaGTGGAGCCCTGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDISRFC*WSPESC
Trigger: GCAGCTCTCAGGGCTCCACAAGCAAAACCTTGAGAT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCAAAATGATGGTGTCATaGGCGTTCTCTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPKMMVS*AFSELG
Trigger: GCCAAGCTCAGAGAACGCCAATGACACCATCATTTT...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGCTGTGTGGGTTCAGGTaGCGCAAAATGATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: DVIPAQFSNKSHHLNLIWLCGFR*RKMMVS
Trigger: TGACACCATCATTTTGCGCAACCTGAACCCACACAG...CCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATCTGTGTGGGTTCAGGTaGCGCAAAATGATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDLCGFR*RKMMVS
Trigger: TGACACCATCATTTTGCGCAACCTGAACCCACACAG...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp AACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCTCTCTGGCTGGGGAGTTCCCTCTTAGAACCCTaGGCAAACTCAACATTGATG +
Preference number: 5 (lower is better)
Translates to: NKSHHLNLIWSSPLWLGSSLLEP*ANSTLM
Trigger: CATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGA...ACTCCCCAGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATGTCCTTGGCAATCTGTaGAGCTGTCTTGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDVLGNL*SCLGLV
Trigger: CACAAGACCAAGACAGCTCAACAGATTGCCAAGGAC...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCGTCCCGGTACTTCATTaGCTCCATGTCATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPVPVLH*LHVILL
Trigger: GAGAAGAATGACATGGAGCAAATGAAGTACCGGGAC...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGCCACCTCAATTTGATTaGGTCAAGCCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLPPQFD*VKPSLA
Trigger: AGCCAGAGAGGGCTTGACCAAATCAAATTGAGGTGG...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp CCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCAAGCCCAGTCACCACCTCAATTaGATTTGGTCAAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PSPIFQQKSPPQFDLVKPSHHLN*IWSSPL
Trigger: GAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACT...GGGCTTGACCAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDSTLMV*PSIVSG
Trigger: ACCACTCACTATCGACGGCAAGACCATCAATGTTGA...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTTTCTTTTTGTTTGTaGAGACTGCGGGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDFSFCL*RLRAQR
Trigger: ACGCTGGGCCCGCAGTCTCAACAAACAAAAAGAAAA...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGGTCCCGGTACTTCATTaGCTCCATGTCATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLVPVLH*LHVILL
Trigger: GAGAAGAATGACATGGAGCAAATGAAGTACCGGGAC...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp ACAGGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATAGTCACCACCTCAATTaGATTTGGTCAAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: TGRDPSPIFQQKSPPQFDSHHLN*IWSSPL
Trigger: GAGAGGGCTTGACCAAATCAAATTGAGGTGGTGACT...ATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS-3UTR CAA 90 bp GGACGTGATCCCAGCCCAATTTTCCAACAAAAGTCACCACCTCAATTTGATTTGTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATA +
Preference number: 5 (lower is better)
Translates to: GRDPSPIFQQKSPPQFDLLANST*MVLPSI
Trigger: TATCGACGGCAAGACCATCAATGTTGAGTTTGCCAA...CAAATCAAATTGAGGTGGTGACTTTTGTTGGAAAATTGGGCTGGGATCACGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GTCCTGGTCCCGATAGTCGCCGTCTCGGGGGAAGCCTaGCGGGCCGGTGGGGCTGTGCCTGTGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: VLVPIVAVSGEA*RAGGAVPVPPP
Trigger: CGGCGGCGGCACAGGCACAGCCCCACCGGCCCGCCAGGCTTCCCCCGAGACGGCGACTATCGGGACCAGGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS GCA 72 bp AAGCGCCAAGCGCGCTGCCCTCCCAGGGAAACTCACTaGCGCCTACTCCCAGCCGGCCACAGTCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: KRQARCPPRETH*RLLPAGHSHQL
Trigger: GAGCTGGTGACTGTGGCCGGCTGGGAGTAGGCGGCAGTGAGTTTCCCTGGGAGGGCAGCGCGCTTGGCGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377604.8
CDS CCA 72 bp GGTAGTAGCTGTAGTCGACCGGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCACCTTGGGAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: GSSCSRPAAPRR*PRYPPHLGRPV
Trigger: CACAGGCCTCCCAAGGTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGCCGGTCGACTACAGCTACTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS GCA 72 bp GACGCGCACGTTGGAGGAGGACAGCACCGCGTAGGGTaGCAGGGCCCCCAGGATGGAATCCATGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: DAHVGGGQHRVG*QGPQDGIHGAV
Trigger: CACAGCACCATGGATTCCATCCTGGGGGCCCTGGCACCCTACGCGGTGCTGTCCTCCTCCAACGTGCGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS GCA 72 bp CCAGGAGCAGCACCAGGCTGGGCGCGAGAGAAAGCCTaGATCGACACAGAGTCGGCCCCAGGCTCTAGGGAG +
Preference number: 6 (lower is better)
Translates to: PGAAPGWAREKA*IDTESAPGSRE
Trigger: CTCCCTAGAGCCTGGGGCCGACTCTGTGTCGATGCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS TCA 72 bp ACCCCCGCTGCTGCTACCATGATCTGCCAGCCTGGGTaGTGCTTCCTGCAGGGACTCTTCTCGGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: TPAAATMICQPG*CFLQGLFSARA
Trigger: AGCCCGGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp ATCAGCCGAACCTCCCGTGCTTGCACGCCGTGCGACTaGAGCTGGCCACGGATCTCCGCACTCTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ISRTSRACTPCD*SWPRISALCSS
Trigger: TGAGGAGCAGAGTGCGGAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS CCA 72 bp AGCCACCCCCGCTGCTGCTACCATGATCTGCCAGCCTaGGTGATGCTTCCTGCAGGGACTCTTCTCGGCCCG +
Preference number: 6 (lower is better)
Translates to: SHPRCCYHDLPA*VMLPAGTLLGP
Trigger: CGGGCCGAGAAGAGTCCCTGCAGGAAGCATCACCCAGGCTGGCAGATCATGGTAGCAGCAGCGGGGGTGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GCCTACTCCCAGCCGGCCACAGTCACCAGCTCAAAATaGCGACGACGAGAAGGGAGTCGGCGCTCCGACCAC +
Preference number: 6 (lower is better)
Translates to: AYSQPATVTSSK*RRREGSRRSDH
Trigger: GTGGTCGGAGCGCCGACTCCCTTCTCGTCGTCGCCATTTTGAGCTGGTGACTGTGGCCGGCTGGGAGTAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377604.8
CDS CCA 72 bp GGTAGTAGCTGTAGTCGACCGGCGGCTCCTCGGAGGTaGCCCAGGTACCCTCCCCACCTTGGGAGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: GSSCSRPAAPRR*PRYPPHLGRPY
Trigger: ATAAGGCCTCCCAAGGTGGGGAGGGTACCTGGGCCACCTCCGAGGAGCCGCCGGTCGACTACAGCTACTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496012.6
CDS CAA 72 bp AGGGAGGCCTCGGGACCTGCTCCAGTGGGATCCCCTTaGGTTCCAGTGATGCCAGGGCCCTTGGTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: REASGPAPVGSP*VPVMPGPLVPL
Trigger: CAAGGGCACCAAGGGCCCTGGCATCACTGGAACCAAAGGGGATCCCACTGGAGCAGGTCCCGAGGCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000496012.6
ENST00000628161.2
CDS CAA 90 bp CTTCTCCTCCTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCCCTaGCTCGGTCCGATAGTCCTGGTCCCGATAGTCGCCGTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLILLLLLLLP*LGPIVLVPIVAVSG
Trigger: CCCCGAGACGGCGACTATCGGGACCAGGACTATCGGACCGAGCAAGGGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS GCA 72 bp GTCTTGCCGTCGATAGTGAGTGGTGGGTGCAGGGCCTaGAGGATCTGCAGCAGCTGGGCTGCCTCGATGGTG +
Preference number: 6 (lower is better)
Translates to: VLPSIVSGGCRA*RICSSWAASMV
Trigger: CACCATCGAGGCAGCCCAGCTGCTGCAGATCCTGCAGGCCCTGCACCCACCACTCACTATCGACGGCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478410.1
ENST00000628161.2
CDS CCA 72 bp CATACTCCATGTCCTGATAGGGCCTTCGGGGGCTGCTaGGGCCCCTCCTCAGCCGCTGGCTCCGTTTCACTT +
Preference number: 6 (lower is better)
Translates to: HTPCPDRAFGGC*GPSSAAGSVSL
Trigger: AAGTGAAACGGAGCCAGCGGCTGAGGAGGGGCCCCAGCAGCCCCCGAAGGCCCTATCAGGACATGGAGTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp CCACCAGTCCTCGCGGAGGGCTTGGGCGGTCGTCACTaGCCAATTTCGGGAGATCCATGCTGGTGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: PPVLAEGLGGRH*PISGDPCWCAV
Trigger: GACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAAGCCCTCCGCGAGGACTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp CTCCTCCTCATCCTCCTCCTCCTCCTCCTCCTCCCCTaGCTCGGTCCGATAGTCCTGGTCCCGATAGTCGCC +
Preference number: 6 (lower is better)
Translates to: LLLILLLLLLLP*LGPIVLVPIVA
Trigger: GGCGACTATCGGGACCAGGACTATCGGACCGAGCAAGGGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS CAA 90 bp CCTGGCTGCCTGTCTGCTGAGAACTGTCATTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACAGGGCTTGGGAGGCCAGGACTCCCT +
Preference number: 6 (lower is better)
Translates to: PGCLSAENCHWRSLS*APSPVTGLGRPGLP
Trigger: AGGGAGTCCTGGCCTCCCAAGCCCTGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCAATGACAGTTCTCAGCAGACAGGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS TCA 72 bp GTTGGCAGCAGTGCCCTGGCTACTGCTCGCCTCGGCTaGTTGTTGGTAGATGCCAGGAGCAGCACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VGSSALATARLG*LLVDARSSTRL
Trigger: CAGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS GCA 72 bp CCTGGCTACTGCTCGCCTCGGCTGATTGTTGGTAGATaGCAGGAGCAGCACCAGGCTGGGCGCGAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: PGYCSPRLIVGR*QEQHQAGRERK
Trigger: CTTTCTCTCGCGCCCAGCCTGGTGCTGCTCCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGTAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS GCA 72 bp ACCCGTGTTTGGGCCTCGATAGGCGTTACAATGCCCTaGTTCTTGCGGCCCAGGCCGCTGCCCTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: TRVWASIGVTMP*FLRPRPLPSFQ
Trigger: CTGGAAAGAGGGCAGCGGCCTGGGCCGCAAGAAGCAGGGCATTGTAACGCCTATCGAGGCCCAAACACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp GAAGATTTGTTCCGCATCAGCCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGCTGGCCACGGATCTCC +
Preference number: 6 (lower is better)
Translates to: EDLFRISRTSRA*TPCDCSWPRIS
Trigger: GGAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTGATGCGGAACAAATCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS CCA 72 bp TGCAGCAGCTGGGCTGCCTCCACGATGGTGGAGAGCTaGATGAAGGCAAAGCCGCGGTTCAGTTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: CSSWAASTMVES*MKAKPRFSWVC
Trigger: GCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGTGGAGGCAGCCCAGCTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS TCA 72 bp GCAGCTGGGCTGCCTCCACGATGGTGGAGAGCTGGATaGAGGCAAAGCCGCGGTTCAGTTGGGTCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: AAGLPPRWWRAG*RQSRGSVGSAC
Trigger: ACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGTGGAGGCAGCCCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS TCA 72 bp CAGCTGGCCACGGATCTCCGCACTCTGCTCCTCAGATaGGTCGTCATAGTCATGCTTGCCCTCCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: QLATDLRTLLLR*VVIVMLALLAA
Trigger: GGCAGCCAGGAGGGCAAGCATGACTATGACGACTCATCTGAGGAGCAGAGTGCGGAGATCCGTGGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345781.10
ENST00000628161.2
CDS GCA 72 bp GAAGATTTGTTCCGCATCAGCCGAACCTCCCGTGCTTaGACGCCGTGCGACTGCAGCTGGCCACGGATGTCA +
Preference number: 6 (lower is better)
Translates to: EDLFRISRTSRA*TPCDCSWPRMS
Trigger: TGACATCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTGATGCGGAACAAATCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329236.8
ENST00000377604.8
CDS GCA 72 bp CCAATGTTGTCACTGCCCAGCCCGTCCCGAGTAGGCTaGTCGAAGTCTACAGAGGCTGTGGATATGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PMLSLPSPSRVG*SKSTEAVDMPP
Trigger: CGGCGGCATATCCACAGCCTCTGTAGACTTCGAGCAGCCTACTCGGGACGGGCTGGGCAGTGACAACATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GTGGGGCTGGTAGCCGGTGGGAGAGCAGAACTAGGATaGGTAGGGCTCTGGAGCTCAGATTTGAGCACAGCG +
Preference number: 6 (lower is better)
Translates to: VGLVAGGRAELG*VGLWSSDLSTA
Trigger: CGCTGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCCTAGTTCTGCTCTCCCACCGGCTACCAGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp CCTTCTTCTCGAGGATGGCATAGCCAGCATCTGCAGTaGCTGACTCCCGCCTCTCGTCATCTCGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: PSSRGWHSQHLQ*LTPASRHLAGS
Trigger: GCTCCCTGCGAGATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GCTGTCTCTCGGCTAGTGCTCCCTTCTTCTCGAGGATaGCATAGCCAGCATCTGCAGTGGCTGACTCCCGCC +
Preference number: 6 (lower is better)
Translates to: AVSRLVLPSSRG*HSQHLQWLTPA
Trigger: GGCGGGAGTCAGCCACTGCAGATGCTGGCTATGCCATCCTCGAGAAGAAGGGAGCACTAGCCGAGAGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp CTCGTGCCGAGGGGCAGCTTCTGCTCTGCCTCTGACTaGGGCACGCCACATTTGAAGCACTTCTCTCGGCGT +
Preference number: 6 (lower is better)
Translates to: LVPRGSFCSASD*GTPHLKHFSRR
Trigger: ACGCCGAGAGAAGTGCTTCAAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAGCTGCCCCTCGGCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp CTCTGTGCCCTGGCTGTTGCCATAGCCCTCATCCTGTaGGTAGTAGCTGTAGTCGACCGGCGGCTCCTCGGA +
Preference number: 6 (lower is better)
Translates to: LCALAVAIALIL*VVAVVDRRLLG
Trigger: TCCGAGGAGCCGCCGGTCGACTACAGCTACTACCAACAGGATGAGGGCTATGGCAACAGCCAGGGCACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000496012.6
ENST00000628161.2
CDS TCA 72 bp CAAAGCCGCGGTTCAGTTGGGTCTGCTTGTCCTTTATaGCGCGCACGTTGGAGGAGGACAGCACCGCGTAGG +
Preference number: 6 (lower is better)
Translates to: QSRGSVGSACPL*RARWRRTAPRR
Trigger: CCTACGCGGTGCTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS TCA 72 bp CTTCTCGAGGATGGCATAGCCAGCATCTGCAGTGGCTaGCTCCCGCCTCTCGTCATCTCGCAGGGAGCTGAT +
Preference number: 6 (lower is better)
Translates to: LLEDGIASICSG*LPPLVISQGAD
Trigger: ATCAGCTCCCTGCGAGATGACGAGAGGCGGGAGTCAGCCACTGCAGATGCTGGCTATGCCATCCTCGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp GCTTCCTCCAGGATCAACTCTGCTTGGCGGTCCAGGTaGCAGCCTGGCTGCCTGTCTGCTGAGAACTGTCAT +
Preference number: 6 (lower is better)
Translates to: ASSRINSAWRSR*QPGCLSAENCH
Trigger: ATGACAGTTCTCAGCAGACAGGCAGCCAGGCTGGCACCTGGACCGCCAAGCAGAGTTGATCCTGGAGGAAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS CCA 72 bp CAGAGGCTGTGGATATGCCGCCGTACTTCCTCCTCTTaGGCTCTGGCGGCTCGGGGATGCCATACTTTTCTC +
Preference number: 6 (lower is better)
Translates to: QRLWICRRTSSS*ALAARGCHTFL
Trigger: GAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp CTGTCTGCTGAGAACTGTCATTGGCGTTCTCTGAGCTaGGCTCCGAGCCCTGTGACAGGGCTTGGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LSAENCHWRSLS*APSPVTGLGRP
Trigger: TGGCCTCCCAAGCCCTGTCACAGGGCTCGGAGCCAAGCTCAGAGAACGCCAATGACAGTTCTCAGCAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS CAA 90 bp CTCCACGATGGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTATGACGCGCACGTTGGAGGAGGACAG +
Preference number: 6 (lower is better)
Translates to: LHDGGELDEGKAAVQ*GLLVLYDAHVGGGQ
Trigger: CTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
CDS CAA 90 bp TGCCTCGATGGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTATGACGCGCACGTTGGAGGAGGACAG +
Preference number: 6 (lower is better)
Translates to: CLDGGELDEGKAAVQ*GLLVLYDAHVGGGQ
Trigger: CTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACCATCGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478410.1
ENST00000628161.2
CDS GCA 72 bp TATACGACTGGCTGTTGGCAGCAGTGCCCTGGCTACTaGTCGCCTCGGCTGATTGTTGGTAGATGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: YTTGCWQQCPGY*SPRLIVGRCQE
Trigger: CTCCTGGCATCTACCAACAATCAGCCGAGGCGAGCAGTAGCCAGGGCACTGCTGCCAACAGCCAGTCGTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000496012.6
ENST00000628161.2
CDS GCA 72 bp TTGGGCGGTCGTCACTGGCCAATTTCGGGAGATCCATaGTGGTGTGCTGTCTCTCGGCTAGTGCTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LGGRHWPISGDP*WCAVSRLVLPS
Trigger: AGAAGGGAGCACTAGCCGAGAGACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGACCGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp TGGGCTCTGGCGGCTCGGGGATGCCATACTTTTCTCTaGGTTCAGCTGCACGGTCCCGGTACTTCATTTGCT +
Preference number: 6 (lower is better)
Translates to: WALAARGCHTFL*VQLHGPGTSFA
Trigger: AGCAAATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GGCGGTCGTCACTGGCCAATTTCGGGAGATCCATGCTaGTGTGCTGTCTCTCGGCTAGTGCTCCCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GGRHWPISGDPC*CAVSRLVLPSS
Trigger: AGAAGAAGGGAGCACTAGCCGAGAGACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp ATCTCAAGGTTTTGCTTGTGGAGCCCTGAGAGCTGCTaGTGCCGGATGAGCGCCTCTTTGCTGGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: ISRFCLWSPESC*CRMSASLLGNW
Trigger: CCAGTTCCCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGCAAAACCTTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp TGTGGATATGCCGCCGTACTTCCTCCTCTTGGGCTCTaGCGGCTCGGGGATGCCATACTTTTCTCTGCGTTC +
Preference number: 6 (lower is better)
Translates to: CGYAAVLPPLGL*RLGDAILFSAF
Trigger: GAACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp TGCCAGGGCCCCCAGGATGGAATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAATGATGGTCCGTGCCTT +
Preference number: 6 (lower is better)
Translates to: CQGPQDGIHGAV*VQVAQNDGPCL
Trigger: AAGGCACGGACCATCATTTTGCGCAACCTGAACCCACACAGCACCATGGATTCCATCCTGGGGGCCCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478410.1
CDS CAA 72 bp ACAGAGGCTGTGGATATGCCGCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGGATGCCATACTTTTCT +
Preference number: 6 (lower is better)
Translates to: TEAVDMPPYFLL*GSGGSGMPYFS
Trigger: AGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 90 bp CCGAGGGGCAGCTTCTGCTCTGCCTCTGACTTGGGCACGCCACATTaGAAGCACTTCTCTCGGCGTTTGAAGTTCTGGACGCCACACTTA +
Preference number: 6 (lower is better)
Translates to: PRGSFCSASDLGTPH*KHFSRRLKFWTPHL
Trigger: TAAGTGTGGCGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAGCTGCCCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 90 bp TCGAAGTCTACAGAGGCTGTGGATATGCCGCCGTACTTCCTCCTCTaGGGCTCTGGCGGCTCGGGGATGCCATACTTTTCTCTGCGTTCA +
Preference number: 6 (lower is better)
Translates to: SKSTEAVDMPPYFLL*GSGGSGMPYFSLRS
Trigger: TGAACGCAGAGAAAAGTATGGCATCCCCGAGCCGCCAGAGCCCAAGAGGAGGAAGTACGGCGGCATATCCACAGCCTCTGTAGACTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 72 bp CCAGGATGGACACCCAACATGTGGAGAAGTTGCTCTTaGAGCTGCTCACTGGGCCTCGTTGAAGCGGGTCAC +
Preference number: 6 (lower is better)
Translates to: PGWTPNMWRSCS*SCSLGLVEAGH
Trigger: GTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCACATGTTGGGTGTCCATCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp AGCTGGATGAAGGCAAAGCCGCGGTTCAGTTGGGTCTaGTTGTCCTTTATGACGCGCACGTTGGAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SWMKAKPRFSWV*LSFMTRTLEED
Trigger: GTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS GCA 72 bp TCGTCACTGGCCAATTTCGGGAGATCCATGCTGGTGTaGTGTCTCTCGGCTAGTGCTCCCTTCTTCTCGAGG +
Preference number: 6 (lower is better)
Translates to: SSLANFGRSMLV*CLSASAPFFSR
Trigger: CCTCGAGAAGAAGGGAGCACTAGCCGAGAGACAGCACACCAGCATGGATCTCCCGAAATTGGCCAGTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp TGCCAGGGCCCCCAGGATGGAATCCATGGTGCTGTGTaGGTTCAGGTTGCGCAAAATGATGGTGTCATTGGC +
Preference number: 6 (lower is better)
Translates to: CQGPQDGIHGAV*VQVAQNDGVIG
Trigger: GCCAATGACACCATCATTTTGCGCAACCTGAACCCACACAGCACCATGGATTCCATCCTGGGGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp GTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTTaGGTCTGCTTGTCCTTTATGACGCGCACGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VESWMKAKPRFS*VCLSFMTRTLE
Trigger: CTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 72 bp TGGATGAAGGCAAAGCCGCGGTTCAGTTGGGTCTGCTaGTCCTTTATGACGCGCACGTTGGAGGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: WMKAKPRFSWVC*SFMTRTLEEDS
Trigger: GCTGTCCTCCTCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 72 bp GGTGGAGAGCTGGATGAAGGCAAAGCCGCGGTTCAGTaGGGTCTGCTTGTCCTTTATGACGCGCACGTTGGA +
Preference number: 6 (lower is better)
Translates to: GGELDEGKAAVQ*GLLVLYDAHVG
Trigger: TCCAACGTGCGCGTCATAAAGGACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAGCTCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 72 bp CTGGCCACAGAGGCAGCACTGATGCGACTGCCTTCATaGGAGGCCATGTCCCTCTTAGAACCCTTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: LATEAALMRLPS*EAMSLLEPLAN
Trigger: GTTTGCCAAGGGTTCTAAGAGGGACATGGCCTCCAATGAAGGCAGTCGCATCAGTGCTGCCTCTGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 90 bp GCCATGTCCCTCTTAGAACCCTTGGCAAACTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGTGGGTGCAGGGCCTGCAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: AMSLLEPLANSTLMV*PSIVSGGCRACRIC
Trigger: GCAGATCCTGCAGGCCCTGCACCCACCACTCACTATCGACGGCAAGACCATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 90 bp GGTGGGAGAGCAGAACTAGGATGGGTAGGGCTCTGGAGCTCAGATTaGAGCACAGCGGGTGACATGATGGTATACGACTGGCTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: GGRAELGWVGLWSSD*STAGDMMVYDWLLA
Trigger: TGCCAACAGCCAGTCGTATACCATCATGTCACCCGCTGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCCTAGTTCTGCTCTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 72 bp GGTAGGGCTCTGGAGCTCAGATTTGAGCACAGCGGGTaGCATGATGGTATACGACTGGCTGTTGGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: GRALELRFEHSG*HDGIRLAVGSS
Trigger: ACTGCTGCCAACAGCCAGTCGTATACCATCATGTCACCCGCTGTGCTCAAATCTGAGCTCCAGAGCCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp GGAGAAGTTGCTCTTGAAGCTGCTCACTGGGCCTCGTaGAAGCGGGTCACCATTGTCTTGTGCAGTGTCTCC +
Preference number: 6 (lower is better)
Translates to: GEVALEAAHWAS*KRVTIVLCSVS
Trigger: GGAGACACTGCACAAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 90 bp TCATTGGAGGCCATGTCCCTCTTAGAACCCTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATAGTGAGTGGTGGGTGCAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SLEAMSLLEPLANST*MVLPSIVSGGCRAC
Trigger: GCAGGCCCTGCACCCACCACTCACTATCGACGGCAAGACCATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGACATGGCCTCCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS TCA 72 bp GCTTCTAGCTCGTTTTCTGACAAGTGGGCTCGCCGGTaGATCTCAAGGTTTTGCTTGTGGAGCCCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: ASSSFSDKWARR*ISRFCLWSPES
Trigger: GCTCTCAGGGCTCCACAAGCAAAACCTTGAGATTCACCGGCGAGCCCACTTGTCAGAAAACGAGCTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS TCA 72 bp GAGAAGTTGCTCTTGAAGCTGCTCACTGGGCCTCGTTaGAGCGGGTCACCATTGTCTTGTGCAGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: EKLLLKLLTGPR*SGSPLSCAVSP
Trigger: AGGAGACACTGCACAAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp CACTCTGCTCCTCAGATGAGTCGTCATAGTCATGCTTaGCCTCCTGGCTGCCATACTCGCGAGGATATGAAC +
Preference number: 6 (lower is better)
Translates to: HSAPQMSRHSHA*PPGCHTREDMN
Trigger: GTTCATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGCATGACTATGACGACTCATCTGAGGAGCAGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp CATGGGCATAGAGGGAAGACTCTGTGCCCTGGCTGTTaGCATAGCCCTCATCCTGTTGGTAGTAGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: HGHRGKTLCPGC*HSPHPVGSSCS
Trigger: ACTACAGCTACTACCAACAGGATGAGGGCTATGGCAACAGCCAGGGCACAGAGTCTTCCCTCTATGCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000496012.6
ENST00000628161.2
CDS GCA 72 bp CGGCTCGGGGATGCCATACTTTTCTCTGCGTTCAGCTaGACGGTCCCGGTACTTCATTTGCTCCATGTCATT +
Preference number: 6 (lower is better)
Translates to: RLGDAILFSAFS*TVPVLHLLHVI
Trigger: AATGACATGGAGCAAATGAAGTACCGGGACCGTGCAGCTGAACGCAGAGAAAAGTATGGCATCCCCGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CCA 72 bp CCAACATGTGGAGAAGTTGCTCTTGAAGCTGCTCACTaGGCCTCGTTGAAGCGGGTCACCATTGTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: PTCGEVALEAAH*ASLKRVTIVLC
Trigger: GCACAAGACAATGGTGACCCGCTTCAACGAGGCCCAGTGAGCAGCTTCAAGAGCAACTTCTCCACATGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp AGCTTCTGCTCTGCCTCTGACTTGGGCACGCCACATTaGAAGCACTTCTCTCGGCGTTTGAAGTTCTGGACG +
Preference number: 6 (lower is better)
Translates to: SFCSASDLGTPH*KHFSRRLKFWT
Trigger: CGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGGCGTGCCCAAGTCAGAGGCAGAGCAGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp CTCTTAGAACCCTTGGCAAACTCAACATTGATGGTCTaGCCGTCGATAGTGAGTGGTGGGTGCAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: LLEPLANSTLMV*PSIVSGGCRAC
Trigger: GCAGGCCCTGCACCCACCACTCACTATCGACGGCAAGACCATCAATGTTGAGTTTGCCAAGGGTTCTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CAA 72 bp GCAGAACTAGGATGGGTAGGGCTCTGGAGCTCAGATTaGAGCACAGCGGGTGACATGATGGTATACGACTGG +
Preference number: 6 (lower is better)
Translates to: AELGWVGLWSSD*STAGDMMVYDW
Trigger: CCAGTCGTATACCATCATGTCACCCGCTGTGCTCAAATCTGAGCTCCAGAGCCCTACCCATCCTAGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 90 bp GCCTCTGACTTGGGCACGCCACATTTGAAGCACTTCTCTCGGCGTTaGAAGTTCTGGACGCCACACTTATTGCACAGCCAGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: ASDLGTPHLKHFSRR*KFWTPHLLHSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGGCGTGCCCAAGTCAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS GCA 72 bp CAGATGAGTCGTCATAGTCATGCTTGCCCTCCTGGCTaGCATACTCGCGAGGATATGAACGGTAGTCCATGT +
Preference number: 6 (lower is better)
Translates to: QMSRHSHACPPG*HTREDMNGSPC
Trigger: ACATGGACTACCGTTCATATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGCATGACTATGACGACTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp TTCTCTCGGCGTTTGAAGTTCTGGACGCCACACTTATaGCACAGCCAGTCCTCATTGATCTTGGGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: FSRRLKFWTPHL*HSQSSLILGLG
Trigger: CCCCAAGCCCAAGATCAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCAGAACTTCAAACGCCGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2
CDS CAA 72 bp GCCATGTCCCTCTTAGAACCCTTGGCAAACTCAACATaGATGGTCTTGCCGTCGATAGTGAGTGGTGGGTGC +
Preference number: 6 (lower is better)
Translates to: AMSLLEPLANST*MVLPSIVSGGC
Trigger: GCACCCACCACTCACTATCGACGGCAAGACCATCAATGTTGAGTTTGCCAAGGGTTCTAAGAGGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000478410.1
ENST00000628161.2
CDS CCA 72 bp CCACATTTGAAGCACTTCTCTCGGCGTTTGAAGTTCTaGACGCCACACTTATTGCACAGCCAGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: PHLKHFSRRLKF*TPHLLHSQSSL
Trigger: CAATGAGGACTGGCTGTGCAATAAGTGTGGCGTCCAGAACTTCAAACGCCGAGAGAAGTGCTTCAAATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329236.8
ENST00000345781.10
ENST00000377604.8
ENST00000628161.2