RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBFOX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100320

Ensembl transcript IDs: ENST00000262829.11, ENST00000359369.8, ENST00000397303.6, ENST00000397305.3, ENST00000405409.6, ENST00000408983.2, ENST00000414461.6, ENST00000416721.6, ENST00000438146.7, ENST00000449924.6, ENST00000463509.1, ENST00000473487.6, ENST00000491982.1, ENST00000495377.6, ENST00000618140.3, ENST00000619768.4, ENST00000625456.2, ENST00000626107.2, ENST00000626165.1, ENST00000626598.2, ENST00000627612.2, ENST00000627872.2, ENST00000627946.2, ENST00000629663.1, ENST00000629809.1, ENST00000630250.2, ENST00000630774.1, ENST00000631365.2

Found 972 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTaGAGCCCTAGCTTACGCGTGTCAGCCCCAGGTTTGCTCCAGCTA +
Preference number: 1 (lower is better)
Translates to: QPVRDKYTPPALFSL*SPSLRVSAPGLLQL
Trigger: TAGCTGGAGCAAACCTGGGGCTGACACGCGTAAGCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp GTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGCCACAGGCTCAAGACTGTGGATAGA +
Preference number: 1 (lower is better)
Translates to: VQSGPGAQRGVFGGQ*EAQRDSHRLKTVDR
Trigger: TCTATCCACAGTCTTGAGCCTGTGGCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp CAGCCAGATGGCAACGGCAGTGACTCACTGCGCGACTCTTTCTGGTaGTATAGAAGACCCTTGCCATCGCAGACCCTCCTTCCAATATGG +
Preference number: 1 (lower is better)
Translates to: QPDGNGSDSLRDSFW*YRRPLPSQTLLPIW
Trigger: CCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GCCTTGTTCTCCTGCCAGAGGGAAGGGGGTTCATCATGCCCTTCTTaGATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: ALFSCQREGGSSCPS*ISLGLLPSLFDVSL
Trigger: GAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGGGCATGATGAACCCCCTTCCCTCTGGCAGGAGAACAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp GGTGCCAGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCTGTTTCAT +
Preference number: 1 (lower is better)
Translates to: GARDSITLTKPEGTR*LRTPRAYLERALFH
Trigger: ATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp AGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTaGGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTT +
Preference number: 1 (lower is better)
Translates to: STELAFGGLSQNQLN*DALKVPQAQDSASL
Trigger: AAGAGAGGCAGAATCTTGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp TGGAAAGCACAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGATTCTGCCT +
Preference number: 1 (lower is better)
Translates to: WKAQSLPLEASARTS*TEMHSRCLKLKILP
Trigger: AGGCAGAATCTTGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GCAGTGACTCACTGCGCGACTCTTTCTGGTGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCA +
Preference number: 1 (lower is better)
Translates to: AVTHCATLSGDIEDP*HRRPSFQYGRAAIS
Trigger: TGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTGAGTCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp ACCATCCCTGGAAATGCAGCAGAAACCACTGGAAAGCACAGAGCTTaGCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACT +
Preference number: 1 (lower is better)
Translates to: TIPGNAAETTGKHRA*LWRPQPEPAELRCT
Trigger: AGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GAAAAGGGAGCTGGAGGAAGCGGTGTTAAACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAAGCACAGAGCTTGCCTTTGGAGGCC +
Preference number: 1 (lower is better)
Translates to: EKGAGGSGVKHHPWK*SRNHWKAQSLPLEA
Trigger: GGCCTCCAAAGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAACACCGCTTCCTCCAGCTCCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp CCTTGGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGAT +
Preference number: 1 (lower is better)
Translates to: PWLALFSCQREGGSS*PSCISLGLLPSLFD
Trigger: ATCAAACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGGGCATGATGAACCCCCTTCCCTCTGGCAGGAGAACAAGGCCAACCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp CCTGGAAATGCAGCAGAAACCACTGGAAAGCACAGAGCTTGCCTTTaGAGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGT +
Preference number: 1 (lower is better)
Translates to: PGNAAETTGKHRACL*RPQPEPAELRCTQG
Trigger: ACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp CCCTTTCTCCTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTaGTTGGCCTTGTTCTCCTGCCAGAGGGAAGGGGGTTCATCATGC +
Preference number: 1 (lower is better)
Translates to: PFLLLKHLSAFQSVP*LALFSCQREGGSSC
Trigger: GCATGATGAACCCCCTTCCCTCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAAGCACTTAGATGTTTAAGGAGGAGAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp TTTCAGGCACAGCCTCTCTCCCAGTTACGAGGCGAGACAGGATTCTaGAGGGGGAAAGGATATGTATTCTACACAACAGGTCAACGCCCT +
Preference number: 1 (lower is better)
Translates to: FQAQPLSQLRGETGF*RGKGYVFYTTGQRP
Trigger: AGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTCCCCCTTCAGAATCCTGTCTCGCCTCGTAACTGGGAGAGAGGCTGTGCCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp CAGAAGCTCCATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGTACCAATGTGACTAGACCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: QKLHVSELLPLAAVP*VKGHPSTNVTRPGS
Trigger: GCTCCCTGGTCTAGTCACATTGGTACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAAAGGGAGTAATTCAGAGACATGGAGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp TACAGTTTCGGTAACATGGAAAAGAACTCAGCTACTACAGCCAACTaGAATACTTCAGGAACCCCCTCCATCCCTGGGCTCCTCACTCCT +
Preference number: 1 (lower is better)
Translates to: YSFGNMEKNSATTAN*NTSGTPSIPGLLTP
Trigger: AGGAGTGAGGAGCCCAGGGATGGAGGGGGTTCCTGAAGTATTGCAGTTGGCTGTAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp GGAGAAGAGGAGAGGTTCTGTGGCATTTTGAGCCTTGCAAAGATTTaGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGA +
Preference number: 1 (lower is better)
Translates to: GEEERFCGILSLAKI*TEKLRDSGRSACQG
Trigger: TCCCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCTCTCCTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp ATTCTTAACGAGAAGGGAAGGGAATTAGAGACTGTCACAAAGCCCTaGGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTGGGCAA +
Preference number: 1 (lower is better)
Translates to: ILNEKGRELETVTKP*DASLELAGKQDPGQ
Trigger: TTGCCCAGGGTCCTGTTTCCCTGCTAACTCCAGAGAAGCATCCCAGGGCTTTGTGACAGTCTCTAATTCCCTTCCCTTCTCGTTAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 90 bp TGCCTGCCCTTCCATGTCCTCATCACCAAAACTTCCAGGGACTACTaGCCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTAT +
Preference number: 1 (lower is better)
Translates to: CLPFHVLITKTSRDY*PRTWYSIFPQQILY
Trigger: ATAAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTTTGGTGATGAGGACATGGAAGGGCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GCTCTGGAAGATGAAAATTCCTATGGCTTTGGAGCAAGTACAAAGTaGCTCTGCCTGCCCTTCCATGTCCTCATCACCAAAACTTCCAGG +
Preference number: 1 (lower is better)
Translates to: ALEDENSYGFGASTK*LCLPFHVLITKTSR
Trigger: CCTGGAAGTTTTGGTGATGAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTTCATCTTCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp TTCTTAGAAAAGGGAGCTGGAGGAAGCGGTGTTAAACACCATCCCTaGAAATGCAGCAGAAACCACTGGAAAGCACAGAGCTTGCCTTTG +
Preference number: 1 (lower is better)
Translates to: FLEKGAGGSGVKHHP*KCSRNHWKAQSLPL
Trigger: CAAAGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAACACCGCTTCCTCCAGCTCCCTTTTCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp ACCCAGAGCCTACTTGGAAAGGGCCCTGTTTCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTGATCAGTAAAGCAAGTATGAAGGAA +
Preference number: 1 (lower is better)
Translates to: TQSLLGKGPVSCSSS*MAIAWLISKASMKE
Trigger: TTCCTTCATACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp ATGAAAATTCCTATGGCTTTGGAGCAAGTACAAAGTGCCTCTGCCTaGCCTTCCATGTCCTCATCACCAAAACTTCCAGGGACTACTGAC +
Preference number: 1 (lower is better)
Translates to: MKIPMALEQVQSASA*PSMSSSPKLPGTTD
Trigger: GTCAGTAGTCCCTGGAAGTTTTGGTGATGAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GAAGATGAAAATTCCTATGGCTTTGGAGCAAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTCATCACCAAAACTTCCAGGGACTAC +
Preference number: 1 (lower is better)
Translates to: EDENSYGFGASTKCL*LPFHVLITKTSRDY
Trigger: GTAGTCCCTGGAAGTTTTGGTGATGAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTTCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GATAACATAGAAAATTACAGCCAGATGGCAACGGCAGTGACTCACTaGGCGACTCTTTCTGGTGATATAGAAGACCCTTGCCATCGCAGA +
Preference number: 1 (lower is better)
Translates to: DNIENYSQMATAVTH*ATLSGDIEDPCHRR
Trigger: TCTGCGATGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCTGGCTGTAATTTTCTATGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp TCAAGGTGCCTCAAGCTCAAGATTCTGCCTCTCTTAAAAGGTCTGTaGGAGCCGCCTTCTCTACCTTTCCCATTATCCTTACCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: SRCLKLKILPLLKGL*EPPSLPFPLSLPLS
Trigger: AGAAAGAGGTAAGGATAATGGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTGAGCTTGAGGCACCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 90 bp GGAAAGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTaGCTGATCAGTAAAGCAAGTATGAAGGAAGTACATAGGAAAAGG +
Preference number: 1 (lower is better)
Translates to: GKGPVSCSSSWMAIA*LISKASMKEVHRKR
Trigger: CCTTTTCCTATGTACTTCCTTCATACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 90 bp GCCTGTCAAAGACCAGAAACTCAGAAGACTAGAAGAATATCCTGTTaGAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAG +
Preference number: 1 (lower is better)
Translates to: ACQRPETQKTRRISC*RKISSTSACPPVIQ
Trigger: CTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAGTTTCTGGTCTTTGACAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR TCA 90 bp CCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: PPVIQHQIHFGNSVC*FLIRCIYRLLMSLL
Trigger: AAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR CCA 90 bp TTAATTCTCCTGCTTTGTAAGCACAAATTCCTATCTATCAGCATGTaGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGA +
Preference number: 1 (lower is better)
Translates to: LILLLCKHKFLSISM*IPATANQNCLSKTR
Trigger: TCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACAAAGCAGGAGAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGTACTGCGCTAGAGGTTaGAAGCAGCGGAGAACTGGC +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRYCARG*KQRRTG
Trigger: GCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRNPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTCCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFAPEGTR*LRTPRA
Trigger: GGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGG...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAACTCATGTACCCCCTaGGAAACTGGTGTTGGTAAC +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRNSCTP*ETGVGN
Trigger: GTTACCAACACCAGTTTCCCAGGGGGTACATGAGTT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCTAAAAGGCAAGGCTTaGGTTTTGGCTGATGAGCAG +
Preference number: 2 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSLKGKA*VLADEQ
Trigger: CTGCTCATCAGCCAAAACTCAAGCCTTGCCTTTTAG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTC +
Preference number: 2 (lower is better)
Translates to: RPQPEPAELRCTQGASSSSTKCL*LPFHVL
Trigger: GAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACT...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGACTGTGAAATCCAGATaGTTGCAAGAGCCCCAATTC +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRTVKSR*LQEPQF
Trigger: GAATTGGGGCTCTTGCAAGCATCTGGATTTCACAGT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTG +
Preference number: 2 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSEGGSS*PSCISL
Trigger: CAAGGATATGCAAGAAGGGCATGATGAACCCCCTTC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGG +
Preference number: 2 (lower is better)
Translates to: RPQPEPAELRCTQGASSSTLLPI*EGSNLR
Trigger: CCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGT...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGTGGATGGCTATTGCCTaGCTGATCAGTAAAGCAAGT +
Preference number: 2 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRWMAIA*LISKAS
Trigger: ACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCA...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 90 bp TCCTCCCCAGAGTCAGTAATAATTGCATCGAGGCCTCTAGCTTCCTaGACATCGCCCCTAGTTTCAGGCACAGCCTCTCTCCCAGTTACG +
Preference number: 2 (lower is better)
Translates to: SSPESVIIASRPLAS*TSPLVSGTASLPVT
Trigger: CGTAACTGGGAGAGAGGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAATTATTACTGACTCTGGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 90 bp GAACAGACAAGCAGTGCTGCTTCGAGCAACCTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACGGGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: EQTSSAASSNLPLVK*TVRSLKVQKVTGRL
Trigger: CAACCTCCCCGTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 90 bp ACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTaGGAAAGGGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTG +
Preference number: 2 (lower is better)
Translates to: TKPEGTRWLRTPRAY*ERALFHALALGWLL
Trigger: CAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 2 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCGCTCAATTCAGACTGTaGCTGTTGAAGGATGATGGT +
Preference number: 2 (lower is better)
Translates to: KPEGTRWLRTPRAYLERAAQFRL*LLKDDG
Trigger: ACCATCATCCTTCAACAGCCACAGTCTGAATTGAGC...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 90 bp CTCCTTAAACATCTAAGTGCTTTCCAGTCTGTCCCTTGGTTGGCCTaGTTCTCCTGCCAGAGGGAAGGGGGTTCATCATGCCCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: LLKHLSAFQSVPWLA*FSCQREGGSSCPSC
Trigger: GCAAGAAGGGCATGATGAACCCCCTTCCCTCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAAGCACTTAGATGTTTAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAAGATGGCAACGGCAGTaGCTCACTGCGCGACTCTTT +
Preference number: 2 (lower is better)
Translates to: GDMRNSGKCLWAALWALRRWQRQ*LTARLF
Trigger: AAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCT...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCTTACAAAGAATGCTTaGTGCTGTCATAGGTCAGTC +
Preference number: 2 (lower is better)
Translates to: KPEGTRWLRTPRAYLERALTKNA*CCHRSV
Trigger: GACTGACCTATGACAGCATCAAGCATTCTTTGTAAG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGACAGACAAGCAGTGCTaGTTCGAGCAACCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQTDKQC*FEQPAS
Trigger: AGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGGAACAGACAAGCAGTaGTGCTTCGAGCAACCTGCC +
Preference number: 2 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGGTDKQ*CFEQPA
Trigger: GGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGTTCC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 2 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTACCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 2 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCACTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 2 (lower is better)
Translates to: RPQPEPAELRCTQGASSSLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAGTCTGTCCCTTGGTTaGCCTTGTTCTCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQSLSLG*PCSPAR
Trigger: TCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCGGGAGGTTGATACTGTaGAATCCAGATGCTTGCAAG +
Preference number: 2 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPGRLIL*NPDACK
Trigger: CTTGCAAGCATCTGGATTTCACAGTATCAACCTCCC...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGAGGACCAAGTCCCTCTaGTGGTGGCCTCCTAAAAGG +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRRTKSL*WWPPKR
Trigger: CCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCTTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGT +
Preference number: 2 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPLAAVP*VKGHPS
Trigger: ACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAA...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCGCCATCTTTTGGGAATaGCCCCTTTGTGATCATGAC +
Preference number: 2 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPAIFWE*PLCDHD
Trigger: GTCATGATCACAAAGGGGCCATTCCCAAAAGATGGC...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GDMRNSGKCLWAALWALRDIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAAAGCAAAATCCTCCCTaGCCCCATTCCCTAGAACTG +
Preference number: 2 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKKQNPP*PHSLEL
Trigger: CAGTTCTAGGGAATGGGGGCAGGGAGGATTTTGCTT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCACTGAATACGTGGCTTaGCATCTTTTGGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPTEYVA*HLLGMA
Trigger: GGCCATTCCCAAAAGATGGCAAGCCACGTATTCAGT...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGACAGACAAGCAGTGCTaGTTCGAGCAACCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRTDKQC*FEQPAS
Trigger: AGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 2 (lower is better)
Translates to: STNSYLSACGFQPQPTRIPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGACTCTTAAAAGGTCTGTaGGAGCCGCCTTCTCTACCT +
Preference number: 2 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGLLKGL*EPPSLP
Trigger: AGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAG...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGCTTCTTGCATATCCTTaGGGTTGCTTCCATCCCTGT +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQLLAYP*GCFHPC
Trigger: ACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAG...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGAGTCTGTCCCTTGGTTaGCCTTGTTCTCCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRSLSLG*PCSPAR
Trigger: TCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFASCSSS*MAIAWL
Trigger: CAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGA...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 90 bp CTGGGCTCCTCACTCCTAGTGCATCTGATTGAGGAATCTGATAACTaGCTGCAGTCTGGTCTGTTAGCCTCATTTGCAAAGAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LGSSLLVHLIEESDN*LQSGLLASFAKKGA
Trigger: GGCACCTTTCTTTGCAAATGAGGCTAACAGACCAGACTGCAGCAAGTTATCAGATTCCTCAATCAGATGCACTAGGAGTGAGGAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 2 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 2 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 2 (lower is better)
Translates to: GDMRNSGKCLWAALWALRDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAA +
Preference number: 2 (lower is better)
Translates to: GDMRNSGKCLWAALWALRHHPWK*SRNHWK
Trigger: TTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTG...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGAAGGGCCCTGTTTCATaGTCTAGCTCTTGGATGGCT +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRKGPVS*SSSWMA
Trigger: AGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFANPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: QPASGEVDRTESQSSKGDNPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAAAAATGGCCAGTGGACTaGGCAGTTGGTGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKKWPVD*AVGVPL
Trigger: TAAGGGGACACCAACTGCCCAGTCCACTGGCCATTT...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCTATGGGCAGCTCTCTaGGCTCTAAGAGGGACATGG +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGLWAAL*ALRGTW
Trigger: CCATGTCCCTCTTAGAGCCCAGAGAGCTGCCCATAG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 2 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR TCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCATTATTATCCACTGTCTaGGAGCACGTTTGGAAATAT +
Preference number: 2 (lower is better)
Translates to: RPQPEPAELRCTQGASSSLLSTV*EHVWKY
Trigger: ATATTTCCAAACGTGCTCTCAGACAGTGGATAATAA...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAACTGTGGATAGAGAAGTaGCTCATAAAGGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKLWIEK*LIKALE
Trigger: TTCCAGAGCCTTTATGAGTCACTTCTCTATCCACAG...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGAGGAGTCACACATTTaGGGAAAAGCTGCTATCGAT +
Preference number: 2 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGEESHI*GKAAID
Trigger: ATCGATAGCAGCTTTTCCTCAAATGTGTGACTCCTC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGGATCTACCGTTTTCCTaGGTAAACTGTAACTGGCTA +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQDLPFS*VNCNWL
Trigger: TAGCCAGTTACAGTTTACTCAGGAAAACGGTAGATC...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTGCAAAGATTTGGACTaGAAAGCTCAGAGACTCAGG +
Preference number: 2 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFACKDLD*KAQRLR
Trigger: CCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCA...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 2 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTAACAAACTCACGAAATaGCAGACTCCTCTGACTCTC +
Preference number: 2 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFANKLTK*QTPLTL
Trigger: GAGAGTCAGAGGAGTCTGGCATTTCGTGAGTTTGTT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAAACAAACTCACGAAATaGCAGACTCCTCTGACTCTC +
Preference number: 2 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGNKLTK*QTPLTL
Trigger: GAGAGTCAGAGGAGTCTGGCATTTCGTGAGTTTGTT...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 2 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTTTAATGTGTACAAAGTaGTCCGGGTGCTCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGLMCTK*SGCSAG
Trigger: CCCCGCTGAGCACCCGGACCACTTTGTACACATTAA...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 2 (lower is better)
Translates to: CRKISSTSACPPVIQHQILSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR TCA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCTTATTATCCACTGTCTaGGAGCACGTTTGGAAATAT +
Preference number: 2 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPLLSTV*EHVWKY
Trigger: ATATTTCCAAACGTGCTCTCAGACAGTGGATAATAA...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 2 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 2 (lower is better)
Translates to: IASRPLASLTSPLVSGTAFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGGAGCAAGTACAAAGTaGCTCTGCCTGCCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKGASTK*LCLPFH
Trigger: ATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCC...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTACAAAGTGGTCCGGGTaGTCAGCGGGGTGTTTTTGG +
Preference number: 2 (lower is better)
Translates to: ERICILHNRSTPSQIYHSTKWSG*SAGCFW
Trigger: CCAAAAACACCCCGCTGAGCACCCGGACCACTTTGT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAAGCAAAATCCTCCCTaGCCCCATTCCCTAGAACTG +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGKQNPP*PHSLEL
Trigger: CAGTTCTAGGGAATGGGGGCAGGGAGGATTTTGCTT...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGCATCTGGGGGAAATCTaGTCACTGGCTTATTCACTT +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRHLGEI*SLAYSL
Trigger: AAGTGAATAAGCCAGTGACCAGATTTCCCCCAGATG...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAATTCCTATGGCTTTaGAGCAAGTACAAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQKFLWL*SKYKVP
Trigger: AGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAAAATGGCCAGTGGACTaGGCAGTTGGTGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKKWPVD*AVGVPL
Trigger: TAAGGGGACACCAACTGCCCAGTCCACTGGCCATTT...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAAAATGGCCAGTGGACTaGGCAGTTGGTGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSKWPVD*AVGVPL
Trigger: TAAGGGGACACCAACTGCCCAGTCCACTGGCCATTT...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATCTTAAAAATGGCCAGTaGACTGGGCAGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LARAPILSVDTENQRPFHLKNGQ*TGQLVS
Trigger: GGACACCAACTGCCCAGTCCACTGGCCATTTTTAAG...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGTTTCCTCCTAGTATCTaGGGGAAAATCTGCAATTCT +
Preference number: 2 (lower is better)
Translates to: AGSLDGVWTLLKALISPQFPPSI*GKICNS
Trigger: AGAATTGCAGATTTTCCCCCAGATACTAGGAGGAAA...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 2 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 2 (lower is better)
Translates to: CFYQFYLTARRETLPPTLVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 2 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAACCCTAGTACCAATGTaGCTAGACCAGGGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKTLVPM*LDQGAK
Trigger: TTTGGCTCCCTGGTCTAGTCACATTGGTACTAGGGT...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAATTAAACCTGAGAGCCTaGCAAATGGTGAATCACAAT +
Preference number: 2 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKLNLRA*QMVNHN
Trigger: ATTGTGATTCACCATTTGTCAGGCTCTCAGGTTTAA...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTACTGAATACGTGGCTTaGCATCTTTTGGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGTEYVA*HLLGMA
Trigger: GGCCATTCCCAAAAGATGGCAAGCCACGTATTCAGT...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCTGTGGATAGAGAAGTaGCTCATAAAGGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGLWIEK*LIKALE
Trigger: TTCCAGAGCCTTTATGAGTCACTTCTCTATCCACAG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACTTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: QPASGEVDRTESQSSKGDFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAATGGCCTAGTCTCCACTaGATACGTGGCTTGCCATCT +
Preference number: 2 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKWPSLH*IRGLPS
Trigger: AGATGGCAAGCCACGTATTCAGTGGAGACTAGGCCA...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTATTTTGCTCGCCAGTGTaGGTGGAGTCCTCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVFCSPV*VESSGH
Trigger: GTGACCTGAGGACTCCACTCACACTGGCGAGCAAAA...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 2 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: ERICILHNRSTPSQIYHSDIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLADIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGAAATTCCTATGGCTTTaGAGCAAGTACAAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRKFLWL*SKYKVP
Trigger: AGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 2 (lower is better)
Translates to: CKHKFLSISMWIPATANQGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAACAATCTCAGGGCCTCTaGATTTTATGTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKQSQGL*ILCPVV
Trigger: CACTACAGGACATAAAATGCAGAGGCCCTGAGATTG...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTACTGCGCTAGAGGTTaGAAGCAGCGGAGAACTGGC +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYYCARG*KQRRTG
Trigger: GCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGATCTGGGGGAAAATCTaGAATTCTGCAAATGTTACT +
Preference number: 2 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRIWGKI*NSANVT
Trigger: AGTAACATTTGCAGAATTGCAGATTTTCCCCCAGAT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 2 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLALSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGG +
Preference number: 2 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVTLLPI*EGSNLR
Trigger: CCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGT...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAATTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGT +
Preference number: 2 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKLAAVP*VKGHPS
Trigger: ACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAA...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAATCTCCACTGAATACGTaGCTTGCCATCTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKSPLNT*LAIFWE
Trigger: TTCCCAAAAGATGGCAAGCCACGTATTCAGTGGAGA...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGTTAAACACCATCCCTaGAAATGCAGCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSVKHHP*KCSRNH
Trigger: GTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAAC...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTGGCCTAGTCTCCACTaGATACGTGGCTTGCCATCT +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYWPSLH*IRGLPS
Trigger: AGATGGCAAGCCACGTATTCAGTGGAGACTAGGCCA...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTTCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGG +
Preference number: 2 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSSARTS*TEMHSR
Trigger: CCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGA...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 2 (lower is better)
Translates to: ERICILHNRSTPSQIYHSTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAA +
Preference number: 2 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKHHPWK*SRNHWK
Trigger: TTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTG...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCACAAAGCCCTGGGATaGTTCTCTGGAGTTAGCAGG +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYHKALG*FSGVSR
Trigger: CCTGCTAACTCCAGAGAAGCATCCCAGGGCTTTGTG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGTCAAGAACATGTGTaGAGGCAGGAGTTAAAAACA +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGSQEHV*RQELKT
Trigger: TGTTTTTAACTCCTGCCTCCACACATGTTCTTGACT...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATTTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: LARAPILSVDTENQRPFHFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 2 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 2 (lower is better)
Translates to: HKFLSISMWIPATANQNCFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 2 (lower is better)
Translates to: CKHKFLSISMWIPATANQFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAAGTTAAACACCATCCCTaGAAATGCAGCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKVKHHP*KCSRNH
Trigger: GTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAAC...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTACAGTTTCGGTAACATaGAAAAGAACTCAGCTACTA +
Preference number: 2 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGTVSVT*KRTQLL
Trigger: TAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGT...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGTTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCAGCACTACCATGGCTaGATTGATCTACCGTTTTCC +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYQHYHG*IDLPFS
Trigger: GGAAAACGGTAGATCAATTCAGCCATGGTAGTGCTG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTACAATCTCAGGGCCTCTaGATTTTATGTCCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVQSQGL*ILCPVV
Trigger: CACTACAGGACATAAAATGCAGAGGCCCTGAGATTG...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTG +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYEGGSS*PSCISL
Trigger: CAAGGATATGCAAGAAGGGCATGATGAACCCCCTTC...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAAGGGAAATCTGGTCACTaGCTTATTCACTTTTCTGTC +
Preference number: 2 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKGKSGH*LIHFSV
Trigger: GACAGAAAAGTGAATAAGCCAGTGACCAGATTTCCC...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTCTCCAGAGTTCATTCTaGGATCGGTTTCCTAATGAG +
Preference number: 2 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSLQSSF*DRFPNE
Trigger: CTCATTAGGAAACCGATCTCAGAATGAACTCTGGAG...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR TCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAGGAGTCACACATTTaGGGAAAAGCTGCTATCGAT +
Preference number: 2 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSEESHI*GKAAID
Trigger: ATCGATAGCAGCTTTTCCTCAAATGTGTGACTCCTC...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACACAGTTTCGGTAACATaGAAAAGAACTCAGCTACTA +
Preference number: 2 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYTVSVT*KRTQLL
Trigger: TAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp GGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGCCACAGGCTCAAGACT +
Preference number: 3 (lower is better)
Translates to: GPGAQRGVFGGQ*EAQRDSHRLKT
Trigger: AGTCTTGAGCCTGTGGCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp AGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTaGAGCCCTAGCTTACGCGTGTCAGCCCCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: RDKYTPPALFSL*SPSLRVSAPGL
Trigger: CAAACCTGGGGCTGACACGCGTAAGCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp GGCAACGGCAGTGACTCACTGCGCGACTCTTTCTGGTaGTATAGAAGACCCTTGCCATCGCAGACCCTCCTT +
Preference number: 3 (lower is better)
Translates to: GNGSDSLRDSFW*YRRPLPSQTLL
Trigger: AAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp CAGAGCTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGGTGCCTCAAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: QSLPLEASARTS*TEMHSRCLKLK
Trigger: CTTGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GCCTTGTTCTCCTGCCAGAGGGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTGGGGTTGCTTCCATCC +
Preference number: 3 (lower is better)
Translates to: ALFSCQREGGSS*PSCISLGLLPS
Trigger: GGATGGAAGCAACCCCAAGGATATGCAAGAAGGGCATGATGAACCCCCTTCCCTCTGGCAGGAGAACAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp CAAAGGTACCTGTTTTGCCATGGCAATGGGAGGGGCTaGAGGAACAGCATGTTGCATGTAGGGATGGTCCGG +
Preference number: 3 (lower is better)
Translates to: QRYLFCHGNGRG*RNSMLHVGMVR
Trigger: CCGGACCATCCCTACATGCAACATGCTGTTCCTCCAGCCCCTCCCATTGCCATGGCAAAACAGGTACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp GGATGCTTCTCTGGAGTTAGCAGGGAAACAGGACCCTaGGCAAGCAGCTCGGGTGTCCTAGGAAGTGATTCT +
Preference number: 3 (lower is better)
Translates to: GCFSGVSRETGP*ASSSGVLGSDS
Trigger: AGAATCACTTCCTAGGACACCCGAGCTGCTTGCCCAGGGTCCTGTTTCCCTGCTAACTCCAGAGAAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp CACTGCGCGACTCTTTCTGGTGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTCCAATATGGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: HCATLSGDIEDP*HRRPSFQYGRA
Trigger: TGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp CTTTGGAGGCCTCAGCCAGAACCAGCTGAACTGAGATaGACTCAAGGTGCCTCAAGCTCAAGATTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LWRPQPEPAELR*TQGASSSRFCL
Trigger: GAGGCAGAATCTTGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GGAAATGCAGCAGAAACCACTGGAAAGCACAGAGCTTaGCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTG +
Preference number: 3 (lower is better)
Translates to: GNAAETTGKHRA*LWRPQPEPAEL
Trigger: CAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GACACCCAGAGCCTACTTGGAAAGGGCCCTGTTTCATaGTCTAGCTCTTGGATGGCTATTGCCTGGCTGATC +
Preference number: 3 (lower is better)
Translates to: DTQSLLGKGPVS*SSSWMAIAWLI
Trigger: GATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp GACTCTATTACACTCACTAAACCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCC +
Preference number: 3 (lower is better)
Translates to: DSITLTKPEGTR*LRTPRAYLERA
Trigger: GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp CACAAGTACCAGACAAGGAGGACCAAGTCCCTCTGCTaGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTTGGC +
Preference number: 3 (lower is better)
Translates to: HKYQTRRTKSLC*WPPKRQGLSFG
Trigger: GCCAAAACTCAAGCCTTGCCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCTCCTTGTCTGGTACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCTTTCCAGTCTGTCCCTaGGTTGGCCTTGTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPFPVCP*VGLVLL
Trigger: CAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAA...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGACGGGGTATGGACATaGCTTAAAGCACTTATCAGT +
Preference number: 3 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSDGVWT*LKALIS
Trigger: ACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp CTTGCCTTTGGAGGCCTCAGCCAGAACCAGCTGAACTaGGATGCACTCAAGGTGCCTCAAGCTCAAGATTCT +
Preference number: 3 (lower is better)
Translates to: LAFGGLSQNQLN*DALKVPQAQDS
Trigger: AGAATCTTGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCTCCAAAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp TACTGCGCTAGAGGTTGCAAGCAGCGGAGAACTGGCTaGACTTGGCAAAAGGCAAGGACTGGTCAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: YCARGCKQRRTG*TWQKARTGQSF
Trigger: GAAGCTTTGACCAGTCCTTGCCTTTTGCCAAGTTCAGCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GCTGGAGGAAGCGGTGTTAAACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAAGCACAGAGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: AGGSGVKHHPWK*SRNHWKAQSLP
Trigger: AGGCAAGCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAACACCGCTTCCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp AGAAGACCCTTGCCATCGCAGACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGGGCCTCTGCATTTTAT +
Preference number: 3 (lower is better)
Translates to: RRPLPSQTLLPI*EGSNLRASAFY
Trigger: ATAAAATGCAGAGGCCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp AAGGGAGCTGGAGGAAGCGGTGTTAAACACCATCCCTaGAAATGCAGCAGAAACCACTGGAAAGCACAGAGC +
Preference number: 3 (lower is better)
Translates to: KGAGGSGVKHHP*KCSRNHWKAQS
Trigger: GCTCTGTGCTTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAACACCGCTTCCTCCAGCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGACTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAA +
Preference number: 3 (lower is better)
Translates to: GDMRNSGKCLWAALWALRLPLVK*TVRSLK
Trigger: TTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAG...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTCCTTCTTGCATATCCTaGGGGTTGCTTCCATCCCTG +
Preference number: 3 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFAPSCIS*GLLPSL
Trigger: CAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGG...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp AAAAGAGAATCACTGCTCCCTTTTTGCTCGCCAGTGTaGGTGGAGTCCTCAGGTCACCGGCATGTACACAAG +
Preference number: 3 (lower is better)
Translates to: KRESLLPFCSPV*VESSGHRHVHK
Trigger: CTTGTGTACATGCCGGTGACCTGAGGACTCCACTCACACTGGCGAGCAAAAAGGGAGCAGTGATTCTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp TGTCCTGTAGTGTTAATGTGTACAAAGTGGTCCGGGTaGTCAGCGGGGTGTTTTTGGAGGACAGTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: CPVVLMCTKWSG*SAGCFWRTVRS
Trigger: GCTTCTCACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAACACTACAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GTACACAAGTACCAGACAAGGAGGACCAAGTCCCTCTaGTGGTGGCCTCCTAAAAGGCAAGGCTTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: VHKYQTRRTKSL*WWPPKRQGLSF
Trigger: AAAACTCAAGCCTTGCCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCTCCTTGTCTGGTACTTGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp TGGTCGATTACACAAGCATCCCATGTAATGCCCCCATaGCCCAAAGGTACCTGTTTTGCCATGGCAATGGGA +
Preference number: 3 (lower is better)
Translates to: WSITQASHVMPP*PKGTCFAMAMG
Trigger: TCCCATTGCCATGGCAAAACAGGTACCTTTGGGGCATGGGGGCATTACATGGGATGCTTGTGTAATCGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGTGCATATCCTTGGGGTaGCTTCCATCCCTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: AGSLDGVWTLLKALISPQCISLG*LPSLFD
Trigger: ATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp TTCCATGTCCTCATCACCAAAACTTCCAGGGACTACTaGCCTAGGACCTGGTACTCTATCTTTCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: FHVLITKTSRDY*PRTWYSIFPQQ
Trigger: CTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTTTGGTGATGAGGACATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp CAGCCTCTCTCCCAGTTACGAGGCGAGACAGGATTCTaGAGGGGGAAAGGATATGTATTCTACACAACAGGT +
Preference number: 3 (lower is better)
Translates to: QPLSQLRGETGF*RGKGYVFYTTG
Trigger: ACCTGTTGTGTAGAATACATATCCTTTCCCCCTTCAGAATCCTGTCTCGCCTCGTAACTGGGAGAGAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GAAAATTACAGCCAGATGGCAACGGCAGTGACTCACTaGGCGACTCTTTCTGGTGATATAGAAGACCCTTGC +
Preference number: 3 (lower is better)
Translates to: ENYSQMATAVTH*ATLSGDIEDPC
Trigger: GCAAGGGTCTTCTATATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCTGGCTGTAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAACACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 3 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp AATTCCTATGGCTTTGGAGCAAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTCATCACCAAAACTTCC +
Preference number: 3 (lower is better)
Translates to: NSYGFGASTKCL*LPFHVLITKTS
Trigger: GGAAGTTTTGGTGATGAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCCAAAGCCATAGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp AAAGGTGACGGGGAGGTTGATACTGTGAAATCCAGATaGTTGCAAGAGCCCCAATTCTCAGTGTTGACACTG +
Preference number: 3 (lower is better)
Translates to: KGDGEVDTVKSR*LQEPQFSVLTL
Trigger: CAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTTCACAGTATCAACCTCCCCGTCACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp CTACTTGGAAAGGGCCCTGTTTCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTGATCAGTAAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: LLGKGPVSCSSS*MAIAWLISKAS
Trigger: ACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCCAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp GAGAGGTTCTGTGGCATTTTGAGCCTTGCAAAGATTTaGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: ERFCGILSLAKI*TEKLRDSGRSA
Trigger: GGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAGGCCTCTAGCTTCCTaGACATCGCCCCTAGTTTCA +
Preference number: 3 (lower is better)
Translates to: LARAPILSVDTENQRPFHRPLAS*TSPLVS
Trigger: TGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTACTACCATGGCTGAATaGATCTACCGTTTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFATTMAE*IYRFPE
Trigger: CTCAGGAAAACGGTAGATCAATTCAGCCATGGTAGT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp GAAATTGAACTAGGTGACATGAGGAATTCTGGAAAATaGCTATGGGCAGCTCTCTGGGCTCTAAGAGGGACA +
Preference number: 3 (lower is better)
Translates to: EIELGDMRNSGK*LWAALWALRGT
Trigger: TGTCCCTCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACCTAGTTCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CCA 72 bp CATGTCTCTGAATTACTCCCTTTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGTACCAATGTGACTAGA +
Preference number: 3 (lower is better)
Translates to: HVSELLPLAAVP*VKGHPSTNVTR
Trigger: TCTAGTCACATTGGTACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAAAGGGAGTAATTCAGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp CAAAGTCCCTTTCCTCCTAGTATCTGGGGGAAAATCTaGAATTCTGCAAATGTTACTGCGCTAGAGGTTGCA +
Preference number: 3 (lower is better)
Translates to: QSPFPPSIWGKI*NSANVTALEVA
Trigger: TGCAACCTCTAGCGCAGTAACATTTGCAGAATTGCAGATTTTCCCCCAGATACTAGGAGGAAAGGGACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR GCA 72 bp AAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCAGCACCAGATACACTT +
Preference number: 3 (lower is better)
Translates to: KNILLQKDLFHF*LSPSHSAPDTL
Trigger: AAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR GCA 72 bp ACACAACAGGTCAACGCCCTCTCAGATATATCACTCTaGTTACAAAGAATGCTTGATGCTGTCATAGGTCAG +
Preference number: 3 (lower is better)
Translates to: TQQVNALSDISL*LQRMLDAVIGQ
Trigger: CTGACCTATGACAGCATCAAGCATTCTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAACACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 3 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAAAATGCTGTAGGACACTaGCTTTTATCAGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKNAVGH*LLSVLS
Trigger: AGATAGAACTGATAAAAGCAAGTGTCCTACAGCATT...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGAAAATTCCTATGGCTTaGGAGCAAGTACAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: CFYQFYLTARRETLPPTLKIPMA*EQVQSA
Trigger: GGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTT...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp ATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATTTATCGGCTCCTAATG +
Preference number: 3 (lower is better)
Translates to: IQHQIHFGNSVC*FLIRCIYRLLM
Trigger: CATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
3UTR-3UTR CAA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTAGGTTCTGTGGCATTTaGAGCCTTGCAAAGATTTGG +
Preference number: 3 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSRFCGI*SLAKIW
Trigger: CCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCT...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR-3UTR CAA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAAATGCTGTAGGACACTaGCTTTTATCAGTTCTATCT +
Preference number: 3 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVNAVGH*LLSVLS
Trigger: AGATAGAACTGATAAAAGCAAGTGTCCTACAGCATT...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR TCA 72 bp AAAGAAATGATCTTTTTCATACTCCAGAGTTCATTCTaGGATCGGTTTCCTAATGAGGTGTTTATTATCCAC +
Preference number: 3 (lower is better)
Translates to: KEMIFFILQSSF*DRFPNEVFIIH
Trigger: GTGGATAATAAACACCTCATTAGGAAACCGATCTCAGAATGAACTCTGGAGTATGAAAAAGATCATTTCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGPEGTR*LRTPRA
Trigger: GGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGG...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGGTCCGGTCCCTGCCATaGGGAGTGGGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGVRSLP*GVGRRG
Trigger: TCCTCTTCTCCCCACTCCCCATGGCAGGGACCGGAC...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGTCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCCGCCGCTCCTTGCCTaGCCGCTTGCTCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQPPLLA*PLAPRP
Trigger: CGGGCGGGGAGCAAGCGGTCAGGCAAGGAGCGGCGG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR GCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAGGACCAAGTCCCTCTaGTGGTGGCCTCCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRRTKSL*WWPPKR
Trigger: CCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCACCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPQPEPAELRCTQGASSSPEGTR*LRTPRA
Trigger: GGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGG...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTGCCCACCGGCCGCGCTaGCTCACACTCTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSAHRPR*LTLSLT
Trigger: TGTGAGGGAGAGTGTGAGCCAGCGCGGCCGGTGGGC...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR TCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCAGCTGTCCCTTGGGTaGAAGGTCACCCTAGTACCA +
Preference number: 4 (lower is better)
Translates to: KPEGTRWLRTPRAYLERAQLSLG*KVTLVP
Trigger: TGGTACTAGGGTGACCTTTCACCCAAGGGACAGCTG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGCCAGCTGAACTGAGATaGACTCAAGGTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRPAELR*TQGASS
Trigger: GCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGG...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGCACAAAGCCCTGGGATaGTTCTCTGGAGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRHKALG*FSGVSR
Trigger: CCTGCTAACTCCAGAGAAGCATCCCAGGGCTTTGTG...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGTACCTGTTTTGCCATaGCAATGGGAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSVPVLP*QWEGLE
Trigger: CTCCAGCCCCTCCCATTGCCATGGCAAAACAGGTAC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATCGGCGCGGGGCCACTaGCGGGTCGTGATGAGCACT +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPESARGH*RVVMST
Trigger: AGTGCTCATCACGACCCGCCAGTGGCCCCGCGCCGA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR GCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTGGATGGTCCGGTCCCTaGCATGGGGAGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSGWSGP*HGEWGE
Trigger: TTCTCCCCACTCCCCATGGCAGGGACCGGACCATCC...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCAAAGGTACCTGTTTTaGCATGGCAATGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KPEGTRWLRTPRAYLERAQRYLF*HGNGRG
Trigger: GCCCCTCCCATTGCCATGGCAAAACAGGTACCTTTG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 72 bp GAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTaGGAAAGGGCCCTGTTTCATGCTCTAGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: EGTRWLRTPRAY*ERALFHALALG
Trigger: TCCAAGAGCTAGAGCATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGGCGAGACAGGATTCTaGAGGGGGAAAGGATATGTA +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSGETGF*RGKGYV
Trigger: TACATATCCTTTCCCCCTTCAGAATCCTGTCTCGCC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAATGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKCSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTGTCCGGTCCCTGCCATaGGGAGTGGGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFAVRSLP*GVGRRG
Trigger: TCCTCTTCTCCCCACTCCCCATGGCAGGGACCGGAC...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAACCCCTCCCAGCAGGCTaGCATCTCCCAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKPLPAG*HLPTPE
Trigger: TTCTGGAGTTGGGAGATGTCAGCCTGCTGGGAGGGG...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR GCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: AGSLDGVWTLLKALISPQSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAATGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQCSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSACSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRNCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCACTGAATACGTGGCTTaGCATCTTTTGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: KPEGTRWLRTPRAYLERATEYVA*HLLGMA
Trigger: GGCCATTCCCAAAAGATGGCAAGCCACGTATTCAGT...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGGATGGTCCGGTCCCTaGCATGGGGAGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAGWSGP*HGEWGE
Trigger: TTCTCCCCACTCCCCATGGCAGGGACCGGACCATCC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTTCAAAGCAGCCGTGCTaGGGCACACCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSSKQPC*GTPPQL
Trigger: AAGCTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGA...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR CCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGCATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQLDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAACTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPELDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGACTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRLDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGGCTCCTGGTTACCCTaGCTGTCCCGCGCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRGSWLP*LSRAGN
Trigger: ATTCCCAGCGCGGGACAGCCAGGGTAACCAGGAGCC...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR CCA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTGTTGTTGTCGGCTCCTaGTTACCCTGGCTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFVVVGS*LPWLSR
Trigger: GCGGGACAGCCAGGGTAACCAGGAGCCGACAACAAC...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR CCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCTTCTTGCATATCCTTaGGGTTGCTTCCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: KPEGTRWLRTPRAYLERALLAYP*GCFHPC
Trigger: ACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCCAAGCAGCGGAGAACTaGCTGAACTTGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAQAAEN*LNLAKG
Trigger: GCCTTTTGCCAAGTTCAGCCAGTTCTCCGCTGCTTG...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCACCAAGTCCCTCTGCTaGTGGCCTCCTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTATKSLC*WPPKRQ
Trigger: TTGCCTTTTAGGAGGCCACCAGCAGAGGGACTTGGT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGTCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCAACCCTAGTACCAATGTaGCTAGACCAGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RPQPEPAELRCTQGASSSTLVPM*LDQGAK
Trigger: TTTGGCTCCCTGGTCTAGTCACATTGGTACTAGGGT...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCTACCATGGCTGAATTaGTCTACCGTTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSLPWLN*STVFLS
Trigger: ACTCAGGAAAACGGTAGATCAATTCAGCCATGGTAG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAACCATGTGCAAAGGCTaGGGCAGTGCTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGTMCKG*GSAPPS
Trigger: CGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGT...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGACCATGTGCAAAGGCTaGGGCAGTGCTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQTMCKG*GSAPPS
Trigger: CGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQIGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTATGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGTGTGCTGGGTGAGTTaGTGCTCTGCTCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNVCWVS*CSAPRG
Trigger: CCCACGGGGAGCAGAGCAGCAACTCACCCAGCACAC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGGGCTGCCGTGGTGGCTaGAGTAGGGTAAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQGCRGG*SRVREA
Trigger: GGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCC...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTATCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVSSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKSSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGCSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSCSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSANCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGCTCCACCTTCTGTCTaGGTAAGAGATCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSAPPSV*VRDPFC
Trigger: ACAAAATGGATCTCTTACGCAGACAGAAGGTGGAGC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCAAGCAAAATCCTCCCTaGCCCCATTCCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAKQNPP*PHSLEL
Trigger: CAGTTCTAGGGAATGGGGGCAGGGAGGATTTTGCTT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGGCCTCAGCCAGAACCAGCTGAACTGAGATGCACTCAAGGTGCCTCAAGCTCATGTCAGCCCCAGGTTTaGTCCAGCTATTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: RPQPEPAELRCTQGASSSCQPQV*SSYSQA
Trigger: TGCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACA...TGAGCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCGGATGGTCCGGTCCCTaGCATGGGGAGTGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSGWSGP*HGEWGE
Trigger: TTCTCCCCACTCCCCATGGCAGGGACCGGACCATCC...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATCAAAGCAGCCGTGCTaGGGCACACCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRSKQPC*GTPPQL
Trigger: AAGCTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGACCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIGGDGC*RYRSDC
Trigger: GCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCC...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQILDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACTGGCTGTCCCGCGCTaGGAATCCATGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRLAVPR*ESMITW
Trigger: CCAGGTTATCATGGATTCCCAGCGCGGGACAGCCAG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGACTGCATATCCACCCCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGLHIHP*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAG...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCCTTAAAAATGGCCAGTaGACTGGGCAGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTALKNGQ*TGQLVS
Trigger: GGACACCAACTGCCCAGTCCACTGGCCATTTTTAAG...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCGTTAAACACCATCCCTaGAAATGCAGCAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSVKHHP*KCSRNH
Trigger: GTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAAC...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCTATGGGCAGCTCTCTaGGCTCTAAGAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPLWAAL*ALRGTW
Trigger: CCATGTCCCTCTTAGAGCCCAGAGAGCTGCCCATAG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGGTCCGGTCCCTGCCATaGGGAGTGGGGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGVRSLP*GVGRRG
Trigger: TCCTCTTCTCCCCACTCCCCATGGCAGGGACCGGAC...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGAGGGAAACAGGACCCTaGGCAAGCAGCTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILRETGP*ASSSGV
Trigger: GACACCCGAGCTGCTTGCCCAGGGTCCTGTTTCCCT...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 72 bp AGCAGTGCTGCTTCGAGCAACCTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: SSAASSNLPLVK*TVRSLKVQKVT
Trigger: CGTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTGCTCGAAGCAGCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 72 bp AGGGAAGGGGGTTCATCATGCCCTTCTTGCATATCCTaGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: REGGSSCPSCIS*GLLPSLFDVSL
Trigger: GAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGGGCATGATGAACCCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRILCAG*VAALLP
Trigger: GGGGAGCAGAGCAGCAACTCACCCAGCACACAAAAT...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAAGGGAAGCCAGGAATaGTTAAAGGAATGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRKGSQE*LKECKC
Trigger: ACACTTACATTCCTTTAATCATTCCTGGCTTCCCTT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR TCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGACAGCTGTCCCTTGGGTaGAAGGTCACCCTAGTACCA +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRQLSLG*KVTLVP
Trigger: TGGTACTAGGGTGACCTTTCACCCAAGGGACAGCTG...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGCTAAGCTGGGAGTCTTaGCGGGGTATGGACATTGCT +
Preference number: 4 (lower is better)
Translates to: AGSLDGVWTLLKALISPQLSWES*RGMDIA
Trigger: AGCAATGTCCATACCCCGTCAAGACTCCCAGCTTAG...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAACCATGTGCAAAGGCTaGGGCAGTGCTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQITMCKG*GSAPPS
Trigger: CGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGT...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTACTTTCAAAGCAGCCGTaGTGGGGCACACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVLSKQP*WGTPPQ
Trigger: CTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGAAAG...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR GCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACTTTCAAAGCAGCCGTaGTGGGGCACACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSLSKQP*WGTPPQ
Trigger: CTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGAAAG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACTTTCAAAGCAGCCGTaGTGGGGCACACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSALSKQP*WGTPPQ
Trigger: CTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGAAAG...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGGGTGAGTTGCTGCTCTaGTCCCCGTGGGCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQGELLL*SPWACV
Trigger: TACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACC...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQSSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSSSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACSSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSARYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRICSSGG*GCSSRL
Trigger: CAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCA...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGNCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAACAAAGTGGTCCGGGTaGTCAGCGGGGTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRTKWSG*SAGCFW
Trigger: CCAAAAACACCCCGCTGAGCACCCGGACCACTTTGT...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCACTGAATACGTGGCTTaGCATCTTTTGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTATEYVA*HLLGMA
Trigger: GGCCATTCCCAAAAGATGGCAAGCCACGTATTCAGT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCCAGCTGAACTGAGATaGACTCAAGGTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPPAELR*TQGASS
Trigger: GCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCACAGACAAGCAGTGCTaGTTCGAGCAACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPTDKQC*FEQPAS
Trigger: AGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGT...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAGGAACAGACAAGCAGTaGTGCTTCGAGCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRGTDKQ*CFEQPA
Trigger: GGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGTTCC...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCTACTGCGCTAGAGGTTaGAAGCAGCGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSYCARG*KQRRTG
Trigger: GCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAGGACCAAGTCCCTCTaGTGGTGGCCTCCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQRTKSL*WWPPKR
Trigger: CCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAAGGACCAAGTCCCTCTaGTGGTGGCCTCCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKRTKSL*WWPPKR
Trigger: CCTTTTAGGAGGCCACCAGCAGAGGGACTTGGTCCT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGCTCTCTTCTCGCTTTaGAGCCCTAGCTTACGCGTG +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGALFSL*SPSLRV
Trigger: CACGCGTAAGCTAGGGCTGCAAAGCGAGAAGAGAGC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAGCTCTCTTCTCGCTTTaGAGCCCTAGCTTACGCGTG +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRALFSL*SPSLRV
Trigger: CACGCGTAAGCTAGGGCTGCAAAGCGAGAAGAGAGC...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKCVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRCVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAACCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTANPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGAAATTCCTATGGCTTTaGAGCAAGTACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRKFLWL*SKYKVP
Trigger: AGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTT...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCCAGAGGGCACACGCTaGCTTAGGACACCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIPEGTR*LRTPRA
Trigger: GGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGACCAAGTCCCTCTGCTaGTGGCCTCCTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AGSLDGVWTLLKALISPQTKSLC*WPPKRQ
Trigger: TTGCCTTTTAGGAGGCCACCAGCAGAGGGACTTGGT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCAACTCATGTACCCCCTaGGAAACTGGTGTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTANSCTP*ETGVGN
Trigger: GTTACCAACACCAGTTTCCCAGGGGGTACATGAGTT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGTACCTGTTTTGCCATaGCAATGGGAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRVPVLP*QWEGLE
Trigger: CTCCAGCCCCTCCCATTGCCATGGCAAAACAGGTAC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCAGGGAAACAGGACCCTaGGCAAGCAGCTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSRETGP*ASSSGV
Trigger: GACACCCGAGCTGCTTGCCCAGGGTCCTGTTTCCCT...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCCTCCAGAGTTCATTCTaGGATCGGTTTCCTAATGAG +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTALQSSF*DRFPNE
Trigger: CTCATTAGGAAACCGATCTCAGAATGAACTCTGGAG...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAACAGCTGTCCCTTGGGTaGAAGGTCACCCTAGTACCA +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQQLSLG*KVTLVP
Trigger: TGGTACTAGGGTGACCTTTCACCCAAGGGACAGCTG...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAATGGCCTAGTCTCCACTaGATACGTGGCTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKWPSLH*IRGLPS
Trigger: AGATGGCAAGCCACGTATTCAGTGGAGACTAGGCCA...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGATCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRSARTS*TEMHSR
Trigger: CCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGA...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCGAGGAGTCACACATTTaGGGAAAAGCTGCTATCGAT +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAEESHI*GKAAID
Trigger: ATCGATAGCAGCTTTTCCTCAAATGTGTGACTCCTC...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCATTTTGCTCGCCAGTGTaGGTGGAGTCCTCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSFCSPV*VESSGH
Trigger: GTGACCTGAGGACTCCACTCACACTGGCGAGCAAAA...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRICWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACTGGCCGTCTGTCTGTaGTCCACCTTCTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQILAVCL*STFCRK
Trigger: CTTACGACAGAAGGTGGAGCACAGACAGACGGCCAG...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414461.6
ENST00000449924.6
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACTGGCCGTCTGTCTGTaGTCCACCTTCTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSALAVCL*STFCRK
Trigger: CTTACGACAGAAGGTGGAGCACAGACAGACGGCCAG...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000414461.6
ENST00000449924.6
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAACTTTGTGTCTGTGACTaGTGGCCGTCTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKLCVCD*WPSVCA
Trigger: AGCACAGACAGACGGCCAGCAGTCACAGACACAAAG...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGACTTTGTGTCTGTGACTaGTGGCCGTCTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRLCVCD*WPSVCA
Trigger: AGCACAGACAGACGGCCAGCAGTCACAGACACAAAG...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVISSESG*RGGCSR
Trigger: CCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGA...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRRYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSVTVSG*SGCSSG
Trigger: ACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGAC...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRINCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRSTKCL*LPFHVL
Trigger: GAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACT...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQSTKCL*LPFHVL
Trigger: GAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACGGAGCAAGTACAAAGTaGCTCTGCCTGCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QPASGEVDRTESQSSKGDGASTK*LCLPFH
Trigger: ATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCC...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPDIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTATACTGCGCTAGAGGTTaGAAGCAGCGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVYCARG*KQRRTG
Trigger: GCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATCCGTTACCAATCCCTaGCAACCAGCACTACCATGG +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRSVTNP*QPALPW
Trigger: CCATGGTAGTGCTGGTTGGCAGGGATTGGTAACGGA...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGATCAAAGCAGCCGTGCTaGGGCACACCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRSKQPC*GTPPQL
Trigger: AAGCTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGA...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR CCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCATGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSACVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTATGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVCVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCTGCATATCCACCCCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNLHIHP*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000618140.3
ENST00000626107.2
CDS-3UTR CCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACTGCATATCCACCCCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRLHIHP*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAG...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000618140.3
ENST00000626107.2
CDS-3UTR CCA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPNPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGAGTCAAGAACATGTGTaGAGGCAGGAGTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGSQEHV*RQELKT
Trigger: TGTTTTTAACTCCTGCCTCCACACATGTTCTTGACT...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAAAATGGCCAGTGGACTaGGCAGTTGGTGTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRKWPVD*AVGVPL
Trigger: TAAGGGGACACCAACTGCCCAGTCCACTGGCCATTT...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAAGTCTGTCCCTTGGTTaGCCTTGTTCTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKSLSLG*PCSPAR
Trigger: TCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATTCCAGTCTGTCCCTTaGTTGGCCTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRFQSVP*LALFSC
Trigger: GCAGGAGAACAAGGCCAACCAAGGGACAGACTGGAA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGGCAATGGGAGGGGCTaGAGGAACAGCATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRGNGRG*RNSMLH
Trigger: ATGCAACATGCTGTTCCTCCAGCCCCTCCCATTGCC...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSILCAG*VAALLP
Trigger: GGGGAGCAGAGCAGCAACTCACCCAGCACACAAAAT...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQILCAG*VAALLP
Trigger: GGGGAGCAGAGCAGCAACTCACCCAGCACACAAAAT...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNILCAG*VAALLP
Trigger: GGGGAGCAGAGCAGCAACTCACCCAGCACACAAAAT...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAACTACTTTGTGTCTGTaGCTGCTGGCCGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQTTLCL*LLAVCL
Trigger: CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAATCAAATGGGCTCCTCTaGAAGCGGCTGCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKSNGLL*KRLPWW
Trigger: CCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGA...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCACCCCTCCCAGCAGGCTaGCATCTCCCAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSPLPAG*HLPTPE
Trigger: TTCTGGAGTTGGGAGATGTCAGCCTGCTGGGAGGGG...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACGCGACTCTTTCTGGTaGTATAGAAGACCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRRDSFW*YRRPLP
Trigger: TGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGGCGAGACAGGATTCTaGAGGGGGAAAGGATATGTA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRGETGF*RGKGYV
Trigger: TACATATCCTTTCCCCCTTCAGAATCCTGTCTCGCC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAGGCGAGACAGGATTCTaGAGGGGGAAAGGATATGTA +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRGETGF*RGKGYV
Trigger: TACATATCCTTTCCCCCTTCAGAATCCTGTCTCGCC...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCATCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGG +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSSARTS*TEMHSR
Trigger: CCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGA...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGTCAGCCAGAACCAGCTaGACTGAGATGCACTCAAGG +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRSARTS*TEMHSR
Trigger: CCTTGAGTGCATCTCAGTTCAGCTGGTTCTGGCTGA...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGCTAAAAGGCAAGGCTTaGGTTTTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGSLDGVWTLLKALISPQLKGKA*VLADEQ
Trigger: CTGCTCATCAGCCAAAACTCAAGCCTTGCCTTTTAG...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCTAAAAGGCAAGGCTTaGGTTTTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPLKGKA*VLADEQ
Trigger: CTGCTCATCAGCCAAAACTCAAGCCTTGCCTTTTAG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTCTAAGCTGGGAGTCTTaGCGGGGTATGGACATTGCT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSALSWES*RGMDIA
Trigger: AGCAATGTCCATACCCCGTCAAGACTCCCAGCTTAG...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGATAGGAGTAACCCAATaGATACTGTATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGIGVTQ*ILYGLK
Trigger: TTTCAGACCATACAGTATTCATTGGGTTACTCCTAT...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRIRYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIRYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRISGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCTGGCCGTCTGTCTGTaGTCCACCTTCTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLAVCL*STFCLR
Trigger: ACGCAGACAGAAGGTGGAGCACAGACAGACGGCCAG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCTGGCCGTCTGTCTGTaGTCCACCTTCTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGLAVCL*STFCLR
Trigger: ACGCAGACAGAAGGTGGAGCACAGACAGACGGCCAG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAAGTACAAAGTGCCTCTaGCTGCCCTTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVSTKCL*LPFHVL
Trigger: GAGGACATGGAAGGGCAGGCAGAGGCACTTTGTACT...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGACAAAGTGGTCCGGGTaGTCAGCGGGGTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQTKWSG*SAGCFW
Trigger: CCAAAAACACCCCGCTGAGCACCCGGACCACTTTGT...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTACAAAGTGGTCCGGGTaGTCAGCGGGGTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACTKWSG*SAGCFW
Trigger: CCAAAAACACCCCGCTGAGCACCCGGACCACTTTGT...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPASGEVDRTESQSSKGDDIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAACGGCAGTGACTCACTaGGCGACTCTTTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQTAVTH*ATLSGD
Trigger: ATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTCACCATCCCTGGAAATaGAGCAGAAACCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSHHPWK*SRNHWK
Trigger: TTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTG...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAACAGACAAGCAGTGCTaGTTCGAGCAACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVTDKQC*FEQPAS
Trigger: AGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGT...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTACTGCGCTAGAGGTTaGAAGCAGCGGAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNYCARG*KQRRTG
Trigger: GCCAGTTCTCCGCTGCTTGCAACCTCTAGCGCAGTA...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCTTCTGCAAATGTTACTaGGCTAGAGGTTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPFCKCY*ARGCKQ
Trigger: CTGCTTGCAACCTCTAGCGCAGTAACATTTGCAGAA...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCATCTGGGGGAAAATCTaGAATTCTGCAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: KPEGTRWLRTPRAYLERAIWGKI*NSANVT
Trigger: AGTAACATTTGCAGAATTGCAGATTTTCCCCCAGAT...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCCGTTACCAATCCCTaGCAACCAGCACTACCATGG +
Preference number: 4 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILSVTNP*QPALPW
Trigger: CCATGGTAGTGCTGGTTGGCAGGGATTGGTAACGGA...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCTGTCAGCCCCAGGTTTaGTCCAGCTATTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSCQPQV*SSYSQA
Trigger: TGCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACA...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCATGTAATGCCCCCATaGCCCAAAGGTACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPHVMPP*PKGTCF
Trigger: AAAACAGGTACCTTTGGGGCATGGGGGCATTACATG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATTCAAAGCAGCCGTGCTaGGGCACACCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHSKQPC*GTPPQL
Trigger: AAGCTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGA...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGATCCATTCTGCGGAGGTaGTGGAAATGGGATGGTAGT +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGSILRR*WKWDGS
Trigger: ACTACCATCCCATTTCCACCACCTCCGCAGAATGGA...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAATGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKCVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCCTGGTAAACCACACCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSLVNHT*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAG...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
CDS-3UTR CCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCTGGTAAACCACACCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQLVNHT*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
CDS-3UTR CCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCATATCTCAGGCAGATaGCTGAAGGAAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQHISGR*LKEAPP
Trigger: GGGTGGGGCTTCCTTCAGCCATCTGCCTGAGATATG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR CCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGACTTAAAAATGGCCAGTaGACTGGGCAGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRLKNGQ*TGQLVS
Trigger: GGACACCAACTGCCCAGTCCACTGGCCATTTTTAAG...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGACTTAAAAATGGCCAGTaGACTGGGCAGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRLKNGQ*TGQLVS
Trigger: GGACACCAACTGCCCAGTCCACTGGCCATTTTTAAG...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGACTCTTAAAAGGTCTGTaGGAGCCGCCTTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRLLKGL*EPPSLP
Trigger: AGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAG...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTCTCTTAAAAGGTCTGTaGGAGCCGCCTTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFLLKGL*EPPSLP
Trigger: AGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAG...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGATCTGGAAAATGCCTATaGGCAGCTCTCTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGSGKCL*AALWAL
Trigger: TAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGA...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCGGCAATGGGAGGGGCTaGAGGAACAGCATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCGNGRG*RNSMLH
Trigger: ATGCAACATGCTGTTCCTCCAGCCCCTCCCATTGCC...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGTACCTGTTTTGCCATaGCAATGGGAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNVPVLP*QWEGLE
Trigger: CTCCAGCCCCTCCCATTGCCATGGCAAAACAGGTAC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIILCAG*VAALLP
Trigger: GGGGAGCAGAGCAGCAACTCACCCAGCACACAAAAT...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGACTACTTTGTGTCTGTaGCTGCTGGCCGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQTTLCL*LLAVCL
Trigger: CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGT...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTAGGAAGCCCCACCCCTaGATGCCTAAGGTAATTAAT +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFARKPHP*MPKVIN
Trigger: ATTAATTACCTTAGGCATTCAGGGGTGGGGCTTCCT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR TCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTAGATGGCAACGGCAGTaGCTCACTGCGCGACTCTTT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIRWQRQ*LTARLF
Trigger: AAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCT...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCAGATGGCAACGGCAGTaGCTCACTGCGCGACTCTTT +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSRWQRQ*LTARLF
Trigger: AAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCT...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCATTCCCTAGAACTGTaGAAGCCCGCATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQHSLEL*KPASHS
Trigger: GGAATGGGATGCGGGCTTTCACAGTTCTAGGGAATG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCATTCCCTAGAACTGTaGAAGCCCGCATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNHSLEL*KPASHS
Trigger: GGAATGGGATGCGGGCTTTCACAGTTCTAGGGAATG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCCAGAACCAGCTGAACTaGGATGCACTCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSQNQLN*DALKVP
Trigger: AGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTG...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACGGGAGGTTGATACTGTaGAATCCAGATGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: QPASGEVDRTESQSSKGDGRLIL*NPDACK
Trigger: CTTGCAAGCATCTGGATTTCACAGTATCAACCTCCC...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCAGCACTACCATGGCTaGATTGATCTACCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQQHYHG*IDLPFS
Trigger: GGAAAACGGTAGATCAATTCAGCCATGGTAGTGCTG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAACTAAAAGGCAAGGCTTaGGTTTTGGCTGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKLKGKA*VLADEQ
Trigger: CTGCTCATCAGCCAAAACTCAAGCCTTGCCTTTTAG...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTTTTGCTCGCCAGTGTaGGTGGAGTCCTCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSFCSPV*VESSGH
Trigger: GTGACCTGAGGACTCCACTCACACTGGCGAGCAAAA...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGTGGGAATTCCATTCTaGGGAGGTGGTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNVGIPF*GGGGNG
Trigger: CCCATTTCCACCACCTCCGCAGAATGGAATTCCCAC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTTGCTGGGTGAGTTGCTaGTCTGCTCCCCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACCWVSC*SAPRGL
Trigger: AAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCA...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGCTGGCCGTCTGTCTGTaGTCCACCTTCTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLLAVCL*STFCRK
Trigger: CTTACGACAGAAGGTGGAGCACAGACAGACGGCCAG...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000414461.6
ENST00000449924.6
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCTTTGTGTCTGTGACTaGTGGCCGTCTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACLCVCD*WPSVCA
Trigger: AGCACAGACAGACGGCCAGCAGTCACAGACACAAAG...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAACCTGCCTCTGGTGAAGTTGACCGTACGGAGTCTCAAAGTTCAAAAGGTGACTGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: QPASGEVDRTESQSSKGDCSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...GTCACCTTTTGAACTTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRCSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPECSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKCSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAAGCGGTGGCTGCGGTTaGAGTAGCAGGCTGTGCATA +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSSGGCG*SSRLCI
Trigger: TATGCACAGCCTGCTACTGCAACCGCAGCCACCGCT...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLNCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGATATAGAAGACCCTTaGCATCGCAGACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSADIEDP*HRRPSF
Trigger: GAAGGAGGGTCTGCGATGGCAAGGGTCTTCTATATC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCACGGCAGTGACTCACTaGGCGACTCTTTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSTAVTH*ATLSGD
Trigger: ATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGT...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAACCAGCTGAACTGAGATaGACTCAAGGTGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKPAELR*TQGASS
Trigger: GCTTGAGGCACCTTGAGTGCATCTCAGTTCAGCTGG...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEHHPWK*SRNHWK
Trigger: TTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTG...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGACAGACAAGCAGTGCTaGTTCGAGCAACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQTDKQC*FEQPAS
Trigger: AGAGGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGT...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGGGAACAGACAAGCAGTaGTGCTTCGAGCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLGTDKQ*CFEQPA
Trigger: GGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGTTCC...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGCATATCCTTGGGGTTaGTTCCATCCCTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGAYPWG*FHPCLM
Trigger: CATCAAACAGGGATGGAAGCAACCCCAAGGATATGC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTREGGSS*PSCISL
Trigger: CAAGGATATGCAAGAAGGGCATGATGAACCCCCTTC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTAAGGGCCCTGTTTCATaGTCTAGCTCTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAKGPVS*SSSWMA
Trigger: AGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTT...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCCATGTAATGCCCCCATaGCCCAAAGGTACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSHVMPP*PKGTCF
Trigger: AAAACAGGTACCTTTGGGGCATGGGGGCATTACATG...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCACAAAGCCCTGGGATaGTTCTCTGGAGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQHKALG*FSGVSR
Trigger: CCTGCTAACTCCAGAGAAGCATCCCAGGGCTTTGTG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGTGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLCVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTTGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRICVCDC*PSVCAP
Trigger: TGGAGCACAGACAGACGGCCAGCAGTCACAGACACA...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCATATCTCAGGCAGATaGCTGAAGGAAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSHISGR*LKEAPP
Trigger: GGGTGGGGCTTCCTTCAGCCATCTGCCTGAGATATG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR CCA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCAAATTCCTATGGCTTTaGAGCAAGTACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IASRPLASLTSPLVSGTAKFLWL*SKYKVP
Trigger: AGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTT...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATGGCTTGCCATCTTTTaGGAATGGCCCCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEWLAIF*EWPLCD
Trigger: ATCACAAAGGGGCCATTCCCAAAAGATGGCAAGCCA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGACTTCTTGCATATCCTTaGGGTTGCTTCCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRLLAYP*GCFHPC
Trigger: ACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAG...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTTCCAGTCTGTCCCTTaGTTGGCCTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGFQSVP*LALFSC
Trigger: GCAGGAGAACAAGGCCAACCAAGGGACAGACTGGAA...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGCAAGCAGCGGAGAACTaGCTGAACTTGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQQAAEN*LNLAKG
Trigger: GCCTTTTGCCAAGTTCAGCCAGTTCTCCGCTGCTTG...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCACCCAGAGCCTACTTaGAAAGGGCCCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCHPEPT*KGPCFM
Trigger: CATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTG...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAAACTCATGTACCCCCTaGGAAACTGGTGTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGNSCTP*ETGVGN
Trigger: GTTACCAACACCAGTTTCCCAGGGGGTACATGAGTT...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGGGCAATGGGAGGGGCTaGAGGAACAGCATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLGNGRG*RNSMLH
Trigger: ATGCAACATGCTGTTCCTCCAGCCCCTCCCATTGCC...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTAGAGAGAAGGCTAGGTaGTCGATTACACAAGCATCC +
Preference number: 4 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFREKAR*SITQAS
Trigger: GGATGCTTGTGTAATCGACCACCTAGCCTTCTCTCT...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAGAATCCATGATAACCTaGAGTCAGAGGCTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GDMRNSGKCLWAALWALRESMIT*SQRLVL
Trigger: CAGAACGAGCCTCTGACTCCAGGTTATCATGGATTC...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTACTACTTTGTGTCTGTaGCTGCTGGCCGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRITTLCL*LLAVCL
Trigger: CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATACTACTTTGTGTCTGTaGCTGCTGGCCGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHTTLCL*LLAVCL
Trigger: CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQIRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAACTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACTGTGGATAGAGAAGTaGCTCATAAAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRLWIEK*LIKALE
Trigger: TTCCAGAGCCTTTATGAGTCACTTCTCTATCCACAG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTCTGTGGATAGAGAAGTaGCTCATAAAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFALWIEK*LIKALE
Trigger: TTCCAGAGCCTTTATGAGTCACTTCTCTATCCACAG...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGACTGTGGATAGAGAAGTaGCTCATAAAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGLWIEK*LIKALE
Trigger: TTCCAGAGCCTTTATGAGTCACTTCTCTATCCACAG...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTGTTTTTGGAGGACAGTaGGAAGCTCAGCGGGATAGC +
Preference number: 4 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGVFGGQ*EAQRDS
Trigger: GCTATCCCGCTGAGCTTCTCACTGTCCTCCAAAAAC...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCATTCCCTAGAACTGTaGAAGCCCGCATCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIHSLEL*KPASHS
Trigger: GGAATGGGATGCGGGCTTTCACAGTTCTAGGGAATG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGTGGCCTAGTCTCCACTaGATACGTGGCTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLWPSLH*IRGLPS
Trigger: AGATGGCAAGCCACGTATTCAGTGGAGACTAGGCCA...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATCAGACTGTGGCTGTTaGAGGATGATGGTGATAGTA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRSDCGC*RMMVIV
Trigger: TACTATCACCATCATCCTTCAACAGCCACAGTCTGA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGTGCAAAGATTTGGACTaGAAAGCTCAGAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQCKDLD*KAQRLR
Trigger: CCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCA...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCTTTCAAAGCAGCCGTaGTGGGGCACACCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLLSKQP*WGTPPQ
Trigger: CTGTGGAGGTGTGCCCCAGCACGGCTGCTTTGAAAG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCTTTGTGTCTGTGACTaGTGGCCGTCTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVILCVCD*WPSVCA
Trigger: AGCACAGACAGACGGCCAGCAGTCACAGACACAAAG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVILPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLRYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGAGGTACCGCTCGGACTaGACCATATACTGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLRYRSD*TIYCPP
Trigger: GGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCT...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCATGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSACSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFATANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGAAGCAAAATCCTCCCTaGCCCCATTCCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGKQNPP*PHSLEL
Trigger: CAGTTCTAGGGAATGGGGGCAGGGAGGATTTTGCTT...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACCATCCCTGGAAATaGAGCAGAAACCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQIHHPWK*SRNHWK
Trigger: TTTCCAGTGGTTTCTGCTGCATTTCCAGGGATGGTG...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGGAACAGACAAGCAGTaGTGCTTCGAGCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSGTDKQ*CFEQPA
Trigger: GGCAGGTTGCTCGAAGCAGCACTGCTTGTCTGTTCC...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAAACAAACTCACGAAATaGCAGACTCCTCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRNKLTK*QTPLTL
Trigger: GAGAGTCAGAGGAGTCTGGCATTTCGTGAGTTTGTT...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAAAAGGGCCCTGTTTCATaGTCTAGCTCTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKKGPVS*SSSWMA
Trigger: AGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTT...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCTGTCAGCCCCAGGTTTaGTCCAGCTATTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCCQPQV*SSYSQA
Trigger: TGCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACA...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAAAGGTACCTGTTTTaGCATGGCAATGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIQRYLF*HGNGRG
Trigger: GCCCCTCCCATTGCCATGGCAAAACAGGTACCTTTG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCAAAGGTACCTGTTTTaGCATGGCAATGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGQRYLF*HGNGRG
Trigger: GCCCCTCCCATTGCCATGGCAAAACAGGTACCTTTG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATCACAAAGCCCTGGGATaGTTCTCTGGAGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHHKALG*FSGVSR
Trigger: CCTGCTAACTCCAGAGAAGCATCCCAGGGCTTTGTG...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAACATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAACATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLPLPLK*APLKAA
Trigger: AGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCAGGCCTCATGAACTaGGGGGCTGTCCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACPGLMN*GAVPFA
Trigger: TGCAAATGGGACAGCCCCCCAGTTCATGAGGCCTGG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAATCCTCAAGACATCTaGGGGAAATCTGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKNPQDI*GKSGHW
Trigger: CCAGTGACCAGATTTCCCCCAGATGTCTTGAGGATT...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTTAATGTGTACAAAGTaGTCCGGGTGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLMCTK*SGCSAG
Trigger: CCCCGCTGAGCACCCGGACCACTTTGTACACATTAA...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGG +
Preference number: 4 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGTLLPI*EGSNLR
Trigger: CCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGT...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAATGGCCAGTGGACTaGGCAGTTGGTGTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHKWPVD*AVGVPL
Trigger: TAAGGGGACACCAACTGCCCAGTCCACTGGCCATTT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAGTTAAACACCATCCCTaGAAATGCAGCAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKVKHHP*KCSRNH
Trigger: GTGGTTTCTGCTGCATTTCCAGGGATGGTGTTTAAC...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGCTCAATTCAGACTGTaGCTGTTGAAGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRAQFRL*LLKDDG
Trigger: ACCATCATCCTTCAACAGCCACAGTCTGAATTGAGC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATGGATGGCTATTGCCTaGCTGATCAGTAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKWMAIA*LISKAS
Trigger: ACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGTCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGSCSSS*MAIAWL
Trigger: CAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGA...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAATCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKSCSSS*MAIAWL
Trigger: CAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGA...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAAGGGACACATCTGCTTaGAAGCTGGATGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRRDTSA*KLDAAY
Trigger: ATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCT...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAGGGAAGCCAGGAATaGTTAAAGGAATGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: AGSLDGVWTLLKALISPQKGSQE*LKECKC
Trigger: ACACTTACATTCCTTTAATCATTCCTGGCTTCCCTT...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSALSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCGCGACTCTTTCTGGTaGTATAGAAGACCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGRDSFW*YRRPLP
Trigger: TGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTAGATGGCAACGGCAGTaGCTCACTGCGCGACTCTTT +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLRWQRQ*LTARLF
Trigger: AAAGAGTCGCGCAGTGAGTCACTGCCGTTGCCATCT...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACCCTAGTACCAATGTaGCTAGACCAGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLTLVPM*LDQGAK
Trigger: TTTGGCTCCCTGGTCTAGTCACATTGGTACTAGGGT...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAACTTACAAAGAATGCTTaGTGCTGTCATAGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKLTKNA*CCHRSV
Trigger: GACTGACCTATGACAGCATCAAGCATTCTTTGTAAG...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTTTAAACCTGAGAGCCTaGCAAATGGTGAATCACAAT +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSLNLRA*QMVNHN
Trigger: ATTGTGATTCACCATTTGTCAGGCTCTCAGGTTTAA...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGATCTACCGTTTTCCTaGGTAAACTGTAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGDLPFS*VNCNWL
Trigger: TAGCCAGTTACAGTTTACTCAGGAAAACGGTAGATC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTTGCTCGCCAGTGTaGGTGGAGTCCTCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAFCSPV*VESSGH
Trigger: GTGACCTGAGGACTCCACTCACACTGGCGAGCAAAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCACTAAGCTGGGAGTCTTaGCGGGGTATGGACATTGCT +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSLSWES*RGMDIA
Trigger: AGCAATGTCCATACCCCGTCAAGACTCCCAGCTTAG...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCATAATACAGCCAAAATaGGCTGCCAAAACAAGCACA +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPIIQPK*AAKTST
Trigger: TGTGCTTGTTTTGGCAGCTCATTTTGGCTGTATTAT...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATATGCATATCTGTAGGCTaGATATCCACCATAGAGGTC +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQICISVG*ISTIEV
Trigger: GACCTCTATGGTGGATATGCAGCCTACAGATATGCA...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGTGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQCSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGATGCAGTAGCAGGCTGTaGATATCTGTAGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRCSSRL*ISVGCI
Trigger: TATGCAGCCTACAGATATGCACAGCCTGCTACTGCA...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTCTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSLHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAGCTCCACCTTCTGTCTaGGTAAGAGATCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQIAPPSV*VRDPFC
Trigger: ACAAAATGGATCTCTTACGCAGACAGAAGGTGGAGC...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQITANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAGAGTCAGTAATAATTaGATCGAGGCCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPERVSNN*IEASSF
Trigger: GAAGCTAGAGGCCTCGATGCAATTATTACTGACTCT...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGACTGAATACGTGGCTTaGCATCTTTTGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGTEYVA*HLLGMA
Trigger: GGCCATTCCCAAAAGATGGCAAGCCACGTATTCAGT...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTACTGTGAAATCCAGATaGTTGCAAGAGCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSATVKSR*LQEPQF
Trigger: GAATTGGGGCTCTTGCAAGCATCTGGATTTCACAGT...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCATGTAATGCCCCCATaGCCCAAAGGTACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCHVMPP*PKGTCF
Trigger: AAAACAGGTACCTTTGGGGCATGGGGGCATTACATG...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCTGGTAAACCACACCTaGATAGGCGGGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLLVNHT*IGGDGC
Trigger: ACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR CCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCATTAATGTGTACAAAGTaGTCCGGGTGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSLMCTK*SGCSAG
Trigger: CCCCGCTGAGCACCCGGACCACTTTGTACACATTAA...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSTLLPI*EGSNLR
Trigger: CCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGT...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTTTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRILAAVP*VKGHPS
Trigger: ACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAA...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGCCATCTTTTGGGAATaGCCCCTTTGTGATCATGAC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNAIFWE*PLCDHD
Trigger: GTCATGATCACAAAGGGGCCATTCCCAAAAGATGGC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCTCTTAAAAGGTCTGTaGGAGCCGCCTTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVILLKGL*EPPSLP
Trigger: AGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGGCTCAATTCAGACTGTaGCTGTTGAAGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRAQFRL*LLKDDG
Trigger: ACCATCATCCTTCAACAGCCACAGTCTGAATTGAGC...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAATTCCAGTCTGTCCCTTaGTTGGCCTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKFQSVP*LALFSC
Trigger: GCAGGAGAACAAGGCCAACCAAGGGACAGACTGGAA...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGCAAGCAGCGGAGAACTaGCTGAACTTGGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKQAAEN*LNLAKG
Trigger: GCCTTTTGCCAAGTTCAGCCAGTTCTCCGCTGCTTG...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGACCAAGTCCCTCTGCTaGTGGCCTCCTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKTKSLC*WPPKRQ
Trigger: TTGCCTTTTAGGAGGCCACCAGCAGAGGGACTTGGT...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATAACTCATGTACCCCCTaGGAAACTGGTGTTGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNNSCTP*ETGVGN
Trigger: GTTACCAACACCAGTTTCCCAGGGGGTACATGAGTT...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTAGTCTTGACGGGGTATaGACATTGCTTAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFASLDGV*TLLKAL
Trigger: AAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTAGAGAGAAGGCTAGGTaGTCGATTACACAAGCATCC +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACREKAR*SITQAS
Trigger: GGATGCTTGTGTAATCGACCACCTAGCCTTCTCTCT...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAAGGGAAACAGGACCCTaGGCAAGCAGCTCGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVRETGP*ASSSGV
Trigger: GACACCCGAGCTGCTTGCCCAGGGTCCTGTTTCCCT...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGGGCTCCTGGTTACCCTaGGTTACCATTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQGSWLP*VTIFFF
Trigger: GAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCC...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTGGCTCCTGGTTACCCTaGGTTACCATTTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACGSWLP*VTIFFF
Trigger: GAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCC...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFAGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCAGAACCAGCTGAACTaGGATGCACTCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLQNQLN*DALKVP
Trigger: AGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTAGAAAGTCCAGGTCATaGACTATAGTAAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSRKSRS*TIVKLK
Trigger: TTTCAGCTTTACTATAGTTCATGACCTGGACTTTCT...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGTCAGACTGTGGCTGTTaGAGGATGATGGTGATAGTA +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQSDCGC*RMMVIV
Trigger: TACTATCACCATCATCCTTCAACAGCCACAGTCTGA...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAACTACCATGGCTGAATTaGTCTACCGTTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKLPWLN*STVFLS
Trigger: ACTCAGGAAAACGGTAGATCAATTCAGCCATGGTAG...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHKRLNH*VRSCCR
Trigger: CCGACAACAACTCCTGACGCAATGGTTCAGCCTTTT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTCTTTGTGTCTGTGACTaGTGGCCGTCTGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLALCVCD*WPSVCA
Trigger: AGCACAGACAGACGGCCAGCAGTCACAGACACAAAG...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTGCATATCTGTAGGCTaGATATCCACCATAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSCISVG*ISTIEV
Trigger: GACCTCTATGGTGGATATGCAGCCTACAGATATGCA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
CDS-3UTR GCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTAACTGCCCAAACATCTaGCGGAGGTCAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSNCPNI*RRSGSR
Trigger: CCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTT...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCGCTCCACCTTCTGTCTaGGTAAGAGATCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSAPPSV*VRDPFC
Trigger: ACAAAATGGATCTCTTACGCAGACAGAAGGTGGAGC...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRIDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGGAGCAAGTACAAAGTaGCTCTGCCTGCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSGASTK*LCLPFH
Trigger: ATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCC...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGCAATCTCAGGGCCTCTaGATTTTATGTCCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGQSQGL*ILCPVV
Trigger: CACTACAGGACATAAAATGCAGAGGCCCTGAGATTG...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTACGGCAGTGACTCACTaGGCGACTCTTTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSTAVTH*ATLSGD
Trigger: ATCACCAGAAAGAGTCGCGCAGTGAGTCACTGCCGT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAAACTGTGAAATCCAGATaGTTGCAAGAGCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKTVKSR*LQEPQF
Trigger: GAATTGGGGCTCTTGCAAGCATCTGGATTTCACAGT...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCAACAAACTCACGAAATaGCAGACTCCTCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCNKLTK*QTPLTL
Trigger: GAGAGTCAGAGGAGTCTGGCATTTCGTGAGTTTGTT...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGTTCTGCAAATGTTACTaGGCTAGAGGTTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQFCKCY*ARGCKQ
Trigger: CTGCTTGCAACCTCTAGCGCAGTAACATTTGCAGAA...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGTCCGTTACCAATCCCTaGCAACCAGCACTACCATGG +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLSVTNP*QPALPW
Trigger: CCATGGTAGTGCTGGTTGGCAGGGATTGGTAACGGA...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCATCTGCTTGAAAGCTaGATGCTGCATATAACTCCG +
Preference number: 4 (lower is better)
Translates to: CKHKFLSISMWIPATANQHLLES*MLHITP
Trigger: CGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCCTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFLDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTCTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTC +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSLDRRG*LLEVPL
Trigger: GAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAG...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCATCTGGGGGAAATCTaGTCACTGGCTTATTCACTT +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACHLGEI*SLAYSL
Trigger: AAGTGAATAAGCCAGTGACCAGATTTCCCCCAGATG...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ACTTTTCTGTCCCTGGGTCCTAAATTCCTGAATCTTATGGACATGAGAGCAGGGCATCTGGGGGAAATCTaGTCACTGGCTTATTCACTT +
Preference number: 4 (lower is better)
Translates to: TFLSLGPKFLNLMDMRAGHLGEI*SLAYSL
Trigger: AAGTGAATAAGCCAGTGACCAGATTTCCCCCAGATG...CCCTGCTCTCATGTCCATAAGATTCAGGAATTTAGGACCCAGGGACAGAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTTTAATGTGTACAAAGTaGTCCGGGTGCTCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLLMCTK*SGCSAG
Trigger: CCCCGCTGAGCACCCGGACCACTTTGTACACATTAA...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTCTCCACTGAATACGTaGCTTGCCATCTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSSPLNT*LAIFWE
Trigger: TTCCCAAAAGATGGCAAGCCACGTATTCAGTGGAGA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCCTATGGGCAGCTCTCTaGGCTCTAAGAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: KEKKPRRNARLQEQKEMILWAAL*ALRGTW
Trigger: CCATGTCCCTCTTAGAGCCCAGAGAGCTGCCCATAG...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGTCTGGAAAATGCCTATaGGCAGCTCTCTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKSGKCL*AALWAL
Trigger: TAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGA...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGGCTCAATTCAGACTGTaGCTGTTGAAGGATGATGGT +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQAQFRL*LLKDDG
Trigger: ACCATCATCCTTCAACAGCCACAGTCTGAATTGAGC...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTAGTCTGTCCCTTGGTTaGCCTTGTTCTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLASLSLG*PCSPAR
Trigger: TCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACT...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATTTCCTCCTAGTATCTaGGGGAAAATCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEFPPSI*GKICNS
Trigger: AGAATTGCAGATTTTCCCCCAGATACTAGGAGGAAA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
3UTR CAA 72 bp AATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTaGTCCCCCAGTCATTCAGCACCAGATACACTTTGG +
Preference number: 4 (lower is better)
Translates to: NILLQKDLFHFC*SPSHSAPDTLW
Trigger: CCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTCATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGCATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCTCCAGAGTTCATTCTaGGATCGGTTTCCTAATGAG +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLQSSF*DRFPNE
Trigger: CTCATTAGGAAACCGATCTCAGAATGAACTCTGGAG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCGCGACTCTTTCTGGTaGTATAGAAGACCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLRDSFW*YRRPLP
Trigger: TGGCAAGGGTCTTCTATATCACCAGAAAGAGTCGCG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGACCCTAGTACCAATGTaGCTAGACCAGGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLTLVPM*LDQGAK
Trigger: TTTGGCTCCCTGGTCTAGTCACATTGGTACTAGGGT...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SACGFQPQPTRIACQRPEFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTGGCCTAGTCTCCACTaGATACGTGGCTTGCCATCT +
Preference number: 4 (lower is better)
Translates to: KEKKPRRNARLQEQKEMIWPSLH*IRGLPS
Trigger: AGATGGCAAGCCACGTATTCAGTGGAGACTAGGCCA...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAACAGAACCAGCTGAACTaGGATGCACTCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKQNQLN*DALKVP
Trigger: AGGCACCTTGAGTGCATCTCAGTTCAGCTGGTTCTG...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGGGAGGTTGATACTGTaGAATCCAGATGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSGRLIL*NPDACK
Trigger: CTTGCAAGCATCTGGATTTCACAGTATCAACCTCCC...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAGAAAGTCCAGGTCATaGACTATAGTAAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQRKSRS*TIVKLK
Trigger: TTTCAGCTTTACTATAGTTCATGACCTGGACTTTCT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGATCTACCGTTTTCCTaGGTAAACTGTAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRDLPFS*VNCNWL
Trigger: TAGCCAGTTACAGTTTACTCAGGAAAACGGTAGATC...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATCTACCATGGCTGAATTaGTCTACCGTTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHLPWLN*STVFLS
Trigger: ACTCAGGAAAACGGTAGATCAATTCAGCCATGGTAG...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAACAGCACTACCATGGCTaGATTGATCTACCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKQHYHG*IDLPFS
Trigger: GGAAAACGGTAGATCAATTCAGCCATGGTAGTGCTG...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAATAGGAGTAACCCAATaGATACTGTATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKIGVTQ*ILYGLK
Trigger: TTTCAGACCATACAGTATTCATTGGGTTACTCCTAT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRIGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGGGGGCTGTCCCATTTaGAGGGGTCTCACGTCACTT +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSGGCPI*RGLTSL
Trigger: AAGTGACGTGAGACCCCTGCAAATGGGACAGCCCCC...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSALHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGCTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKLHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCTGGCCGTCTGTCTGTaGTCCACCTTCTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYLAVCL*STFCLR
Trigger: ACGCAGACAGAAGGTGGAGCACAGACAGACGGCCAG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATACTGTGAAATCCAGATaGTTGCAAGAGCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHTVKSR*LQEPQF
Trigger: GAATTGGGGCTCTTGCAAGCATCTGGATTTCACAGT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGAACAAACTCACGAAATaGCAGACTCCTCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLNKLTK*QTPLTL
Trigger: GAGAGTCAGAGGAGTCTGGCATTTCGTGAGTTTGTT...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCCTATCTTAAAACAGTaGAAACAGGTAACTTATGCT +
Preference number: 4 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPPILKQ*KQVTYA
Trigger: AGCATAAGTTACCTGTTTGCACTGTTTTAAGATAGG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTAAGGGCCCTGTTTCATaGTCTAGCTCTTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSKGPVS*SSSWMA
Trigger: AGCCATCCAAGAGCTAGAGCATGAAACAGGGCCCTT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTATTTGCAAAGAAAGGTaGCAGGGACTCTATTACACT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSAICKER*QGLYYT
Trigger: AGTGTAATAGAGTCCCTGGCACCTTTCTTTGCAAAT...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTTGCAAAGAAAGGTaGCAGGGACTCTATTACACT +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVICKER*QGLYYT
Trigger: AGTGTAATAGAGTCCCTGGCACCTTTCTTTGCAAAT...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGGGAAATCTGGTCACTaGCTTATTCACTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNGKSGH*LIHFSV
Trigger: GACAGAAAAGTGAATAAGCCAGTGACCAGATTTCCC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCGGGAAATCTGGTCACTaGCTTATTCACTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HKFLSISMWIPATANQNCGKSGH*LIHFSV
Trigger: GACAGAAAAGTGAATAAGCCAGTGACCAGATTTCCC...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTAGCAGCTGTCCCTTaGGTGAAAGGTCACCCTAGT +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLALAAVP*VKGHPS
Trigger: ACTAGGGTGACCTTTCACCCAAGGGACAGCTGCTAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAAGTCAAGAACATGTGTaGAGGCAGGAGTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: CRKISSTSACPPVIQHQISQEHV*RQELKT
Trigger: TGTTTTTAACTCCTGCCTCCACACATGTTCTTGACT...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGTCAAGAACATGTGTaGAGGCAGGAGTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: LSISMWIPATANQNCLSKSQEHV*RQELKT
Trigger: TGTTTTTAACTCCTGCCTCCACACATGTTCTTGACT...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTTGGATGGCTATTGCCTaGCTGATCAGTAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVIWMAIA*LISKAS
Trigger: ACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCA...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTGGATGGCTATTGCCTaGCTGATCAGTAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSWMAIA*LISKAS
Trigger: ACTTGCTTTACTGATCAGCCAGGCAATAGCCATCCA...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTTCATGCTCTAGCTCTTaGATGGCTATTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACSCSSS*MAIAWL
Trigger: CAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGA...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGACAGTTTCGGTAACATaGAAAAGAACTCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQTVSVT*KRTQLL
Trigger: TAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCACAGTTTCGGTAACATaGAAAAGAACTCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSTVSVT*KRTQLL
Trigger: TAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGT...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATAGAGGAGAGGTTCTGTaGCATTTTGAGCCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHRGEVL*HFEPCK
Trigger: TTTGCAAGGCTCAAAATGCCACAGAACCTCTCCTCT...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTCTGCTTTAAGGGTGGGTAATTaGTCTCTCTTTATACCGTTT +
Preference number: 4 (lower is better)
Translates to: LLVPQSFSTRYTLVILSALRVGN*SLFIPF
Trigger: AAACGGTATAAAGAGAGATCAATTACCCACCCTTAA...AGCAGACAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR TCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAATTATTATCCACTGTCTaGGAGCACGTTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQLLSTV*EHVWKY
Trigger: ATATTTCCAAACGTGCTCTCAGACAGTGGATAATAA...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAAAGTCCAGGTCATaGACTATAGTAAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQRKSRS*TIVKLK
Trigger: TTTCAGCTTTACTATAGTTCATGACCTGGACTTTCT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTCAGCACTACCATGGCTaGATTGATCTACCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAQHYHG*IDLPFS
Trigger: GGAAAACGGTAGATCAATTCAGCCATGGTAGTGCTG...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGAGATCCATTTTGTGTaGTGGGTGAGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLEIHFV*WVSCCS
Trigger: AGAGCAGCAACTCACCCAGCACACAAAATGGATCTC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGATTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNLHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp GGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGAAAACTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: GVLTGYGHCLKHLSVPRKLHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...TTTTCTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTGATCTCTTCCACTTCTaGTTGTCCCCCAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACDLFHF*LSPSHS
Trigger: TGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATC...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCAGAGTCAGTAATAATTaGATCGAGGCCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSRVSNN*IEASSF
Trigger: GAAGCTAGAGGCCTCGATGCAATTATTACTGACTCT...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGCATATCCTTGGGGTTaGTTCCATCCCTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLAYPWG*FHPCLM
Trigger: CATCAAACAGGGATGGAAGCAACCCCAAGGATATGC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGCTCTCTTCTCGCTTTaGAGCCCTAGCTTACGCGTG +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSALFSL*SPSLRV
Trigger: CACGCGTAAGCTAGGGCTGCAAAGCGAGAAGAGAGC...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: FLSISMWIPATANQNCLSPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTACCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCTATCTATCAGCATGTaGATTCCAGCCACAGCCAAC +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACLSISM*IPATAN
Trigger: GTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCGGGAAATCTGGTCACTaGCTTATTCACTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSGKSGH*LIHFSV
Trigger: GACAGAAAAGTGAATAAGCCAGTGACCAGATTTCCC...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGCCATCTTTTGGGAATaGCCCCTTTGTGATCATGAC +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLAIFWE*PLCDHD
Trigger: GTCATGATCACAAAGGGGCCATTCCCAAAAGATGGC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGTGGCTTGCCATCTTTTaGGAATGGCCCCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLWLAIF*EWPLCD
Trigger: ATCACAAAGGGGCCATTCCCAAAAGATGGCAAGCCA...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTTGGCTTGCCATCTTTTaGGAATGGCCCCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLWLAIF*EWPLCD
Trigger: ATCACAAAGGGGCCATTCCCAAAAGATGGCAAGCCA...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCTATGGGCAGCTCTCTaGGCTCTAAGAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYLWAAL*ALRGTW
Trigger: CCATGTCCCTCTTAGAGCCCAGAGAGCTGCCCATAG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTCTTCTTGCATATCCTTaGGGTTGCTTCCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSLLAYP*GCFHPC
Trigger: ACAGGGATGGAAGCAACCCCAAGGATATGCAAGAAG...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTACACCCAGAGCCTACTTaGAAAGGGCCCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVHPEPT*KGPCFM
Trigger: CATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTG...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGCCTGTCAGGACAGTTTCGGTAACATaGAAAAGAACTCAGCTACTA +
Preference number: 4 (lower is better)
Translates to: LQRFGLKSSETQVGQPVRTVSVT*KRTQLL
Trigger: TAGTAGCTGAGTTCTTTTCCATGTTACCGAAACTGT...CCTGACAGGCTGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTAGTCTTGACGGGGTATaGACATTGCTTAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRISLDGV*TLLKAL
Trigger: AAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTAGAGAGAAGGCTAGGTaGTCGATTACACAAGCATCC +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSREKAR*SITQAS
Trigger: GGATGCTTGTGTAATCGACCACCTAGCCTTCTCTCT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSMVVKG*TIASGV
Trigger: AACTCCTGACGCAATGGTTCAGCCTTTTACTACCAT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACACTACTTTGTGTCTGTaGCTGCTGGCCGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYTTLCL*LLAVCL
Trigger: CAGACAGACGGCCAGCAGTCACAGACACAAAGTAGT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCTGTCTGCTGATTTCTaGTCAGATGCATTTATCGGC +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACLSADF*SDAFIG
Trigger: GCCGATAAATGCATCTGATCAGAAATCAGCAGACAG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR TCA 90 bp CTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACCCTTTCATGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: LARAPILSVDTENQRPFHGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...ATGAAAGGGTCTTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCTCCAGAGTTCATTCTaGGATCGGTTTCCTAATGAG +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACLQSSF*DRFPNE
Trigger: CTCATTAGGAAACCGATCTCAGAATGAACTCTGGAG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAACTTACAAAGAATGCTTaGTGCTGTCATAGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKLTKNA*CCHRSV
Trigger: GACTGACCTATGACAGCATCAAGCATTCTTTGTAAG...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCGGGAGGTTGATACTGTaGAATCCAGATGCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: KEKKPRRNARLQEQKEMIGRLIL*NPDACK
Trigger: CTTGCAAGCATCTGGATTTCACAGTATCAACCTCCC...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTTAAACCTGAGAGCCTaGCAAATGGTGAATCACAAT +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLNLRA*QMVNHN
Trigger: ATTGTGATTCACCATTTGTCAGGCTCTCAGGTTTAA...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGAGGAGTCACACATTTaGGGAAAAGCTGCTATCGAT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLEESHI*GKAAID
Trigger: ATCGATAGCAGCTTTTCCTCAAATGTGTGACTCCTC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGATAATACAGCCAAAATaGGCTGCCAAAACAAGCACA +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLIIQPK*AAKTST
Trigger: TGTGCTTGTTTTGGCAGCTCATTTTGGCTGTATTAT...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGTGCAAAGATTTGGACTaGAAAGCTCAGAGACTCAGG +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLCKDLD*KAQRLR
Trigger: CCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCA...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLGILET*SRFGVD
Trigger: ATCTACCCCGAAACGGCTGCATGTCTCTAATATTCC...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCTCCCTGGCCCTGTCTaGATCAGCACTATTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYLPGPV*ISTILE
Trigger: TTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCCGGCTGTGTACACCCTaGCATAACCGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFRLCTP*HNRHCK
Trigger: CTTACAGTGACGGTTATGGCAGGGTGTACACAGCCG...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: RISCCRKISSTSACPPVILHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACGGAGCAAGTACAAAGTaGCTCTGCCTGCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYGASTK*LCLPFH
Trigger: ATGGAAGGGCAGGCAGAGGCACTTTGTACTTGCTCC...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCAATCTCAGGGCCTCTaGATTTTATGTCCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLQSQGL*ILCPVV
Trigger: CACTACAGGACATAAAATGCAGAGGCCCTGAGATTG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCTATCTTAAAACAGTaGAAACAGGTAACTTATGCT +
Preference number: 4 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAPILKQ*KQVTYA
Trigger: AGCATAAGTTACCTGTTTGCACTGTTTTAAGATAGG...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAACCTATCTTAAAACAGTaGAAACAGGTAACTTATGCT +
Preference number: 4 (lower is better)
Translates to: SYLSACGFQPQPTRIACQPILKQ*KQVTYA
Trigger: AGCATAAGTTACCTGTTTGCACTGTTTTAAGATAGG...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTATTTGCAAAGAAAGGTaGCAGGGACTCTATTACACT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRIICKER*QGLYYT
Trigger: AGTGTAATAGAGTCCCTGGCACCTTTCTTTGCAAAT...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFAPHTL*EFHSAE
Trigger: CTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGC...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGCCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: NSYLSACGFQPQPTRIACPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTACCCTCCTTCCAATATaGGAGGGCAGCAATCTCAGG +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSTLLPI*EGSNLR
Trigger: CCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGT...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAAGCCATCTTTTGGGAATaGCCCCTTTGTGATCATGAC +
Preference number: 4 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKAIFWE*PLCDHD
Trigger: GTCATGATCACAAAGGGGCCATTCCCAAAAGATGGC...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTTCTCCACTGAATACGTaGCTTGCCATCTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLSPLNT*LAIFWE
Trigger: TTCCCAAAAGATGGCAAGCCACGTATTCAGTGGAGA...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCAGTCTGTCCCTTGGTTaGCCTTGTTCTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFSLSLG*PCSPAR
Trigger: TCTGGCAGGAGAACAAGGCCAACCAAGGGACAGACT...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCACCCAGAGCCTACTTaGAAAGGGCCCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYHPEPT*KGPCFM
Trigger: CATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAAGCCTTGCAAAGATTTaGACTGAAAAGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSSLAKI*TEKLRD
Trigger: GTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCT...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTTTAAGGGTGGGTAATTaGTCTCTCTTTATACCGTTT +
Preference number: 4 (lower is better)
Translates to: STNSYLSACGFQPQPTRILRVGN*SLFIPF
Trigger: AAACGGTATAAAGAGAGATCAATTACCCACCCTTAA...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR TCA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAACATTTGCATATGGTGTaGCCATCTTCTTATTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKHLHMV*PSSYWS
Trigger: TGACCAATAAGAAGATGGTCACACCATATGCAAATG...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTTATTATCCACTGTCTaGGAGCACGTTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLLSTV*EHVWKY
Trigger: ATATTTCCAAACGTGCTCTCAGACAGTGGATAATAA...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGATAGGAGTAACCCAATaGATACTGTATGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLIGVTQ*ILYGLK
Trigger: TTTCAGACCATACAGTATTCATTGGGTTACTCCTAT...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGATTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: YLSACGFQPQPTRIACQRFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACAAGCAAAATCCTCCCTaGCCCCATTCCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYKQNPP*PHSLEL
Trigger: CAGTTCTAGGGAATGGGGGCAGGGAGGATTTTGCTT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYIVLSV*HPILCG
Trigger: CCCACAGAGTATGGGGTGCCACACACTCAAGACTAT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAACATCTGGGGGAAATCTaGTCACTGGCTTATTCACTT +
Preference number: 4 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKHLGEI*SLAYSL
Trigger: AAGTGAATAAGCCAGTGACCAGATTTCCCCCAGATG...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTCTCCACTGAATACGTaGCTTGCCATCTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: KEKKPRRNARLQEQKEMISPLNT*LAIFWE
Trigger: TTCCCAAAAGATGGCAAGCCACGTATTCAGTGGAGA...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCTCTGGAAAATGCCTATaGGCAGCTCTCTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFSGKCL*AALWAL
Trigger: TAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGA...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTAGCCTTGCAAAGATTTaGACTGAAAAGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLASLAKI*TEKLRD
Trigger: GTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCT...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTAGCCTTGCAAAGATTTaGACTGAAAAGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ERICILHNRSTPSQIYHSSLAKI*TEKLRD
Trigger: GTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCT...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTAGGAAGCCCCACCCCTaGATGCCTAAGGTAATTAAT +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSRKPHP*MPKVIN
Trigger: ATTAATTACCTTAGGCATTCAGGGGTGGGGCTTCCT...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405409.6
ENST00000618140.3
CDS-3UTR TCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTGGTAATTCTGTCTGCTaGTTTCTGATCAGATGCATT +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACGNSVC*FLIRCI
Trigger: AATGCATCTGATCAGAAATCAGCAGACAGAATTACC...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR GCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGCTACATCTAGGATTTTaGCAAACTGCCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLLHLGF*QTAQTS
Trigger: AGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAG...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAACAGCCAACCAGAATTaGCTGTCAAAGACCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVTANQN*LSKTRN
Trigger: GTTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGT...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAGGGGGTTCATCATaGCCTTCTTGCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSEGGSS*PSCISL
Trigger: CAAGGATATGCAAGAAGGGCATGATGAACCCCCTTC...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGATCTGGGGGAAAATCTaGAATTCTGCAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKIWGKI*NSANVT
Trigger: AGTAACATTTGCAGAATTGCAGATTTTCCCCCAGAT...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTAAATTCCTATGGCTTTaGAGCAAGTACAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QKTRRISCCRKISSTSACKFLWL*SKYKVP
Trigger: AGGCACTTTGTACTTGCTCCAAAGCCATAGGAATTT...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGTTTCCTCCTAGTATCTaGGGGAAAATCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: CFYQFYLTARRETLPPTLFPPSI*GKICNS
Trigger: AGAATTGCAGATTTTCCCCCAGATACTAGGAGGAAA...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTTTAAGGGTGGGTAATTaGTCTCTCTTTATACCGTTT +
Preference number: 4 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLLRVGN*SLFIPF
Trigger: AAACGGTATAAAGAGAGATCAATTACCCACCCTTAA...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
CDS-3UTR TCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTATTATCCACTGTCTaGGAGCACGTTTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLALLSTV*EHVWKY
Trigger: ATATTTCCAAACGTGCTCTCAGACAGTGGATAATAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTTCAGACTGTGGCTGTTaGAGGATGATGGTGATAGTA +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSSDCGC*RMMVIV
Trigger: TACTATCACCATCATCCTTCAACAGCCACAGTCTGA...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACGAGGAGTCACACATTTaGGGAAAAGCTGCTATCGAT +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYEESHI*GKAAID
Trigger: ATCGATAGCAGCTTTTCCTCAAATGTGTGACTCCTC...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTAGAGGAGAGGTTCTGTaGCATTTTGAGCCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSRGEVL*HFEPCK
Trigger: TTTGCAAGGCTCAAAATGCCACAGAACCTCTCCTCT...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCAAGGAATGTAAGTGTTaGTACCCCCTCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFKECKC*YPLFLI
Trigger: TATCAGGAAGAGGGGGTATCAACACTTACATTCCTT...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACCTTACAAAGAATGCTTaGTGCTGTCATAGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYLTKNA*CCHRSV
Trigger: GACTGACCTATGACAGCATCAAGCATTCTTTGTAAG...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTATTAAACCTGAGAGCCTaGCAAATGGTGAATCACAAT +
Preference number: 4 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVLNLRA*QMVNHN
Trigger: ATTGTGATTCACCATTTGTCAGGCTCTCAGGTTTAA...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCAGTCTTGACGGGGTATaGACATTGCTTAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFSLDGV*TLLKAL
Trigger: AAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACT...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACATAATACAGCCAAAATaGGCTGCCAAAACAAGCACA +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYIIQPK*AAKTST
Trigger: TGTGCTTGTTTTGGCAGCTCATTTTGGCTGTATTAT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTACCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR TCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCTTTAATTCAGGGACATaGGTCAGTTATCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFFNSGT*VSYQSR
Trigger: TCTTGACTGATAACTGACTCATGTCCCTGAATTAAA...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACATCTGGGGGAAAATCTaGAATTCTGCAAATGTTACT +
Preference number: 4 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYIWGKI*NSANVT
Trigger: AGTAACATTTGCAGAATTGCAGATTTTCCCCCAGAT...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CCA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCCCAACCATTTGCATATaGTGTGACCATCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFPTICI*CDHLLI
Trigger: AATAAGAAGATGGTCACACCATATGCAAATGGTTGG...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR GCA 90 bp CAATTCCAGCTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTTTTTCCTCTTCATCTTaGTATAGAGTTCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: QFQLLDNNRSNPMNTVWSFSSSS*YRVPLL
Trigger: TAGTAGAGGAACTCTATAGCAAGATGAAGAGGAAAA...AGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAGCTGGAATTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS CCA 90 bp CTCCTGGTTACCCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTaGAGTCAGAGGCTCGTTCTGCATCCCGCCGCCACCGTCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LLVTLAVPRWESMIT*SQRLVLHPAATVGR
Trigger: GCGGCCGACGGTGGCGGCGGGATGCAGAACGAGCCTCTGACTCCAGGTTATCATGGATTCCCAGCGCGGGACAGCCAGGGTAACCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS-3UTR CAA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCCGCGGCCGCCGCTCCTaGCCTGACCGCTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPRGRRS*PDRLLP
Trigger: GGGGAGCAAGCGGTCAGGCAAGGAGCGGCGGCCGCG...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS GCA 90 bp CACACCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTaGACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HTWIGGDGCWRYRSD*TIYCPPSAPQMGSS
Trigger: AGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
ENST00000625456.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000631365.2
CDS CCA 90 bp ATCTGTAGGCTGCATATCCACCCCTGGATAGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ICRLHIHPWIGGDGC*RYRSDCTIYCPPSA
Trigger: GGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAGCCTACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000618140.3
ENST00000626107.2
CDS-3UTR CAA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCATCCTTGCCTGACCGCTaGCTCCCCGCCCGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: FLSISMWIPATANQNCLSSLPDR*LPARPP
Trigger: GGGCGGGCGGGCGGGGAGCAAGCGGTCAGGCAAGGA...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS GCA 90 bp ATAACCGTCACTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGCTGCATATCC +
Preference number: 5 (lower is better)
Translates to: ITVTVSGCSGCSSGG*GCSSRLCISVGCIS
Trigger: GGATATGCAGCCTACAGATATGCACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGACGGTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000463509.1
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000630774.1
ENST00000631365.2
CDS GCA 90 bp TATTCCTGGATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTaGACCATATACTGTCCGCCCTCTGCCCCTCAAATGGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: YSWIGGDGCWRYRSD*TIYCPPSAPQMGSS
Trigger: AGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495377.6
ENST00000630250.2
CDS CCA 90 bp AAATCCGTCCTGGTAAACCACACCTGGATAGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KSVLVNHTWIGGDGC*RYRSDCTIYCPPSA
Trigger: GGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
ENST00000625456.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000631365.2
CDS-3UTR CAA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGTTGCGTCAGGAGTTGTaGTCGGCTCCTGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRLRQEL*SAPGYP
Trigger: AGGGTAACCAGGAGCCGACAACAACTCCTGACGCAA...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CATGTTGCATGTAGGGATGGTCCGGTCCCTGCCATGGGGAGTGGGGAGAAGAGGGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: HVACRDGPVPAMGSGEKRGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...CCTCTTCTCCCCACTCCCCATGGCAGGGACCGGACCATCCCTACATGCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GACCCTTGCCATCGCAGACCCTCCTTCCAATATGGGAGGGCAGCAATCTCAGGGCCTGGGAAACTGGTGTaGGTAACAAAGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: DPCHRRPSFQYGRAAISGPGKLV*VTKGRG
Trigger: CCCCCTGCCCTTTGTTACCAACACCAGTTTCCCAGG...CCCTGAGATTGCTGCCCTCCCATATTGGAAGGAGGGTCTGCGATGGCAAGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: IASRPLASLTSPLVSGTALLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCCAAAGGTACCTGTTTaGCCATGGCAATGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KPEGTRWLRTPRAYLERAPKVPV*PWQWEG
Trigger: CCCCTCCCATTGCCATGGCAAAACAGGTACCTTTGG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS GCA 90 bp CTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTGGCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: LRRWWKWDGSKRLNH*VRSCCRLLVTLAVP
Trigger: CGGGACAGCCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359369.8
ENST00000408983.2
ENST00000438146.7
ENST00000625456.2
ENST00000626165.1
ENST00000627872.2
CDS-3UTR CAA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCGCACAGAGCTTGCCTTaGGAGGCCTCAGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPAQSLP*EASART
Trigger: GGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGC...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAACCAGAGGGCACACGCTGGCTTAGGACACCCAGAGCCTACTTGGAAAGGGCCCTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: KPEGTRWLRTPRAYLERALPLVK*TVRSLK
Trigger: TTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAG...GGCCCTTTCCAAGTAGGCTCTGGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp ATTGCATCGAGGCCTCTAGCTTCCTTGACATCGCCCCTAGTTTCAGGCACAGCCGTCCCTTGGTTGGCCTaGTTCTCCTGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: IASRPLASLTSPLVSGTAVPWLA*FSCQRE
Trigger: TTCCCTCTGGCAGGAGAACAAGGCCAACCAAGGGAC...GGCTGTGCCTGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCTCGATGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCTGTCAGGGACAAGTACACTCCACCGGCTCTCTTCTCGCTTTGCAGCCCTAGCTTTCCAGTCTGTCCCTaGGTTGGCCTTGTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: PVRDKYTPPALFSLCSPSFPVCP*VGLVLL
Trigger: CAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAA...GCTAGGGCTGCAAAGCGAGAAGAGAGCCGGTGGAGTGTACTTGTCCCTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS TCA 90 bp CTGTGCTCCACCTTCTGTCGTAAGAGATCCATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCGTAGAG +
Preference number: 5 (lower is better)
Translates to: LCSTFCRKRSILCAG*VAALLPVGLRTSVE
Trigger: CTCTACGGAAGTACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTACGACAGAAGGTGGAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397305.3
ENST00000414461.6
ENST00000416721.6
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000619768.4
ENST00000626107.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS-3UTR CAA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: LSISMWIPATANQNCLSKRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: SYLSACGFQPQPTRIACQRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS CCA 90 bp GGCAGGAAGCACCCTTGGGGGCCGTTTCTGATCAACATGGTTCCTTaGAATTCTAGCCAGGATCTGGGCAAAGCTGTAAATCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GRKHPWGPFLINMVP*NSSQDLGKAVNPGH
Trigger: GTGGCCAGGATTTACAGCTTTGCCCAGATCCTGGCTAGAATTCCAAGGAACCATGTTGATCAGAAACGGCCCCCAAGGGTGCTTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS-3UTR CAA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGACTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAGCACAGAGCTTGCCTTaGGAGGCCTCAGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGAQSLP*EASART
Trigger: GGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGC...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GCTGGGAGTCTTGACGGGGTATGGACATTGCTTAAAGCACTTATCAGTCCCCAGCCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: AGSLDGVWTLLKALISPQPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...CTGGGGACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTCAAGACTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAACTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: SACGFQPQPTRIACQRPELAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LSISMWIPATANQNCLSKLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGGCCTCTAGCTTCCTaGACATCGCCCCTAGTTTCA +
Preference number: 5 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPRPLAS*TSPLVS
Trigger: TGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCT...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGACCTGGGAAACTGGTGTaGGTAACAAAGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRPGKLV*VTKGRG
Trigger: CCCCCTGCCCTTTGTTACCAACACCAGTTTCCCAGG...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTTGGAGGAACAGCATGTaGCATGTAGGGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSWRNSM*HVGMVR
Trigger: CCGGACCATCCCTACATGCAACATGCTGTTCCTCCA...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGTCAGTGCGCGGCCGCTaGCTCAGGCCGGGATCGGCT +
Preference number: 5 (lower is better)
Translates to: CFYQFYLTARRETLPPTLSVRGR*LRPGSA
Trigger: AGCCGATCCCGGCCTGAGCAAGCGGCCGCGCACTGA...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS TCA 90 bp ATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTGG +
Preference number: 5 (lower is better)
Translates to: IPFCGGGGNGMVVKG*TIASGVVVGSWLPW
Trigger: CCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359369.8
ENST00000408983.2
ENST00000438146.7
ENST00000625456.2
ENST00000626165.1
ENST00000627872.2
CDS TCA 90 bp ATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTGC +
Preference number: 5 (lower is better)
Translates to: IPFCGGGGNGMVVKG*TIASGVVVGSWLPC
Trigger: GCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397305.3
ENST00000629809.1
CDS GCA 90 bp CTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTGAGTTACCAT +
Preference number: 5 (lower is better)
Translates to: LRRWWKWDGSKRLNH*VRSCCRLLVTLSYH
Trigger: ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000449924.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
ENST00000627946.2
ENST00000629663.1
ENST00000631365.2
CDS GCA 90 bp CTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTGCTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LRRWWKWDGSKRLNH*VRSCCRLLVTLLSY
Trigger: ATAAGAGAGCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397305.3
ENST00000629809.1
CDS GCA 90 bp CTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCAGTTAGAATGC +
Preference number: 5 (lower is better)
Translates to: LRRWWKWDGSKRLNH*VRSCCRLLVTQLEC
Trigger: GCATTCTAACTGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473487.6
ENST00000627612.2
CDS-3UTR CAA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATTGCGTCAGGAGTTGTaGTCGGCTCCTGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKLRQEL*SAPGYP
Trigger: AGGGTAACCAGGAGCCGACAACAACTCCTGACGCAA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGACCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: HKFLSISMWIPATANQNCLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GTTAATGTGTACAAAGTGGTCCGGGTGCTCAGCGGGGTGTTTTTGGAGGACAGTCCTTCTTGCATATCCTaGGGGTTGCTTCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: VNVYKVVRVLSGVFLEDSPSCIS*GLLPSL
Trigger: CAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGG...ACTGTCCTCCAAAAACACCCCGCTGAGCACCCGGACCACTTTGTACACATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGCAGTCTGTCCCTTGGTaGGCCTTGTTCTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILQSVPW*ALFSCQ
Trigger: CTGGCAGGAGAACAAGGCCAACCAAGGGACAGACTG...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAAGATTCTGCCTCTCTTAAAAGGTCTGTGGGAGCCGCCTTCTCTACCTTTCCCATCACTGCTCCCTTTTaGCTCGCCAGTGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: QDSASLKRSVGAAFSTFPITAPF*LASVSG
Trigger: TCCACTCACACTGGCGAGCAAAAAGGGAGCAGTGAT...GGGAAAGGTAGAGAAGGCGGCTCCCACAGACCTTTTAAGAGAGGCAGAATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAGTGTCAGCCCCAGGTTaGCTCCAGCTATTCACAAGC +
Preference number: 5 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRVSAPG*LQLFTS
Trigger: GCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACAC...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGTGTCAGCCCCAGGTTaGCTCCAGCTATTCACAAGC +
Preference number: 5 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRVSAPG*LQLFTS
Trigger: GCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACAC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGATGGAGGAACAGCATGTaGCATGTAGGGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GDMRNSGKCLWAALWALRWRNSM*HVGMVR
Trigger: CCGGACCATCCCTACATGCAACATGCTGTTCCTCCA...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTTGGAGGAACAGCATGTaGCATGTAGGGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFAWRNSM*HVGMVR
Trigger: CCGGACCATCCCTACATGCAACATGCTGTTCCTCCA...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCCAAAGGTACCTGTTTaGCCATGGCAATGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQPKVPV*PWQWEG
Trigger: CCCCTCCCATTGCCATGGCAAAACAGGTACCTTTGG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS TCA 90 bp ATTCCATTCTGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCAGT +
Preference number: 5 (lower is better)
Translates to: IPFCGGGGNGMVVKG*TIASGVVVGSWLPS
Trigger: ACTGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473487.6
ENST00000627612.2
CDS-3UTR CAA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGTTGCGTCAGGAGTTGTaGTCGGCTCCTGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: LSISMWIPATANQNCLSKLRQEL*SAPGYP
Trigger: AGGGTAACCAGGAGCCGACAACAACTCCTGACGCAA...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTACCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: SLPLLLVPQSFSTRYTLVPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...TACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: FLSISMWIPATANQNCLSPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: HKFLSISMWIPATANQNCLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: SYLSACGFQPQPTRIACQGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGACTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRLPLVK*TVRSLK
Trigger: TTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAG...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAATTTCCAGTCTGTCCCTaGGTTGGCCTTGTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKFPVCP*VGLVLL
Trigger: CAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAA...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAACACCCAGAGCCTACTaGGAAAGGGCCCTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKTPRAY*ERALFH
Trigger: ATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGT...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAATCACTGCTCCCTTTTaGCTCGCCAGTGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRITAPF*LASVSG
Trigger: TCCACTCACACTGGCGAGCAAAAAGGGAGCAGTGAT...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GGCCCTGTTTCATGCTCTAGCTCTTGGATGGCTATTGCCTGGCTGATCAGTAAAACTAAGCTGGGAGTCTaGACGGGGTATGGACATTGC +
Preference number: 5 (lower is better)
Translates to: GPVSCSSSWMAIAWLISKTKLGV*TGYGHC
Trigger: GCAATGTCCATACCCCGTCAAGACTCCCAGCTTAGT...TTTACTGATCAGCCAGGCAATAGCCATCCAAGAGCTAGAGCATGAAACAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAAACAGTGCTTCATTACCATGTGCAAAGGCTGAGGCAGTGCTCCTCCTTCGCTACTAAGCTGGGAGTCTaGACGGGGTATGGACATTGC +
Preference number: 5 (lower is better)
Translates to: KTVLHYHVQRLRQCSSFATKLGV*TGYGHC
Trigger: GCAATGTCCATACCCCGTCAAGACTCCCAGCTTAGT...AGCGAAGGAGGAGCACTGCCTCAGCCTTTGCACATGGTAATGAAGCACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAGTGTCAGCCCCAGGTTaGCTCCAGCTATTCACAAGC +
Preference number: 5 (lower is better)
Translates to: FLSISMWIPATANQNCLSVSAPG*LQLFTS
Trigger: GCTTGTGAATAGCTGGAGCAAACCTGGGGCTGACAC...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS TCA 90 bp TCCCAACCACCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTaGAAGACTTCAGCCTTCCAGCTGAGTTACCATTTTCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SQPPRNRRANWQQLR*KTSAFQLSYHFLFL
Trigger: GAGAAAAAGAAAATGGTAACTCAGCTGGAAGGCTGAAGTCTTTCACCTGAGCTGCTGCCAGTTCGCTCTTCTGTTCCTGGGTGGTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397305.3
ENST00000629809.1
CDS-3UTR CAA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTTTGCGTCAGGAGTTGTaGTCGGCTCCTGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: NSYLSACGFQPQPTRIACLRQEL*SAPGYP
Trigger: AGGGTAACCAGGAGCCGACAACAACTCCTGACGCAA...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp AATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: NSYLSACGFQPQPTRIACPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...ACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATCCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGCTGCTCCCCGTGGGCTaGCGTACTTCCGTAGAGTGT +
Preference number: 5 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKLLPVG*RTSVEC
Trigger: ACACTCTACGGAAGTACGCAAGCCCACGGGGAGCAG...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGAGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: YLSACGFQPQPTRIACQRGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: LEEYPVAERSLPLLLVPQGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...CTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CAGCTTCCAAGAGTACAGAAAGTCCAGGTCATGAACTATAGTAAAGCTGAAAAAAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTG +
Preference number: 5 (lower is better)
Translates to: QLPRVQKVQVMNYSKAEKRRGWL*EVPLGL
Trigger: CAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCT...TTTTTCAGCTTTACTATAGTTCATGACCTGGACTTTCTGTACTCTTGGAAGCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATAAGGCCTCTAGCTTCCTaGACATCGCCCCTAGTTTCA +
Preference number: 5 (lower is better)
Translates to: CRKISSTSACPPVIQHQIRPLAS*TSPLVS
Trigger: TGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCT...TATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCTTCTTGCATATCCTaGGGGTTGCTTCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSAPSCIS*GLLPSL
Trigger: CAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGG...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTCAGTCTGTCCCTTGGTaGGCCTTGTTCTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: STNSYLSACGFQPQPTRIQSVPW*ALFSCQ
Trigger: CTGGCAGGAGAACAAGGCCAACCAAGGGACAGACTG...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGTGGCATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTCAGTCTGTCCCTTGGTaGGCCTTGTTCTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: CGILSLAKIWTEKLRDSGQSVPW*ALFSCQ
Trigger: CTGGCAGGAGAACAAGGCCAACCAAGGGACAGACTG...ACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAGGTTCTGTGGCATTTaGAGCCTTGCAAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPRFCGI*SLAKIW
Trigger: CCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCT...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS GCA 90 bp TGCCGGAGGTCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGATTTACTCTCTGAATTTTCACTACTT +
Preference number: 5 (lower is better)
Translates to: CRRSGSRKRKGILET*SRFGVDLLSEFSLL
Trigger: AAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS-3UTR CAA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTTTGCGTCAGGAGTTGTaGTCGGCTCCTGGTTACCCT +
Preference number: 5 (lower is better)
Translates to: RISCCRKISSTSACPPVILRQEL*SAPGYP
Trigger: AGGGTAACCAGGAGCCGACAACAACTCCTGACGCAA...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGCACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: YQHVDSSHSQPELPVKDQHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...CTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGACACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACTGCCTCTGGTGAAGTaGACCGTACGGAGTCTCAAA +
Preference number: 5 (lower is better)
Translates to: YLSACGFQPQPTRIACQRLPLVK*TVRSLK
Trigger: TTTGAGACTCCGTACGGTCAACTTCACCAGAGGCAG...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGATGCATATCCTTGGGGTaGCTTCCATCCCTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: GDMRNSGKCLWAALWALRCISLG*LPSLFD
Trigger: ATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGATGCATATCCTTGGGGTaGCTTCCATCCCTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGCISLG*LPSLFD
Trigger: ATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATACACCCAGAGCCTACTaGGAAAGGGCCCTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SSTSACPPVIQHQIHFGNTPRAY*ERALFH
Trigger: ATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGT...ATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATA +
Preference number: 5 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLLAGIV*SVWHPI
Trigger: TATGGGGTGCCACACACTCAAGACTATGCCGGCCAG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp ATTTTGAGCCTTGCAAAGATTTGGACTGAAAAGCTCAGAGACTCAGGTAGGTCAGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: ILSLAKIWTEKLRDSGRSGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...TGACCTACCTGAGTCTCTGAGCTTTTCAGTCCAAATCTTTGCAAGGCTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATACACTTTGGTAATTCTGCACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: PLLLVPQSFSTRYTLVILHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...CAGAATTACCAAAGTGTATCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGAGGCCTCTAGCTTCCTaGACATCGCCCCTAGTTTCA +
Preference number: 5 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLRPLAS*TSPLVS
Trigger: TGAAACTAGGGGCGATGTCAAGGAAGCTAGAGGCCT...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCGCACAGAGCTTGCCTTaGGAGGCCTCAGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: KEKKPRRNARLQEQKEMIAQSLP*EASART
Trigger: GGTTCTGGCTGAGGCCTCCAAAGGCAAGCTCTGTGC...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCATGCATATCCTTGGGGTaGCTTCCATCCCTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSACISLG*LPSLFD
Trigger: ATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTCCTTCTTGCATATCCTaGGGGTTGCTTCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: STNSYLSACGFQPQPTRIPSCIS*GLLPSL
Trigger: CAGGGATGGAAGCAACCCCAAGGATATGCAAGAAGG...AATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCTTGGTTGGCCTaGTTCTCCTGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLVPWLA*FSCQRE
Trigger: TTCCCTCTGGCAGGAGAACAAGGCCAACCAAGGGAC...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GAAAGGATATGTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGTCCCTTGGTTGGCCTaGTTCTCCTGCCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: ERICILHNRSTPSQIYHSVPWLA*FSCQRE
Trigger: TTCCCTCTGGCAGGAGAACAAGGCCAACCAAGGGAC...AGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATACATATCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGTCTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCACACCCAGAGCCTACTaGGAAAGGGCCCTGTTTCAT +
Preference number: 5 (lower is better)
Translates to: CLLISDQMHLSAPNVSPSTPRAY*ERALFH
Trigger: ATGAAACAGGGCCCTTTCCAAGTAGGCTCTGGGTGT...GGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGAGAGGAATCTGATAACTaGCTGCAGTCTGGTCTGTTA +
Preference number: 5 (lower is better)
Translates to: VAERSLPLLLVPQSFSTREESDN*LQSGLL
Trigger: TAACAGACCAGACTGCAGCAAGTTATCAGATTCCTC...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGATTCTTTACTACCATGGCTGAATaGATCTACCGTTTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PGTTDLGPGTLSFPSRFFTTMAE*IYRFPE
Trigger: CTCAGGAAAACGGTAGATCAATTCAGCCATGGTAGT...AAAGAATCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGTGATTGATAGAACTACCATGGCTGAATaGATCTACCGTTTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SAPNVSPSSLTASSVIDRTTMAE*IYRFPE
Trigger: CTCAGGAAAACGGTAGATCAATTCAGCCATGGTAGT...TCTATCAATCACGGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCTGGGAAACTGGTGTaGGTAACAAAGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: QKTRRISCCRKISSTSACPGKLV*VTKGRG
Trigger: CCCCCTGCCCTTTGTTACCAACACCAGTTTCCCAGG...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGACTGCCTCTTCCGACGGGGTATGGACATaGCTTAAAGCACTTATCAGT +
Preference number: 5 (lower is better)
Translates to: QMHLSAPNVSPSSLTASSDGVWT*LKALIS
Trigger: ACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTC...GGAAGAGGCAGTCAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAACTTCCAGGGACTACTGACCTAGGACCTGGTACTCTATCTTTCCCCAGCAGAAGGTTCTGTGGCATTTaGAGCCTTGCAAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: KLPGTTDLGPGTLSFPSRRFCGI*SLAKIW
Trigger: CCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCT...TCTGCTGGGGAAAGATAGAGTACCAGGTCCTAGGTCAGTAGTCCCTGGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TGCATATCCTTGGGGTTGCTTCCATCCCTGTTTGATGTCTCCCTCATGTCTGGAAGGTTCTGTGGCATTTaGAGCCTTGCAAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: CISLGLLPSLFDVSLMSGRFCGI*SLAKIW
Trigger: CCAAATCTTTGCAAGGCTCAAAATGCCACAGAACCT...TCCAGACATGAGGGAGACATCAAACAGGGATGGAAGCAACCCCAAGGATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS TCA 90 bp CACACCCGCCCACACACAGACGTACACACATGTAGACACAGGGACTaGCACAAACATAGACACACACATGGGAAGAAAATGTTTCAAACT +
Preference number: 5 (lower is better)
Translates to: HTRPHTDVHTCRHRD*HKHRHTHGKKMFQT
Trigger: AGTTTGAAACATTTTCTTCCCATGTGTGTGTCTATGTTTGTGTCAGTCCCTGTGTCTACATGTGTGTACGTCTGTGTGTGGGCGGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS-3UTR CAA 90 bp TGCTTTTATCAGTTCTATCTAACAGCTAGAAGAGAAACACTCCCTCCTACCTTGGGCACTGCTGCATCATaGCCTAGGGACACATCTGCT +
Preference number: 5 (lower is better)
Translates to: CFYQFYLTARRETLPPTLGTAAS*PRDTSA
Trigger: AGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC...CAAGGTAGGAGGGAGTGTTTCTCTTCTAGCTGTTAGATAGAACTGATAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAATCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: SACGFQPQPTRIACQRPESTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...TTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCACCAGATCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: VAERSLPLLLVPQSFSTRSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...TCTGGTGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp TGTAAGCACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGCACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: CKHKFLSISMWIPATANQHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...CTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTGCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GGTGACATGAGGAATTCTGGAAAATGCCTATGGGCAGCTCTCTGGGCTCTAAGAAAAATTCCTATGGCTTaGGAGCAAGTACAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: GDMRNSGKCLWAALWALRKIPMA*EQVQSA
Trigger: GGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTT...TCTTAGAGCCCAGAGAGCTGCCCATAGGCATTTTCCAGAATTCCTCATGTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGGGACTCTATTACACTCACTAAACCAGAGGGCACACGCTGGCTTAGGACACCCAATGCTGTAGGACACTaGCTTTTATCAGTTCTATCT +
Preference number: 5 (lower is better)
Translates to: RDSITLTKPEGTRWLRTPNAVGH*LLSVLS
Trigger: AGATAGAACTGATAAAAGCAAGTGTCCTACAGCATT...GGGTGTCCTAAGCCAGCGTGTGCCCTCTGGTTTAGTGAGTGTAATAGAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCATTCAGACTGTGGCTGTaGAAGGATGATGGTGATAGT +
Preference number: 5 (lower is better)
Translates to: FLSISMWIPATANQNCLSFRLWL*KDDGDS
Trigger: ACTATCACCATCATCCTTCAACAGCCACAGTCTGAA...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp ATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTCAGCAACTACCATGGCTGAATaGATCTACCGTTTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: ILLQKDLFHFCLSPSHSATTMAE*IYRFPE
Trigger: CTCAGGAAAACGGTAGATCAATTCAGCCATGGTAGT...TGCTGAATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGACTAAGCTGGGAGTCTaGACGGGGTATGGACATTGC +
Preference number: 5 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKTKLGV*TGYGHC
Trigger: GCAATGTCCATACCCCGTCAAGACTCCCAGCTTAGT...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCCAAAGGTACCTGTTTaGCCATGGCAATGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLPKVPV*PWQWEG
Trigger: CCCCTCCCATTGCCATGGCAAAACAGGTACCTTTGG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTTCCAGTCTGTCCCTaGGTTGGCCTTGTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAFPVCP*VGLVLL
Trigger: CAGGAGAACAAGGCCAACCAAGGGACAGACTGGAAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGATCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: YLSACGFQPQPTRIACQRSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...TCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTGCTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: LLISDQMHLSAPNVSPSSSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...GGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CACAAATTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCTCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: HKFLSISMWIPATANQNCSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...GCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp GTATTCTACACAACAGGTCAACGCCCTCTCAGATATATCACTCTGCTTACAAAGCACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: VFYTTGQRPLRYITLLTKHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...CTTTGTAAGCAGAGTGATATATCTGAGAGGGCGTTGACCTGTTGTGTAGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGACCAGAAAAATGCTGTAGGACACTaGCTTTTATCAGTTCTATCT +
Preference number: 5 (lower is better)
Translates to: QHVDSSHSQPELPVKDQKNAVGH*LLSVLS
Trigger: AGATAGAACTGATAAAAGCAAGTGTCCTACAGCATT...TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTTTCAGACTGTGGCTGTaGAAGGATGATGGTGATAGT +
Preference number: 5 (lower is better)
Translates to: RISCCRKISSTSACPPVIFRLWL*KDDGDS
Trigger: ACTATCACCATCATCCTTCAACAGCCACAGTCTGAA...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTCCCCCAGTCATTGAGGAATCTGATAACTaGCTGCAGTCTGGTCTGTTA +
Preference number: 5 (lower is better)
Translates to: RISCCRKISSTSACPPVIEESDN*LQSGLL
Trigger: TAACAGACCAGACTGCAGCAAGTTATCAGATTCCTC...AATGACTGGGGGACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCCCATTGCGTCAGGAGTaGTTGTCGGCTCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFPLRQE*LSAPGY
Trigger: GTAACCAGGAGCCGACAACAACTCCTGACGCAATGG...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTGATTTCTGATCAGATGCATTTATCGGCTCCTAATGTCTCTCCTTCCTCCTTGTCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: LISDQMHLSAPNVSPSSLSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...CAAGGAGGAAGGAGAGACATTAGGAGCCGATAAATGCATCTGATCAGAAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTCACAGCCAACCAGAATaGCCTGTCAAAGACCAGAAA +
Preference number: 5 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLHSQPE*PVKDQK
Trigger: TTTCTGGTCTTTGACAGGCAATTCTGGTTGGCTGTG...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000438146.7
ENST00000449924.6
ENST00000618140.3
ENST00000619768.4
ENST00000626107.2
CDS-3UTR CAA 90 bp AGATCTAACTACTCCGACCTTCACAATTCCAGCTACTTGATAATAATAGGAGTAATCACTGCTCCCTTTTaGCTCGCCAGTGTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RSNYSDLHNSSYLIIIGVITAPF*LASVSG
Trigger: TCCACTCACACTGGCGAGCAAAAAGGGAGCAGTGAT...TACTCCTATTATTATCAAGTAGCTGGAATTGTGAAGGTCGGAGTAGTTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAATCCAGATGCTTGCAAGAGCCCCAATTCTCAGTGTTGACACTGAAAACCAAAGACGGGGTATGGACATaGCTTAAAGCACTTATCAGT +
Preference number: 5 (lower is better)
Translates to: KSRCLQEPQFSVLTLKTKDGVWT*LKALIS
Trigger: ACTGATAAGTGCTTTAAGCAATGTCCATACCCCGTC...TTTGGTTTTCAGTGTCAACACTGAGAATTGGGGCTCTTGCAAGCATCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TTCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCACACAATTCCAGCTACTaGATAATAATAGGAGTAACC +
Preference number: 5 (lower is better)
Translates to: FLSISMWIPATANQNCLSHNSSY*IIIGVT
Trigger: GGTTACTCCTATTATTATCAAGTAGCTGGAATTGTG...TGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp TCCTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAACACAATTCCAGCTACTaGATAATAATAGGAGTAACC +
Preference number: 5 (lower is better)
Translates to: SYLSACGFQPQPTRIACQHNSSY*IIIGVT
Trigger: GGTTACTCCTATTATTATCAAGTAGCTGGAATTGTG...TTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTATCTATCAGCATGTGGATTCCAGCCACAGCCAACCAGAATTGCCTGTCAAAGCACAATTCCAGCTACTaGATAATAATAGGAGTAACC +
Preference number: 5 (lower is better)
Translates to: LSISMWIPATANQNCLSKHNSSY*IIIGVT
Trigger: GGTTACTCCTATTATTATCAAGTAGCTGGAATTGTG...CTTTGACAGGCAATTCTGGTTGGCTGTGGCTGGAATCCACATGCTGATAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp GTGCTTTTCTATTTCCTAATGCCTTCATTTGGGAAATGCTGTAGGACACTTGCTTTCAGACTGTGGCTGTaGAAGGATGATGGTGATAGT +
Preference number: 5 (lower is better)
Translates to: VLFYFLMPSFGKCCRTLAFRLWL*KDDGDS
Trigger: ACTATCACCATCATCCTTCAACAGCCACAGTCTGAA...AGCAAGTGTCCTACAGCATTTCCCAAATGAAGGCATTAGGAAATAGAAAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CTCAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGAGGAATCTGATAACTaGCTGCAGTCTGGTCTGTTA +
Preference number: 5 (lower is better)
Translates to: LRRLEEYPVAERSLPLLLEESDN*LQSGLL
Trigger: TAACAGACCAGACTGCAGCAAGTTATCAGATTCCTC...AAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp CAGAAGACTAGAAGAATATCCTGTTGCAGAAAGATCTCTTCCACTTCTGCTTGTAAAATTCCTATGGCTTaGGAGCAAGTACAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: QKTRRISCCRKISSTSACKIPMA*EQVQSA
Trigger: GGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTT...ACAAGCAGAAGTGGAAGAGATCTTTCTGCAACAGGATATTCTTCTAGTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS CCA 90 bp TGTGACAGAGACCAATGTCCTACAAAGCCAAAAATATTTACCACTTaGCCCTTTACGGAAAGTTTGCCAACTCAGATCTACATTTCATAC +
Preference number: 5 (lower is better)
Translates to: CDRDQCPTKPKIFTT*PFTESLPTQIYISY
Trigger: GTATGAAATGTAGATCTGAGTTGGCAAACTTTCCGTAAAGGGCCAAGTGGTAAATATTTTTGGCTTTGTAGGACATTGGTCTCTGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS-3UTR CAA 90 bp CTACTTGATAATAATAGGAGTAACCCAATGAATACTGTATGGTCTGAAAGCTACTCTACATCTAGGATTTaGCCAAACTGCCCAAACATC +
Preference number: 5 (lower is better)
Translates to: LLDNNRSNPMNTVWSESYSTSRI*PNCPNI
Trigger: GATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGA...GTAGCTTTCAGACCATACAGTATTCATTGGGTTACTCCTATTATTATCAAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCTTTTTCAAAATTCCTATGGCTTaGGAGCAAGTACAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: KKPRRNARLQEQKEMIFFKIPMA*EQVQSA
Trigger: GGCACTTTGTACTTGCTCCAAAGCCATAGGAATTTT...GAAAAAGATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS-3UTR CAA 90 bp AAGGAGAAGAAGCCTAGAAGGAATGCTAGGTTACAGGAACAAAAAGAAATGATCAATGCTGTAGGACACTaGCTTTTATCAGTTCTATCT +
Preference number: 5 (lower is better)
Translates to: KEKKPRRNARLQEQKEMINAVGH*LLSVLS
Trigger: AGATAGAACTGATAAAAGCAAGTGTCCTACAGCATT...GATCATTTCTTTTTGTTCCTGTAACCTAGCATTCCTTCTAGGCTTCTTCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405409.6
ENST00000438146.7
ENST00000618140.3
CDS TCA 90 bp AAATCTGTATGTGTTGACTTCAGATTCTCTAACGTGTTCTTGGATTaGTTCATTAATAAGAGACTACAGCATGTAACAGAAACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: KSVCVDFRFSNVFLD*FINKRLQHVTETSA
Trigger: AGCAGAGGTTTCTGTTACATGCTGTAGTCTCTTATTAATGAATCAATCCAAGAACACGTTAGAGAATCTGAAGTCAACACATACAGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS CCA 72 bp CCTCTCGCACTCCCGGAGCTCGCCCACCGGCCGCGCTaGCTCACACTCTCCCTCACAGCACGCCGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: PLALPELAHRPR*LTLSLTARRPR
Trigger: CCTCGGCCGGCGTGCTGTGAGGGAGAGTGTGAGCCAGCGCGGCCGGTGGGCGAGCTCCGGGAGTGCGAGAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS GCA 72 bp CCCTCTGCCCCTCAAATGGGCTCCTCTGAAAGCGGCTaGCGTGGTGGCTGCAGTAGGGTAAGGGAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PSAPQMGSSESG*RGGCSRVREAR
Trigger: CCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000631365.2
CDS CCA 72 bp ACCCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTaGAGTCAGAGGCTCGTTCTGCATCCCGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: TLAVPRWESMIT*SQRLVLHPAAT
Trigger: GGTGGCGGCGGGATGCAGAACGAGCCTCTGACTCCAGGTTATCATGGATTCCCAGCGCGGGACAGCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438146.7
CDS GCA 72 bp ACTGTAAGCGGCTGCAGCGGCTGCAGCAGCGGTGGCTaGGGTTGCAGTAGCAGGCTGTGCATATCTGTAGGC +
Preference number: 6 (lower is better)
Translates to: TVSGCSGCSSGG*GCSSRLCISVG
Trigger: GCCTACAGATATGCACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000463509.1
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000630774.1
ENST00000631365.2
CDS GCA 72 bp TGTGTACACCCTGCCATAACCGTCACTGTAAGCGGCTaGAGCGGCTGCAGCAGCGGTGGCTGCGGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: CVHPAITVTVSG*SGCSSGGCGCS
Trigger: ACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGACGGTTATGGCAGGGTGTACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000463509.1
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000630774.1
ENST00000631365.2
CDS CCA 72 bp ACTGCACCATATACTGTCCGCCCTCTGCCCCTCAAATaGGCTCCTCTGAAAGCGGCTGCCGTGGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TAPYTVRPLPLK*APLKAAAVVAA
Trigger: TGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000631365.2
CDS CCA 72 bp ACCCTGGCTGTCCCGCGCTGGGAATCCATGATAACCTaGAGTCAGAGGCTCGTTCTCACAGGGGTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: TLAVPRWESMIT*SQRLVLTGVPG
Trigger: CCCAGGAACCCCTGTGAGAACGAGCCTCTGACTCCAGGTTATCATGGATTCCCAGCGCGGGACAGCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408983.2
CDS GCA 72 bp ATAGGCGGGGATGGCTGTTGGAGGTACCGCTCGGACTaGACCATATACTGTCCGCCCTCTGCCCCTCAAATG +
Preference number: 6 (lower is better)
Translates to: IGGDGCWRYRSD*TIYCPPSAPQM
Trigger: CATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000631365.2
CDS CCA 72 bp CTGCATATCCACCCCTGGATAGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGCACCATATACTGTCCG +
Preference number: 6 (lower is better)
Translates to: LHIHPWIGGDGC*RYRSDCTIYCP
Trigger: CGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000618140.3
ENST00000626107.2
CDS CAA 72 bp GCTGCATATCCACCCCTGGATAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTGCACCATATACTGTCC +
Preference number: 6 (lower is better)
Translates to: AAYPPLDRRGWL*EVPLGLHHILS
Trigger: GGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGGGTGGATATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405409.6
ENST00000414461.6
ENST00000618140.3
ENST00000626107.2
CDS CAA 90 bp AAAATCCGTCCTGGTAAACCACACCTGGATAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTGCACCATATACTGTCCGCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: KIRPGKPHLDRRGWL*EVPLGLHHILSALC
Trigger: GCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
ENST00000625456.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000631365.2
CDS CCA 72 bp CTGGTAAACCACACCTGGATAGGCGGGGATGGCTGTTaGAGGTACCGCTCGGACTGCACCATATACTGTCCG +
Preference number: 6 (lower is better)
Translates to: LVNHTWIGGDGC*RYRSDCTIYCP
Trigger: CGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
ENST00000625456.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000631365.2
CDS CCA 72 bp TGTTGTCGGCTCCTGGTTACCCTGGCTGTCCCGCGCTaGGAATCCATGATAACCTGGAGTCAGAGGCTCGTT +
Preference number: 6 (lower is better)
Translates to: CCRLLVTLAVPR*ESMITWSQRLV
Trigger: AACGAGCCTCTGACTCCAGGTTATCATGGATTCCCAGCGCGGGACAGCCAGGGTAACCAGGAGCCGACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359369.8
ENST00000408983.2
ENST00000438146.7
ENST00000625456.2
ENST00000626165.1
ENST00000627872.2
CDS CCA 72 bp ATGCTCACCGGTCTGGCCGGCATAGTCTTGAGTGTGTaGCACCCCATACTCTGTGGGAATTCCATTCTGCGG +
Preference number: 6 (lower is better)
Translates to: MLTGLAGIVLSV*HPILCGNSILR
Trigger: CCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CCA 72 bp ATCCGTCCTGGTAAACCACACCTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTCGGACTGCACCATATA +
Preference number: 6 (lower is better)
Translates to: IRPGKPHLDRRG*LLEVPLGLHHI
Trigger: TATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000619768.4
ENST00000625456.2
ENST00000626598.2
ENST00000627872.2
ENST00000627946.2
ENST00000631365.2
CDS CAA 72 bp GTCTGCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTaGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCG +
Preference number: 6 (lower is better)
Translates to: VCVRDPFCVLGE*LLCSPWACVLP
Trigger: CGGAAGTACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTACGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397303.6
ENST00000405409.6
ENST00000408983.2
ENST00000438146.7
ENST00000618140.3
ENST00000625456.2
ENST00000626165.1
ENST00000626598.2
CDS CAA 90 bp TCCGTAGAGTGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATACTCTGTGGGAATTCCATTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVECQVMLTGLAGIV*SVWHPILCGNSILR
Trigger: CCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CAA 72 bp TGTCAGGTTATGCTCACCGGTCTGGCCGGCATAGTCTaGAGTGTGTGGCACCCCATACTCTGTGGGAATTCC +
Preference number: 6 (lower is better)
Translates to: CQVMLTGLAGIV*SVWHPILCGNS
Trigger: GGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CAA 72 bp TCTGTCGTAAGAGATCCATTTTGTGTGCTGGGTGAGTaGCTGCTCTGCTCCCCGTGGGCTTGCGTACTTCCG +
Preference number: 6 (lower is better)
Translates to: SVVRDPFCVLGE*LLCSPWACVLP
Trigger: CGGAAGTACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTACGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397305.3
ENST00000414461.6
ENST00000416721.6
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000619768.4
ENST00000626107.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CAA 72 bp CCTGTAAGACTATTCCTGGATAGGCGGGGATGGCTGTaGGAGGTACCGCTCGGACTGCACCATATACTGTCC +
Preference number: 6 (lower is better)
Translates to: PVRLFLDRRGWL*EVPLGLHHILS
Trigger: GGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGAATAGTCTTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495377.6
ENST00000630250.2
CDS TCA 72 bp TGCGGAGGTGGTGGAAATGGGATGGTAGTAAAAGGCTaGACCATTGCGTCAGGAGTTGTTGTCGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: CGGGGNGMVVKG*TIASGVVVGSW
Trigger: CCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS TCA 72 bp ACCTTCTGTCGTAAGAGATCCATTTTGTGTGCTGGGTaGGTTGCTGCTCTGCTCCCCGTGGGCTTGCGTACT +
Preference number: 6 (lower is better)
Translates to: TFCRKRSILCAG*VAALLPVGLRT
Trigger: AGTACGCAAGCCCACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTACGACAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397305.3
ENST00000414461.6
ENST00000416721.6
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000619768.4
ENST00000626107.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS GCA 72 bp TACCCCCTCTTCCTGATAGGGGCACTGCTGCATCATTaGCTAGGGACACATCTGCTTGAAAGCTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: YPLFLIGALLHH*LGTHLLESWML
Trigger: CAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000631365.2
CDS CCA 72 bp CGGCATAGTCTTGAGTGTGTGGCACCCCATACTCTGTaGGAATTCCATTCTGCGGAGGTGGTGGAAATGGGA +
Preference number: 6 (lower is better)
Translates to: RHSLECVAPHTL*EFHSAEVVEMG
Trigger: TCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CCA 72 bp TTGGTTCCTGTAAGACTATTCCTGGATAGGCGGGGATaGCTGTTGGAGGTACCGCTCGGACTGCACCATATA +
Preference number: 6 (lower is better)
Translates to: LVPVRLFLDRRG*LLEVPLGLHHI
Trigger: TATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGAATAGTCTTACAGGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495377.6
ENST00000630250.2
CDS TCA 72 bp CCCAGGAACAGAAGAGCGAACTGGCAGCAGCTCAGGTaGAAGACTTCAGCCTTCCAGCTGAGTTACCATTTT +
Preference number: 6 (lower is better)
Translates to: PRNRRANWQQLR*KTSAFQLSYHF
Trigger: AAAATGGTAACTCAGCTGGAAGGCTGAAGTCTTTCACCTGAGCTGCTGCCAGTTCGCTCTTCTGTTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397305.3
ENST00000629809.1
CDS GCA 72 bp TGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCTG +
Preference number: 6 (lower is better)
Translates to: WWKWDGSKRLNH*VRSCCRLLVTL
Trigger: CAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS GCA 72 bp TGGTGGAAATGGGATGGTAGTAAAAGGCTGAACCATTaGGTCAGGAGTTGTTGTCGGCTCCTGGTTACCCAG +
Preference number: 6 (lower is better)
Translates to: WWKWDGSKRLNH*VRSCCRLLVTQ
Trigger: CTGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473487.6
ENST00000627612.2
CDS TCA 72 bp GGCACTGCTGCATCATTGCCTAGGGACACATCTGCTTaGAAGCTGGATGCTGCATATAACTCCGGACCATAT +
Preference number: 6 (lower is better)
Translates to: GTAASLPRDTSA*KLDAAYNSGPY
Trigger: ATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000405409.6
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000495377.6
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000630250.2
ENST00000631365.2
CDS CCA 72 bp CTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCACCTTCTGTCTGCGTA +
Preference number: 6 (lower is better)
Translates to: LSEFSLLCVCDC*PSVCAPPSVCV
Trigger: TACGCAGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397303.6
ENST00000405409.6
ENST00000408983.2
ENST00000438146.7
ENST00000618140.3
ENST00000625456.2
ENST00000626165.1
ENST00000626598.2
CDS CCA 72 bp CTCTCTGAATTTTCACTACTTTGTGTCTGTGACTGCTaGCCGTCTGTCTGTGCTCCACCTTCTGTCGTAAGA +
Preference number: 6 (lower is better)
Translates to: LSEFSLLCVCDC*PSVCAPPSVVR
Trigger: TCTTACGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397305.3
ENST00000414461.6
ENST00000416721.6
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000619768.4
ENST00000626107.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS CCA 72 bp AATGGTAATGAATGGGAACATGGCAGGAAGCACCCTTaGGGGCCGTTTCTGATCAACATGGTTCCTTGGAAT +
Preference number: 6 (lower is better)
Translates to: NGNEWEHGRKHP*GPFLINMVPWN
Trigger: ATTCCAAGGAACCATGTTGATCAGAAACGGCCCCCAAGGGTGCTTCCTGCCATGTTCCCATTCATTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS GCA 72 bp TCAGGGTCCCGGAAGCGGAAAGGAATATTAGAGACATaGAGCCGTTTCGGGGTAGATTTACTCTCTGAATTT +
Preference number: 6 (lower is better)
Translates to: SGSRKRKGILET*SRFGVDLLSEF
Trigger: AAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000262829.11
ENST00000359369.8
ENST00000397303.6
ENST00000397305.3
ENST00000405409.6
ENST00000408983.2
ENST00000414461.6
ENST00000416721.6
ENST00000438146.7
ENST00000449924.6
ENST00000473487.6
ENST00000491982.1
ENST00000618140.3
ENST00000619768.4
ENST00000625456.2
ENST00000626107.2
ENST00000626165.1
ENST00000626598.2
ENST00000627612.2
ENST00000627872.2
ENST00000627946.2
ENST00000629663.1
ENST00000629809.1
ENST00000631365.2
CDS TCA 72 bp CCACACACAGACGTACACACATGTAGACACAGGGACTaGCACAAACATAGACACACACATGGGAAGAAAATG +
Preference number: 6 (lower is better)
Translates to: PHTDVHTCRHRD*HKHRHTHGKKM
Trigger: CATTTTCTTCCCATGTGTGTGTCTATGTTTGTGTCAGTCCCTGTGTCTACATGTGTGTACGTCTGTGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS CAA 72 bp AGACCAATGTCCTACAAAGCCAAAAATATTTACCACTaGGCCCTTTACGGAAAGTTTGCCAACTCAGATCTA +
Preference number: 6 (lower is better)
Translates to: RPMSYKAKNIYH*ALYGKFANSDL
Trigger: TAGATCTGAGTTGGCAAACTTTCCGTAAAGGGCCAAGTGGTAAATATTTTTGGCTTTGTAGGACATTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS CAA 72 bp CCAAAAATATTTACCACTTGGCCCTTTACGGAAAGTTaGCCAACTCAGATCTACATTTCATACTTGAGCAAA +
Preference number: 6 (lower is better)
Translates to: PKIFTTWPFTES*PTQIYISYLSK
Trigger: TTTGCTCAAGTATGAAATGTAGATCTGAGTTGGCAAACTTTCCGTAAAGGGCCAAGTGGTAAATATTTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1
CDS GCA 72 bp AAAGCATTTCAAGAGACAATCACAACAACAAATGCTTaGCACATGAGACAGGATATTTTTAAAAGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: KAFQETITTTNA*HMRQDIFKSGK
Trigger: TTTGCCACTTTTAAAAATATCCTGTCTCATGTGGCAAGCATTTGTTGTTGTGATTGTCTCTTGAAATGCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463509.1
ENST00000630774.1