RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBFA (Homo sapiens)

Ensembl gene IDs: ENSG00000101546

Ensembl transcript IDs: ENST00000262197.7, ENST00000306735.10, ENST00000586847.1, ENST00000591612.1, ENST00000593019.1

Found 351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTaGATCCAGTGGTCAGCACGGCAGGCCGCTCAGTGCTACGGGTCT +
Preference number: 1 (lower is better)
Translates to: VASSLAHSRCLQHVA*IQWSARQAAQCYGS
Trigger: AGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp CCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGTGGCCTaGCCCCTCGGGCCAAGCACTCACTGGCACCTGGCAGGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: PRFAGSVLTPATAVA*PLGPSTHWHLAGLC
Trigger: GCAGAGCCCTGCCAGGTGCCAGTGAGTGCTTGGCCCGAGGGGTCAGGCCACAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp TCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTaGTCAGCACGGCAGGCCGCTCAGTGCTACGGGTCTGCTATCCCT +
Preference number: 1 (lower is better)
Translates to: SLAHSRCLQHVAWIQ*SARQAAQCYGSAIP
Trigger: AGGGATAGCAGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp GCATGGCAGACTCTGTCTTTACTCTGCTGTGGCCCCCTCCAGCGCTaGTGCAAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAG +
Preference number: 1 (lower is better)
Translates to: AWQTLSLLCCGPLQR*CKHWPCSQPGSAVE
Trigger: CTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGTCTGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp TGGCAGACTCTGTCTTTACTCTGCTGTGGCCCCCTCCAGCGCTGGTaGAAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTA +
Preference number: 1 (lower is better)
Translates to: WQTLSLLCCGPLQRW*KHWPCSQPGSAVEV
Trigger: TACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGTCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp CTGTCTTTACTCTGCTGTGGCCCCCTCCAGCGCTGGTGCAAGCACTaGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAG +
Preference number: 1 (lower is better)
Translates to: LSLLCCGPLQRWCKH*PCSQPGSAVEVPAK
Trigger: CTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp CCTGACCTGCGAAGCACTCCTGCATGGCAGACTCTGTCTTTACTCTaGTGTGGCCCCCTCCAGCGCTGGTGCAAGCACTGGCCCTGTTCC +
Preference number: 1 (lower is better)
Translates to: PDLRSTPAWQTLSLL*CGPLQRWCKHWPCS
Trigger: GGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGTCTGCCATGCAGGAGTGCTTCGCAGGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp CCAGGTCCAGGTCATCTTCAACCTCCTCGCCTGACAGGTAACTCTTaGGGGAGCTGTCCTGCTCCAGGCGGGGCTTGGCCCTCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: PGPGHLQPPRLTGNS*GSCPAPGGAWPSSF
Trigger: GAAGGAAGAGGGCCAAGCCCCGCCTGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAAGATGACCTGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR GCA 90 bp CTGGATCCAGTGGTCAGCACGGCAGGCCGCTCAGTGCTACGGGTCTaGTATCCCTTGGACACTTCTCCTTTTTGGGGAGGAGGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: LDPVVSTAGRSVLRV*YPLDTSPFWGGGGR
Trigger: CCTGCCACCTCCTCCCCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp CAGCACGTGGCCTGGATCCAGTGGTCAGCACGGCAGGCCGCTCAGTaGTACGGGTCTGCTATCCCTTGGACACTTCTCCTTTTTGGGGAG +
Preference number: 1 (lower is better)
Translates to: QHVAWIQWSARQAAQ*YGSAIPWTLLLFGE
Trigger: CTCCCCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAGGCCACGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp ACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATaGCTTCCCTGTGCCGTCTTGATTCTCACAGCCCTGCTGCACTGG +
Preference number: 1 (lower is better)
Translates to: TPAPWAPVMCKCWDR*LPCAVLILTALLHW
Trigger: CCAGTGCAGCAGGGCTGTGAGAATCAAGACGGCACAGGGAAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp GCATCTCCTACTGTCCTTACCCCACACAGTGCACATGCAGCTTTCTaGGTAGTGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCAC +
Preference number: 1 (lower is better)
Translates to: ASPTVLTPHSAHAAF*VVASSLAHSRCLQH
Trigger: GTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGGACAGTAGGAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp TCACAAACCAGGAACCAAAAGGTCTCTGCTCCCCTTACCCTGGCCTaGGTGGCACAGGCCTGTCCTTCCTCTAGCTCTGTCCCTTCTCCC +
Preference number: 1 (lower is better)
Translates to: SQTRNQKVSAPLTLA*VAQACPSSSSVPSP
Trigger: GGGAGAAGGGACAGAGCTAGAGGAAGGACAGGCCTGTGCCACCCAGGCCAGGGTAAGGGGAGCAGAGACCTTTTGGTTCCTGGTTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp TCTTGCAGCAGCATCTCCTACTGTCCTTACCCCACACAGTGCACATaGAGCTTTCTGGGTAGTGGCCTCATCACTCGCCCACAGCCGCTG +
Preference number: 1 (lower is better)
Translates to: SCSSISYCPYPTQCT*SFLGSGLITRPQPL
Trigger: CAGCGGCTGTGGGCGAGTGATGAGGCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGGACAGTAGGAGATGCTGCTGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp CAAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTaGAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTC +
Preference number: 1 (lower is better)
Translates to: QALALFPARQCCGGT*KAGVLLFSHGVIMV
Trigger: GACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp GCCCGTCTCCAGGCCCAGGTGTCTTCAAACAGCAGGTGTTTCAGATaGACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAG +
Preference number: 1 (lower is better)
Translates to: ARLQAQVSSNSRCFR*TAKAERHCAGCWVQ
Trigger: CTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAAACACCTGCTGTTTGAAGACACCTGGGCCTGGAGACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp CACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATaGGCAGAGCCTCTCCATCTACTCCCTGCTTGCTCCGCAGCTGTG +
Preference number: 1 (lower is better)
Translates to: HMLRCVPMLFPANVG*AEPLHLLPACSAAV
Trigger: CACAGCTGCGGAGCAAGCAGGGAGTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR CCA 90 bp GAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTaGGATGGGCAGAGCCTCTCCATCTACTCCCTGCTTGCTCCGCAG +
Preference number: 1 (lower is better)
Translates to: EATCCVACQCFSLQM*DGQSLSIYSLLAPQ
Trigger: CTGCGGAGCAAGCAGGGAGTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR CCA 90 bp GGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTaGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCA +
Preference number: 1 (lower is better)
Translates to: GPVPSPAVLWRYLQS*RSAVFSWSHHGQVP
Trigger: TGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp CCAGGTGTCTTCAAACAGCAGGTGTTTCAGATGCACAGCCAAGGCTaGGAGGCATTGTGCTGGATGTTGGGTCCAGTCTTCTGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: PGVFKQQVFQMHSQG*EALCWMLGPVFWGP
Trigger: AGGCCCCCAGAAGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAAACACCTGCTGTTTGAAGACACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp TCAGCATCTTGCAGCAGCATCTCCTACTGTCCTTACCCCACACAGTaGACATGCAGCTTTCTGGGTAGTGGCCTCATCACTCGCCCACAG +
Preference number: 1 (lower is better)
Translates to: SASCSSISYCPYPTQ*TCSFLGSGLITRPQ
Trigger: CTGTGGGCGAGTGATGAGGCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGGACAGTAGGAGATGCTGCTGCAAGATGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp TCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGGCGTTCTaGTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGCCTTG +
Preference number: 1 (lower is better)
Translates to: SQPGSAVEVPAKLAF*CFLMESSWSSTRAL
Trigger: CAAGGCTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp GGACTTCACTGGATCAGTGCCTCCCTAACTTCTGGGTGTTTAGTGTaGGTGCACGTCATCTGGAGAGCTGCGGAAAATCCCCAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: GLHWISASLTSGCLV*VHVIWRAAENPQEW
Trigger: CCACTCCTGGGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCAGAAGTTAGGGAGGCACTGATCCAGTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp AGTGCCTCCCTAACTTCTGGGTGTTTAGTGTGCGTGCACGTCATCTaGAGAGCTGCGGAAAATCCCCAGGAGTGGATCATCCAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: SASLTSGCLVCVHVI*RAAENPQEWIIQGR
Trigger: CCTTCCCTGGATGATCCACTCCTGGGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCAGAAGTTAGGGAGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp GGGCCAAGCACTCACTGGCACCTGGCAGGGCTCTGCAGGTGGAGGTaGCCATGCCAGCATCTCAGAGACACTATTTTACCATTTTCTTTT +
Preference number: 1 (lower is better)
Translates to: GPSTHWHLAGLCRWR*PCQHLRDTILPFSF
Trigger: AAAAGAAAATGGTAAAATAGTGTCTCTGAGATGCTGGCATGGCCACCTCCACCTGCAGAGCCCTGCCAGGTGCCAGTGAGTGCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp GCAACTAAAGCCACTGCTGCTTCCACAGATTCTACTCCTGCACCGTaGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTCCCTGT +
Preference number: 1 (lower is better)
Translates to: ATKATAASTDSTPAP*APVMCKCWDRCLPC
Trigger: ACAGGGAAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGCAGCAGTGGCTTTAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp TGTTTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTaGGTCCAGTCTTCTGGGGGCCTACAAGGGGTGATTAAGTTCCCC +
Preference number: 1 (lower is better)
Translates to: CFRCTAKAERHCAGC*VQSSGGLQGVIKFP
Trigger: GGGGAACTTAATCACCCCTTGTAGGCCCCCAGAAGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp TCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATaGTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTAC +
Preference number: 1 (lower is better)
Translates to: SINCLNEATCCVACQ*FSLQMWDGQSLSIY
Trigger: GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR GCA 90 bp TTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTaGCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: FNSINCLNEATCCVA*QCFSLQMWDGQSLS
Trigger: GGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR GCA 90 bp TTCCTTATTTGGAAAATGAGAACAACTTTGCGAGACTGCTATGGATaGCAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: FLIWKMRTTLRDCYG*QHHIRHRRGGLGSS
Trigger: GCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp AGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTaGGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAG +
Preference number: 1 (lower is better)
Translates to: SRWFNSINCLNEATC*VACQCFSLQMWDGQ
Trigger: CTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR GCA 90 bp GGCCTCAGATTCCTTATTTGGAAAATGAGAACAACTTTGCGAGACTaGTATGGATGCCAACACCACATCCGGCACAGGCGTGGAGGTCTG +
Preference number: 1 (lower is better)
Translates to: GLRFLIWKMRTTLRD*YGCQHHIRHRRGGL
Trigger: CAGACCTCCACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGAATCTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp CAGATTCCTTATTTGGAAAATGAGAACAACTTTGCGAGACTGCTATaGATGCCAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: QIPYLENENNFARLL*MPTPHPAQAWRSGQ
Trigger: CTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp AAGGTTGATCTGAGGACTTCACTGGATCAGTGCCTCCCTAACTTCTaGGTGTTTAGTGTGCGTGCACGTCATCTGGAGAGCTGCGGAAAA +
Preference number: 1 (lower is better)
Translates to: KVDLRTSLDQCLPNF*VFSVRARHLESCGK
Trigger: TTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCAGAAGTTAGGGAGGCACTGATCCAGTGAAGTCCTCAGATCAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp AAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGG +
Preference number: 1 (lower is better)
Translates to: KSRWFNSINCLNEAT*CVACQCFSLQMWDG
Trigger: CCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR TCA 90 bp TCCAGTAACACCAGATACAAAAGGCCTTGGCCTGACCTCAGCCCATaGTGGTCCCCTAGAAGAATAAGAGGCAAACTGGTTGTTGTAAGC +
Preference number: 1 (lower is better)
Translates to: SSNTRYKRPWPDLSP*WSPRRIRGKLVVVS
Trigger: GCTTACAACAACCAGTTTGCCTCTTATTCTTCTAGGGGACCATCATGGGCTGAGGTCAGGCCAAGGCCTTTTGTATCTGGTGTTACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp GTGCTGTGGAGGTACCTGCAAAGCTGGCGTTCTGCTGTTTTCTCATaGAGTCATCATGGTCAAGTACCAGAGCCTTGTAACCTGAAGTTA +
Preference number: 1 (lower is better)
Translates to: VLWRYLQSWRSAVFS*SHHGQVPEPCNLKL
Trigger: TAACTTCAGGTTACAAGGCTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp AATAAAACACAGCCTGGGCACATCAGATGCATGCAAAGGTGTGTATaGAAAGGACACACCATTGAGGGCGTTCTCTCCTTCTTTAACACC +
Preference number: 1 (lower is better)
Translates to: NKTQPGHIRCMQRCV*KGHTIEGVLSFFNT
Trigger: GGTGTTAAAGAAGGAGAGAACGCCCTCAATGGTGTGTCCTTTGCATACACACCTTTGCATGCATCTGATGTGCCCAGGCTGTGTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 90 bp ACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTaGATTACCAAGGAACAGCGAACCAGAAGGCTGAAGTGGCCGACA +
Preference number: 1 (lower is better)
Translates to: TSKCSNVCRVAYWAI*ITKEQRTRRLKWPT
Trigger: TGTCGGCCACTTCAGCCTTCTGGTTCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 90 bp CCCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTaGGCCATCTGCATTACCAAGGAACAGCGAACCAGAAGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: PLSTSKCSNVCRVAY*AICITKEQRTRRLK
Trigger: CTTCAGCCTTCTGGTTCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp CACAGGGGCTGGGACATTAAGAGGGAAGCCGAACTAAATAGGAGCTaGCAAGGTATGGAATCTGTGTTTTCTCTTCTGATAAACAGCAAA +
Preference number: 1 (lower is better)
Translates to: HRGWDIKREAELNRS*QGMESVFSLLINSK
Trigger: TTTGCTGTTTATCAGAAGAGAAAACACAGATTCCATACCTTGTCAGCTCCTATTTAGTTCGGCTTCCCTCTTAATGTCCCAGCCCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp AATTTATTTCAGTATCTTGCCAGCACCCACAGCATTTATGATCTTTaGGGCCACAGTAGAGCAGCAGCACAGAAGGGTGACTATAGTCAA +
Preference number: 1 (lower is better)
Translates to: NLFQYLASTHSIYDL*GHSRAAAQKGDYSQ
Trigger: TTGACTATAGTCACCCTTCTGTGCTGCTGCTCTACTGTGGCCTCAAAGATCATAAATGCTGTGGGTGCTGGCAAGATACTGAAATAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 90 bp GTTTTCTCTTCTGATAAACAGCAAAACGAATCTTTGCGTCGGAGGTaGCACAAAGAATTCAGTATGACTCAGAGTCGCACACTCTTCAGA +
Preference number: 1 (lower is better)
Translates to: VFSSDKQQNESLRRR*HKEFSMTQSRTLFR
Trigger: TCTGAAGAGTGTGCGACTCTGAGTCATACTGAATTCTTTGTGTCACCTCCGACGCAAAGATTCGTTTTGCTGTTTATCAGAAGAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTTCTTACCCCGGCCACTaGTGTGGCCTGACCCCTCGG +
Preference number: 2 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSSYPGH*CGLTPR
Trigger: CCGAGGGGTCAGGCCACAGCAGTGGCCGGGGTAAGA...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCCCCCGGCCACTGCTGTaGCCTGACCCCTCGGGCCAA +
Preference number: 2 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAPRPLL*PDPSGQ
Trigger: TTGGCCCGAGGGGTCAGGCCACAGCAGTGGCCGGGG...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR TCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGTGCTGCACAAAGCTGTaGAGAGGCCAGTCAGGGACG +
Preference number: 2 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLCCTKL*RGQSGT
Trigger: CGTCCCTGACTGGCCTCTTCACAGCTTTGTGCAGCA...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTGTCATGTGCAAATGCTaGGACAGATGCCTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSVMCKC*DRCLPC
Trigger: ACAGGGAAGGCATCTGTCCCAGCATTTGCACATGAC...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGAGCCACATGCTGCGTTaGGTGCCAATGCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLSHMLR*VPMLFP
Trigger: AGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCT...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTCCCCTCCAGCGCTGGTaGAAGCACTGGCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSPLQRW*KHWPCS
Trigger: GGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGG...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTGGGTCTGCTATCCCTTaGACACTTCTCCTTTTTGGG +
Preference number: 2 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSGSAIP*TLLLFG
Trigger: CCCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCC...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR TCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTTCTTTGCGTCGGAGGTaGCACAAAGAATTCAGTATG +
Preference number: 2 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSSLRRR*HKEFSM
Trigger: CATACTGAATTCTTTGTGTCACCTCCGACGCAAAGA...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTCCACCAAGGTGGCTCTaGCCCGTCTCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVPPRWL*PVSRPR
Trigger: CCTGGGCCTGGAGACGGGCCAGAGCCACCTTGGTGG...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTTTTTCCCTGCAAATGTaGGATGGGCAGAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLFSLQM*DGQSLS
Trigger: GGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAA...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTGGGCCAAGCACTCACTaGCACCTGGCAGGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVGPSTH*HLAGLC
Trigger: GCAGAGCCCTGCCAGGTGCCAGTGAGTGCTTGGCCC...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTTGTTCTCCCCAGGTTTaGAGGTTCAGTTCTTACCCC +
Preference number: 2 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLCSPQV*RFSSYP
Trigger: GGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACA...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTCCTTACCCCACACAGTaGACATGCAGCTTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSPYPTQ*TCSFLG
Trigger: ACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGG...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGTCTGCTGTTTTCTCATaGAGTCATCATGGTCAAGTA +
Preference number: 2 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLSAVFS*SHHGQV
Trigger: TACTTGACCATGATGACTCCATGAGAAAACAGCAGA...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CAA 90 bp GATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTaGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: DGLTPSTASMKPHAA*RANAFPCKCGMGRA
Trigger: GGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR-3UTR TCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTTGCCCAACCTTGGCCTaGACCAGAAGGTGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVCPTLA*TRRWSL
Trigger: CAGGCTCCACCTTCTGGTTCAGGCCAAGGTTGGGCA...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGCATCTACTCCCTGCTTaGTCCGCAGCTGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: RRADGLTPSTASMKPHAAHLLPA*SAAVAI
Trigger: GATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATG...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR CAA 90 bp CTCTCCCTGGGCCTCAGATTCCTTATTTGGAAAATGAGAACAACTTaGCGAGACTGCTATGGATGCCAACACCACATCCGGCACAGGCGT +
Preference number: 2 (lower is better)
Translates to: LSLGLRFLIWKMRTT*RDCYGCQHHIRHRR
Trigger: ACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGAATCTGAGGCCCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACGACACTTCTCCTTTTTaGGGAGGAGGTGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNDTSPF*GGGGRA
Trigger: TGCCCTGCCACCTCCTCCCCAAAAAGGAGAAGTGTC...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTAGGTACCTGCAAAGCTaGCGTTCTGCTGTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSRYLQS*RSAVFS
Trigger: TGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCT...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR TCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTCTGACAGGTAACTCTTaGGGGAGCTGTCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SRRADGLTPSTASMKPHALTGNS*GSCPAP
Trigger: TGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAG...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTCAACCTCCTCGCCTaGCAGGTAACTCTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: RRADGLTPSTASMKPHAAFNLLA*QVTLEG
Trigger: TCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAA...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR-3UTR TCA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGTTACTACTTCAGGCGTaGTGGAACCACGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPELLLQA*WNHGQS
Trigger: GCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTAA...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATTCTCCATCTACTCCCTaGTTGCTCCGCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: SSRRADGLTPSTASMKPHSPSTP*LLRSCG
Trigger: GCCACAGCTGCGGAGCAAGCAGGGAGTAGATGGAGA...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR-3UTR GCA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGCTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGC +
Preference number: 2 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPELNEAT*CVACQC
Trigger: GCATTGGCACGCAACGCAGCATGTGGCTTCATTGAG...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTAGCAAAACGAATCTTTaGGTCGGAGGTGACACAAAG +
Preference number: 2 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSSKTNL*VGGDTK
Trigger: CTTTGTGTCACCTCCGACGCAAAGATTCGTTTTGCT...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACTGGGCACCTGTCATGTaGAAATGCTGGGACAGATGC +
Preference number: 2 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNWAPVM*KCWDRC
Trigger: GCATCTGTCCCAGCATTTGCACATGACAGGTGCCCA...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACCACAGATTCTACTCCTaGACCGTGGGCACCTGTCAT +
Preference number: 2 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNHRFYS*TVGTCH
Trigger: ATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTG...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACCTTTCTGCCCAACCTTaGCCTGAACCAGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNLSAQP*PEPEGG
Trigger: TCCACCTTCTGGTTCAGGCCAAGGTTGGGCAGAAAG...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGGCCAATGCTTTTCCCTaGAAATGTGGGATGGGCAGA +
Preference number: 2 (lower is better)
Translates to: RRADGLTPSTASMKPHAAANAFP*KCGMGR
Trigger: TCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGC...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR-3UTR GCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTACATGCTGCGTTGCGTaGCAATGCTTTTCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVTCCVA*QCFSLQ
Trigger: TTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGT...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTTGCTGTGGAGGTACCTaGAAAGCTGGCGTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSCCGGT*KAGVLL
Trigger: CAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCA...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTTTTGCGAGACTGCTATaGATGCCAACACCACATCCG +
Preference number: 2 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVFARLL*MPTPHP
Trigger: CGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAA...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR TCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTTCCTTATTTGGAAAATaGGAACAACTTTGCGAGACT +
Preference number: 2 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSSLFGK*EQLCET
Trigger: AGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGA...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCCTGTCATGTGCAAATaGTGGGACAGATGCCTTCCC +
Preference number: 2 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSPVMCK*WDRCLP
Trigger: GGGAAGGCATCTGTCCCAGCATTTGCACATGACAGG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCCTGCGAAGCACTCCTaGATGGCAGACTCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSPAKHS*MADSVF
Trigger: AAAGACAGAGTCTGCCATGCAGGAGTGCTTCGCAGG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR GCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCCCACACAGTGCACATaGAGCTTTCTGGGTAGTGGC +
Preference number: 2 (lower is better)
Translates to: STSKCSNVCRVAYWAICIPTQCT*SFLGSG
Trigger: GCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTACAGCTCACAGGGGCTaGGACATTAAGAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: STSKCSNVCRVAYWAICITAHRG*DIKREA
Trigger: GGCTTCCCTCTTAATGTCCCAGCCCCTGTGAGCTGT...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTTCTACTCCTGCACCGTaGGCACCTGTCATGTGCAAA +
Preference number: 2 (lower is better)
Translates to: STSKCSNVCRVAYWAICISTPAP*APVMCK
Trigger: TTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR TCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTCATCAACTGCCTCAATaGAGCCACATGCTGCGTTGC +
Preference number: 2 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVHQLPQ*SHMLRC
Trigger: GCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATG...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR-3UTR GCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTCTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGC +
Preference number: 2 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVLNEAT*CVACQC
Trigger: GCATTGGCACGCAACGCAGCATGTGGCTTCATTGAG...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR-3UTR GCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTACTTCACTGGATCAGTaGCTCCCTAACTTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: STSKCSNVCRVAYWAICITSLDQ*LPNFWV
Trigger: CACCCAGAAGTTAGGGAGGCACTGATCCAGTGAAGT...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCGAAGCACTCCTGCATaGCAGACTCTGTCTTTACTC +
Preference number: 2 (lower is better)
Translates to: STSKCSNVCRVAYWAICIRSTPA*QTLSLL
Trigger: GAGTAAAGACAGAGTCTGCCATGCAGGAGTGCTTCG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CAA 90 bp ATTAAGTTCCCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTaGCTTACTGGGCCATCTGCATTACCAAGGAACAGCGAACCAGAA +
Preference number: 2 (lower is better)
Translates to: IKFPCLPQNVLMFVE*LTGPSALPRNSEPE
Trigger: TTCTGGTTCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGGGAACTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTaGCCTGGATCCAGTGGTCAGCACGGCAGGCCGCTC +
Preference number: 3 (lower is better)
Translates to: PHHSPTAAVCST*PGSSGQHGRPL
Trigger: GAGCGGCCTGCCGTGCTGACCACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTaGTCAGCACGGCAGGCCGCTCAGTGCTACGGGTCT +
Preference number: 3 (lower is better)
Translates to: HSRCLQHVAWIQ*SARQAAQCYGS
Trigger: AGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp CTGTCTTTACTCTGCTGTGGCCCCCTCCAGCGCTGGTaGAAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: LSLLCCGPLQRW*KHWPCSQPGSA
Trigger: AGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp GGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGTaGCCTGACCCCTCGGGCCAAGCACTCACTGGCACC +
Preference number: 3 (lower is better)
Translates to: GLQVQFLPRPLL*PDPSGQALTGT
Trigger: GGTGCCAGTGAGTGCTTGGCCCGAGGGGTCAGGCCACAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp ACTCTGTCTTTACTCTGCTGTGGCCCCCTCCAGCGCTaGTGCAAGCACTGGCCCTGTTCCCAGCCCGGCAGT +
Preference number: 3 (lower is better)
Translates to: TLSLLCCGPLQR*CKHWPCSQPGS
Trigger: ACTGCCGGGCTGGGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp GCCTGGATCCAGTGGTCAGCACGGCAGGCCGCTCAGTaGTACGGGTCTGCTATCCCTTGGACACTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: AWIQWSARQAAQ*YGSAIPWTLLL
Trigger: AAGGAGAAGTGTCCAAGGGATAGCAGACCCGTAGCACTGAGCGGCCTGCCGTGCTGACCACTGGATCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp CGAAGCACTCCTGCATGGCAGACTCTGTCTTTACTCTaGTGTGGCCCCCTCCAGCGCTGGTGCAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: RSTPAWQTLSLL*CGPLQRWCKHW
Trigger: CCAGTGCTTGCACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGTCTGCCATGCAGGAGTGCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp GCAAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTaGAGGTACCTGCAAAGCTGGCGTTCTGCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: ASTGPVPSPAVL*RYLQSWRSAVF
Trigger: GAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp ACGGGCACCAAGGGAAAAGTGTTACTACTTCAGGCGTaGTGGAACCACGGTCAGAGCCGGGGTCGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: TGTKGKVLLLQA*WNHGQSRGRPG
Trigger: TCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTAACACTTTTCCCTTGGTGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp CCTTCCTGTGTCACAAACCAGGAACCAAAAGGTCTCTaGTCCCCTTACCCTGGCCTGGGTGGCACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: PSCVTNQEPKGL*SPYPGLGGTGL
Trigger: CAGGCCTGTGCCACCCAGGCCAGGGTAAGGGGAGCAGAGACCTTTTGGTTCCTGGTTTGTGACACAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CTCAGAGCAGTGCCTGACCTGCGAAGCACTCCTGCATaGCAGACTCTGTCTTTACTCTGCTGTGGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: LRAVPDLRSTPA*QTLSLLCCGPL
Trigger: GAGGGGGCCACAGCAGAGTAAAGACAGAGTCTGCCATGCAGGAGTGCTTCGCAGGTCAGGCACTGCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp ACTGTCCTTACCCCACACAGTGCACATGCAGCTTTCTaGGTAGTGGCCTCATCACTCGCCCACAGCCGCTGT +
Preference number: 3 (lower is better)
Translates to: TVLTPHSAHAAF*VVASSLAHSRC
Trigger: ACAGCGGCTGTGGGCGAGTGATGAGGCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp ACCAACCAGGTCCAGGTCATCTTCAACCTCCTCGCCTaGCAGGTAACTCTTGAGGGAGCTGTCCTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: TNQVQVIFNLLA*QVTLEGAVLLQ
Trigger: CTGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAAGATGACCTGGACCTGGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR CCA 72 bp GCCACTGCTGCTTCCACAGATTCTACTCCTGCACCGTaGGCACCTGTCATGTGCAAATGCTGGGACAGATGC +
Preference number: 3 (lower is better)
Translates to: ATAASTDSTPAP*APVMCKCWDRC
Trigger: GCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGCAGCAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTaGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGT +
Preference number: 3 (lower is better)
Translates to: PSPAVLWRYLQS*RSAVFSWSHHG
Trigger: ACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp TGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTaGGTCCAGTCTTCTGGGGGCCTACAAGGGGTGATT +
Preference number: 3 (lower is better)
Translates to: CTAKAERHCAGC*VQSSGGLQGVI
Trigger: AATCACCCCTTGTAGGCCCCCAGAAGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp AATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATTGCTCCAGGCGGGGCTaGGCCCTCTTCCTTCCCTTT +
Preference number: 3 (lower is better)
Translates to: NEATCCVACQCFSLQMWDCSRRG*ALFLPF
Trigger: AAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCA...ATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR-3UTR CAA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTAAGCCACATGCTGCGTaGCGTGCCAATGCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLKPHAA*RANAFP
Trigger: GGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTT...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTCTTCCCTGTGCCGTCTaGATTCTCACAGCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSLPCAV*ILTALL
Trigger: CAGCAGGGCTGTGAGAATCAAGACGGCACAGGGAAG...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATaGTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: CLNEATCCVACQ*FSLQMWDGQSL
Trigger: GAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR GCA 72 bp TGGGTGTTTAGTGTGCGTGCACGTCATCTGGAGAGCTaGGGAAAATCCCCAGGAGTGGATCATCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: WVFSVRARHLES*GKSPGVDHPGK
Trigger: CTTCCCTGGATGATCCACTCCTGGGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp TGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTaGGATGGGCAGAGCCTCTCCATCTACTCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: CCVACQCFSLQM*DGQSLSIYSLL
Trigger: AAGCAGGGAGTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR TCA 72 bp CCATCTGCATTACCAAGGAACAGCGAACCAGAAGGCTaGAGTGGCCGACAGTCTGGTTTTATGAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: PSALPRNSEPEG*SGRQSGFMSPQ
Trigger: CTGGGGGCTCATAAAACCAGACTGTCGGCCACTTCAGCCTTCTGGTTCGCTGTTCCTTGGTAATGCAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TGCAGCAGCATCTCCTACTGTCCTTACCCCACACAGTaGACATGCAGCTTTCTGGGTAGTGGCCTCATCACT +
Preference number: 3 (lower is better)
Translates to: CSSISYCPYPTQ*TCSFLGSGLIT
Trigger: AGTGATGAGGCCACTACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGGACAGTAGGAGATGCTGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TGGATCAGTGCCTCCCTAACTTCTGGGTGTTTAGTGTaGGTGCACGTCATCTGGAGAGCTGCGGAAAATCCC +
Preference number: 3 (lower is better)
Translates to: WISASLTSGCLV*VHVIWRAAENP
Trigger: GGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCAGAAGTTAGGGAGGCACTGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTAAGGGAGTCAGCATCTaGCAGCAGCATCTCCTACTG +
Preference number: 3 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSKGVSI*QQHLLL
Trigger: CAGTAGGAGATGCTGCTGCAAGATGCTGACTCCCTT...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp ATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTaGCAATGCTTTTCCCTGCAAATGTGGGATGGGCAG +
Preference number: 3 (lower is better)
Translates to: INCLNEATCCVA*QCFSLQMWDGQ
Trigger: CTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR GCA 72 bp GGCAGTGCTGTGGAGGTACCTGCAAAGCTGGCGTTCTaGTGTTTTCTCATGGAGTCATCATGGTCAAGTACC +
Preference number: 3 (lower is better)
Translates to: GSAVEVPAKLAF*CFLMESSWSST
Trigger: GGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp CAGCCTGGGCACATCAGATGCATGCAAAGGTGTGTATaGAAAGGACACACCATTGAGGGCGTTCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: QPGHIRCMQRCV*KGHTIEGVLSF
Trigger: GAAGGAGAGAACGCCCTCAATGGTGTGTCCTTTGCATACACACCTTTGCATGCATCTGATGTGCCCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TGGAAAATGAGAACAACTTTGCGAGACTGCTATGGATaGCAACACCACATCCGGCACAGGCGTGGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: WKMRTTLRDCYG*QHHIRHRRGGL
Trigger: CAGACCTCCACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CTAACTTCTGGGTGTTTAGTGTGCGTGCACGTCATCTaGAGAGCTGCGGAAAATCCCCAGGAGTGGATCATC +
Preference number: 3 (lower is better)
Translates to: LTSGCLVCVHVI*RAAENPQEWII
Trigger: GATGATCCACTCCTGGGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCACACTAAACACCCAGAAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTCCATCTACTCCCTGCTaGCTCCGCAGCTGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: SRRADGLTPSTASMKPHAPSTPC*LRSCGH
Trigger: ATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATGG...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262197.7
3UTR TCA 72 bp TTCAAACAGCAGGTGTTTCAGATGCACAGCCAAGGCTaGGAGGCATTGTGCTGGATGTTGGGTCCAGTCTTC +
Preference number: 3 (lower is better)
Translates to: FKQQVFQMHSQG*EALCWMLGPVF
Trigger: GAAGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAAACACCTGCTGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp GCTCACAAGGTTGATCTGAGGACTTCACTGGATCAGTaGCTCCCTAACTTCTGGGTGTTTAGTGTGCGTGCA +
Preference number: 3 (lower is better)
Translates to: AHKVDLRTSLDQ*LPNFWVFSVRA
Trigger: TGCACGCACACTAAACACCCAGAAGTTAGGGAGGCACTGATCCAGTGAAGTCCTCAGATCAACCTTGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CAGACATGTACACCCCTTCACTGGACACCCCGCAACTaGCTACCAGAAACCCTAGAGATAAACATTTGGCTC +
Preference number: 3 (lower is better)
Translates to: QTCTPLHWTPRN*LPETLEINIWL
Trigger: GAGCCAAATGTTTATCTCTAGGGTTTCTGGTAGCCAGTTGCGGGGTGTCCAGTGAAGGGGTGTACATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACCTGTTCTCCCCAGGTTaGCAGGTTCAGTTCTTACCC +
Preference number: 3 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNLFSPG*QVQFLP
Trigger: GGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAG...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGCGGGTCTGCTATCCCTaGGACACTTCTCCTTTTTGG +
Preference number: 3 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPERVCYP*DTSPFW
Trigger: CCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCCG...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp ACCAGATACAAAAGGCCTTGGCCTGACCTCAGCCCATaGTGGTCCCCTAGAAGAATAAGAGGCAAACTGGTT +
Preference number: 3 (lower is better)
Translates to: TRYKRPWPDLSP*WSPRRIRGKLV
Trigger: AACCAGTTTGCCTCTTATTCTTCTAGGGGACCATCATGGGCTGAGGTCAGGCCAAGGCCTTTTGTATCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp TATTTGGAAAATGAGAACAACTTTGCGAGACTGCTATaGATGCCAACACCACATCCGGCACAGGCGTGGAGG +
Preference number: 3 (lower is better)
Translates to: YLENENNFARLL*MPTPHPAQAWR
Trigger: CCTCCACGCCTGTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTTCCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTGCAAAGGACACACCATaGAGGGCGTTCTCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVAKDTP*RAFSPS
Trigger: AGAAGGAGAGAACGCCCTCAATGGTGTGTCCTTTGC...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTaGGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGG +
Preference number: 3 (lower is better)
Translates to: FNSINCLNEATC*VACQCFSLQMW
Trigger: CCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR GCA 72 bp TGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATG +
Preference number: 3 (lower is better)
Translates to: WFNSINCLNEAT*CVACQCFSLQM
Trigger: CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR CCA 72 bp AGGTACCTGCAAAGCTGGCGTTCTGCTGTTTTCTCATaGAGTCATCATGGTCAAGTACCAGAGCCTTGTAAC +
Preference number: 3 (lower is better)
Translates to: RYLQSWRSAVFS*SHHGQVPEPCN
Trigger: GTTACAAGGCTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp AATCTTTGCGTCGGAGGTGACACAAAGAATTCAGTATaGCTCAGAGTCGCACACTCTTCAGAAGGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: NLCVGGDTKNSV*LRVAHSSEGKD
Trigger: GTCTTTGCCTTCTGAAGAGTGTGCGACTCTGAGTCATACTGAATTCTTTGTGTCACCTCCGACGCAAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp GTGACAGGTACTTGTAAAAAGCTCACAAGGTTGATCTaGGGACTTCACTGGATCAGTGCCTCCCTAACTTCT +
Preference number: 3 (lower is better)
Translates to: VTGTCKKLTRLI*GLHWISASLTS
Trigger: AGAAGTTAGGGAGGCACTGATCCAGTGAAGTCCTCAGATCAACCTTGTGAGCTTTTTACAAGTACCTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp AGAACAATAAAACACAGCCTGGGCACATCAGATGCATaGAAAGGTGTGTATGCAAAGGACACACCATTGAGG +
Preference number: 3 (lower is better)
Translates to: RTIKHSLGTSDA*KGVYAKDTPLR
Trigger: CCTCAATGGTGTGTCCTTTGCATACACACCTTTGCATGCATCTGATGTGCCCAGGCTGTGTTTTATTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR GCA 72 bp TGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTaGATTACCAAGGAACAGCGAACCAGAAGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: CSNVCRVAYWAI*ITKEQRTRRLK
Trigger: CTTCAGCCTTCTGGTTCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp TGTTTCACCTTTGGATGGATTAGAAAATACACTAGCTaGCCACGGGCACCAAGGGAAAAGTGTTACTACTTC +
Preference number: 3 (lower is better)
Translates to: CFTFGWIRKYTS*PRAPREKCYYF
Trigger: GAAGTAGTAACACTTTTCCCTTGGTGCCCGTGGCCAGCTAGTGTATTTTCTAATCCATCCAAAGGTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp TCTGATAAACAGCAAAACGAATCTTTGCGTCGGAGGTaGCACAAAGAATTCAGTATGACTCAGAGTCGCACA +
Preference number: 3 (lower is better)
Translates to: SDKQQNESLRRR*HKEFSMTQSRT
Trigger: TGTGCGACTCTGAGTCATACTGAATTCTTTGTGTCACCTCCGACGCAAAGATTCGTTTTGCTGTTTATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp ACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTaGGCCATCTGCATTACCAAGGAACAGCGAACCAGA +
Preference number: 3 (lower is better)
Translates to: TSKCSNVCRVAY*AICITKEQRTR
Trigger: TCTGGTTCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTGTAAGCCAGGGAGATTaGCCATTTGTCACTGCAGTA +
Preference number: 3 (lower is better)
Translates to: STSKCSNVCRVAYWAICIVSQGD*PFVTAV
Trigger: TACTGCAGTGACAAATGGCAAATCTCCCTGGCTTAC...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGGATGGGGAGGTCTCTaGTACATAAATGAATTCACA +
Preference number: 3 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSGWGGL*YINEFT
Trigger: TGTGAATTCATTTATGTACAAGAGACCTCCCCATCC...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp TGGGACATTAAGAGGGAAGCCGAACTAAATAGGAGCTaGCAAGGTATGGAATCTGTGTTTTCTCTTCTGATA +
Preference number: 3 (lower is better)
Translates to: WDIKREAELNRS*QGMESVFSLLI
Trigger: TATCAGAAGAGAAAACACAGATTCCATACCTTGTCAGCTCCTATTTAGTTCGGCTTCCCTCTTAATGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CCA 72 bp CAAAATACACTCAAGCCCTCTCTCCTTCAAGGCAGCTaGCAAATTTTCAAAGTACCTCAAGTTTCTGATGTA +
Preference number: 3 (lower is better)
Translates to: QNTLKPSLLQGS*QIFKVPQVSDV
Trigger: TACATCAGAAACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAGTGTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR-3UTR CAA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTAAAATGAGAACAACTTaGCGAGACTGCTATGGATGC +
Preference number: 3 (lower is better)
Translates to: STSKCSNVCRVAYWAICIKMRTT*RDCYGC
Trigger: GCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTT...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR TCA 72 bp GGAGTCATCATGGTCAAGTACCAGAGCCTTGTAACCTaGAGTTATCTTGCTAGGGAAATACAAAAACGTTTT +
Preference number: 3 (lower is better)
Translates to: GVIMVKYQSLVT*SYLAREIQKRF
Trigger: AAAACGTTTTTGTATTTCCCTAGCAAGATAACTTCAGGTTACAAGGCTCTGGTACTTGACCATGATGACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTTTGTGGTCGGCTCTGTaGTGCCGCAGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSLWSAL*CRRVVG
Trigger: CCCCACAACCCTGCGGCACCACAGAGCCGACCACAA...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCCATCCGGCACAGGCGTaGAGGTCTGGGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAHPAQA*RSGQQP
Trigger: AGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATG...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCGTACGCTCGGCAGGCTaGGAAGTCTGGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAVRSAG*EVWSQG
Trigger: TCCCTGACTCCAGACTTCTCAGCCTGCCGAGCGTAC...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCACAGACTGGAGCTTGTaGTCGGCTCTGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEATDWSL*SALWCR
Trigger: GCGGCACCACAGAGCCGACCACAAGCTCCAGTCTGT...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGAGCCCGGCAGTGCTGTaGAGGTACCTGCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLSPAVL*RYLQSW
Trigger: CCAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCT...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTTTGTTGAGCGCCTCATaGTCGATCCCACACAGACTG +
Preference number: 4 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSLLSAS*SIPHRL
Trigger: CAGTCTGTGTGGGATCGATCATGAGGCGCTCAACAA...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTGCCACTGCTGTGGCCTaGCCCCTCGGGCCAAGCACT +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLATAVA*PLGPST
Trigger: AGTGCTTGGCCCGAGGGGTCAGGCCACAGCAGTGGC...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCTTCCCAGCCCGGCAGTaGTGTGGAGGTACCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAFPARQ*CGGTCK
Trigger: TTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAA...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CAA 72 bp ACGGCAGGCCGCTCAGTGCTACGGGTCTGCTATCCCTaGGACACTTCTCCTTTTTGGGGAGGAGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TAGRSVLRVCYP*DTSPFWGGGGR
Trigger: CCTGCCACCTCCTCCCCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCCGTAGCACTGAGCGGCCTGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTACATGCTGCGTTGCGTaGCAATGCTTTTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSTCCVA*QCFSLQ
Trigger: TTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGT...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGAAAAGGTGCCTCATGTaGGCGGCACTTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLKRCLM*AALLCR
Trigger: CCTGCAGAGAAGTGCCGCGCACATGAGGCACCTTTT...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTCCCCTCCAGCGCTGGTaGAAGCACTGGCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLPLQRW*KHWPCS
Trigger: GGAACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGG...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCACGATCCCACACAGACTaGAGCTTGTGGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPTPLCPGHSIRTPGHQPRSHTD*SLWSAL
Trigger: CAGAGCCGACCACAAGCTCCAGTCTGTGTGGGATCG...TGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTGGGCCAAGCACTCACTaGCACCTGGCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLGPSTH*HLAGLC
Trigger: GCAGAGCCCTGCCAGGTGCCAGTGAGTGCTTGGCCC...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTGGGGTTGGGAGGCTCTaGGGACCCTCTGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLGVGRL*GPSVLP
Trigger: GGGGAGAACAGAGGGTCCCCAGAGCCTCCCAACCCC...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGGCCCCCTCCAGCGCTaGTGCAAGCACTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QILLLHRGHLSCANAGTDGPLQR*CKHWPC
Trigger: ACAGGGCCAGTGCTTGCACCAGCGCTGGAGGGGGCC...ATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTCGAAGCACTCCTGCATaGCAGACTCTGTCTTTACTC +
Preference number: 4 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSRSTPA*QTLSLL
Trigger: GAGTAAAGACAGAGTCTGCCATGCAGGAGTGCTTCG...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAGGTCATCTTCAAGCGACTGCCAGTAACTaGTCAAGCTCATGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PGHSIRTPGHQPGPGHLQATASN*SSSCAR
Trigger: CCGCGCACATGAGCTTGATCAGTTACTGGCAGTCGC...TTGAAGATGACCTGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGTTCAACCTCCTCGCCTaGCAGGTAACTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLFNLLA*QVTLEG
Trigger: TCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAA...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGTTACTACTTCAGGCGTaGTGGAACCACGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLLLLQA*WNHGQS
Trigger: GCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTAA...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTTGGTCGGCTCTGTGGTaGCGCAGGGTTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLWSALW*RRVVGH
Trigger: ATGCCCCACAACCCTGCGGCACCACAGAGCCGACCA...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AAGCACTGGCCCTGTTCCCAGCCCGGCAGTGCTGTGGAGGTACCTGCAAAGCTGCTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: KHWPCSQPGSAVEVPAKLLNEAT*CVACQC
Trigger: GCATTGGCACGCAACGCAGCATGTGGCTTCATTGAG...CAGCTTTGCAGGTACCTCCACAGCACTGCCGGGCTGGGAACAGGGCCAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTTGTTCTCCCCAGGTTTaGAGGTTCAGTTCTTACCCC +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSCSPQV*RFSSYP
Trigger: GGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACA...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTGCTTACTGGGCCATCTaGATTACCAAGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSAYWAI*ITKEQR
Trigger: TCGCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGC...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CTGTCCTGCTCCAGGCGGGGCTTGGCCCTCTTCCTTCCCTTTTTCATCTGCGTTGCCCTCAGGCGCGCATaGTCTTCCTTCCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSCSRRGLALFLPFFICVALRRA*SSFLVF
Trigger: GAAAACCAGGAAGGAAGACCATGCGCGCCTGAGGGC...AACGCAGATGAAAAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCAGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTTGCCTCCCTAACTTCTaGGTGTTTAGTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSCLPNF*VFSVRA
Trigger: TGCACGCACACTAAACACCCAGAAGTTAGGGAGGCA...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTCTCACAAGGTTGATCTaGGGACTTCACTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSLTRLI*GLHWIS
Trigger: ACTGATCCAGTGAAGTCCTCAGATCAACCTTGTGAG...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp CCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCAGCAGGTCTGTCAGTaGCTTATAGAGGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: PTPLCPGHSIRTPGHQPGQQVCQ*LIEEAV
Trigger: AACGGCCTCCTCTATAAGGCACTGACAGACCTGCTG...ACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR GCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGTGCTGTGGAGGTACCTaGAAAGCTGGCGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLCCGGT*KAGVLL
Trigger: CAGCAGAACGCCAGCTTTGCAGGTACCTCCACAGCA...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGTGGACACCCCGCAACTaGCTACCAGAAACCCTAGAG +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLWTPRN*LPETLE
Trigger: CTCTAGGGTTTCTGGTAGCCAGTTGCGGGGTGTCCA...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGCATTGTGCTGGATGTTaGGTCCAGTCTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLHCAGC*VQSSGG
Trigger: GCCCCCAGAAGACTGGACCCAACATCCAGCACAATG...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGAGGTCATACAGCTCCTaGCTCACTTCAGGGGTACAC +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLRSYSS*LTSGVH
Trigger: GTGTACCCCTGAAGTGAGTCAGGAGCTGTATGACCT...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTGGGCATCAGGGTCCCTaGAATCATTTTGTACAAAGT +
Preference number: 4 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSGHQGP*NHFVQS
Trigger: ACTTTGTACAAAATGATTTCAGGGACCCTGATGCCC...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTGCGCGGCACTTCTCTaGAGGACAGCCTCCATGTGT +
Preference number: 4 (lower is better)
Translates to: VACQCFSLQMWDGQSLSICAALL*RTASMC
Trigger: ACACATGGAGGCTGTCCTGCAGAGAAGTGCCGCGCA...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR GCA 90 bp CCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCACTTCCCTTTTTCATCTaGGTTGTCAGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PPTPLCPGHSIRTPGHQPLPFFI*VVSSAT
Trigger: GGTGGCTGAGCTGACAACGCAGATGAAAAAGGGAAG...TGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR GCA 90 bp CCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAGGTCATCTTCAACTCAATGAAGCCACATaGTGCGTTGCGTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: PGHSIRTPGHQPGPGHLQLNEAT*CVACQC
Trigger: GCATTGGCACGCAACGCAGCATGTGGCTTCATTGAG...TTGAAGATGACCTGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR GCA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGACTCTGTCTTTACTCTaGTGTGGCCCCCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWTLSLL*CGPLQR
Trigger: GCGCTGGAGGGGGCCACAGCAGAGTAAAGACAGAGT...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGCCTGCGAAGCACTCCTaGATGGCAGACTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLPAKHS*MADSVF
Trigger: AAAGACAGAGTCTGCCATGCAGGAGTGCTTCGCAGG...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCCATGGTCTTCCTTCCTaGTTTTCTTTGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAHGLPS*FSLRCS
Trigger: GGAGCACCTCAAAGAAAACCAGGAAGGAAGACCATG...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGGTCTGGGCAGCAGCCTaGGGCTCTCTGGGCCTAACT +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMVWAAA*GSLGLT
Trigger: AGTTAGGCCCAGAGAGCCCCAGGCTGCTGCCCAGAC...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCACTTCCTGGTTTTCTTTaGGGTGCTCCTCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: PPTPLCPGHSIRTPGHQPLPGFL*GAPHEE
Trigger: TTCCTCATGAGGAGCACCTCAAAGAAAACCAGGAAG...TGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGGTACGCTCGGCAGGCTaGGAAGTCTGGAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMVRSAG*EVWSQG
Trigger: TCCCTGACTCCAGACTTCTCAGCCTGCCGAGCGTAC...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACCTGACAGGTAACTCTTaGGGGAGCTGTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYLTGNS*GSCPAP
Trigger: TGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAG...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGCAAGGTAAGGGACAGTaGCACAGGAGAGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLQGKGQ*HRRAYQ
Trigger: CTGATAAGCTCTCCTGTGTCACTGTCCCTTACCTTG...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGATGCACAGCCAAGGCTaGGAGGCATTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWMHSQG*EALCWM
Trigger: CATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCAT...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGTCAGCTCAGCCACCTaGCCCTGCCACACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAVSSAT*PCHTRP
Trigger: GGGCCTGGTGTGGCAGGGGCAGGTGGCTGAGCTGAC...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CCA 90 bp CAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATCGATCCCACACAGACTaGAGCTTGTGGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QILLLHRGHLSCANAGTDRSHTD*SLWSAL
Trigger: CAGAGCCGACCACAAGCTCCAGTCTGTGTGGGATCG...ATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAAGCAGGGCTCTGCAGGTaGAGGTGGCCATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WFNSINCLNEATCCVACQAGLCR*RWPCQH
Trigger: ATGCTGGCATGGCCACCTCCACCTGCAGAGCCCTGC...TTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACCCCCTTACCCTGGCCTaGGTGGCACAGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNPLTLA*VAQACP
Trigger: AGGACAGGCCTGTGCCACCCAGGCCAGGGTAAGGGG...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGGAGACAGCAGAGCAGTaGAGTCCCCGCTCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAAETAEQ*SPRSQP
Trigger: AGGCTGCGAGCGGGGACTTCACTGCTCTGCTGTCTC...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGCTTCCTGGTTTTCTTTaGGGTGCTCCTCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLLPGFL*GAPHEE
Trigger: TTCCTCATGAGGAGCACCTCAAAGAAAACCAGGAAG...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCAGGTCATACAGCTCCTaGCTCACTTCAGGGGTACAC +
Preference number: 4 (lower is better)
Translates to: VACQCFSLQMWDGQSLSIRSYSS*LTSGVH
Trigger: GTGTACCCCTGAAGTGAGTCAGGAGCTGTATGACCT...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACCATCAACTGCCTCAATaGAGCCACATGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYHQLPQ*SHMLRC
Trigger: GCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATG...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp AATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATTGCCCAACCTTGGCCTaGACCAGAAGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NEATCCVACQCFSLQMWDCPTLA*TRRWSL
Trigger: CAGGCTCCACCTTCTGGTTCAGGCCAAGGTTGGGCA...ATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GACCCTCTGTTCTCCCCAGGTTTGCAGGTTCAGTTCTTACCCCGGCCACTGCTGTGTGCTAGAAGGACCTaGGACAAATTGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPLFSPGLQVQFLPRPLLCARRT*DKLMAA
Trigger: TGCTGCCATCAATTTGTCTCAGGTCCTTCTAGCACA...CAGCAGTGGCCGGGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAGAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTTCCTTATTTGGAAAATaGGAACAACTTTGCGAGACT +
Preference number: 4 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSSLFGK*EQLCET
Trigger: AGTCTCGCAAAGTTGTTCTCATTTTCCAAATAAGGA...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGTCAGCTCAGCCACCTaGCCCTGCCACACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSRRADGLTPSTASMKPHVSSAT*PCHTRP
Trigger: GGGCCTGGTGTGGCAGGGGCAGGTGGCTGAGCTGAC...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTTTGAGGGAGCTGTCCTaGTCCAGGCGGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHALRELS*SRRGLA
Trigger: GGCCAAGCCCCGCCTGGAGCAGGACAGCTCCCTCAA...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGCATCTACTCCCTGCTTaGTCCGCAGCTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMHLLPA*SAAVAI
Trigger: GATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATG...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACAGCCACATGCTGCGTTaGGTGCCAATGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYSHMLR*VPMLFP
Trigger: AGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCT...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR GCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGAGCAGTGCCTGACCTaGGAAGCACTCCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALREQCLT*EALLHG
Trigger: GCCATGCAGGAGTGCTTCGCAGGTCAGGCACTGCTC...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGACCTTCCATTCCCTCTaGCCACTCCTTCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWTFHSL*PLLLVP
Trigger: AGGGACAAGAAGGAGTGGGCAGAGGGAATGGAAGGT...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGTGGTCGGCTCTGTaGTGCCGCAGGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAALWSAL*CRRVVG
Trigger: CCCCACAACCCTGCGGCACCACAGAGCCGACCACAA...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTACAGACTGGAGCTTGTaGTCGGCTCTGTGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRTDWSL*SALWCR
Trigger: GCGGCACCACAGAGCCGACCACAAGCTCCAGTCTGT...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCCCCGGCCACTGCTGTaGCCTGACCCCTCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSPRPLL*PDPSGQ
Trigger: TTGGCCCGAGGGGTCAGGCCACAGCAGTGGCCGGGG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTGTCTTTACTCTGCTGTaGCCCCCTCCAGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAALRANAFVFTLL*PPPALV
Trigger: CACCAGCGCTGGAGGGGGCCACAGCAGAGTAAAGAC...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTCCTTCTTGTCCCTTCTaGTCTCTGTCCTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLPSCPF*SLSSWL
Trigger: GAGCCATGAGGACAGAGACCAGAAGGGACAAGAAGG...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGAGACAGCAGAGCAGTaGAGTCCCCGCTCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAETAEQ*SPRSQP
Trigger: AGGCTGCGAGCGGGGACTTCACTGCTCTGCTGTCTC...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTGCGACTGCCAGTAACTaGTCAAGCTCAGCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSATASN*SSSARA
Trigger: AGCTCTAGCTGAGCTTGATCAGTTACTGGCAGTCGC...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTCAAAAGGCCTTGGCCTaGCCTCAGCCCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRQKALA*PQPMMV
Trigger: GACCATCATGGGCTGAGGTCAGGCCAAGGCCTTTTG...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTGTGCCCCAGTCTCCATaGTGTGCTTTTTCACATTGC +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLVPQSP*CAFSHC
Trigger: GCAATGTGAAAAAGCACATCATGGAGACTGGGGCAC...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTTGGTCGGCTCTGTGGTaGCGCAGGGTTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAWSALW*RRVVGH
Trigger: ATGCCCCACAACCCTGCGGCACCACAGAGCCGACCA...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATTTGAGGGAGCTGTCCTaGTCCAGGCGGGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSRRADGLTPSTASMKPHLRELS*SRRGLA
Trigger: GGCCAAGCCCCGCCTGGAGCAGGACAGCTCCCTCAA...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTCATCTACTCCCTGCTTaGTCCGCAGCTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRHLLPA*SAAVAI
Trigger: GATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATG...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTGCGTTGCGTGCCAATaGTTTTCCCTGCAAATGTGG +
Preference number: 4 (lower is better)
Translates to: VACQCFSLQMWDGQSLSICVACQ*FSLQMW
Trigger: CCACATTTGCAGGGAAAAGCATTGGCACGCAACGCA...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CCA 90 bp TACTACTTCAGGCGTGATGGAACCACGGTCAGAGCCGGGGTCGCCCAGGAAGCCGAATTCCAACTTGGATaGTTTGTAAGTCGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: YYFRRDGTTVRAGVAQEAEFQLG*FVSRVR
Trigger: TCTCACTCGACTTACAAACCATCCAAGTTGGAATTC...GGCTTCCTGGGCGACCCCGGCTCTGACCGTGGTTCCATCACGCCTGAAGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTCTCTGCAGGTGGAGGTaGCCATGCCAGCATCTCAGA +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRLCRWR*PCQHLR
Trigger: TCTGAGATGCTGGCATGGCCACCTCCACCTGCAGAG...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCCACCAAGGTGGCTCTaGCCCGTCTCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSPPRWL*PVSRPR
Trigger: CCTGGGCCTGGAGACGGGCCAGAGCCACCTTGGTGG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTGCTGCACAAAGCTGTaGAGAGGCCAGTCAGGGACG +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAACCTKL*RGQSGT
Trigger: CGTCCCTGACTGGCCTCTTCACAGCTTTGTGCAGCA...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTCCATGTGTGCGTTCTaGTCAGCAGAGAGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMSMCAF*SAESVV
Trigger: GACAACGCTCTCTGCTGAGCAGAACGCACACATGGA...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACTCTCCATCTACTCCCTaGTTGCTCCGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNSPSTP*LLRSCG
Trigger: GCCACAGCTGCGGAGCAAGCAGGGAGTAGATGGAGA...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp CAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCAATGCTTTTCCCTaGAAATGTGGGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QILLLHRGHLSCANAGTDANAFP*KCGMGR
Trigger: TCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGC...ATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTTGCGTTGCGTGCCAATaGTTTTCCCTGCAAATGTGG +
Preference number: 4 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSCVACQ*FSLQMW
Trigger: CCACATTTGCAGGGAAAAGCATTGGCACGCAACGCA...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTTCTGTCCCTTCTCCCTaGCCTGTTGTCCCCTCATTC +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRSVPSP*PVVPSF
Trigger: GAATGAGGGGACAACAGGGCAGGGAGAAGGGACAGA...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCCATGGTCTTCCTTCCTaGTTTTCTTTGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VACQCFSLQMWDGQSLSIHGLPS*FSLRCS
Trigger: GGAGCACCTCAAAGAAAACCAGGAAGGAAGACCATG...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTTTTCCCTGCAAATGTaGGATGGGCAGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMFSLQM*DGQSLS
Trigger: GGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAA...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp AATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATTTGTTGAGCGCCTCATaGTCGATCCCACACAGACTG +
Preference number: 4 (lower is better)
Translates to: NEATCCVACQCFSLQMWDLLSAS*SIPHRL
Trigger: CAGTCTGTGTGGGATCGATCATGAGGCGCTCAACAA...ATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGCTGACAGGTAACTCTTaGGGGAGCTGTCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAALTGNS*GSCPAP
Trigger: TGGAGCAGGACAGCTCCCTCAAGAGTTACCTGTCAG...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTTTCAACCTCCTCGCCTaGCAGGTAACTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAALRANAFFNLLA*QVTLEG
Trigger: TCCCTCAAGAGTTACCTGTCAGGCGAGGAGGTTGAA...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAACAAAGGACACACCATTaGGGGCGTTCTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TASMKPHAALRANAFPCKQRTHH*GRSLLL
Trigger: AAGAAGGAGAGAACGCCCTCAATGGTGTGTCCTTTG...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGCTTCCCTTTTTCATCTaGGTTGTCAGCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMLPFFI*VVSSAT
Trigger: GGTGGCTGAGCTGACAACGCAGATGAAAAAGGGAAG...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGCGAGACTGCTATGGATaGCAACACCACATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAARDCYG*QHHIRH
Trigger: GTGCCGGATGTGGTGTTGGCATCCATAGCAGTCTCG...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp AATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATTTCCTCAGGGTCTGCTaGGACATCAAAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: NEATCCVACQCFSLQMWDFLRVC*DIKRCL
Trigger: GAGGCACCTTTTGATGTCCCAGCAGACCCTGAGGAA...ATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCTTTCTGCCCAACCTTaGCCTGAACCAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAALRANAFLSAQP*PEPEGG
Trigger: TCCACCTTCTGGTTCAGGCCAAGGTTGGGCAGAAAG...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATTTGCGAGACTGCTATaGATGCCAACACCACATCCG +
Preference number: 4 (lower is better)
Translates to: TASMKPHAALRANAFPCKFARLL*MPTPHP
Trigger: CGGATGTGGTGTTGGCATCCATAGCAGTCTCGCAAA...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CAA 72 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTaGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAA*RANAFPCKCGM
Trigger: CATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp CTGTCCTGCTCCAGGCGGGGCTTGGCCCTCTTCCTTCCCTTTTTCATCTGCGTTAAAGCTAGAAAATGTTaGAGTAGCAGAAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSCSRRGLALFLPFFICVKARKC*SSRRAD
Trigger: ATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTT...AACGCAGATGAAAAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCAGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp TCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATGCCTTACAAAGAATTCAGTATaGCTCAGAGTCGCACACTCT +
Preference number: 4 (lower is better)
Translates to: STPAPWAPVMCKCWDRCLTKNSV*LRVAHS
Trigger: AGAGTGTGCGACTCTGAGTCATACTGAATTCTTTGT...AAGGCATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAAGCCAATGCTTTTCCCTaGAAATGTGGGATGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WFNSINCLNEATCCVACQANAFP*KCGMGR
Trigger: TCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGC...TTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTAGGTGGAGGTGGCCATaGCAGCATCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVRWRWP*QHLRDT
Trigger: AGTGTCTCTGAGATGCTGGCATGGCCACCTCCACCT...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTCCTGGTTGGATCTCCTaGAGCACTTCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAPGWIS*STSPLP
Trigger: AGGGAGAGGTGAAGTGCTGCAGGAGATCCAACCAGG...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTCGTCATCTGGAGAGCTaGGGAAAATCCCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVRHLES*GKSPGV
Trigger: CACTCCTGGGGATTTTCCGCAGCTCTCCAGATGACG...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGGGCACAAAGGATAAATaGTTGAGGGGATGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAAGTKDK*LRGWVP
Trigger: GGGCACCCATCCCCTCAAGCATTTATCCTTTGTGCC...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTTTCCCTGCAAATGTaGGATGGGCAGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAAFSLQM*DGQSLS
Trigger: GGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAA...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTTTACCCTGGCCTGGGTaGCACAGGCCTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSLPWPG*HRPVLP
Trigger: AGGAAGGACAGGCCTGTGCCACCCAGGCCAGGGTAA...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTTTGAGGTGCTCCTCATaGGGAATTCCAACTTGGATG +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAALRANAFLRCSS*GIPTWM
Trigger: CATCCAAGTTGGAATTCCTCATGAGGAGCACCTCAA...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTTCCATGTGTGCGTTCTaGTCAGCAGAGAGCGTTGTC +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHASMCAF*SAESVV
Trigger: GACAACGCTCTCTGCTGAGCAGAACGCACACATGGA...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGACATGCTGCGTTGCGTaGCAATGCTTTTCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAATCCVA*QCFSLQ
Trigger: TTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGT...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGAGGGAGTCAGCATCTTaGAGCAGCATCTCCTACTGT +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAARESAS*SSISYC
Trigger: ACAGTAGGAGATGCTGCTGCAAGATGCTGACTCCCT...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACCCTGGGCACATCAGATaGATGCAAAGGTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNPGHIR*MQRCVC
Trigger: GCATACACACCTTTGCATGCATCTGATGTGCCCAGG...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGAACCAAAAGGTCTCTaGTCCCCTTACCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSRRADGLTPSTASMKPHEPKGL*SPYPGL
Trigger: CAGGCCAGGGTAAGGGGAGCAGAGACCTTTTGGTTC...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTCCAGTCTCCATGATGTaGTTTTTCACATTGCATGTC +
Preference number: 4 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSPVSMM*FFTLHV
Trigger: GACATGCAATGTGAAAAAGCACATCATGGAGACTGG...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACGAATTCCAACTTGGATaGTTTGTAAGTCGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYEFQLG*FVSRVR
Trigger: TCTCACTCGACTTACAAACCATCCAAGTTGGAATTC...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTCGAGGCAAATTTCTTaGGCCAGTTCTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAASRQIS*ASSCRR
Trigger: TCTCCTGCAAGAACTGGCTCAAGAAATTTGCCTCGA...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTTTAACTCCATCAACTaGCTCAATGAAGCCACATGC +
Preference number: 4 (lower is better)
Translates to: CLNEATCCVACQCFSLQMFNSIN*LNEATC
Trigger: GCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAA...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp AATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGCACATCAGATGCATaGAAAGGTGTGTATGCAAAG +
Preference number: 4 (lower is better)
Translates to: NEATCCVACQCFSLQMWDGTSDA*KGVYAK
Trigger: CTTTGCATACACACCTTTGCATGCATCTGATGTGCC...ATCCCACATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTAGAAAATACACTAGCTaGCCACGGGCACCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHARKYTS*PRAPRE
Trigger: TTCCCTTGGTGCCCGTGGCCAGCTAGTGTATTTTCT...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTTTGGGTCCAGTCTTCTaGGGGCCTACAAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSLGPVF*GPTRGD
Trigger: ATCACCCCTTGTAGGCCCCCAGAAGACTGGACCCAA...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCATCAACTGCCTCAATaGAGCCACATGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSHQLPQ*SHMLRC
Trigger: GCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGAGCATTTATGATCTTTaGGGCCACAGTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RRADGLTPSTASMKPHAASIYDL*GHSRAA
Trigger: TGCTGCTCTACTGTGGCCTCAAAGATCATAAATGCT...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTAGCCACATGCTGCGTTaGGTGCCAATGCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSSHMLR*VPMLFP
Trigger: AGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCT...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTACAACTTTGCGAGACTaGTATGGATGCCAACACCAC +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHATTLRD*YGCQHH
Trigger: GTGGTGTTGGCATCCATAGCAGTCTCGCAAAGTTGT...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATTCTGGGTGTTTAGTGTaGGTGCACGTCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSRRADGLTPSTASMKPHSGCLV*VHVIWR
Trigger: TCTCCAGATGACGTGCACGCACACTAAACACCCAGA...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACTGTAGAGTTGCTTACTaGGCCATCTGCATTACCAAG +
Preference number: 4 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNCRVAY*AICITK
Trigger: CTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACA...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGGGCATCAGGGTCCCTaGAATCATTTTGTACAAAGT +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAGHQGP*NHFVQS
Trigger: ACTTTGTACAAAATGATTTCAGGGACCCTGATGCCC...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGGACCTGAGACAAATTaGTGGCAGCAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAGPETN*WQQSVL
Trigger: CAAAACAGATTGCTGCCATCAATTTGTCTCAGGTCC...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGGAGAGCTTATCAGACTaGAAACCTGTGAAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPEESLSD*KPVKSF
Trigger: AAACGACTTCACAGGTTTTCAGTCTGATAAGCTCTC...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTTCTCCATCTACTCCCTaGTTGCTCCGCAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVSPSTP*LLRSCG
Trigger: GCCACAGCTGCGGAGCAAGCAGGGAGTAGATGGAGA...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTTGCGTGCACGTCATCTaGAGAGCTGCGGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: STSKCSNVCRVAYWAICICVHVI*RAAENP
Trigger: GGGATTTTCCGCAGCTCTCCAGATGACGTGCACGCA...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTAAAGCTAGAAAATGTTaGAGTAGCAGAAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ADGLTPSTASMKPHAALRKARKC*SSRRAD
Trigger: ATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTT...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR TCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTTCCCTTGTCTTaGACAAACACTATCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSAFPLS*TNTIGG
Trigger: GCCACCGATAGTGTTTGTTCAAGACAAGGGAAATGC...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp GGCTCACGGTGTAACAGAGGCATCAGCCTTTATGTGTGGTGTACACTTTGTAACAGTACCTCAAGTTTCTaGTGTAAAACCAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSRCNRGISLYVWCTLCNSTSSF*CKTRFS
Trigger: GGAAAACCTGGTTTTACATCAGAAACTTGAGGTACT...GTTACAAAGTGTACACCACACATAAAGGCTGATGCCTCTGTTACACCGTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCAGCAGGTCTGTCAGTaGCTTATAGAGGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: STSKCSNVCRVAYWAICIQQVCQ*LIEEAV
Trigger: AACGGCCTCCTCTATAAGGCACTGACAGACCTGCTG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp AGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTTTTAACTCCATCAACTaGCTCAATGAAGCCACATGC +
Preference number: 4 (lower is better)
Translates to: SRRADGLTPSTASMKPHAFNSIN*LNEATC
Trigger: GCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAA...AGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR GCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCCTTACCCCACACAGTaGACATGCAGCTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: STSKCSNVCRVAYWAICIPYPTQ*TCSFLG
Trigger: ACCCAGAAAGCTGCATGTGCACTGTGTGGGGTAAGG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR GCA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTTTTATTTCAGTATCTTaGCAGCACCCACAGCATTTA +
Preference number: 4 (lower is better)
Translates to: TPSTASMKPHAALRANAFFISVS*QHPQHL
Trigger: TAAATGCTGTGGGTGCTGGCAAGATACTGAAATAAA...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCCTGCAAATGTGGGATaGGCAGAGCCTCTCCATCTA +
Preference number: 4 (lower is better)
Translates to: STSKCSNVCRVAYWAICIPANVG*AEPLHL
Trigger: TAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTTGTACACCCCTTCACTaGACACCCCGCAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVCTPLH*TPRNWL
Trigger: TAGCCAGTTGCGGGGTGTCCAGTGAAGGGGTGTACA...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306735.10
3UTR CAA 72 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTaGCTTACTGGGCCATCTGCATTACCAAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVE*LTGPSALPRNS
Trigger: GCTGTTCCTTGGTAATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTCCTGCAAATGTGGGATaGGCAGAGCCTCTCCATCTA +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVPANVG*AEPLHL
Trigger: TAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGG...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
3UTR CAA 72 bp ATAAGAGGCAAACTGGTTGTTGTAAGCCAGGGAGATTaGCCATTTGTCACTGCAGTATCACCTCATTATCCT +
Preference number: 4 (lower is better)
Translates to: IRGKLVVVSQGD*PFVTAVSPHYP
Trigger: AGGATAATGAGGTGATACTGCAGTGACAAATGGCAAATCTCCCTGGCTTACAACAACCAGTTTGCCTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTTCGAGGCAAATTTCTTaGGCCAGTTCTTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: STSKCSNVCRVAYWAICISRQIS*ASSCRR
Trigger: TCTCCTGCAAGAACTGGCTCAAGAAATTTGCCTCGA...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTCTCCTTCAAGGCAGCTaGCAAATTTTCAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSLLQGS*QIFKVP
Trigger: AGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAG...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTAGGTACCTGCAAAGCTaGCGTTCTGCTGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVRYLQS*RSAVFS
Trigger: TGAGAAAACAGCAGAACGCCAGCTTTGCAGGTACCT...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTCAGAGCCTTGTAACCTaGAGTTATCTTGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVQSLVT*SYLARE
Trigger: TTCCCTAGCAAGATAACTTCAGGTTACAAGGCTCTG...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR TCA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTCAGACTGAAAACCTGTaGAGTCGTTTCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVQTENL*SRFTFH
Trigger: ATGAAATGTGAAACGACTTCACAGGTTTTCAGTCTG...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp CAACACCACATCCGGCACAGGCGTGGAGGTCTGGGCAGCAGCCTGGGGCTCTCTCACACAGACTGGAGCTaGTGGTCGGCTCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: QHHIRHRRGGLGSSLGLSHTDWS*WSALWC
Trigger: GCACCACAGAGCCGACCACAAGCTCCAGTCTGTGTG...AGAGAGCCCCAGGCTGCTGCCCAGACCTCCACGCCTGTGCCGGATGTGGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp TGGCCTCATCACTCGCCCACAGCCGCTGTCTGCAGCACGTGGCCTGGATCCAGTCTTCCCTGTGCCGTCTaGATTCTCACAGCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: WPHHSPTAAVCSTWPGSSLPCAV*ILTALL
Trigger: CAGCAGGGCTGTGAGAATCAAGACGGCACAGGGAAG...ACTGGATCCAGGCCACGTGCTGCAGACAGCGGCTGTGGGCGAGTGATGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp CCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTGCTCAGCAGAGAGCGTaGTCTTCCAGTACGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PTPLCPGHSIRTPGHQPGAQQRA*SSSTLG
Trigger: GCCGAGCGTACTGGAAGACAACGCTCTCTGCTGAGC...ACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS GCA 90 bp ATGTGCGCGGCACTTCTCTGCAGGACAGCCTCCATGTGTGCGTTCTaGTCAGCAGAGAGCGTTGTCTTCCAGTACGCTCGGCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: MCAALLCRTASMCAF*SAESVVFQYARQAE
Trigger: CTCAGCCTGCCGAGCGTACTGGAAGACAACGCTCTCTGCTGAGCAGAACGCACACATGGAGGCTGTCCTGCAGAGAAGTGCCGCGCACAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp CCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAGGTCATCTTCAACACACAGACTGGAGCTaGTGGTCGGCTCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PGHSIRTPGHQPGPGHLQHTDWS*WSALWC
Trigger: GCACCACAGAGCCGACCACAAGCTCCAGTCTGTGTG...TTGAAGATGACCTGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS GCA 90 bp ATACAGCTCCTGACTCACTTCAGGGGTACACAGCAGGTCTGTCAGTaGCTTATAGAGGAGGCCGTTCAGGGCCCTCAGGCGCGCATGGTC +
Preference number: 5 (lower is better)
Translates to: IQLLTHFRGTQQVCQ*LIEEAVQGPQARMV
Trigger: GACCATGCGCGCCTGAGGGCCCTGAACGGCCTCCTCTATAAGGCACTGACAGACCTGCTGTGTACCCCTGAAGTGAGTCAGGAGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262197.7
ENST00000306735.10
ENST00000586847.1
CDS-3UTR CAA 90 bp CCTCCAACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCACCTTTTTCATCTGCGTaGTCAGCTCAGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: PPTPLCPGHSIRTPGHQPPFSSA*SAQPPA
Trigger: GGCAGGTGGCTGAGCTGACAACGCAGATGAAAAAGG...TGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACTGCTCCAGGCGGGGCTaGGCCCTCTTCCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYCSRRG*ALFLPF
Trigger: AAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCA...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp ACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCAAAGCCACATGCTGCGTaGCGTGCCAATGCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: TPLCPGHSIRTPGHQPGPKPHAA*RANAFP
Trigger: GGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTT...TGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCAGCTCCAGGGGGTaGGGAGGCTCTGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: TPSTASMKPHAALRANAFPSSRG*GGSGDP
Trigger: AGGGTCCCCAGAGCCTCCCAACCCCCTGGAGCTGGG...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGCTCAGCAGAGAGCGTaGTCTTCCAGTACGCTCGGC +
Preference number: 5 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWAQQRA*SSSTLG
Trigger: GCCGAGCGTACTGGAAGACAACGCTCTCTGCTGAGC...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS TCA 90 bp GAGGCAAATTTCTTGAGCCAGTTCTTGCAGGAGACAGCAGAGCAGTaGAGTCCCCGCTCGCAGCCTGGAAATAGCGCAGCATCGCGGCTA +
Preference number: 5 (lower is better)
Translates to: EANFLSQFLQETAEQ*SPRSQPGNSAASRL
Trigger: TAGCCGCGATGCTGCGCTATTTCCAGGCTGCGAGCGGGGACTTCACTGCTCTGCTGTCTCCTGCAAGAACTGGCTCAAGAAATTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262197.7
ENST00000306735.10
ENST00000586847.1
ENST00000591612.1
CDS CCA 90 bp GGGACACTACCCCAGCCTAAGGAAACAAGACAATTCAATGTAACGTaGACCTTGGGTGGGCACCTGGGACAGGAAGGGACAGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: GTLPQPKETRQFNVT*TLGGHLGQEGTAGR
Trigger: TCTGCCTGCTGTCCCTTCCTGTCCCAGGTGCCCACCCAAGGTCCACGTTACATTGAATTGTCTTGTTTCCTTAGGCTGGGGTAGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS-3UTR CAA 90 bp GCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTACGGAGTCAGGGAAACCTaGGAGAGCTCCACGTTAAGG +
Preference number: 5 (lower is better)
Translates to: ACQCFSLQMWDGQSLSIYGVRET*ESSTLR
Trigger: CCTTAACGTGGAGCTCTCCAAGGTTTCCCTGACTCC...GTAGATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGTGCTCCAGGCGGGGCTaGGCCCTCTTCCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPECSRRG*ALFLPF
Trigger: AAAGGGAAGGAAGAGGGCCAAGCCCCGCCTGGAGCA...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTCCATCTACTCCCTGCTaGCTCCGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: ADGLTPSTASMKPHAALRPSTPC*LRSCGH
Trigger: ATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATGG...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCATCTACTCCCTGCTaGCTCCGCAGCTGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: TPSTASMKPHAALRANAFPSTPC*LRSCGH
Trigger: ATGGCCACAGCTGCGGAGCAAGCAGGGAGTAGATGG...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp CAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGACAGATTTCTTGAGCCAGTTCTaGCAGGAGACAGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: QILLLHRGHLSCANAGTDFLSQF*QETAEQ
Trigger: CTGCTCTGCTGTCTCCTGCAAGAACTGGCTCAAGAA...ATCTGTCCCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCTTCGAGGCAAATTTCTaGAGCCAGTTCTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: VACQCFSLQMWDGQSLSIFEANF*SQFLQE
Trigger: CTCCTGCAAGAACTGGCTCAAGAAATTTGCCTCGAA...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp TGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAACCTTTTTCATCTGCGTaGTCAGCTCAGCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: WFNSINCLNEATCCVACQPFSSA*SAQPPA
Trigger: GGCAGGTGGCTGAGCTGACAACGCAGATGAAAAAGG...TTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTAAGCCACATGCTGCGTaGCGTGCCAATGCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: TPSTASMKPHAALRANAFKPHAA*RANAFP
Trigger: GGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTT...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAACGGGTCTGCTATCCCTaGGACACTTCTCCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: TASMKPHAALRANAFPCKRVCYP*DTSPFW
Trigger: CCAAAAAGGAGAAGTGTCCAAGGGATAGCAGACCCG...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAAAAGGGAGTCAGCATCTaGCAGCAGCATCTCCTACTG +
Preference number: 5 (lower is better)
Translates to: TASMKPHAALRANAFPCKKGVSI*QQHLLL
Trigger: CAGTAGGAGATGCTGCTGCAAGATGCTGACTCCCTT...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGGTAAGCCAGGGAGATTaGCCATTTGTCACTGCAGTA +
Preference number: 5 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWVSQGD*PFVTAV
Trigger: TACTGCAGTGACAAATGGCAAATCTCCCTGGCTTAC...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAAGCAAAGGACACACCATaGAGGGCGTTCTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TASMKPHAALRANAFPCKAKDTP*RAFSPS
Trigger: AGAAGGAGAGAACGCCCTCAATGGTGTGTCCTTTGC...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp CAAAGCTGGCGTTCTGCTGTTTTCTCATGGAGTCATCATGGTCAAGTACCAGAGGCATTGTGCTGGATGTaGGGTCCAGTCTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QSWRSAVFSWSHHGQVPEALCWM*GPVFWG
Trigger: CCCCCAGAAGACTGGACCCAACATCCAGCACAATGC...CTCTGGTACTTGACCATGATGACTCCATGAGAAAACAGCAGAACGCCAGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp TGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATGACAAAGGATAAATGCTaGAGGGGATGGGTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CLNEATCCVACQCFSLQMTKDKC*RGWVPQ
Trigger: CTGGGGCACCCATCCCCTCAAGCATTTATCCTTTGT...CATTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTTTCTTGAGCCAGTTCTaGCAGGAGACAGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: ADGLTPSTASMKPHAALRFLSQF*QETAEQ
Trigger: CTGCTCTGCTGTCTCCTGCAAGAACTGGCTCAAGAA...ACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTCCTCTGTGTCCGGGGCATAGCATTCGTACTCCGGGGCACCAACCAGGTCCATTATCTTTCCTCCTTTaGTACTCCATAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TPLCPGHSIRTPGHQPGPLSFLL*YSIICL
Trigger: CAAGCAGATTATGGAGTACAAAAGGAGGAAAGATAA...TGGACCTGGTTGGTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGAAAATGAGAACAACTTaGCGAGACTGCTATGGATGC +
Preference number: 5 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWKMRTT*RDCYGC
Trigger: GCATCCATAGCAGTCTCGCAAAGTTGTTCTCATTTT...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS TCA 90 bp ACTTTTCTCAACGCAACTTGTGCGATCTGTACAAATAACCTGATCTaGACTCATCGCCGTAGCCTTGGGCTCCAGGGTCTGTGCACTAAC +
Preference number: 5 (lower is better)
Translates to: TFLNATCAICTNNLI*THRRSLGLQGLCTN
Trigger: GTTAGTGCACAGACCCTGGAGCCCAAGGCTACGGCGATGAGTTCAGATCAGGTTATTTGTACAGATCGCACAAGTTGCGTTGAGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593019.1
CDS-3UTR CAA 90 bp TTCAGATGCACAGCCAAGGCTGAGAGGCATTGTGCTGGATGTTGGGTCCAGTCTTCATTTTGTACAAAGTaGTCTCTTTCATCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: FRCTAKAERHCAGCWVQSSFCTK*SLSSRG
Trigger: ACCCCGGGATGAAAGAGACAACTTTGTACAAAATGA...AGACTGGACCCAACATCCAGCACAATGCCTCTCAGCCTTGGCTGTGCATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp GTTGCGTGCCAATGCTTTTCCCTGCAAATGTGGGATGGGCAGAGCCTCTCCATCGACTTGTGTAGCAAATaGTGTTTAGATACACGGAAA +
Preference number: 5 (lower is better)
Translates to: VACQCFSLQMWDGQSLSIDLCSK*CLDTRK
Trigger: TTTCCGTGTATCTAAACACAATTTGCTACACAAGTC...GATGGAGAGGCTCTGCCCATCCCACATTTGCAGGGAAAAGCATTGGCACGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262197.7
CDS-3UTR CAA 90 bp GCTTCCACAGATTCTACTCCTGCACCGTGGGCACCTGTCATGTGCAAATGCTGGCTCAAAAGAAAAATCTaGCTTCTGCCATTTGATGAC +
Preference number: 5 (lower is better)
Translates to: ASTDSTPAPWAPVMCKCWLKRKI*LLPFDD
Trigger: GTCATCAAATGGCAGAAGCAAGATTTTTCTTTTGAG...CCAGCATTTGCACATGACAGGTGCCCACGGTGCAGGAGTAGAATCTGTGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCTAATGTTTGTAGAGTaGCTTACTGGGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: TPSTASMKPHAALRANAFLMFVE*LTGPSA
Trigger: TGCAGATGGCCCAGTAAGCAACTCTACAAACATTAG...AAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS TCA 90 bp GGGCACCTGGGACAGGAAGGGACAGCAGGCAGAACCAAGGAAAAGTaGATAAAGTATGAGCTTCAGTTAGCAACACTCTTATCAATATCG +
Preference number: 5 (lower is better)
Translates to: GHLGQEGTAGRTKEK*IKYELQLATLLSIS
Trigger: CGATATTGATAAGAGTGTTGCTAACTGAAGCTCATACTTTATTCACTTTTCCTTGGTTCTGCCTGCTGTCCCTTCCTGTCCCAGGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS-3UTR CAA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTTTCGAGGCAAATTTCTaGAGCCAGTTCTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVFEANF*SQFLQE
Trigger: CTCCTGCAAGAACTGGCTCAAGAAATTTGCCTCGAA...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp ACTGCCTCAATGAAGCCACATGCTGCGTTGCGTGCCAATGCTTTTCCCTGCAAATCTTGCTTCTGCCATTaGATGACTTATACACAGCTT +
Preference number: 5 (lower is better)
Translates to: TASMKPHAALRANAFPCKSCFCH*MTYTQL
Trigger: AAGCTGTGTATAAGTCATCAAATGGCAGAAGCAAGA...TTTGCAGGGAAAAGCATTGGCACGCAACGCAGCATGTGGCTTCATTGAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATAGGGAGATTTGCCATTaGTCACTGCAGTATCACCTC +
Preference number: 5 (lower is better)
Translates to: SSRRADGLTPSTASMKPHREICH*SLQYHL
Trigger: GAGGTGATACTGCAGTGACAAATGGCAAATCTCCCT...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGGGATGGGGAGGTCTCTaGTACATAAATGAATTCACA +
Preference number: 5 (lower is better)
Translates to: RRADGLTPSTASMKPHAAGWGGL*YINEFT
Trigger: TGTGAATTCATTTATGTACAAGAGACCTCCCCATCC...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp TCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGCATTCTGTTCTCCCCAGGTTaGCAGGTTCAGTTCTTACCC +
Preference number: 5 (lower is better)
Translates to: STSKCSNVCRVAYWAICILFSPG*QVQFLP
Trigger: GGGTAAGAACTGAACCTGCAAACCTGGGGAGAACAG...AATGCAGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTCCATCATGTGGGGTTTaGTCTATCCTTACAAATTGC +
Preference number: 5 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVPSCGV*SILTNC
Trigger: GCAATTTGTAAGGATAGACAAAACCCCACATGATGG...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp AGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGCTGCGGTCCCTGAAATCATTTaGTACAAAGTTGTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RRADGLTPSTASMKPHAAVPEII*YKVVSF
Trigger: GAAAGAGACAACTTTGTACAAAATGATTTCAGGGAC...CGCAGCATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp CTCAAGCCCTCTCTCCTTCAAGGCAGCTGGCAAATTTTCAAAGTACCTCAAGTTATTTATTTCAGTATCTaGCCAGCACCCACAGCATTT +
Preference number: 5 (lower is better)
Translates to: LKPSLLQGSWQIFKVPQVIYFSI*PAPTAF
Trigger: AAATGCTGTGGGTGCTGGCAAGATACTGAAATAAAT...AACTTGAGGTACTTTGAAAATTTGCCAGCTGCCTTGAAGGAGAGAGGGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATTTATCTTTCCTCCTTTaGTACTCCATAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SSRRADGLTPSTASMKPHLSFLL*YSIICL
Trigger: CAAGCAGATTATGGAGTACAAAAGGAGGAAAGATAA...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp AGTAGCAGAAGAGCAGATGGTTTAACTCCATCAACTGCCTCAATGAAGCCACATGACTTGTGTAGCAAATaGTGTTTAGATACACGGAAA +
Preference number: 5 (lower is better)
Translates to: SSRRADGLTPSTASMKPHDLCSK*CLDTRK
Trigger: TTTCCGTGTATCTAAACACAATTTGCTACACAAGTC...ATGTGGCTTCATTGAGGCAGTTGATGGAGTTAAACCATCTGCTCTTCTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS-3UTR CAA 90 bp CCCTGTCTACCTCAAAATGTTCTAATGTTTGTAGAGTTGCTTACTGGGCCATCTGTCCCTGAAATCATTTaGTACAAAGTTGTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PCLPQNVLMFVELLTGPSVPEII*YKVVSF
Trigger: GAAAGAGACAACTTTGTACAAAATGATTTCAGGGAC...AGATGGCCCAGTAAGCAACTCTACAAACATTAGAACATTTTGAGGTAGACAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306735.10
CDS-3UTR CAA 90 bp TTTAGATACACGGAAAAGCTAGAAAATGTTGAAGTAGCAGAAGAGCAGATGGTTTCATTTTGTACAAAGTaGTCTCTTTCATCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: FRYTEKLENVEVAEEQMVSFCTK*SLSSRG
Trigger: ACCCCGGGATGAAAGAGACAACTTTGTACAAAATGA...AACCATCTGCTCTTCTGCTACTTCAACATTTTCTAGCTTTTCCGTGTATCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS CCA 72 bp GAGCTAGAACTGCTGCAGACCCCAGGAGGCAGGAACTaGCGAGCTAGGCCGCATGGGCGCAAGAACGCGGAT +
Preference number: 6 (lower is better)
Translates to: ELELLQTPGGRN*RARPHGRKNAD
Trigger: ATCCGCGTTCTTGCGCCCATGCGGCCTAGCTCGCCAGTTCCTGCCTCCTGGGGTCTGCAGCAGTTCTAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS CCA 72 bp GCGCCTCATGATCGATCCCACACAGACTGGAGCTTGTaGTCGGCTCTGTGGTGCCGCAGGGTTGTGGGGCAT +
Preference number: 6 (lower is better)
Translates to: APHDRSHTDWSL*SALWCRRVVGH
Trigger: ATGCCCCACAACCCTGCGGCACCACAGAGCCGACCACAAGCTCCAGTCTGTGTGGGATCGATCATGAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262197.7
ENST00000306735.10
ENST00000593019.1
CDS GCA 72 bp CTGACTCACTTCAGGGGTACACAGCAGGTCTGTCAGTaGCTTATAGAGGAGGCCGTTCAGGGCCCTCAGGCG +
Preference number: 6 (lower is better)
Translates to: LTHFRGTQQVCQ*LIEEAVQGPQA
Trigger: CGCCTGAGGGCCCTGAACGGCCTCCTCTATAAGGCACTGACAGACCTGCTGTGTACCCCTGAAGTGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262197.7
ENST00000306735.10
ENST00000586847.1
CDS TCA 72 bp TTCTTGAGCCAGTTCTTGCAGGAGACAGCAGAGCAGTaGAGTCCCCGCTCGCAGCCTGGAAATAGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: FLSQFLQETAEQ*SPRSQPGNSAA
Trigger: TGCTGCGCTATTTCCAGGCTGCGAGCGGGGACTTCACTGCTCTGCTGTCTCCTGCAAGAACTGGCTCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262197.7
ENST00000306735.10
ENST00000586847.1
ENST00000591612.1
CDS TCA 72 bp AGCAGAGAGCGTTGTCTTCCAGTACGCTCGGCAGGCTaGGAAGTCTGGAGTCAGGGAAACCTTGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: SRERCLPVRSAG*EVWSQGNLGEL
Trigger: GAGCTCTCCAAGGTTTCCCTGACTCCAGACTTCTCAGCCTGCCGAGCGTACTGGAAGACAACGCTCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS TCA 72 bp AGGAGACAGAACGCACAGACCCTCACAGCTGTGCCGTaGCACTCAGTGGAGAGGCGTGACAGTGCTGAACAT +
Preference number: 6 (lower is better)
Translates to: RRQNAQTLTAVP*HSVERRDSAEH
Trigger: ATGTTCAGCACTGTCACGCCTCTCCACTGAGTGTCACGGCACAGCTGTGAGGGTCTGTGCGTTCTGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593019.1
CDS CCA 72 bp GGAAACAAGACAATTCAATGTAACGTGGACCTTGGGTaGGCACCTGGGACAGGAAGGGACAGCAGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: GNKTIQCNVDLG*APGTGRDSRQN
Trigger: GTTCTGCCTGCTGTCCCTTCCTGTCCCAGGTGCCCACCCAAGGTCCACGTTACATTGAATTGTCTTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS TCA 72 bp ACCTTGGAGAGCTCCACGTTAAGGTCATACAGCTCCTaGCTCACTTCAGGGGTACACAGCAGGTCTGTCAGT +
Preference number: 6 (lower is better)
Translates to: TLESSTLRSYSS*LTSGVHSRSVS
Trigger: ACTGACAGACCTGCTGTGTACCCCTGAAGTGAGTCAGGAGCTGTATGACCTTAACGTGGAGCTCTCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262197.7
ENST00000306735.10
CDS TCA 72 bp GGCACATTCCAACAGAGAGGCATCCTGCAAAGCACCTaGCCAGTACCCCTCAAAACTGGCACAGCCATCAAA +
Preference number: 6 (lower is better)
Translates to: GTFQQRGILQST*PVPLKTGTAIK
Trigger: TTTGATGGCTGTGCCAGTTTTGAGGGGTACTGGTCAGGTGCTTTGCAGGATGCCTCTCTGTTGGAATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS TCA 72 bp AACGCAACTTGTGCGATCTGTACAAATAACCTGATCTaGACTCATCGCCGTAGCCTTGGGCTCCAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: NATCAICTNNLI*THRRSLGLQGL
Trigger: CAGACCCTGGAGCCCAAGGCTACGGCGATGAGTTCAGATCAGGTTATTTGTACAGATCGCACAAGTTGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593019.1
CDS TCA 72 bp TTCTCAACGCAACTTGTGCGATCTGTACAAATAACCTaGTCTGAACTCATCGCCGTAGCCTTGGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: FSTQLVRSVQIT*SELIAVALGSR
Trigger: CCTGGAGCCCAAGGCTACGGCGATGAGTTCAGATCAGGTTATTTGTACAGATCGCACAAGTTGCGTTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593019.1
CDS TCA 72 bp CAATGTAGGCACGGCACATATAACCAGCGAAAGCCGTaGCCACAGATCTTTGGTACACAGCTATGGAAAACG +
Preference number: 6 (lower is better)
Translates to: QCRHGTYNQRKP*PQIFGTQLWKT
Trigger: CGTTTTCCATAGCTGTGTACCAAAGATCTGTGGTCACGGCTTTCGCTGGTTATATGTGCCGTGCCTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593019.1
CDS TCA 72 bp TGTTTAACACACACAGAACCCAGCAAAACCCCACAATaGCAGGGTATGCAAACAGGACATAGGAGCTTAGTG +
Preference number: 6 (lower is better)
Translates to: CLTHTEPSKTPQ*QGMQTGHRSLV
Trigger: CACTAAGCTCCTATGTCCTGTTTGCATACCCTGTCATTGTGGGGTTTTGCTGGGTTCTGTGTGTGTTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591612.1
CDS CCA 72 bp CTCTCCAATAAAAGGAACGAGGGCTTCTTGGAGAAATaGCTGATTTTAGGGCTGTGGTACGAAACACACAAG +
Preference number: 6 (lower is better)
Translates to: LSNKRNEGFLEK*LILGLWYETHK
Trigger: CTTGTGTGTTTCGTACCACAGCCCTAAAATCAGCCATTTCTCCAAGAAGCCCTCGTTCCTTTTATTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591612.1