RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBBP8NL (Homo sapiens)

Ensembl gene IDs: ENSG00000130701

Ensembl transcript IDs: ENST00000252998.2

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTTGGAGCTTGGCGGGCAGGGGTGGGGGTCCGAGTGGTCCGTTaGCTCCCAGAGCGTGGGCACTGCCTGGGAACGGCTGCAGTGCAC +
Preference number: 1 (lower is better)
Translates to: VLGAWRAGVGVRVVR*LPERGHCLGTAAVH
Trigger: GTGCACTGCAGCCGTTCCCAGGCAGTGCCCACGCTCTGGGAGGCAACGGACCACTCGGACCCCCACCCCTGCCCGCCAAGCTCCAAGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR GCA 90 bp CGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCTCACTaGCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGA +
Preference number: 1 (lower is better)
Translates to: RSSRVLPPTVSLHPH*QTSVCCQPTRGRPR
Trigger: TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCTTGGCGGGCAGGGGTaGGGGTCCGAGTGGTCCGTT +
Preference number: 2 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTLGGQG*GSEWSV
Trigger: AACGGACCACTCGGACCCCCACCCCTGCCCGCCAAG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR TCA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCGGTGAATCGCCAGCCTaGGACCCCTCTCGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPGESPA*DPSRSS
Trigger: GGAGGACCGAGAGGGGTCTCAGGCTGGCGATTCACC...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCTGTGCAGGGCTGCCTaGTGGTTGGATGGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTLCRAA*WLDGVP
Trigger: GGGCACACCATCCAACCAGCAGGCAGCCCTGCACAG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCAAGTGGGCCAGGATGTaGCCGTCACCGGCTCTTCGG +
Preference number: 2 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTKWARM*PSPALR
Trigger: CCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTT...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR TCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACTGTGGGTTCAGCTaGGGCTGGCTAGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLHCGFS*GWLGLL
Trigger: GAGAAGACCTAGCCAGCCTCAGCTGAACCCACAGTG...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGGCAGAGAGCTGCCCTaGGCTCACTGTGGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGGRELP*AHCGFS
Trigger: GCTGAACCCACAGTGAGCCCAGGGCAGCTCTCTGCC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCATTTCCCAGGTGGGTaGAGACGGGGTGAATCGCCA +
Preference number: 2 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLHFPGG*RRGESP
Trigger: TGGCGATTCACCCCGTCTCCACCCACCTGGGAAATG...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCGTCCAAGATTGTGCTTaGAGCTTGGCGGGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTVQDCA*SLAGRG
Trigger: ACCCCTGCCCGCCAAGCTCCAAGCACAATCTTGGAC...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGTTCTGTGCAGGGCTaGCTGCTGGTTGGATGGTGT +
Preference number: 2 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSGSVQG*LLVGWC
Trigger: ACACCATCCAACCAGCAGGCAGCCCTGCACAGAACC...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGAGAGCAGGCAGAGAGCTaGCCTGGGCTCACTGTGGGT +
Preference number: 2 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPREQAES*PGLTVG
Trigger: ACCCACAGTGAGCCCAGGGCAGCTCTCTGCCTGCTC...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CCA 90 bp AGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCCAGCCCCTCTTGAAGTaGGCCAGGATGTGCCCGTCA +
Preference number: 2 (lower is better)
Translates to: SISQVGGDGVNRQPETPLQPLLK*ARMCPS
Trigger: TGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTG...GAGAGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTTCTCCCAGGGTTCTGTaGAGGGCTGCCTGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: PSLPDICLLSAHEGASKISPRVL*RAACWL
Trigger: CAACCAGCAGGCAGCCCTGCACAGAACCCTGGGAGA...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGCTCTTCGGGGTTGCCTaGTGGTTGGGTGGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLELFGVA*WLGGVP
Trigger: GGGCACACCACCCAACCAGCAGGCAACCCCGAAGAG...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR GCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGCCGGCTCTTCGGGGTTaGCTGCTGGTTGGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEPALRG*LLVGWC
Trigger: ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGG...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR GCA 72 bp GCTTGGCGGGCAGGGGTGGGGGTCCGAGTGGTCCGTTaGCTCCCAGAGCGTGGGCACTGCCTGGGAACGGCT +
Preference number: 3 (lower is better)
Translates to: AWRAGVGVRVVR*LPERGHCLGTA
Trigger: AGCCGTTCCCAGGCAGTGCCCACGCTCTGGGAGGCAACGGACCACTCGGACCCCCACCCCTGCCCGCCAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR CCA 72 bp GGTGGGGGTCCGAGTGGTCCGTTGCCTCCCAGAGCGTaGGCACTGCCTGGGAACGGCTGCAGTGCACAGCAG +
Preference number: 3 (lower is better)
Translates to: GGGPSGPLPPRA*ALPGNGCSAQQ
Trigger: CTGCTGTGCACTGCAGCCGTTCCCAGGCAGTGCCCACGCTCTGGGAGGCAACGGACCACTCGGACCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR GCA 72 bp GTCCGAGTGGTCCGTTGCCTCCCAGAGCGTGGGCACTaGCTGGGAACGGCTGCAGTGCACAGCAGGGGTAGG +
Preference number: 3 (lower is better)
Translates to: VRVVRCLPERGH*LGTAAVHSRGR
Trigger: CCTACCCCTGCTGTGCACTGCAGCCGTTCCCAGGCAGTGCCCACGCTCTGGGAGGCAACGGACCACTCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR-3UTR CAA 90 bp CGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACGTCCAAGATTGTGCTaGGAGCTTGGCGGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: RHSGDPVFEGAAAHCLPPRPRLC*ELGGQG
Trigger: CCCCTGCCCGCCAAGCTCCAAGCACAATCTTGGACG...TGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR CCA 72 bp CGTCCAAGATTGTGCTTGGAGCTTGGCGGGCAGGGGTaGGGGTCCGAGTGGTCCGTTGCCTCCCAGAGCGTG +
Preference number: 3 (lower is better)
Translates to: RPRLCLELGGQG*GSEWSVASQSV
Trigger: CACGCTCTGGGAGGCAACGGACCACTCGGACCCCCACCCCTGCCCGCCAAGCTCCAAGCACAATCTTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR GCA 72 bp TCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTaGCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SVLQPLLKWARM*PSPALRGCLLV
Trigger: AACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
3UTR GCA 72 bp ACTGTCTCCCTCCACCCTCACTGCCAGACATCTGTTTaGTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGC +
Preference number: 3 (lower is better)
Translates to: TVSLHPHCQTSV*CQPTRGRPRLC
Trigger: GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTGGAGGGAGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCTGGCGGGCAGTGGTaGGGGCGTCCCATTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPPGGQW*GRPIGG
Trigger: CCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGG...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCGGGGTCCGGACTGGGTaGGTGGCTCGGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTGVRTG*VARGWQ
Trigger: CTGCCAGCCCCGAGCCACCCACCCAGTCCGGACCCC...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCGCCCCGGGCTCGCTGTaGACCCTGGTGCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPAPGSL*TLVQAG
Trigger: GCCAGCCTGCACCAGGGTCCACAGCGAGCCCGGGGC...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCTGGCCCGGGCCCCTCTaGGCTGGGGTTGTGGAGACG +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTWPGPL*AGVVET
Trigger: CGTCTCCACAACCCCAGCGCAGAGGGGCCCGGGCCA...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCGGGCCCCTCTGCGCTaGGGTTGTGGAGACGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTRAPLR*GCGDAC
Trigger: GCAGGCGTCTCCACAACCCCAGCGCAGAGGGGCCCG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCGTGGGGGCGTCCCATTaGCGGGGCCTCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRVGASH*RGLGRQ
Trigger: CTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCAC...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGCAGCCTCTGTCCTCTaGGCGCGGCCCGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPAASVL*ARPGPA
Trigger: TGCAGGCCCGGGCCGCGCCCAGAGGACAGAGGCTGC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCCCTCCAGACAGGCCTaGTGCGGCCAGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTPSRQA*CGQSCP
Trigger: AGGGCAGCTCTGGCCGCAGCAGGCCTGTCTGGAGGG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCCCGGTCTTCGAGGGTaGTGCCGCCCACTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLPGLRG*CRPLSP
Trigger: GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGG...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCGCTCATACGCTGGGCTaGGTGGGCTGCTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTAHTLG*VGCSWR
Trigger: CCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGC...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTCAGGCGGCTGTGGGTaGGGAGGCGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRSGGCG*GGGCGW
Trigger: CCACCCACAGCCGCCTCCCCACCCACAGCCGCCTGA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCAGGGGTAGGGCTGGGCTaGAGCCTGAGTGATCCCGCC +
Preference number: 4 (lower is better)
Translates to: RHSGDPVFEGAAAHCLPPGVGLG*SLSDPA
Trigger: GGCGGGATCACTCAGGCTCCAGCCCAGCCCTACCCC...TGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTGGGTGGGGGTCCGAGTaGTCCGTTGCCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPGWGSE*SVASQS
Trigger: GCTCTGGGAGGCAACGGACCACTCGGACCCCCACCC...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCAGCGGCAGGGCTGAGTaGCCCATGCTGGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAASGRAE*PMLAGR
Trigger: CCGGCCGGCCAGCATGGGTCACTCAGCCCTGCCGCT...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCTGGGTGGAGACGGGGTaGATCGCCAGCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLWVETG*IASLRP
Trigger: GGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCA...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCAGGAGCAGGTGCAGTaGCCCCTCCAGGCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VTQGTRSSRVLPPTVSLHQEQVQ*PLQAKV
Trigger: GACCTTCGCCTGGAGGGGGCACTGCACCTGCTCCTG...GTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGCTCCTGGGTGCAGATaGACTCAGGCCCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSAPGCR*TQAPPR
Trigger: CCGGGGAGGGGCCTGAGTGCATCTGCACCCAGGAGC...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTAGGCCCACGCCCTGGTaGTCTTCCTCAGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPRPTPW*SSSASS
Trigger: CGAGGAGGCTGAGGAAGACCACCAGGGCGTGGGCCT...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCGTAGGCCCACGCCCTaGTGGTCTTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPRRPTP*WSSSAS
Trigger: GGAGGCTGAGGAAGACCACCAGGGCGTGGGCCTACG...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCGCCGCACCACGGCAATaGTCCCGTGCAGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLAAPRQ*SRAAGW
Trigger: CCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGC...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGAGCTTCGGGGCCTCATaGGTCATGGCGGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSSFGAS*VMAEGR
Trigger: CCGGCCCTCCGCCATGACCCATGAGGCCCCGAAGCT...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTGCCCGCCAGGGCACTaGGCAGCCCCAGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRCPPGH*AAPAVL
Trigger: CAGAACTGCTGGGGCTGCCCAGTGCCCTGGCGGGCA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCCCCTGCCCGTGCTCCTaGGTGCAGATGCACTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPPCPCS*VQMHSG
Trigger: GCCTGAGTGCATCTGCACCCAGGAGCACGGGCAGGG...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGTCCTCGGCGTCCCTTaGGCTCCCGGGCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGVLGVP*APGPLS
Trigger: ACTGAGGGGCCCGGGAGCCCAAGGGACGCCGAGGAC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGCTTGGCGGGCAGGGGTaGGGGTCCGAGTGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPLGGQG*GSEWSV
Trigger: AACGGACCACTCGGACCCCCACCCCTGCCCGCCAAG...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp CGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACTGGAGAGGACAGGCTaGGCTGGGACCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RHSGDPVFEGAAAHCLPPLERTG*AGTLEV
Trigger: CACTTCCAGGGTCCCAGCTCAGCCTGTCCTCTCCAG...TGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCGAGCTCTCGAACTCCTaGTGCCGCTTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPELSNS*CRFLAS
Trigger: GCTGGCCAGGAAGCGGCAGCAGGAGTTCGAGAGCTC...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTTCCAGGCGAAGGTCCTaGATGCCCGCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCSRRRS*MPARAL
Trigger: CAGTGCCCTGGCGGGCATGCAGGACCTTCGCCTGGA...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTGCCCTAGCCCGCAGCTaGTGCTGGGCCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSISQVGGDGVNRQPETPALARS*CWARSR
Trigger: CCTGCTCCTGGCCCAGCAGCAGCTGCGGGCTAGGGC...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCGCTGTGGACCCTGGTaGAGGCTGGCTAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLRCGPW*RLARSP
Trigger: AGGAGACCTAGCCAGCCTGCACCAGGGTCCACAGCG...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCTCTTCGGGGTTGCCTaGTGGTTGGGTGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VTQGTRSSRVLPPTVSLHLFGVA*WLGGVP
Trigger: GGGCACACCACCCAACCAGCAGGCAACCCCGAAGAG...GTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGTCCGAGTGGTCCGTTaGCTCCCAGAGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPVRVVR*LPERGH
Trigger: GTGCCCACGCTCTGGGAGGCAACGGACCACTCGGAC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATGGGTGGGCTGCTCCTaGCGGGCAGTGGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPRWVGCS*RAVVGA
Trigger: CGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCA...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTGTGGGCTGGCCCCTTaGCCTGACACTGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRCGLAP*PDTACP
Trigger: AGGGCAGGCAGTGTCAGGCCAAGGGGCCAGCCCACA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTCGGCCAGAGCTGCCCTaGTCCCCTCATTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCRPELP*SPHSQG
Trigger: GCCCTGAGAATGAGGGGACCAGGGCAGCTCTGGCCG...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCGAGGACAGGCTGAGCTaGGACCCTGGAAGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTEDRLS*DPGSGR
Trigger: ACGCCCACTTCCAGGGTCCCAGCTCAGCCTGTCCTC...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCCGCTTCCTCTTCCGTaGTGGACCCTGCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRPLPLP*WTLPVL
Trigger: GAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGG...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCACCTCTGTCGACCTCTaGGCGGAGTCCCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETTSVDL*AESPTL
Trigger: GAGCGTGGGGGACTCCGCGCAGAGGTCGACAGAGGT...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGACAGTCCTGCGTGGCTaGAGCCTCTGTCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSTVLRG*SLCPLG
Trigger: GCCCAGAGGACAGAGGCTGCAGCCACGCAGGACTGT...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACTCTAGGGCACAGTCCTaGGTGGCTGCAGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VTQGTRSSRVLPPTVSLHSRAQS*VAAASV
Trigger: GACAGAGGCTGCAGCCACGCAGGACTGTGCCCTAGA...GTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCGGGCTGAGTGACCCATaGTGGCCGGCCGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAAGLSDP*WPAGLG
Trigger: TCCCAAGCCGGCCGGCCAGCATGGGTCACTCAGCCC...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCGGTGCCATTGCTGAGTaGCTGGGGACTGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTGAIAE*LGTASQ
Trigger: CTGACTCGCAGTCCCCAGGCACTCAGCAATGGCACC...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGGTGGACCCTGCCCGTaGTCCTGGGTGCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGGGPCP*SWVQMH
Trigger: GTGCATCTGCACCCAGGAGCACGGGCAGGGTCCACC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCTGTGCAGGGCTGCCTaGTGGTTGGATGGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRLCRAA*WLDGVP
Trigger: GGGCACACCATCCAACCAGCAGGCAGCCCTGCACAG...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCTCCCAGGGTTCTGTaGAGGGCTGCCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPSPRVL*RAACWL
Trigger: CAACCAGCAGGCAGCCCTGCACAGAACCCTGGGAGA...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTCCGGCTCTTCGGGGTTaGCTGCTGGTTGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCPALRG*LLVGWC
Trigger: ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGG...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACGGGCGTCCAAGATTGTaGTTGGAGCTTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTQGTRSSRVLPPTVSLHGRPRL*LELGGQ
Trigger: CTGCCCGCCAAGCTCCAAGCACAATCTTGGACGCCC...GTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTTCTGCGCTGGGGTTGTaGAGACGCCTGCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPSALGL*RRLQPL
Trigger: TAGAGGCTGCAGGCGTCTCCACAACCCCAGCGCAGA...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGAGCTCCTCGATCCTCTaGGCGTCCCGGCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPSSSIL*ASRHLS
Trigger: AGAGAGGTGCCGGGACGCCCAGAGGATCGAGGAGCT...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTTCCTGGCCAGCTCCTaGGTGACCATGCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRFLASS*VTMQRS
Trigger: CGACCGCTGCATGGTCACCCAGGAGCTGGCCAGGAA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCTCGTGGCCTCCCGGTaGCTTCTCTGTGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLLVASR*LLCDGL
Trigger: AAGGCCATCACAGAGAAGCCACCGGGAGGCCACGAG...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTCCTCAGCCTCCTCGTaGCCTCCCGGTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRSSASS*PPGGFS
Trigger: AGAGAAGCCACCGGGAGGCCACGAGGAGGCTGAGGA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCTGGGGGCTCATGTCTaGGGCTCGCGACTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETLGAHV*GSRLRQ
Trigger: CTGCCTGAGTCGCGAGCCCCAGACATGAGCCCCCAG...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGCCACGCTCATACGCTaGGCTGGGTGGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGATLIR*AGWAAP
Trigger: AGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCGGGCCTCATGGGTCATaGCGGAGGGCCGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCGPHGS*RRAGRP
Trigger: GGGCCTCCCGGCCCTCCGCCATGACCCATGAGGCCC...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGAGTCAGGGGTCCGGACTaGGTGGGTGGCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPRVRGPD*VGGSGL
Trigger: CAGCCCCGAGCCACCCACCCAGTCCGGACCCCTGAC...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTAGGGGTCCATGGGAGTaGAAGCCTCCTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPRGPWE*KPPPAL
Trigger: CAGAGCAGGAGGAGGCTTCCACTCCCATGGACCCCT...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGCACTTCAGCCTTGCTaGGCTCTGGGTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSALQPC*ALGGRP
Trigger: TGGACGGCCACCCAGAGCCCAGCAAGGCTGAAGTGC...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTCCCAGGGGCTGCTGTTaGGGGAGGGACTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGPRGCC*GRDCGP
Trigger: AGGACCACAGTCCCTCCCCCAACAGCAGCCCCTGGG...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTGCTCGCTGTGGACCCTaGTGCAGGCTGGCTAGGTCT +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCARCGP*CRLARS
Trigger: AGACCTAGCCAGCCTGCACCAGGGTCCACAGCGAGC...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGCAGAGAGCTGCCCTaGGCTCACTGTGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSGRELP*AHCGFS
Trigger: GCTGAACCCACAGTGAGCCCAGGGCAGCTCTCTGCC...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCAGCCCCTCTTGAAGTaGGCCAGGATGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTQPLLK*ARMCPS
Trigger: TGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTGGTGAATCGCCAGCCTaGGACCCCTCTCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSISQVGGDGVNRQPETPGESPA*DPSRSS
Trigger: GGAGGACCGAGAGGGGTCTCAGGCTGGCGATTCACC...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCATGCGCTGCAGGTTCTaGAGGTGGGAGCTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTMRCRF*RWELSN
Trigger: GTTCGAGAGCTCCCACCTGCAGAACCTGCAGCGCAT...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGACGGCAATGGTCCCGTaGAGCTGGTTGGAGATGCGC +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSTAMVP*SWLEMR
Trigger: GCGCATCTCCAACCAGCTGCACGGGACCATTGCCGT...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCCCTGCAGGCTGTGTGTaGCGCCCTCCAGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAAPAGCV*RPPDRP
Trigger: AGGCCTGTCTGGAGGGCGGCACACACAGCCTGCAGG...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGTCAGCACTTCAGCCTTaGTGGGCTCTGGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSSALQP*WALGGR
Trigger: ACGGCCACCCAGAGCCCAGCAAGGCTGAAGTGCTGA...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp AGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCGCCCGTGCTCCTGGGTaGAGATGCACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SISQVGGDGVNRQPETPLARAPG*RCTQAP
Trigger: AGGGGCCTGAGTGCATCTGCACCCAGGAGCACGGGC...GAGAGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTGGTTCTGTGCAGGGCTaGCTGCTGGTTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPGSVQG*LLVGWC
Trigger: ACACCATCCAACCAGCAGGCAGCCCTGCACAGAACC...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTAGGCAGGGTGGCCCCTaGGGAGATTTTGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGRQGGP*GDFGHW
Trigger: CCAGTGGCCAAAATCTCCCCAGGGGCCACCCTGCCT...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTTGGTTGGAGATGCGCTaGGGGCTCATGTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCWLEMR*GLMSGA
Trigger: AGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCA...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTCGGCAGGGCAAGCCTaGGACCCAGGCCGCACCACG +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCSAGQA*DPGRTT
Trigger: CGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTGCCGA...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGGGCACAGTCCTGCGTaGCTGCAGCCTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGGHSPA*LQPLSS
Trigger: AGAGGACAGAGGCTGCAGCCACGCAGGACTGTGCCC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCCTGAGTGACCCATGCTaGCCGGCCGGCTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAALSDPC*PAGLGV
Trigger: CACTCCCAAGCCGGCCGGCCAGCATGGGTCACTCAG...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCGCCCACCTCGCTGCCTaGGGTGTCTGTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETAHLAA*GVCLIQ
Trigger: CTGGATGAGACAGACACCCCAGGCAGCGAGGTGGGC...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCTTCCTCTTCCGTGGTaGACCCTGCCCGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETLPLPW*TLPVLL
Trigger: CAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAG...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTTTGGGGGAGGGACTGTaGTCCTCGGCGTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSISQVGGDGVNRQPETPLGEGL*SSASLG
Trigger: CCCAAGGGACGCCGAGGACCACAGTCCCTCCCCCAA...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTATTGTGCTTGGAGCTTaGCGGGCAGGGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGIVLGA*RAGVGV
Trigger: GACCCCCACCCCTGCCCGCCAAGCTCCAAGCACAAT...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp AGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCCCGGTGGCTTCTCTGTaGTGGCCTTCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SISQVGGDGVNRQPETPLPVASL*WPSSHQ
Trigger: CTGGTGGCTGGAAGGCCATCACAGAGAAGCCACCGG...GAGAGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCCCTTGGTGCCATTGCTaGGTGCCTGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAAPWCHC*VPGDCE
Trigger: CTCGCAGTCCCCAGGCACTCAGCAATGGCACCAAGG...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGCCTGCAGCCTCTACTaGCCCTCTGTGTCCATCATG +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPACSLY*PSVSIM
Trigger: CATGATGGACACAGAGGGGCAGTAGAGGCTGCAGGC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp TGGGTTCAGCTGAGGCTGGCTAGGTCTTCTCCCAGGGTTCTGTGCAGGGCTGCCCTCTCGAACTCCTGCTaGCGCTTCCTGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WVQLRLARSSPRVLCRAALSNSC*RFLASS
Trigger: GGAGCTGGCCAGGAAGCGGCAGCAGGAGTTCGAGAG...GGCAGCCCTGCACAGAACCCTGGGAGAAGACCTAGCCAGCCTCAGCTGAACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTAGGATGAAGATGCGCTaGAGGTTCTGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LRHSGDPVFEGAAAHCLPRMKMR*RFCRWE
Trigger: CTCCCACCTGCAGAACCTGCAGCGCATCTTCATCCT...AGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGGCGAAGGTCCTGCATaGCCGCCAGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKIGEGPA*PPGHWA
Trigger: TGCCCAGTGCCCTGGCGGGCATGCAGGACCTTCGCC...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTCTAGCCCGCAGCTGCTaGTGGGCCAGGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKILARSC*WARSRC
Trigger: GCACCTGCTCCTGGCCCAGCAGCAGCTGCGGGCTAG...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTGTGGAAGCCTCCTCCTaGTCTGGCACTCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QSISQVGGDGVNRQPETPVEASS*SGTLVP
Trigger: GGGGACCAGAGTGCCAGAGCAGGAGGAGGCTTCCAC...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTCCTCTGTGTCCATCATaGCTCCTGGCCCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCPLCPS*LLALPQ
Trigger: TTGAGGCAGGGCCAGGAGCCATGATGGACACAGAGG...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCATTGCTGAGTGCCTaGGGACTGCGAGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETPLLSA*GLRVRG
Trigger: ACCCCTGACTCGCAGTCCCCAGGCACTCAGCAATGG...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTGCTCTGGCACTCTaGTCCCCTTGGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETPALAL*SPWCHC
Trigger: GCAATGGCACCAAGGGGACCAGAGTGCCAGAGCAGG...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGAAGCCTTGCTGGGCTCTaGGTGGCCGTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPRSLAGL*VAVQVR
Trigger: CCTGACCTGGACGGCCACCCAGAGCCCAGCAAGGCT...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTGGCCAGCTCCTGGGTaGCCATGCAGCGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCWPAPG*PCSGRT
Trigger: TGTGCGACCGCTGCATGGTCACCCAGGAGCTGGCCA...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGGGGCTGGAGCCTGAGTaGTCCCGCCTCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEGLEPE*SRLQSP
Trigger: TGGGGACTGGAGGCGGGATCACTCAGGCTCCAGCCC...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCCCAGAGCGTGGGCACTaGCTGGGAACGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCPERGH*LGTAAV
Trigger: CACTGCAGCCGTTCCCAGGCAGTGCCCACGCTCTGG...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGGAGCTGGTGGTTCTTaGAGAAGAGCTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPGAGGS*RRAPRS
Trigger: GGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTTGTTCCCGGAGCTGGTaGTTCTTGGAGAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCCSRSW*FLEKSS
Trigger: GGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACA...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCGGAGATTTTGGCCACTaGAGATGTCCTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRGDFGH*RCPVPC
Trigger: GCAGGGCACAGGACATCTCCAGTGGCCAAAATCTCC...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCATCTTCTGTACTGCCTaGAGAGGACAGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLIFCTA*RGQAEL
Trigger: CAGCTCAGCCTGTCCTCTCCAGGCAGTACAGAAGAT...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACAGTTCGTCGGACTCTaGTCTCAGCACTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RHSGDPVFEGAAAHCLPPQFVGL*SQHFSL
Trigger: AAGGCTGAAGTGCTGAGACCAGAGTCCGACGAACTG...TGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGGTAGTGGCCTCCGCCTaGGAGCTCAGGCCCACCTCG +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEVVASA*ELRPTS
Trigger: CGAGGTGGGCCTGAGCTCCCAGGCGGAGGCCACTAC...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGACCCTGGTGCAGGCTaGCTAGGTCTCCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKIDPGAG*LGLLPG
Trigger: CCCTGGGAGGAGACCTAGCCAGCCTGCACCAGGGTC...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGTCCAGAAGCTTGTTCTaGAGGCCCAGGACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSSRSLF*RPRTSF
Trigger: GAAGGAAGTCCTGGGCCTGCAGAACAAGCTTCTGGA...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCTCCTTCAGTGTCTTCTaGTGTTCCCGGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PQSISQVGGDGVNRQPETSFSVF*CSRSWW
Trigger: CCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGA...GGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp AGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCTGCCAGACATCTGTTTaGTGTCAGCCCACGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SISQVGGDGVNRQPETPLCQTSV*CQPTRG
Trigger: CCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCA...GAGAGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGGGTCTTCGAGGGTGCTaGCGCCCACTGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEGLRGC*RPLSPS
Trigger: GGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACC...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTCCCGTGCAGCTGGTTaGAGATGCGCTGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCSRAAG*RCAGGS
Trigger: TGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGA...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGAAGCCTCCTCCTGCTCTaGCACTCTGGTCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPRSLLLL*HSGPLG
Trigger: ACCAAGGGGACCAGAGTGCCAGAGCAGGAGGAGGCT...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCGGCGTGAGGGGTCCATaGGAGTGGAAGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCGVRGP*EWKPPP
Trigger: AGGAGGAGGCTTCCACTCCCATGGACCCCTCACGCC...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp AGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCGTCCCGGCACCTCTCTaGGTTCAGTTCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SISQVGGDGVNRQPETPLVPAPL*VQFQKL
Trigger: AAGCTTCTGGAACTGAACTCAGAGAGGTGCCGGGAC...GAGAGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGGAGCAGGCAGAGAGCTaGCCTGGGCTCACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEEQAES*PGLTVG
Trigger: ACCCACAGTGAGCCCAGGGCAGCTCTCTGCCTGCTC...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGATGGTCCCGTGCAGCTaGTTGGAGATGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEMVPCS*LEMRWG
Trigger: CCCCCAGCGCATCTCCAACCAGCTGCACGGGACCAT...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTAGGCCTCTGCTTCTCTaGCCTTCAGGTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKIRPLLL*PSGPGA
Trigger: GGCTCCAGGACCTGAAGGCCAGAGAAGCAGAGGCCT...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGCCTTCTCCCTCTGGATaGCTTTTTGGAGGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSPSPSG*LFGGFV
Trigger: GACAAAGCCTCCAAAAAGCCATCCAGAGGGAGAAGG...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp TCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCGTTTCCTTCTCCCTCTaGATGGCTTTTTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SVTQGTRSSRVLPPTVSLVSFSL*MAFWRL
Trigger: AAGCCTCCAAAAAGCCATCCAGAGGGAGAAGGAAAC...GAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGACATTTCCCAGGTGGGTaGAGACGGGGTGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: HPHCQTSVCCQPTRGRPRHFPGG*RRGESP
Trigger: TGGCGATTCACCCCGTCTCCACCCACCTGGGAAATG...TCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR TCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCCACTGTGGGTTCAGCTaGGGCTGGCTAGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCHCGFS*GWLGLL
Trigger: GAGAAGACCTAGCCAGCCTCAGCTGAACCCACAGTG...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTCCATCATGGCTCCTaGCCCTGCCTCAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKIVHHGS*PCLNLC
Trigger: ACAGAGGTTGAGGCAGGGCCAGGAGCCATGATGGAC...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTAGGACTTCCTTCTCGTaGATCTCCTTCAGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGRTSFS*ISFSLF
Trigger: GAACAGGCTGAAGGAGATCCACGAGAAGGAAGTCCT...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTCTCTGGATGGCTTTTTaGAGGCTTTGTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSISQVGGDGVNRQPETPLWMAF*RLCPQA
Trigger: AGCCTGGGGACAAAGCCTCCAAAAAGCCATCCAGAG...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCGTCCAAGATTGTGCTTaGAGCTTGGCGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCVQDCA*SLAGRG
Trigger: ACCCCTGCCCGCCAAGCTCCAAGCACAATCTTGGAC...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CCA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTGCTGTTCCCGGAGCTaGTGGTTCTTGGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCCCSRS*WFLEKS
Trigger: GCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCA...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTACTGGAGATGTCCTGTaGCCTGCTGGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLPDICLLSAHEGASKITGDVL*PAGFSS
Trigger: AGAAGAAAAGCCAGCAGGGCACAGGACATCTCCAGT...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR GCA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGTCCCTCCACCCTCACTaGCAGACATCTGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLESLHPH*QTSVCC
Trigger: ACAGCAAACAGATGTCTGGCAGTGAGGGTGGAGGGA...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GGCTGGGTGGGCTGCTCCTGGCGGGCAGTGGTGGGGGCGTCCCATTaGCGGGGCCTCGGTCGGCAGGGCAAGCCTGGGACCCAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: GWVGCSWRAVVGASH*RGLGRQGKPGTQAA
Trigger: TGCGGCCTGGGTCCCAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GCCACGCTCATACGCTGGGCTGGGTGGGCTGCTCCTGGCGGGCAGTaGTGGGGGCGTCCCATTGGCGGGGCCTCGGTCGGCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: ATLIRWAGWAAPGGQ*WGRPIGGASVGRAS
Trigger: GCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp CCAGGGAGAGGCCACGCTCATACGCTGGGCTGGGTGGGCTGCTCCTaGCGGGCAGTGGTGGGGGCGTCCCATTGGCGGGGCCTCGGTCGG +
Preference number: 5 (lower is better)
Translates to: PGRGHAHTLGWVGCS*RAVVGASHWRGLGR
Trigger: CCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGCCTCTCCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp GCGGCCCGGGCCTGCAGGCTGTGTGTGCCGCCCTCCAGACAGGCCTaGTGCGGCCAGAGCTGCCCTGGTCCCCTCATTCTCAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: AARACRLCVPPSRQA*CGQSCPGPLILRAL
Trigger: GAGGGCCCTGAGAATGAGGGGACCAGGGCAGCTCTGGCCGCAGCAGGCCTGTCTGGAGGGCGGCACACACAGCCTGCAGGCCCGGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GGTGGGGGCGTCCCATTGGCGGGGCCTCGGTCGGCAGGGCAAGCCTaGGACCCAGGCCGCACCACGGCAATGGTCCCGTGCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GGGVPLAGPRSAGQA*DPGRTTAMVPCSWL
Trigger: CAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp ACGCTCATACGCTGGGCTGGGTGGGCTGCTCCTGGCGGGCAGTGGTaGGGGCGTCCCATTGGCGGGGCCTCGGTCGGCAGGGCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TLIRWAGWAAPGGQW*GRPIGGASVGRASL
Trigger: CAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp AGCTGTCCAGGGAGAGGCCACGCTCATACGCTGGGCTGGGTGGGCTaGTCCTGGCGGGCAGTGGTGGGGGCGTCCCATTGGCGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SCPGRGHAHTLGWVG*SWRAVVGASHWRGL
Trigger: GAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGCCTCTCCCTGGACAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp CCCCTTGGCCTGACACTGCCTGCCCTGGCCCTAGCCCGCAGCTGCTaGTGGGCCAGGAGCAGGTGCAGTGCCCCCTCCAGGCGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PLGLTLPALALARSC*WARSRCSAPSRRRS
Trigger: GGACCTTCGCCTGGAGGGGGCACTGCACCTGCTCCTGGCCCAGCAGCAGCTGCGGGCTAGGGCCAGGGCAGGCAGTGTCAGGCCAAGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GGACCCTGGTGCAGGCTGGCTAGGTCTCCTCCCAGGGGCTGCTGTTaGGGGAGGGACTGTGGTCCTCGGCGTCCCTTGGGCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GPWCRLARSPPRGCC*GRDCGPRRPLGSRA
Trigger: GGCCCGGGAGCCCAAGGGACGCCGAGGACCACAGTCCCTCCCCCAACAGCAGCCCCTGGGAGGAGACCTAGCCAGCCTGCACCAGGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp CCAGGCTCCGAGGCCCGCTTCCTCTTCCGTGGTGGACCCTGCCCGTaGTCCTGGGTGCAGATGCACTCAGGCCCCTCCCCGGTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: PGSEARFLFRGGPCP*SWVQMHSGPSPVVL
Trigger: GAGCACGACCGGGGAGGGGCCTGAGTGCATCTGCACCCAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGGGCCTCGGAGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp AGGAGGCAGAGCCGGTCCACCTTCGGGGAGAGCTTCGGGGCCTCATaGGTCATGGCGGAGGGCCGGGAGGCCCGCAGGAAGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRQSRSTFGESFGAS*VMAEGREARRKLSR
Trigger: CCTGGACAGCTTCCTGCGGGCCTCCCGGCCCTCCGCCATGACCCATGAGGCCCCGAAGCTCTCCCCGAAGGTGGACCGGCTCTGCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp TCTGAGCCGACTGGTAGGGAGGGCAGCATCTCCCCGGGTGTGGGCTaGCCCCTTGGCCTGACACTGCCTGCCCTGGCCCTAGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SEPTGREGSISPGVG*PLGLTLPALALARS
Trigger: GCTGCGGGCTAGGGCCAGGGCAGGCAGTGTCAGGCCAAGGGGCCAGCCCACACCCGGGGAGATGCTGCCCTCCCTACCAGTCGGCTCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGGTGGGGGCGTCCCATaGGCGGGGCCTCGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPGGGVP*AGPRSA
Trigger: TGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp GCAGGGCAAGCCTGGGACCCAGGCCGCACCACGGCAATGGTCCCGTaGAGCTGGTTGGAGATGCGCTGGGGGCTCATGTCTGGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: AGQAWDPGRTTAMVP*SWLEMRWGLMSGAR
Trigger: GCGAGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGTCCGAGGTGCCCTCCTaGGCCCGGGGCTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSSEVPS*ARGLGL
Trigger: CAGGCCCAAGCCCCGGGCCAAGGAGGGCACCTCGGA...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTGGTCCTCGGCGTCCCTaGGGCTCCCGGGCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGGPRRP*GSRAPQ
Trigger: CTGAGGGGCCCGGGAGCCCAAGGGACGCCGAGGACC...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GCCCACGCCCTGGTGGTCTTCCTCAGCCTCCTCGTGGCCTCCCGGTaGCTTCTCTGTGATGGCCTTCCAGCCACCAGGGGAGGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AHALVVFLSLLVASR*LLCDGLPATRGGEQ
Trigger: CTGCTCCCCTCCCCTGGTGGCTGGAAGGCCATCACAGAGAAGCCACCGGGAGGCCACGAGGAGGCTGAGGAAGACCACCAGGGCGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp CTCGGTCGGCAGGGCAAGCCTGGGACCCAGGCCGCACCACGGCAATaGTCCCGTGCAGCTGGTTGGAGATGCGCTGGGGGCTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: LGRQGKPGTQAAPRQ*SRAAGWRCAGGSCL
Trigger: CAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTGCCGACCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp TCCGAGGCCCGCTTCCTCTTCCGTGGTGGACCCTGCCCGTGCTCCTaGGTGCAGATGCACTCAGGCCCCTCCCCGGTCGTGCTCGTAGTG +
Preference number: 5 (lower is better)
Translates to: SEARFLFRGGPCPCS*VQMHSGPSPVVLVV
Trigger: CACTACGAGCACGACCGGGGAGGGGCCTGAGTGCATCTGCACCCAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGGGCCTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp TCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCCCCTCTGCGCTGGGGTaGTGGAGACGCCTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SLRGPGLRGCCRPLSPSTPSALG*WRRLQP
Trigger: AGGCTGCAGGCGTCTCCACAACCCCAGCGCAGAGGG...GGTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp CAAGCCTGGGACCCAGGCCGCACCACGGCAATGGTCCCGTGCAGCTaGTTGGAGATGCGCTGGGGGCTCATGTCTGGGGCTCGCGACTCA +
Preference number: 5 (lower is better)
Translates to: QAWDPGRTTAMVPCS*LEMRWGLMSGARDS
Trigger: TGAGTCGCGAGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp TCCTGCTCTGGCACTCTGGTCCCCTTGGTGCCATTGCTGAGTGCCTaGGGACTGCGAGTCAGGGGTCCGGACTGGGTGGGTGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SCSGTLVPLVPLLSA*GLRVRGPDWVGGSG
Trigger: CCCCGAGCCACCCACCCAGTCCGGACCCCTGACTCGCAGTCCCCAGGCACTCAGCAATGGCACCAAGGGGACCAGAGTGCCAGAGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp GCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTTGGGTGGTGTGTCCCGTGCAGCTGGTaGGAGATGCGCTGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: ARMCPSPALRGCLLVGWCVPCSW*EMRWGL
Trigger: GAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGAC...ACACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp GTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCACCTCAGCACTTCAGCCTaGCTGGGCTCTGGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: VTQGTRSSRVLPPTVSLHLSTSA*LGSGWP
Trigger: CGGCCACCCAGAGCCCAGCAAGGCTGAAGTGCTGAG...GTGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTGAGACCCCTCTCGGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGGGTCCGAGTGGTCCGTaGCCTCCCAGAGCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LRPLSVLQPLLKWARMCPGPSGP*PPRAWA
Trigger: TGCCCACGCTCTGGGAGGCAACGGACCACTCGGACC...CGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACCGAGAGGGGTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp CGGGCCCCTCTGCGCTGGGGTTGTGGAGACGCCTGCAGCCTCTACTaGCCCTCTGTGTCCATCATGGCTCCTGGCCCTGCCTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: RAPLRWGCGDACSLY*PSVSIMAPGPASTS
Trigger: AGAGGTTGAGGCAGGGCCAGGAGCCATGATGGACACAGAGGGGCAGTAGAGGCTGCAGGCGTCTCCACAACCCCAGCGCAGAGGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp TTTGGAGGCTTTGTCCCCAGGCTCCGAGGCCCGCTTCCTCTTCCGTaGTGGACCCTGCCCGTGCTCCTGGGTGCAGATGCACTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FGGFVPRLRGPLPLP*WTLPVLLGADALRP
Trigger: GGGCCTGAGTGCATCTGCACCCAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGGGCCTCGGAGCCTGGGGACAAAGCCTCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCTCCAGGCTTTTTGGAGGCTTaGTCCCCAGGCTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RHSGDPVFEGAAAHCLPPGFLEA*SPGSEA
Trigger: GGCCTCGGAGCCTGGGGACAAAGCCTCCAAAAAGCC...TGGAGGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp CTGTGCCCTGCTGGCTTTTCTTCTCCCCGTAGGCCCACGCCCTGGTaGTCTTCCTCAGCCTCCTCGTGGCCTCCCGGTGGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LCPAGFSSPRRPTPW*SSSASSWPPGGFSV
Trigger: CACAGAGAAGCCACCGGGAGGCCACGAGGAGGCTGAGGAAGACCACCAGGGCGTGGGCCTACGGGGAGAAGAAAAGCCAGCAGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp GGTCCTCCAGCCCCTCTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGTCCCCTTGGTGCCATaGCTGAGTGCCTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: GPPAPLEVGQDVPVTGSSVPLVP*LSAWGL
Trigger: CAGTCCCCAGGCACTCAGCAATGGCACCAAGGGGAC...CGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAGAGGGGCTGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTACCGGCTCTTCGGGGTaGCCTGCTGGTTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGTGSSG*PAGWVV
Trigger: CACCACCCAACCAGCAGGCAACCCCGAAGAGCCGGT...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp TCTCCGTCACTCAGGGGACCCGGTCTTCGAGGGTGCTGCCGCCCACTGTCTCCCCGGAGCTGGTGGTTCTaGGAGAAGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: SPSLRGPGLRGCCRPLSPRSWWF*EKSSSI
Trigger: GATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCG...GGGAGACAGTGGGCGGCAGCACCCTCGAAGACCGGGTCCCCTGAGTGACGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTAGGGGGCGTCCAAGATaGTGCTTGGAGCTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGRGRPR*CLELGG
Trigger: CCCGCCAAGCTCCAAGCACAATCTTGGACGCCCCCT...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp CACCTCGCTGCCTGGGGTGTCTGTCTCATCCAGTTCGTCGGACTCTaGTCTCAGCACTTCAGCCTTGCTGGGCTCTGGGTGGCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: HLAAWGVCLIQFVGL*SQHFSLAGLWVAVQ
Trigger: CTGGACGGCCACCCAGAGCCCAGCAAGGCTGAAGTGCTGAGACCAGAGTCCGACGAACTGGATGAGACAGACACCCCAGGCAGCGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCCAGCCTGAGACCCCTGAGAGGTCCAGGGGCTaGTCTAGGGCACAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QSISQVGGDGVNRQPETPERSRG*SRAQSC
Trigger: GCAGGACTGTGCCCTAGACAAGCCCCTGGACCTCTC...AGGGGTCTCAGGCTGGCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS TCA 90 bp GCCTCCCTGTGTCTTCATCTTCTGTACTGCCTGGAGAGGACAGGCTaGGCTGGGACCCTGGAAGTGGGCGTGAGGGGTCCATGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ASLCLHLLYCLERTG*AGTLEVGVRGPWEW
Trigger: CCACTCCCATGGACCCCTCACGCCCACTTCCAGGGTCCCAGCTCAGCCTGTCCTCTCCAGGCAGTACAGAAGATGAAGACACAGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTTGAAGTGGGCCAGGATGTGCCCGTCACCGGCTCTTCGGGGTTGCCTGCTGGTCCTCTGGATGGCTTTTaGGAGGCTTTGTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LEVGQDVPVTGSSGLPAGPLDGF*EALSPG
Trigger: GCCTGGGGACAAAGCCTCCAAAAAGCCATCCAGAGG...ACCAGCAGGCAACCCCGAAGAGCCGGTGACGGGCACATCCTGGCCCACTTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp ACCCGCAGGTTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTGGTaGTTCTTGGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: TRRFSFSVFCCSRSW*FLEKSSSILWASRH
Trigger: GTGCCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCTGCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp AGCACCCGCAGGTTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTaGTGGTTCTTGGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: STRRFSFSVFCCSRS*WFLEKSSSILWASR
Trigger: CCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCTGCGGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CTGTGGGAGGGGCCGCAGAGCATTTCCCAGGTGGGTGGAGACGGGGTGAATCGCTTCAGTTCCAGAAGCTaGTTCTGCAGGCCCAGGACT +
Preference number: 5 (lower is better)
Translates to: LWEGPQSISQVGGDGVNRFSSRS*FCRPRT
Trigger: AGTCCTGGGCCTGCAGAACAAGCTTCTGGAACTGAA...GCGATTCACCCCGTCTCCACCCACCTGGGAAATGCTCTGCGGCCCCTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCCGTCCAAGATTGTGCTaGGAGCTTGGCGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCRPRLC*ELGGQG
Trigger: CCCCTGCCCGCCAAGCTCCAAGCACAATCTTGGACG...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 90 bp GGTTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTGGTGGTTCTTaGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGGCACCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSPSVSSAVPGAGGS*RRAPRSSGRPGTSL
Trigger: CAGAGAGGTGCCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CCCTCACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTCTGCCAGACATCTGTTaGCTGTCAGCCCACGAGGGG +
Preference number: 5 (lower is better)
Translates to: PSLPDICLLSAHEGASKILPDIC*LSAHEG
Trigger: CCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAG...AATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 90 bp CGCAGCCTGTTCTCCAGCACCCGCAGGTTCTCCTTCAGTGTCTTCTaGTGTTCCCGGAGCTGGTGGTTCTTGGAGAAGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: RSLFSSTRRFSFSVF*CSRSWWFLEKSSSI
Trigger: GATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCTGCGGGTGCTGGAGAACAGGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCTTGGAGGCCCCTGGGGAGATTTaGGCCACTGGAGATGTCCTG +
Preference number: 5 (lower is better)
Translates to: QTSVCCQPTRGRPRLCLEAPGEI*ATGDVL
Trigger: CAGGACATCTCCAGTGGCCAAAATCTCCCCAGGGGC...CTCCAAGCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS-3UTR CAA 90 bp CACTGCCAGACATCTGTTTGCTGTCAGCCCACGAGGGGGCGTCCAAGATTGTGCAGCCCGTTCATCTCGTaGGTGAGGATGAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: HCQTSVCCQPTRGRPRLCSPFIS*VRMKMR
Trigger: GCGCATCTTCATCCTCACCAACGAGATGAACGGGCT...GCACAATCTTGGACGCCCCCTCGTGGGCTGACAGCAAACAGATGTCTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CAA 90 bp GGGCTGGGTGGGCTGCTCCTGGCGGGCAGTGGTGGGGGCGTCCCATaGGCGGGGCCTCGGTCGGCAGGGCAAGCCTGGGACCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: GLGGLLLAGSGGGVP*AGPRSAGQAWDPGR
Trigger: GCGGCCTGGGTCCCAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GGCTGCTCCTGGCGGGCAGTGGTGGGGGCGTCCCATTaGCGGGGCCTCGGTCGGCAGGGCAAGCCTGGGACC +
Preference number: 6 (lower is better)
Translates to: GCSWRAVVGASH*RGLGRQGKPGT
Trigger: GGTCCCAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp ATACGCTGGGCTGGGTGGGCTGCTCCTGGCGGGCAGTaGTGGGGGCGTCCCATTGGCGGGGCCTCGGTCGGC +
Preference number: 6 (lower is better)
Translates to: IRWAGWAAPGGQ*WGRPIGGASVG
Trigger: GCCGACCGAGGCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTAT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GGCCACGCTCATACGCTGGGCTGGGTGGGCTGCTCCTaGCGGGCAGTGGTGGGGGCGTCCCATTGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GHAHTLGWVGCS*RAVVGASHWRG
Trigger: GCCCCGCCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GTCCCATTGGCGGGGCCTCGGTCGGCAGGGCAAGCCTaGGACCCAGGCCGCACCACGGCAATGGTCCCGTGC +
Preference number: 6 (lower is better)
Translates to: VPLAGPRSAGQA*DPGRTTAMVPC
Trigger: GCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTGCCGACCGAGGCCCCGCCAATGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GGGAGAGGCCACGCTCATACGCTGGGCTGGGTGGGCTaGTCCTGGCGGGCAGTGGTGGGGGCGTCCCATTGG +
Preference number: 6 (lower is better)
Translates to: GRGHAHTLGWVG*SWRAVVGASHW
Trigger: CCAATGGGACGCCCCCACCACTGCCCGCCAGGAGCAGCCCACCCAGCCCAGCGTATGAGCGTGGCCTCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp AGCCGGTCCACCTTCGGGGAGAGCTTCGGGGCCTCATaGGTCATGGCGGAGGGCCGGGAGGCCCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SRSTFGESFGAS*VMAEGREARRK
Trigger: CTTCCTGCGGGCCTCCCGGCCCTCCGCCATGACCCATGAGGCCCCGAAGCTCTCCCCGAAGGTGGACCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GAGGCCCGCTTCCTCTTCCGTGGTGGACCCTGCCCGTaGTCCTGGGTGCAGATGCACTCAGGCCCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: EARFLFRGGPCP*SWVQMHSGPSP
Trigger: CGGGGAGGGGCCTGAGTGCATCTGCACCCAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp CAGGGCAAGCCTGGGACCCAGGCCGCACCACGGCAATaGTCCCGTGCAGCTGGTTGGAGATGCGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: QGKPGTQAAPRQ*SRAAGWRCAGG
Trigger: GCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGCTTGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GCCTGCAGGCTGTGTGTGCCGCCCTCCAGACAGGCCTaGTGCGGCCAGAGCTGCCCTGGTCCCCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: ACRLCVPPSRQA*CGQSCPGPLIL
Trigger: GAGAATGAGGGGACCAGGGCAGCTCTGGCCGCAGCAGGCCTGTCTGGAGGGCGGCACACACAGCCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CAA 72 bp CCAGGCCGCACCACGGCAATGGTCCCGTGCAGCTGGTaGGAGATGCGCTGGGGGCTCATGTCTGGGGCTCGC +
Preference number: 6 (lower is better)
Translates to: PGRTTAMVPCSW*EMRWGLMSGAR
Trigger: GCGAGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GCCTGGGACCCAGGCCGCACCACGGCAATGGTCCCGTaGAGCTGGTTGGAGATGCGCTGGGGGCTCATGTCT +
Preference number: 6 (lower is better)
Translates to: AWDPGRTTAMVP*SWLEMRWGLMS
Trigger: AGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GACCCAGGCCGCACCACGGCAATGGTCCCGTGCAGCTaGTTGGAGATGCGCTGGGGGCTCATGTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: DPGRTTAMVPCS*LEMRWGLMSGA
Trigger: AGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGCGGCCTGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GCTGTTGGGGGAGGGACTGTGGTCCTCGGCGTCCCTTaGGCTCCCGGGCCCCTCAGTGGCTGTCAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: AVGGGTVVLGVP*APGPLSGCQFP
Trigger: AGGAAACTGACAGCCACTGAGGGGCCCGGGAGCCCAAGGGACGCCGAGGACCACAGTCCCTCCCCCAACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GCACCACGGCAATGGTCCCGTGCAGCTGGTTGGAGATaGGCTGGGGGCTCATGTCTGGGGCTCGCGACTCAG +
Preference number: 6 (lower is better)
Translates to: APRQWSRAAGWR*AGGSCLGLATQ
Trigger: CTGAGTCGCGAGCCCCAGACATGAGCCCCCAGCGCATCTCCAACCAGCTGCACGGGACCATTGCCGTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp CCTGCTGGCTTTTCTTCTCCCCGTAGGCCCACGCCCTaGTGGTCTTCCTCAGCCTCCTCGTGGCCTCCCGGT +
Preference number: 6 (lower is better)
Translates to: PAGFSSPRRPTP*WSSSASSWPPG
Trigger: ACCGGGAGGCCACGAGGAGGCTGAGGAAGACCACCAGGGCGTGGGCCTACGGGGAGAAGAAAAGCCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GGCACTCTGGTCCCCTTGGTGCCATTGCTGAGTGCCTaGGGACTGCGAGTCAGGGGTCCGGACTGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: GTLVPLVPLLSA*GLRVRGPDWVG
Trigger: ACCCACCCAGTCCGGACCCCTGACTCGCAGTCCCCAGGCACTCAGCAATGGCACCAAGGGGACCAGAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp TTTGTCCCCAGGCTCCGAGGCCCGCTTCCTCTTCCGTaGTGGACCCTGCCCGTGCTCCTGGGTGCAGATGCA +
Preference number: 6 (lower is better)
Translates to: FVPRLRGPLPLP*WTLPVLLGADA
Trigger: TGCATCTGCACCCAGGAGCACGGGCAGGGTCCACCACGGAAGAGGAAGCGGGCCTCGGAGCCTGGGGACAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp ATGGCTCCTGGCCCTGCCTCAACCTCTGTCGACCTCTaGGCGGAGTCCCCCACGCTCTTCACAGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: MAPGPASTSVDL*AESPTLFTGRE
Trigger: CTCTCTCCCTGTGAAGAGCGTGGGGGACTCCGCGCAGAGGTCGACAGAGGTTGAGGCAGGGCCAGGAGCCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp CGCTGCAGGTTCTGCAGGTGGGAGCTCTCGAACTCCTaGTGCCGCTTCCTGGCCAGCTCCTGGGTGACCATG +
Preference number: 6 (lower is better)
Translates to: RCRFCRWELSNS*CRFLASSWVTM
Trigger: CATGGTCACCCAGGAGCTGGCCAGGAAGCGGCAGCAGGAGTTCGAGAGCTCCCACCTGCAGAACCTGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp GGGCGTGAGGGGTCCATGGGAGTGGAAGCCTCCTCCTaGTCTGGCACTCTGGTCCCCTTGGTGCCATTGCTG +
Preference number: 6 (lower is better)
Translates to: GREGSMGVEASS*SGTLVPLVPLL
Trigger: CAGCAATGGCACCAAGGGGACCAGAGTGCCAGAGCAGGAGGAGGCTTCCACTCCCATGGACCCCTCACGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp CTGGTGGTCTTCCTCAGCCTCCTCGTGGCCTCCCGGTaGCTTCTCTGTGATGGCCTTCCAGCCACCAGGGGA +
Preference number: 6 (lower is better)
Translates to: LVVFLSLLVASR*LLCDGLPATRG
Trigger: TCCCCTGGTGGCTGGAAGGCCATCACAGAGAAGCCACCGGGAGGCCACGAGGAGGCTGAGGAAGACCACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp CAGCCTCTACTGCCCCTCTGTGTCCATCATGGCTCCTaGCCCTGCCTCAACCTCTGTCGACCTCTGCGCGGA +
Preference number: 6 (lower is better)
Translates to: QPLLPLCVHHGS*PCLNLCRPLRG
Trigger: TCCGCGCAGAGGTCGACAGAGGTTGAGGCAGGGCCAGGAGCCATGATGGACACAGAGGGGCAGTAGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CAA 72 bp GCTCGCGACTCAGGCAGGGTGGCCCCTGGGGAGATTTaGGCCACTGGAGATGTCCTGTGCCCTGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: ARDSGRVAPGEI*ATGDVLCPAGF
Trigger: AAAGCCAGCAGGGCACAGGACATCTCCAGTGGCCAAAATCTCCCCAGGGGCCACCCTGCCTGAGTCGCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp TCAGTGTCTTCTGCTGTTCCCGGAGCTGGTGGTTCTTaGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: SVSSAVPGAGGS*RRAPRSSGRPG
Trigger: GCCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp TTGGTGAGGATGAAGATGCGCTGCAGGTTCTGCAGGTaGGAGCTCTCGAACTCCTGCTGCCGCTTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LVRMKMRCRFCR*ELSNSCCRFLA
Trigger: GGCCAGGAAGCGGCAGCAGGAGTTCGAGAGCTCCCACCTGCAGAACCTGCAGCGCATCTTCATCCTCACCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp TCATCTTCTGTACTGCCTGGAGAGGACAGGCTGAGCTaGGACCCTGGAAGTGGGCGTGAGGGGTCCATGGGA +
Preference number: 6 (lower is better)
Translates to: SSSVLPGEDRLS*DPGSGREGSMG
Trigger: TCCCATGGACCCCTCACGCCCACTTCCAGGGTCCCAGCTCAGCCTGTCCTCTCCAGGCAGTACAGAAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp GCCTGGGGTGTCTGTCTCATCCAGTTCGTCGGACTCTaGTCTCAGCACTTCAGCCTTGCTGGGCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: AWGVCLIQFVGL*SQHFSLAGLWV
Trigger: CACCCAGAGCCCAGCAAGGCTGAAGTGCTGAGACCAGAGTCCGACGAACTGGATGAGACAGACACCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CAA 72 bp TTCAGTGTCTTCTGCTGTTCCCGGAGCTGGTGGTTCTaGGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: FSVFCCSRSWWF*EKSSSILWASR
Trigger: CCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CAA 90 bp AGGTTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTGGTGGTTCTaGGAGAAGAGCTCCTCGATCCTCTGGGCGTCCCGGCACCTCTCT +
Preference number: 6 (lower is better)
Translates to: RFSFSVFCCSRSWWF*EKSSSILWASRHLS
Trigger: AGAGAGGTGCCGGGACGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS GCA 72 bp TTCTCCAGCACCCGCAGGTTCTCCTTCAGTGTCTTCTaGTGTTCCCGGAGCTGGTGGTTCTTGGAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: FSSTRRFSFSVF*CSRSWWFLEKS
Trigger: GCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCTGCGGGTGCTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp TTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTGGTaGTTCTTGGAGAAGAGCTCCTCGATCCTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: FSFSVFCCSRSW*FLEKSSSILWA
Trigger: CGCCCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2
CDS CCA 72 bp AGGTTCTCCTTCAGTGTCTTCTGCTGTTCCCGGAGCTaGTGGTTCTTGGAGAAGAGCTCCTCGATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: RFSFSVFCCSRS*WFLEKSSSILW
Trigger: CCAGAGGATCGAGGAGCTCTTCTCCAAGAACCACCAGCTCCGGGAACAGCAGAAGACACTGAAGGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252998.2