Pregenerated sensors for RBBP8 (Homo sapiens)
Ensembl gene IDs: ENSG00000101773Ensembl transcript IDs: ENST00000327155.10, ENST00000360790.9, ENST00000399721.6, ENST00000399722.6, ENST00000399725.6, ENST00000577445.1, ENST00000577588.5, ENST00000579124.5, ENST00000580892.1, ENST00000581687.1, ENST00000581819.5, ENST00000582354.5, ENST00000583057.1, ENST00000583594.4, ENST00000583700.5, ENST00000585177.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTATCGGACATaGGGGTTCTCCTTTCTTCGTAGCCGGTTAACGCCAGAAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: TECSNLVCVCSMYRT*GFSFLRSRLTPENE Trigger: CTCATTTTCTGGCGTTAACCGGCTACGAAGAAAGGAGAACCCCCATGTCCGATACATAGAACAAACACATACTAAATTGGAGCACTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR GCA 90 bp | CATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTTTCAGCGCTGCTTGTTCCATGTaGTTTGGCCATTGGAGATTG | + |
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Preference number: 2 (lower is better) Translates to: HGTLSFRFFLNTKSKCFSAACSM*FGHWRL Trigger: CAATCTCCAATGGCCAAAGCACATGGAACAAGCAGC...GCTGAAACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR GCA 90 bp | ATCACCAAGGGGGCTCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGACATTCAAGCTCAGCTaGTTGATGCTGTTGATCATT | + |
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Preference number: 2 (lower is better) Translates to: ITKGAHGTLSFRFFLNTKTFKLS*LMLLII Trigger: AATGATCAACAGCATCAAGCAGCTGAGCTTGAATGT...CTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCCCTTGGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTATGTGCTTTGGCCATTaGAGATTGACTTTGGTCATA | + |
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Preference number: 2 (lower is better) Translates to: GAHGTLSFRFFLNTKSKCMCFGH*RLTLVI Trigger: TATGACCAAAGTCAATCTCCAATGGCCAAAGCACAT...ACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR TCA 90 bp | TCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTTTCAGGAAGGCTGTTATCGGTaGATCTGGAATAACGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SWDLEFQILLEHQVQVFQEGCYR*IWNNVF Trigger: GAAGACGTTATTCCAGATTCACCGATAACAGCCTTC...CTGAAACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR CCA 90 bp | GACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTTTCAGCAACAATTGTTCCATGTGCTTTaGCCATTGGAGATTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: DLEFQILLEHQVQVFQQQLFHVL*PLEIDF Trigger: AAAGTCAATCTCCAATGGCCAAAGCACATGGAACAA...TTGTTGCTGAAACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR-3UTR CAA 90 bp | ATCACCAAGGGGGCTCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGCAGGGGTATAGCTGCTaGTTCCATGTGCTTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ITKGAHGTLSFRFFLNTKQGYSC*FHVLWP Trigger: TGGCCAAAGCACATGGAACAAGCAGCTATACCCCTG...CTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCCCTTGGTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR CCA 72 bp | CCAGACAGTGGTAGAGCTCATCACCAAGGGGGCTCATaGGACCTTGAGTTTCAGATTCTTCTTGAACACCAA | + |
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Preference number: 3 (lower is better) Translates to: PDSGRAHHQGGS*DLEFQILLEHQ Trigger: TTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCCCTTGGTGATGAGCTCTACCACTGTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR GCA 90 bp | GTGATTTCCTTCCAGACAGTGGTAGAGCTCATCACCAAGGGGGCTCATGGGACCACAGGAGAAGAGACTTaGTTAAGATGGTCTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: VISFQTVVELITKGAHGTTGEET*LRWSQF Trigger: AAATTGAGACCATCTTAAGCAAGTCTCTTCTCCTGT...GGTCCCATGAGCCCCCTTGGTGATGAGCTCTACCACTGTCTGGAAGGAAATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | TGTGTTTGTTCTATGTATCGGACATGGGGGTTCTCCTTTCTTCGTAGCCGGTTACACCAAGGGGGCTCATaGGACCTTGAGTTTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: CVCSMYRTWGFSFLRSRLHQGGS*DLEFQI Trigger: AATCTGAAACTCAAGGTCCCATGAGCCCCCTTGGTG...TAACCGGCTACGAAGAAAGGAGAACCCCCATGTCCGATACATAGAACAAACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR TCA 90 bp | CGGTTAACGCCAGAAAATGAGAAGGCTGTTATCGGTGAATCTGGAATAACGTCTGAAGGCTGTTATCGGTaGATCTGGAATAACGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLTPENEKAVIGESGITSEGCYR*IWNNVF Trigger: GAAGACGTTATTCCAGATTCACCGATAACAGCCTTC...AGACGTTATTCCAGATTCACCGATAACAGCCTTCTCATTTTCTGGCGTTAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR GCA 90 bp | ACTTATCAGGGGTATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGATTGACACATTCAAGCTCAGCTaGTTGATGCTGTTGATCATT | + |
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Preference number: 4 (lower is better) Translates to: TYQGYSCLFHVLWPLEIDTFKLS*LMLLII Trigger: AATGATCAACAGCATCAAGCAGCTGAGCTTGAATGT...GTCAATCTCCAATGGCCAAAGCACATGGAACAAGCAGCTATACCCCTGATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | CGTAGCCGGTTAACGCCAGAAAATGAGAAGGCTGTTATCGGTGAATCTGGAATAATGTGCTTTGGCCATTaGAGATTGACTTTGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: RSRLTPENEKAVIGESGIMCFGH*RLTLVI Trigger: TATGACCAAAGTCAATCTCCAATGGCCAAAGCACAT...TATTCCAGATTCACCGATAACAGCCTTCTCATTTTCTGGCGTTAACCGGCTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | CGTAGCCGGTTAACGCCAGAAAATGAGAAGGCTGTTATCGGTGAATCTGGAATAGAGACTTGCTTAAGATaGTCTCAATTTTCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSRLTPENEKAVIGESGIETCLR*SQFSAG Trigger: TCCAGCAGAAAATTGAGACCATCTTAAGCAAGTCTC...TATTCCAGATTCACCGATAACAGCCTTCTCATTTTCTGGCGTTAACCGGCTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR GCA 90 bp | TTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTATCGGACAGCTGCTTGTTCCATGTaGTTTGGCCATTGGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: FAHTECSNLVCVCSMYRTAACSM*FGHWRL Trigger: CAATCTCCAATGGCCAAAGCACATGGAACAAGCAGC...TGTCCGATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| 3UTR CAA 72 bp | ATTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTaGTTCTATGTATCGGACATGGGGGTTCTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ICTHRVLQFSMC*FYVSDMGVLLS Trigger: AGAAAGGAGAACCCCCATGTCCGATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | TTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTATCGGACATCTATGTATCGGACATaGGGGTTCTCCTTTCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: FAHTECSNLVCVCSMYRTSMYRT*GFSFLR Trigger: ACGAAGAAAGGAGAACCCCCATGTCCGATACATAGA...TGTCCGATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | TATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGATTGACTTTGGTCATAAGTTGTTCCATGTGCTTTaGCCATTGGAGATTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: YSCLFHVLWPLEIDFGHKLFHVL*PLEIDF Trigger: AAAGTCAATCTCCAATGGCCAAAGCACATGGAACAA...CTTATGACCAAAGTCAATCTCCAATGGCCAAAGCACATGGAACAAGCAGCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CCA 90 bp | GGCTCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTTTGTCTCAATTTTCTGCTaGAGTTGTTCAGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GSWDLEFQILLEHQVQVFVSIFC*SCSESF Trigger: AAAGCTTTCTGAACAACTCCAGCAGAAAATTGAGAC...AAACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR GCA 90 bp | CTCATTTCATTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTATCAGGGGTATAGCTaGTTGTTCCATGTGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LISFAHTECSNLVCVCSMYQGYS*LFHVLW Trigger: CCAAAGCACATGGAACAAGCAGCTATACCCCTGATA...CATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAATGAAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR TCA 90 bp | TTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTATCGGACAGGATTATGTTGTGGATaGGTTGAAGACTTGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: FAHTECSNLVCVCSMYRTGLCCG*VEDLET Trigger: AGTTTCCAAGTCTTCAACTCATCCACAACATAATCC...TGTCCGATACATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR GCA 90 bp | CTCATTTCATTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGATGGTCTCAATTTTCTaGTGGAGTTGTTCAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LISFAHTECSNLVCVCSMMVSIF*WSCSES Trigger: GCTTTCTGAACAACTCCAGCAGAAAATTGAGACCAT...CATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAATGAAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | TGCCTCGGGATTCGCGAAAGCCCCCGAAGGGAAGCGAGCACTTTCTaGGGCTGTGAAAGGACGGCTGCTCGCTTTTCTCTTTCGCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CLGIRESPRREASTF*GCERTAARFSLSPF Trigger: AAAGGGCGAAAGAGAAAAGCGAGCAGCCGTCCTTTCACAGCCTCAGAAAGTGCTCGCTTCCCTTCGGGGGCTTTCGCGAATCCCGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS TCA 90 bp | GTCTGGAGAGCATTTATTCAAGGGCTGAAGGATGATGCATTCCTGTaGACAGGGCTCCCCTGGGGAATCTTTGGGCAACGTGCAGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: VWRAFIQGLKDDAFL*TGLPWGIFGQRAVA Trigger: GGCAACTGCACGTTGCCCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATCATCCTTCAGCCCTTGAATAAATGCTCTCCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS-3UTR CAA 90 bp | GTGATTTCCTTCCAGACAGTGGTAGAGCTCATCACCAAGGGGGCTCATGGGACCGGGGCTCATGGGACCTaGAGTTTCAGATTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VISFQTVVELITKGAHGTGAHGT*SFRFFL Trigger: CAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCC...GGTCCCATGAGCCCCCTTGGTGATGAGCTCTACCACTGTCTGGAAGGAAATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS GCA 90 bp | CTTAGTATAAACCACTACACTGCAGGTGCTCACCAAAATACTCGCTaGCACACCACAGGTATTCTCACACGGGTAAGGCGAGAGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: LSINHYTAGAHQNTR*HTTGILTRVRREAH Trigger: ATGTGCCTCTCGCCTTACCCGTGTGAGAATACCTGTGGTGTGGCAGCGAGTATTTTGGTGAGCACCTGCAGTGTAGTGGTTTATACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000399721.6 ENST00000399725.6 ENST00000583594.4 |
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| CDS-3UTR CAA 90 bp | ACTTATCAGGGGTATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGATTGACCAGGGGTATAGCTGCTaGTTCCATGTGCTTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: TYQGYSCLFHVLWPLEIDQGYSC*FHVLWP Trigger: TGGCCAAAGCACATGGAACAAGCAGCTATACCCCTG...GTCAATCTCCAATGGCCAAAGCACATGGAACAAGCAGCTATACCCCTGATAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | ATGATGGTTTATTGTCTGGAGAGCATTTATTCAAGGGCTGAAGGATaGTGCATTCCTGTGAACAGGGCTCCCCTGGGGAATCTTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: MMVYCLESIYSRAEG*CIPVNRAPLGNLWA Trigger: TGCCCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATCATCCTTCAGCCCTTGAATAAATGCTCTCCAGACAATAAACCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CCA 90 bp | GTATCAAGTCGTCTTTGGACAGGTCAAATACCTTTGTGTCCACCCTaGTTCAAGCTACCATCAACCTCTTCTACGGCAATATCCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: VSSRLWTGQIPLCPP*FKLPSTSSTAISSP Trigger: AGGGGAGGATATTGCCGTAGAAGAGGTTGATGGTAGCTTGAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577588.5 |
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| CDS CCA 90 bp | GTATCAAGTCGTCTTTGGACAGGTCAAATACCTTTGTGTCCACCCTaGTTCAAGCTACCATCAACCTCTTCTACGGCAATATCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSSRLWTGQIPLCPP*FKLPSTSSTAISSW Trigger: CCAGGAGGATATTGCCGTAGAAGAGGTTGATGGTAGCTTGAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582354.5 ENST00000583700.5 |
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| CDS GCA 90 bp | GGTCAAATACCCGCATGCCCGGCACTTTTTGTTAGCATCTCTCTCTaGAATGAACCGTTATTCGAGGCACGACGACAATGTACATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: GQIPACPALFVSISL*NEPLFEARRQCTFF Trigger: GAAAAATGTACATTGTCGTCGTGCCTCGAATAACGGTTCATTGCAGAGAGAGATGCTAACAAAAAGTGCCGGGCATGCGGGTATTTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS CCA 90 bp | GTATCAAGTCGTCTTTGGACAGGTCAAATACCTTTGTGTCCACCCTaGTTCAAGCTACCATCAACCTCTTCTACGGCAATATCCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: VSSRLWTGQIPLCPP*FKLPSTSSTAISSL Trigger: AAGGGAGGATATTGCCGTAGAAGAGGTTGATGGTAGCTTGAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581819.5 |
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| CDS-3UTR CAA 90 bp | GGGGCTCATGGGACCTTGAGTTTCAGATTCTTCTTGAACACCAAGTCCAAGTGTCATTGGAGATTGACTTaGGTCATAAGTGTCAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: GAHGTLSFRFFLNTKSKCHWRLT*VISVSY Trigger: GTAGCTGACACTTATGACCAAAGTCAATCTCCAATG...ACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACTCAAGGTCCCATGAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS-3UTR CAA 90 bp | CTTATCAGGGGTATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGATTGACTCATGTGCTTTGGCCATaGGAGATTGACTTTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LIRGIAACSMCFGHWRLTHVLWP*EIDFGH Trigger: ATGACCAAAGTCAATCTCCAATGGCCAAAGCACATG...AGTCAATCTCCAATGGCCAAAGCACATGGAACAAGCAGCTATACCCCTGATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | ATTTGTAATGATGGTTTATTGTCTGGAGAGCATTTATTCAAGGGCTaGAGGATGATGCATTCCTGTGAACAGGGCTCCCCTGGGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: ICNDGLLSGEHLFKG*RMMHSCEQGSPGES Trigger: AGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATCATCCTTCAGCCCTTGAATAAATGCTCTCCAGACAATAAACCATCATTACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS-3UTR CAA 90 bp | ACTTATCAGGGGTATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGATTGACTTTGGCCATTGGAGATaGACTTTGGTCATAAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: TYQGYSCLFHVLWPLEIDFGHWR*TLVISV Trigger: GACACTTATGACCAAAGTCAATCTCCAATGGCCAAA...GTCAATCTCCAATGGCCAAAGCACATGGAACAAGCAGCTATACCCCTGATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | CTGGATTACCAGAAATTCATGCAGAACTGCCTAGAAGTAGGACTATaGAGCATCCAAGGGTTTTCCCTGGTATCTGCTGCAGAATTCATT | + |
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Preference number: 5 (lower is better) Translates to: LDYQKFMQNCLEVGL*SIQGFSLVSAAEFI Trigger: AATGAATTCTGCAGCAGATACCAGGGAAAACCCTTGGATGCTTCATAGTCCTACTTCTAGGCAGTTCTGCATGAATTTCTGGTAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583700.5 |
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| CDS-3UTR CAA 90 bp | AAGATGACTTATCAGGGGTATAGCTGCTTGTTCCATGTGCTTTGGCCATTGGAGAGTTTCAGATTCTTCTaGAACACCAAGTCCAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: KMTYQGYSCLFHVLWPLESFRFF*NTKSKC Trigger: ACACTTGGACTTGGTGTTCAAGAAGAATCTGAAACT...CTCCAATGGCCAAAGCACATGGAACAAGCAGCTATACCCCTGATAAGTCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | TTTAGAAGTCTCACTTCCTTGGCTTTTCTCTTGACGCTGAATAGCTaGAAATCGATCAGACAGATCCAGAGGTTTATCCATCACACAGTC | + |
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Preference number: 5 (lower is better) Translates to: FRSLTSLAFLLTLNS*KSIRQIQRFIHHTV Trigger: GACTGTGTGATGGATAAACCTCTGGATCTGTCTGATCGATTTTCAGCTATTCAGCGTCAAGAGAAAAGCCAAGGAAGTGAGACTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS TCA 90 bp | TCCACACATTTGGCTGCAGAAGTCTTCTGTGTTAATTCTTTAACTTaGATCCAGAGGAGGTTTAAGGTGTTATCAGCTCTTCCTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: STHLAAEVFCVNSLT*IQRRFKVLSALPQG Trigger: TCCCTGAGGAAGAGCTGATAACACCTTAAACCTCCTCTGGATTCAAGTTAAAGAATTAACACAGAAGACTTCTGCAGCCAAATGTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583700.5 |
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| CDS GCA 90 bp | GTACATTTTTCAATCTCTCAGAACGTCACGTCTTACCTCCCAAGTTaGATTCTGGGCTCAAAGGCCTGTAATTTGTGTGTATTCCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: VHFSISQNVTSYLPS*ILGSKACNLCVFLS Trigger: ACTAAGGAATACACACAAATTACAGGCCTTTGAGCCCAGAATGCAACTTGGGAGGTAAGACGTGACGTTCTGAGAGATTGAAAAATGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS TCA 90 bp | GGCAATATCCTCCCTTCGACTTATTTAGAAAACCTCTGCTCTTGGTaGAAAGCAGAAATTGTTTCACTGCTCACTTTCCCTGAATCTATC | + |
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Preference number: 5 (lower is better) Translates to: GNILPSTYLENLCSW*KAEIVSLLTFPESI Trigger: GATAGATTCAGGGAAAGTGAGCAGTGAAACAATTTCTGCTTTTCACCAAGAGCAGAGGTTTTCTAAATAAGTCGAAGGGAGGATATTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581819.5 |
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| CDS CCA 90 bp | TTTTCTGACCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCTTTGTGTCCACCCTGGTTCAAGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: FSDLFCYIIEVSSRL*TGQIPLCPPWFKLP Trigger: TGGTAGCTTGAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGGTCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577588.5 ENST00000581819.5 ENST00000582354.5 ENST00000583700.5 |
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| CDS CCA 90 bp | TTAACTGAAGAACTGATGCAAGTTCACATCCTCCATGGTCTGACCTaGTTTGTATTTTTATTGGCTCATGAGAACCAGCACTCTTTATGT | + |
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Preference number: 5 (lower is better) Translates to: LTEELMQVHILHGLT*FVFLLAHENQHSLC Trigger: ACATAAAGAGTGCTGGTTCTCATGAGCCAATAAAAATACAAACCAGGTCAGACCATGGAGGATGTGAACTTGCATCAGTTCTTCAGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000583057.1 |
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| CDS-3UTR CAA 90 bp | CTCATTTCATTTGCACACACAGAGTGCTCCAATTTAGTATGTGTTTGTTCTATGTTCAAGCTCAGCTGCTaGATGCTGTTGATCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: LISFAHTECSNLVCVCSMFKLSC*MLLIIL Trigger: GAGAATGATCAACAGCATCAAGCAGCTGAGCTTGAA...CATAGAACAAACACATACTAAATTGGAGCACTCTGTGTGTGCAAATGAAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS TCA 90 bp | TTTCATGAAGGACTTTCTGCTGTTCCCTCAGCTGTTGATTTTTGGTaGAGAATTCTTCTAGTCTTTGTGCATCTAAGATTCGTTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FHEGLSAVPSAVDFW*RILLVFVHLRFVPV Trigger: AACAGGAACGAATCTTAGATGCACAAAGACTAGAAGAATTCTTCACCAAAAATCAACAGCTGAGGGAACAGCAGAAAGTCCTTCATGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000580892.1 ENST00000581819.5 ENST00000582354.5 |
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| CDS TCA 90 bp | GTAGCTCCAAATACAGGAGATGACACTCGAGTAGGTAATTCTTCTTaGGGAGGAGTCTTTGAAGTAGAATCTGAAAATCTTAAACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VAPNTGDDTRVGNSS*GGVFEVESENLKLS Trigger: AGATAGTTTAAGATTTTCAGATTCTACTTCAAAGACTCCTCCTCAAGAAGAATTACCTACTCGAGTGTCATCTCCTGTATTTGGAGCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS GCA 90 bp | CTTCCCGAGATGTTCATCTTGCTTAATATGCTCCACACTTCTACTTaGTTAATATTTTCTGACCTTTTCTGTTACATTATAGAGGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPEMFILLNMLHTST*LIFSDLFCYIIEVS Trigger: TGATACCTCTATAATGTAACAGAAAAGGTCAGAAAATATTAAGCAAGTAGAAGTGTGGAGCATATTAAGCAAGATGAACATCTCGGGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577588.5 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 ENST00000583594.4 ENST00000583700.5 |
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| CDS CCA 72 bp | TCGCCCTTTTCCCTCACCAGAGTGCCAAATCCTCGGTaGGAAAGCCGACCCCTCCGGACAGCCCGCGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SPFSLTRVPNPR*ESRPLRTARAL Trigger: TAAAGCGCGGGCTGTCCGGAGGGGTCGGCTTTCCCACCGAGGATTTGGCACTCTGGTGAGGGAAAAGGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS CCA 72 bp | TGCATTCCTGTGAACAGGGCTCCCCTGGGGAATCTTTaGGCAACGTGCAGTTGCCATCTGAGGCCTTACGGC | + |
|
Preference number: 6 (lower is better) Translates to: CIPVNRAPLGNL*ATCSCHLRPYG Trigger: GCCGTAAGGCCTCAGATGGCAACTGCACGTTGCCCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CCA 72 bp | GAACAAACTGCACGGGACATTTCAGGGGTCCTCTTATaGGCGGAGCAGAGCAGCGGGGCAAAGGCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EQTARDISGVLL*AEQSSGAKAFQ Trigger: CTGGAAAGCCTTTGCCCCGCTGCTCTGCTCCGCCCATAAGAGGACCCCTGAAATGTCCCGTGCAGTTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000583594.4 |
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| CDS TCA 72 bp | AAGCCCCCGAAGGGAAGCGAGCACTTTCTGAGGCTGTaGAAGGACGGCTGCTCGCTTTTCTCTTTCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KPPKGSEHFLRL*KDGCSLFSFAL Trigger: AAGGGCGAAAGAGAAAAGCGAGCAGCCGTCCTTTCACAGCCTCAGAAAGTGCTCGCTTCCCTTCGGGGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS GCA 72 bp | GTGAACAGGGCTCCCCTGGGGAATCTTTGGGCAACGTaGAGTTGCCATCTGAGGCCTTACGGCTTGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNRAPLGNLWAT*SCHLRPYGLRK Trigger: TTTCCTCAAGCCGTAAGGCCTCAGATGGCAACTGCACGTTGCCCAAAGATTCCCCAGGGGAGCCCTGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CAA 72 bp | ATGCATTCCTGTGAACAGGGCTCCCCTGGGGAATCTTaGGGCAACGTGCAGTTGCCATCTGAGGCCTTACGG | + |
|
Preference number: 6 (lower is better) Translates to: MHSCEQGSPGES*GNVQLPSEALR Trigger: CCGTAAGGCCTCAGATGGCAACTGCACGTTGCCCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS TCA 72 bp | ATTCGCGAAAGCCCCCGAAGGGAAGCGAGCACTTTCTaGGGCTGTGAAAGGACGGCTGCTCGCTTTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IRESPRREASTF*GCERTAARFSL Trigger: AAGAGAAAAGCGAGCAGCCGTCCTTTCACAGCCTCAGAAAGTGCTCGCTTCCCTTCGGGGGCTTTCGCGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS GCA 72 bp | AACCACTACACTGCAGGTGCTCACCAAAATACTCGCTaGCACACCACAGGTATTCTCACACGGGTAAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: NHYTAGAHQNTR*HTTGILTRVRR Trigger: TCGCCTTACCCGTGTGAGAATACCTGTGGTGTGGCAGCGAGTATTTTGGTGAGCACCTGCAGTGTAGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000399721.6 ENST00000399725.6 ENST00000583594.4 |
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| CDS CAA 72 bp | TGGGCAACGTGCAGTTGCCATCTGAGGCCTTACGGCTaGAGGAAAAGCCCTTTGGAATGGTCTTCAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WATCSCHLRPYG*RKSPLEWSSKP Trigger: AGGCTTTGAAGACCATTCCAAAGGGCTTTTCCTCAAGCCGTAAGGCCTCAGATGGCAACTGCACGTTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CAA 90 bp | GTTATCAGCTCTTCCTCAGGGAAGCTTCCACGCAGGAGGCTTTCTTaGGAGCTCTGTTCCCTAGGTAGCTCCAGGATCTTTGGACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VISSSSGKLPRRRLS*ELCSLGSSRIFGLF Trigger: GAAAAGTCCAAAGATCCTGGAGCTACCTAGGGAACAGAGCTCCAAAGAAAGCCTCCTGCGTGGAAGCTTCCCTGAGGAAGAGCTGATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583700.5 |
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| CDS TCA 72 bp | GCATTTATTCAAGGGCTGAAGGATGATGCATTCCTGTaGACAGGGCTCCCCTGGGGAATCTTTGGGCAACGT | + |
|
Preference number: 6 (lower is better) Translates to: AFIQGLKDDAFL*TGLPWGIFGQR Trigger: ACGTTGCCCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATCATCCTTCAGCCCTTGAATAAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS GCA 72 bp | CCCGCATGCCCGGCACTTTTTGTTAGCATCTCTCTCTaGAATGAACCGTTATTCGAGGCACGACGACAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PACPALFVSISL*NEPLFEARRQC Trigger: ACATTGTCGTCGTGCCTCGAATAACGGTTCATTGCAGAGAGAGATGCTAACAAAAAGTGCCGGGCATGCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS CAA 90 bp | GGGAATCTTTGGGCAACGTGCAGTTGCCATCTGAGGCCTTACGGCTaGAGGAAAAGCCCTTTGGAATGGTCTTCAAAGCCTCATAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GNLWATCSCHLRPYG*RKSPLEWSSKPHKE Trigger: CTCTTTATGAGGCTTTGAAGACCATTCCAAAGGGCTTTTCCTCAAGCCGTAAGGCCTCAGATGGCAACTGCACGTTGCCCAAAGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CCA 72 bp | GTGGCAGTAGACAATTCCTCCTCTTCATCTGCTGCTTaGGAGAAACTGTCTGCCAAACAGGATTCATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAVDNSSSSSAA*EKLSAKQDSYS Trigger: AGAGTATGAATCCTGTTTGGCAGACAGTTTCTCCCAAGCAGCAGATGAAGAGGAGGAATTGTCTACTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000583057.1 |
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| CDS CCA 72 bp | CGTCTTTGGACAGGTCAAATACCTTTGTGTCCACCCTaGTTCAAGCTACCATCAACCTCTTCTACGGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: RLWTGQIPLCPP*FKLPSTSSTAI Trigger: TATTGCCGTAGAAGAGGTTGATGGTAGCTTGAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577588.5 ENST00000581819.5 ENST00000582354.5 ENST00000583700.5 |
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| CDS CAA 72 bp | TGCCATCTGAGGCCTTACGGCTTGAGGAAAAGCCCTTaGGAATGGTCTTCAAAGCCTCATAAAGAGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CHLRPYGLRKSP*EWSSKPHKESL Trigger: AAGTGACTCTTTATGAGGCTTTGAAGACCATTCCAAAGGGCTTTTCCTCAAGCCGTAAGGCCTCAGATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CAA 72 bp | TTTGGACAGGTCAAATACCCGCATGCCCGGCACTTTTaGTTAGCATCTCTCTCTGCAATGAACCGTTATTCG | + |
|
Preference number: 6 (lower is better) Translates to: FGQVKYPHARHF*LASLSAMNRYS Trigger: CGAATAACGGTTCATTGCAGAGAGAGATGCTAACAAAAAGTGCCGGGCATGCGGGTATTTGACCTGTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS CAA 72 bp | AAATCAGTGAACACCACCTCTCTGGACCACACTGGTTaGCTAGACACTACTGCTATGTGGAAGAGTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KSVNTTSLDHTG*LDTTAMWKSSA Trigger: AGCAGAACTCTTCCACATAGCAGTAGTGTCTAGCAAACCAGTGTGGTCCAGAGAGGTGGTGTTCACTGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577588.5 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 |
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| CDS CAA 90 bp | ACGTCTTACCTCCCAAGTTGCATTCTGGGCTCAAAGGCCTGTAATTaGTGTGTATTCCTTAGTATAAACCACTACACTGCAGGTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSYLPSCILGSKACN*CVFLSINHYTAGAH Trigger: GTGAGCACCTGCAGTGTAGTGGTTTATACTAAGGAATACACACAAATTACAGGCCTTTGAGCCCAGAATGCAACTTGGGAGGTAAGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS GCA 72 bp | TTTTGTCCAAAGGTCCTTAAAGTCACTAGATGTATCTaGAGAGTTAGGGCTTCCACAGCTGCTTCCCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FCPKVLKVTRCI*RVRASTAASRD Trigger: ATCTCGGGAAGCAGCTGTGGAAGCCCTAACTCTGCAGATACATCTAGTGACTTTAAGGACCTTTGGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577588.5 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 ENST00000583594.4 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCGCCTCCGAGATTGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPPPRLPR Trigger: CCGAGGCAATCTCGGAGGCGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS CCA 72 bp | CTGGACCACACTGGTTTGCTAGACACTACTGCTATGTaGAAGAGTTCTGCTGCATCTAAGCTATATACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LDHTGLLDTTAM*KSSAASKLYTE Trigger: CTCAGTATATAGCTTAGATGCAGCAGAACTCTTCCACATAGCAGTAGTGTCTAGCAAACCAGTGTGGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577588.5 ENST00000579124.5 ENST00000582354.5 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCGCCTCCGAGATTGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTASEIAS Trigger: CGAGGCAATCTCGGAGGCGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327155.10 |
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| CDS CAA 90 bp | GTCAAATACCTCCCAAGTTGCATTCTGGGCTCAAAGGCCTGTAATTaGTGTGTATTCCTTAGTATAAACCACTACACTGCAGGTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VKYLPSCILGSKACN*CVFLSINHYTAGAH Trigger: GTGAGCACCTGCAGTGTAGTGGTTTATACTAAGGAATACACACAAATTACAGGCCTTTGAGCCCAGAATGCAACTTGGGAGGTATTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399725.6 ENST00000583594.4 |
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| CDS CCA 72 bp | GAACTGATGCAAGTTCACATCCTCCATGGTCTGACCTaGTTTGTATTTTTATTGGCTCATGAGAACCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ELMQVHILHGLT*FVFLLAHENQH Trigger: GTGCTGGTTCTCATGAGCCAATAAAAATACAAACCAGGTCAGACCATGGAGGATGTGAACTTGCATCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000583057.1 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCCGCATGCCCGGCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTRMPGTF Trigger: AAAAGTGCCGGGCATGCGGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS CAA 90 bp | TCTGCAGAGTTAGGGCTTCCACAGCTGCTTCCCGAGATGTTCATCTaGCTTAATATGCTCCACACTTCTACTTGCTTAATATTTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SAELGLPQLLPEMFI*LNMLHTSTCLIFSD Trigger: GTCAGAAAATATTAAGCAAGTAGAAGTGTGGAGCATATTAAGCAAGATGAACATCTCGGGAAGCAGCTGTGGAAGCCCTAACTCTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577588.5 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 ENST00000583594.4 |
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| CDS CAA 90 bp | CCTTCTGTTTCTGTTTCAACGTCTATGTCTTCTGCTCCTTGCCTTTaGGAGAAAATATTGCGTTGTAAGGCTGACGTCTTTTTGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVSVSTSMSSAPCL*EKILRCKADVFLDE Trigger: CTCGTCCAAAAAGACGTCAGCCTTACAACGCAATATTTTCTCCAAAAGGCAAGGAGCAGAAGACATAGACGTTGAAACAGAAACAGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000581687.1 ENST00000583057.1 |
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| CDS CAA 90 bp | TTAAACATTAAATCAGTGAACACCACCTCTCTGGACCACACTGGTTaGCTAGACACTACTGCTATGTGGAAGAGTTCTGCTGCATCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNIKSVNTTSLDHTG*LDTTAMWKSSAASK Trigger: CTTAGATGCAGCAGAACTCTTCCACATAGCAGTAGTGTCTAGCAAACCAGTGTGGTCCAGAGAGGTGGTGTTCACTGATTTAATGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000577588.5 ENST00000579124.5 ENST00000582354.5 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCCGCATGCCCGGCACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPACPALF Trigger: AAAAAGTGCCGGGCATGCGGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399721.6 |
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| CDS CAA 72 bp | TTAGGGCTTCCACAGCTGCTTCCCGAGATGTTCATCTaGCTTAATATGCTCCACACTTCTACTTGCTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: LGLPQLLPEMFI*LNMLHTSTCLI Trigger: TATTAAGCAAGTAGAAGTGTGGAGCATATTAAGCAAGATGAACATCTCGGGAAGCAGCTGTGGAAGCCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577588.5 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 ENST00000583594.4 |
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| CDS CAA 72 bp | TGGAATAACGTCTTCCTCACATTCAAGCTCAGCTGCTaGATGCTGTTGATCATTCTCAATTTTCTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WNNVFLTFKLSC*MLLIILNFLLE Trigger: CTCCAGCAGAAAATTGAGAATGATCAACAGCATCAAGCAGCTGAGCTTGAATGTGAGGAAGACGTTATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577445.1 ENST00000582354.5 |
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| CDS TCA 72 bp | CAGAAATTCATGCAGAACTGCCTAGAAGTAGGACTATaGAGCATCCAAGGGTTTTCCCCTTCGACTTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: QKFMQNCLEVGL*SIQGFSPSTYL Trigger: TAAATAAGTCGAAGGGGAAAACCCTTGGATGCTTCATAGTCCTACTTCTAGGCAGTTCTGCATGAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000577588.5 ENST00000579124.5 ENST00000582354.5 |
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| CDS GCA 72 bp | ATCTGGAATAACGTCTTCCTCACATTCAAGCTCAGCTaGTTGATGCTGTTGATCATTCTCAATTTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IWNNVFLTFKLS*LMLLIILNFLL Trigger: CAGCAGAAAATTGAGAATGATCAACAGCATCAAGCAGCTGAGCTTGAATGTGAGGAAGACGTTATTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000577445.1 ENST00000582354.5 |
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| CDS GCA 72 bp | TCAAAAGAGTCGTCAAGTAGCACAGGAGAAGAGACTTaGTTAAGATGGTCTCAATTTTCTGCTGGAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SKESSSSTGEET*LRWSQFSAGVV Trigger: AACAACTCCAGCAGAAAATTGAGACCATCTTAAGCAAGTCTCTTCTCCTGTGCTACTTGACGACTCTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585177.1 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCTCCCAAGTTGCATTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPPKLHSG Trigger: CCCAGAATGCAACTTGGGAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399725.6 ENST00000583594.4 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCTTTGTGTCCACCCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPLCPPWF Trigger: GAACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577588.5 ENST00000581819.5 ENST00000582354.5 ENST00000583700.5 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCTCCCAAGTTGCATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTSQVAFW Trigger: CCAGAATGCAACTTGGGAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399725.6 ENST00000583594.4 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCTTTGTGTCCACCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTFVSTLV Trigger: AACCAGGGTGGACACAAAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577588.5 ENST00000581819.5 ENST00000582354.5 ENST00000583700.5 |
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| CDS CCA 72 bp | GATCCAGAGGTTTATCCATCACACAGTCTCCATTCATaGAAAACTGATTATCCATTGGAAAAGGGAAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DPEVYPSHSLHS*KTDYPLEKGKH Trigger: ATGCTTTCCCTTTTCCAATGGATAATCAGTTTTCCATGAATGGAGACTGTGTGATGGATAAACCTCTGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCAAAATACTCGCTGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPKYSLPH Trigger: GTGTGGCAGCGAGTATTTTGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399722.6 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCAAAATACTCGCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTKILAAT Trigger: TGTGGCAGCGAGTATTTTGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399722.6 |
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| CDS TCA 72 bp | CCATGGTCTGACCTGGTTTGTATTTTTATTGGCTCATaGGAACCAGCACTCTTTATGTCATCTAAAACATTC | + |
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Preference number: 6 (lower is better) Translates to: PWSDLVCIFIGS*EPALFMSSKTF Trigger: GAATGTTTTAGATGACATAAAGAGTGCTGGTTCTCATGAGCCAATAAAAATACAAACCAGGTCAGACCATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000583057.1 |
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| CDS TCA 72 bp | TTGGCTGCAGAAGTCTTCTGTGTTAATTCTTTAACTTaGATCCAGAGGAGGTTTAAGGTGTTATCAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LAAEVFCVNSLT*IQRRFKVLSAL Trigger: AAGAGCTGATAACACCTTAAACCTCCTCTGGATTCAAGTTAAAGAATTAACACAGAAGACTTCTGCAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583700.5 |
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| CDS CCA 72 bp | TGGAGAAAATATTGCGTTGTAAGGCTGACGTCTTTTTaGACGAGGACAAGGATCAAGATCTTCCTTAATATA | + |
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Preference number: 6 (lower is better) Translates to: WRKYCVVRLTSF*TRTRIKIFLNI Trigger: TATATTAAGGAAGATCTTGATCCTTGTCCTCGTCCAAAAAGACGTCAGCCTTACAACGCAATATTTTCTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000581687.1 ENST00000583057.1 |
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| CDS CAA 72 bp | TATCCTCCCTTCGACTTATTTAGAAAACCTCTGCTCTaGGTGAAAAGCAGAAATTGTTTCACTGCTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: YPPFDLFRKPLL*VKSRNCFTAHF Trigger: AAAGTGAGCAGTGAAACAATTTCTGCTTTTCACCAAGAGCAGAGGTTTTCTAAATAAGTCGAAGGGAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581819.5 |
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| CDS CAA 90 bp | TGTAAAAGAGAAGGGGACAAACTTGTATTCAAATCTAAACCACTTTaGATACTAGAGGTAGCTCCAAATACAGGAGATGACACTCGAGTA | + |
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Preference number: 6 (lower is better) Translates to: CKREGDKLVFKSKPL*ILEVAPNTGDDTRV Trigger: TACTCGAGTGTCATCTCCTGTATTTGGAGCTACCTCTAGTATCAAAAGTGGTTTAGATTTGAATACAAGTTTGTCCCCTTCTCTTTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS TCA 72 bp | AATACAGGAGATGACACTCGAGTAGGTAATTCTTCTTaGGGAGGAGTCTTTGAAGTAGAATCTGAAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: NTGDDTRVGNSS*GGVFEVESENL Trigger: AAGATTTTCAGATTCTACTTCAAAGACTCCTCCTCAAGAAGAATTACCTACTCGAGTGTCATCTCCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 |
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| CDS GCA 72 bp | ATTATGGAGGAAATCACTTCTTACTCAAGACCTAAGTaGCAGACTCACCGATCTTCTAAAACTTTAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: IMEEITSYSRPK*QTHRSSKTLMV Trigger: AACCATTAAAGTTTTAGAAGATCGGTGAGTCTGGCACTTAGGTCTTGAGTAAGAAGTGATTTCCTCCATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580892.1 |
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| CDS CAA 72 bp | CCTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTaGGACAGGTCAAATACCTGGATTACCAGAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: PFLLHYRGIKSS*DRSNTWITRNS Trigger: TGAATTTCTGGTAATCCAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579124.5 |
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| CDS GCA 72 bp | TATTACAGTAACATCCATTTTATACTGAGAAAGGTCTaGTCCCGGATCTATACTCCACTGGATATTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: YYSNIHFILRKV*SRIYTPLDIFK Trigger: TTTGAAAATATCCAGTGGAGTATAGATCCGGGAGCAGACCTTTCTCAGTATAAAATGGATGTTACTGTAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399722.6 ENST00000399725.6 ENST00000583057.1 |
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| CDS CCA 72 bp | CTTTTCTGTTACATTATAGAGGTATCAAGTCGTCTTTaGACAGGTCAAATACCTGGATTACCAGAAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: LFCYIIEVSSRL*TGQIPGLPEIH Trigger: ATGAATTTCTGGTAATCCAGGTATTTGACCTGTCCAAAGACGACTTGATACCTCTATAATGTAACAGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579124.5 |
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| CDS CAA 72 bp | AGTCTTTGTGCATCTAAGATTCGTTCCTGTTTTAGCTaGGTTACTTTTACTTGTAAACCTTGTACTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SLCASKIRSCFS*VTFTCKPCTSL Trigger: TAGAGAAGTACAAGGTTTACAAGTAAAAGTAACCAAGCTAAAACAGGAACGAATCTTAGATGCACAAAGACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000327155.10 ENST00000360790.9 ENST00000399721.6 ENST00000399722.6 ENST00000399725.6 ENST00000579124.5 ENST00000581819.5 ENST00000582354.5 |
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