RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBBP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000122257

Ensembl transcript IDs: ENST00000319715.10, ENST00000348022.6, ENST00000381039.7, ENST00000452655.6, ENST00000562430.5, ENST00000562683.2, ENST00000564314.5, ENST00000564726.5, ENST00000567686.5, ENST00000568015.5, ENST00000568316.1, ENST00000570185.1, ENST00000613729.1, ENST00000646282.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACAAACCCCTGGCGCCTaGTCCCCGGAGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQQTPGA*SPEATS
Trigger: GCTCGTGGCCTCCGGGGAGCAGGCGCCAGGGGTTTG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACCGCACACAAACCCCTaGCGCCTGCTCCCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQPHTNP*RLLPGG
Trigger: GCCTCCGGGGAGCAGGCGCCAGGGGTTTGTGTGCGG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTATGGCGGACGCGGCCTaGCTTCGGACGAGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVMADAA*LRTSAP
Trigger: TGGGGCGCTCGTCCGAAGCCAGGCCGCGTCCGCCAT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACCTCACGCCTCCTCCTaGCTTCCGGACGACCGGCGT +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQPHASS*LPDDRR
Trigger: ACGCCGGTCGTCCGGAAGCCAGGAGGAGGCGTGAGG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTCCGTGGATTGGGGTaGCCCAGGCCCCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLRGLG*PRPREK
Trigger: CTTCTCCCGGGGCCTGGGTCACCCCAATCCACGGAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGGCTGCTGTGGCTCTaGTTCCTGCTTATGCCCACC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGLLWL*FLLMPT
Trigger: GGTGGGCATAAGCAGGAATCAGAGCCACAGCAGCCC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTAACACGCCCGCAAGCTaGTGGGCAGCGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVNTPAS*WAAARA
Trigger: AGCCCTAGCCGCTGCCCAGCAGCTTGCGGGCGTGTT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGCTCCCTTTTTGTGTTaGCCCCCTGCCGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVAPFLC*PPAARG
Trigger: CCCCCGAGCGGCAGGGGGCCAACACAAAAAGGGAGC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTACGCCCGCAAGCTGCTaGGCAGCGGCTAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVTPASC*AAARAS
Trigger: AGAAGCCCTAGCCGCTGCCCAGCAGCTTGCGGGCGT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCGTTTCCGTCGCCTTaGGGCCCGGAACCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSFPSP*GPEPRE
Trigger: TTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCACCGCCGAGGCTCCCTaGCGCTTCTTCTCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLTAEAP*RFFSPD
Trigger: ATCCGGCGAGAAGAAGCGTCAGGGAGCCTCGGCGGT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATCGTCTGCGCATTGGTaGTCTGCAGGTCGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQSSAHW*SAGRSR
Trigger: CCGACTGCGACCTGCAGATCACCAATGCGCAGACGA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGCCCACCTGGACAACTaGTGCTGTGTCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQAHLDN*CCVQAL
Trigger: GAGAGCCTGGACACAGCAGCAGTTGTCCAGGTGGGC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTGCTGAGCTGGCACTaGTACTGTGGCTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLLSWH*YCGFGS
Trigger: AGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCCAAGCCAGGTACTATaGCGGACGCGGCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVPSQVL*RTRPGF
Trigger: GAAGCCAGGCCGCGTCCGCCATAGTACCTGGCTTGG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTCTCTCTCCGTGGATTaGGGTGACCCAGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLSLSVD*GDPGPG
Trigger: CCCGGGGCCTGGGTCACCCCAATCCACGGAGAGAGA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGGAATGTTCCCAGCCTaGTCGACCACCACCTGGACG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQGMFPA*STTTWT
Trigger: CGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAATACCCAGCGGGTGGTaGCTGGCCAGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQIPSGW*LARRKL
Trigger: CAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTAT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAACTATACCCAGCGGGTaGTGGCTGGCCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKTIPSG*WLARRK
Trigger: TTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGCCTCTGCCTCTTCTaGGGTATGGAGGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCLCLF*GMEVTV
Trigger: CACGGTCACCTCCATACCCCAGAAGAGGCAGAGGCA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTTCCAGAAGGACTGTaGCTTCTGCTGGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLPEGL*LLLGLT
Trigger: CGTCAGCCCCAGCAGAAGCCACAGTCCTTCTGGAAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCGTCTGCGCATTGGTaGTCTGCAGGTCGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSSAHW*SAGRSR
Trigger: CCGACTGCGACCTGCAGATCACCAATGCGCAGACGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGTAGTGACGGGCCTTaGGTCCTCTGTGATCTTTCG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGSDGP*VLCDLS
Trigger: CGAAAGATCACAGAGGACTCAAGGCCCGTCACTACC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGGCTGCTGTGGCTCTaGTTCCTGCTTATGCCCACC +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVGLLWL*FLLMPT
Trigger: GGTGGGCATAAGCAGGAATCAGAGCCACAGCAGCCC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGGGCTGCTGTGGCTCTaGTTCCTGCTTATGCCCACC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALGLLWL*FLLMPT
Trigger: GGTGGGCATAAGCAGGAATCAGAGCCACAGCAGCCC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTCCTGACTTTCTGCTaGGCTGGCACTGCTACTGTG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKVLTFC*AGTATV
Trigger: CACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGAC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGTAATTGCGGCTCTTaGCTCTGCCTCTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGNCGS*LCLFWG
Trigger: ACCCCAGAAGAGGCAGAGGCAAGAGCCGCAATTACC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAACCGTGAACGGTAATTaGGGCTCTTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKTVNGN*GSCLCL
Trigger: GAGGCAGAGGCAAGAGCCGCAATTACCGTTCACGGT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGCCCACCTGGACAACTaGTGCTGTGTCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALAHLDN*CCVQAL
Trigger: GAGAGCCTGGACACAGCAGCAGTTGTCCAGGTGGGC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTGCTGAGCTGGCACTaGTACTGTGGCTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLLSWH*YCGFGS
Trigger: AGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGACAATGTCACCCGGCTaGGTCCCCCTCGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALTMSPG*VPLAHA
Trigger: AGCATGAGCGAGGGGGACCCAGCCGGGTGACATTGT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCGCAGAGGGAGATGTaGAGCCCATCAAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSQREM*SPSKVT
Trigger: CGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCAGTGGTCTCGGAGGTaGTATTGGGGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVQWSRR*YWGWWR
Trigger: CCTCCACCACCCCCAATACCACCTCCGAGACCACTG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCAGTGGTCTCGGAGGTaGTATTGGGGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVQWSRR*YWGWWR
Trigger: CCTCCACCACCCCCAATACCACCTCCGAGACCACTG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTGAGGAGAAAACTGTaGAGGAGGAACACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLRRKL*RRNTRR
Trigger: CCTCCGGGTGTTCCTCCTCCACAGTTTTCTCCTCAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGATACCCAGCGGGTGGTaGCTGGCCAGGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALIPSGW*LARRKL
Trigger: CAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTAT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAGCTGGAGGAAACCCTaGAGGAGGGACACTATACCC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSWRKP*RRDTIP
Trigger: GGGTATAGTGTCCCTCCTCCAGGGTTTCCTCCAGCT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTGTGGCTTCGGGTCTaGCTTCCAGAAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLWLRV*LPEGLW
Trigger: CCACAGTCCTTCTGGAAGCCAGACCCGAAGCCACAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGTTGTAGGTTCCTCTaGATCAGTGGTCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGCRFL*ISGLGG
Trigger: ACCTCCGAGACCACTGATTCAGAGGAACCTACAACC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTCTCTATTTGCTaGGGGTCTAGGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKVLSIC*GSRLCS
Trigger: GGAGCACAGCCTAGACCCTCAGCAAATAGAGAGAAC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAGGACTGCCTCCAGTTaGGCTCGTACTGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKRTASS*ARTGVI
Trigger: GATTACACCAGTACGAGCTCAACTGGAGGCAGTCCT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTCCTGACTTTCTGCTaGGCTGGCACTGCTACTGTG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVLTFC*AGTATV
Trigger: CACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALCALVI*RSQSAA
Trigger: AGCTGCCGACTGCGACCTGCAGATCACCAATGCGCA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCCALVI*RSQSAA
Trigger: AGCTGCCGACTGCGACCTGCAGATCACCAATGCGCA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACACCTGGACAACTGCTaGTGTGTCCAGGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKHLDNC*CVQALF
Trigger: AAAGAGAGCCTGGACACAGCAGCAGTTGTCCAGGTG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGCCCACCTGGACAACTaGTGCTGTGTCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLAHLDN*CCVQAL
Trigger: GAGAGCCTGGACACAGCAGCAGTTGTCCAGGTGGGC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTGCTGAGCTGGCACTaGTACTGTGGCTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLLSWH*YCGFGS
Trigger: AGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGGAATGTTCCCAGCCTaGTCGACCACCACCTGGACG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLGMFPA*STTTWT
Trigger: CGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTACTATACCCAGCGGGTaGTGGCTGGCCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVTIPSG*WLARRK
Trigger: TTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGCCTCTGCCTCTTCTaGGGTATGGAGGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALCLCLF*GMEVTV
Trigger: CACGGTCACCTCCATACCCCAGAAGAGGCAGAGGCA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTGCTTATGCCCACCTaGACAACTGCTGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLLMPT*TTAAVS
Trigger: GGACACAGCAGCAGTTGTCCAGGTGGGCATAAGCAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTTCCAGAAGGACTGTaGCTTCTGCTGGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLPEGL*LLLGLT
Trigger: CGTCAGCCCCAGCAGAAGCCACAGTCCTTCTGGAAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTTCCAGAAGGACTGTaGCTTCTGCTGGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLPEGL*LLLGLT
Trigger: CGTCAGCCCCAGCAGAAGCCACAGTCCTTCTGGAAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTGTGGCTTCGGGTCTaGCTTCCAGAAGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLWLRV*LPEGLW
Trigger: CCACAGTCCTTCTGGAAGCCAGACCCGAAGCCACAG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGGTTGTAGGTTCCTCTaGATCAGTGGTCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQGCRFL*ISGLGG
Trigger: ACCTCCGAGACCACTGATTCAGAGGAACCTACAACC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGCCTTGAGTCCTCTGTaGTCTTTCGCTGTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCALSPL*SFAVVS
Trigger: CGACACCACAGCGAAAGATCACAGAGGACTCAAGGC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGCCTTGAGTCCTCTGTaGTCTTTCGCTGTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVALSPL*SFAVVS
Trigger: CGACACCACAGCGAAAGATCACAGAGGACTCAAGGC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGGTAGTGACGGGCCTTaGGTCCTCTGTGATCTTTCG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVGSDGP*VLCDLS
Trigger: CGAAAGATCACAGAGGACTCAAGGCCCGTCACTACC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATGGCCAGGAGGAAACTaGGGAGAAAACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQWPGGN*GENCGG
Trigger: TCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTAATCCACCAGAGTTaGGCTGGATCCTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKVIHQS*AGSFSS
Trigger: GGAACTGAAGGATCCAGCTCAACTCTGGTGGATTAC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTCCTGACTTTCTGCTaGGCTGGCACTGCTACTGTG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVVLTFC*AGTATV
Trigger: CACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGAC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAGGACTGCCTCCAGTTaGGCTCGTACGAAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCRTASS*ARTKRS
Trigger: GGACCTTTTCGTACGAGCTCAACTGGAGGCAGTCCT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGCACACAGGACATGGTaGCAAGGGATTCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKAHRTW*QGIPKV
Trigger: AACCTTAGGAATCCCTTGGCACCATGTCCTGTGTGC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLCALVI*RSQSAA
Trigger: AGCTGCCGACTGCGACCTGCAGATCACCAATGCGCA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATATTATTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTNYPFLQNKCASDATYYCALVI*RSQSAA
Trigger: AGCTGCCGACTGCGACCTGCAGATCACCAATGCGCA...ATAATATGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGAGGTTCCCTTTGAGTaGTCTGATGCAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKEVPFE*SDARAA
Trigger: TGCAGCTCTTGCATCAGAGCACTCAAAGGGAACCTC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGTAATTGCGGCTCTTaGCTCTGCCTCTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVGNCGS*LCLFWG
Trigger: ACCCCAGAAGAGGCAGAGGCAAGAGCCGCAATTACC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGACCGTGAACGGTAATTaGGGCTCTTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALTVNGN*GSCLCL
Trigger: GAGGCAGAGGCAAGAGCCGCAATTACCGTTCACGGT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGTGGCTCTGATTCCTaGTTATGCCCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCGSDS*LCPPGQ
Trigger: TTGTCCAGGTGGGCATAAGCAGGAATCAGAGCCACA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTCAGAATCACTTCATaGGGGAGGAGGAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLRITS*GRRRTR
Trigger: CCTCGTCCTCCTCCTCCCCCATGAAGTGATTCTGAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCGCAGAGGGAGATGTaGAGCCCATCAAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVSQREM*SPSKVT
Trigger: CGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AGTGTGCAAGTGATGCCACATATTATCCATATTCAACTGAGCTGTCATCAAAATTCGCAGAGGGAGATGTaGAGCCCATCAAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: SVQVMPHIIHIQLSCHQNSQREM*SPSKVT
Trigger: CGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGA...ATTTTGATGACAGCTCAGTTGAATATGGATAATATGTGGCATCACTTGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGCAGTCTTTGTAAGCTaGGCCAGAGAAATAGACGCG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKAVFVS*AREIDA
Trigger: CGCGTCTATTTCTCTGGCCCAGCTTACAAAGACTGC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAATCAGGTACAGGAGCTaGAGCAGAAGACGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKIRYRS*SRRRIS
Trigger: GGAAATCCGTCTTCTGCTCCAGCTCCTGTACCTGAT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGGGAGAGGAAGTGTATaGGGAGGAGGCGGATACAAA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQGRGSV*GGGGYK
Trigger: TTTGTATCCGCCTCCTCCCCATACACTTCCTCTCCC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTGAGGAGAAAACTGTaGAGGAGGAACACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLRRKL*RRNTRR
Trigger: CCTCCGGGTGTTCCTCCTCCACAGTTTTCTCCTCAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAGCTGGAGGAAACCCTaGAGGAGGGACACTATACCC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSWRKP*RRDTIP
Trigger: GGGTATAGTGTCCCTCCTCCAGGGTTTCCTCCAGCT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAGGATCATCTTCTTCTaGGGAAGAAGATGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKRIIFF*GRRWLL
Trigger: GAGGAGCCATCTTCTTCCTCAGAAGAAGATGATCCT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAATAGACGGAGCTGGGTaGGTTGATGAAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKIDGAG*VDEDVT
Trigger: AGTGACATCTTCATCAACTCACCCAGCTCCGTCTAT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGGCCAGGAGGAAACTaGGGAGAAAACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALWPGGN*GENCGG
Trigger: TCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATTTAGACCTGGAAAATaGGCGCCTACGCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKFRPGK*APTLLL
Trigger: CAAAAGGAGCGTAGGCGCTCATTTTCCAGGTCTAAA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGTCCCCTAAACGCTTaGGGAGATCTTGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCPLNA*GDLDRE
Trigger: TTCACGATCAAGATCTCCTCAAGCGTTTAGGGGACA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGTTCTCTCTATTTGCTaGGGGTCTAGGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCVLSIC*GSRLCS
Trigger: GGAGCACAGCCTAGACCCTCAGCAAATAGAGAGAAC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTAATCCACCAGAGTTaGGCTGGATCCTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVIHQS*AGSFSS
Trigger: GGAACTGAAGGATCCAGCTCAACTCTGGTGGATTAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAGGACTGCCTCCAGTTaGGCTCGTACTGGTGTAATC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCRTASS*ARTGVI
Trigger: GATTACACCAGTACGAGCTCAACTGGAGGCAGTCCT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGCACACAGGACATGGTaGCAAGGGATTCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQAHRTW*QGIPKV
Trigger: AACCTTAGGAATCCCTTGGCACCATGTCCTGTGTGC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATTTCCGCACAGGACTaGCTCCAGTTGAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVISAQD*LQLSSY
Trigger: GTACGAGCTCAACTGGAGGCAGTCCTGTGCGGAAAT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCACCTGGACAACTGCTaGTGTGTCCAGGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVHLDNC*CVQALF
Trigger: AAAGAGAGCCTGGACACAGCAGCAGTTGTCCAGGTG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCACCTGGACAACTGCTaGTGTGTCCAGGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVHLDNC*CVQALF
Trigger: AAAGAGAGCCTGGACACAGCAGCAGTTGTCCAGGTG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTCGCAGAGGGAGATGTaGAGCCCATCAAAGGTGACG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLSQREM*SPSKVT
Trigger: CGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTTCTTCAGAAGCATTaGCTTCAGCCAGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLLQKH*LQPDWQ
Trigger: CTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAATCAGGTACAGGAGCTaGAGCAGAAGACGGATTTCC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQIRYRS*SRRRIS
Trigger: GGAAATCCGTCTTCTGCTCCAGCTCCTGTACCTGAT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGGGAGAGGAAGTGTATaGGGAGGAGGCGGATACAAA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCGRGSV*GGGGYK
Trigger: TTTGTATCCGCCTCCTCCCCATACACTTCCTCTCCC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTGCTTATGCCCACCTaGACAACTGCTGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLLMPT*TTAAVS
Trigger: GGACACAGCAGCAGTTGTCCAGGTGGGCATAAGCAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGACTTTCTGCTGAGCTaGCACTGCTACTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVDFLLS*HCYCGF
Trigger: GAAGCCACAGTAGCAGTGCCAGCTCAGCAGAAAGTC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGACTTTCTGCTGAGCTaGCACTGCTACTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVDFLLS*HCYCGF
Trigger: GAAGCCACAGTAGCAGTGCCAGCTCAGCAGAAAGTC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAACATGTGTGCTCATCTaGTTCCAGGAGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQTCVLI*FQECCS
Trigger: AGAACAGCACTCCTGGAATCAGATGAGCACACATGT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATGTTGGGATGGTATTTaGATGAGCTGTCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQCWDGI*MSCLHS
Trigger: GGAGTGCAGACAGCTCATTCAAATACCATCCCAACA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGCACACAGGACATGGTaGCAAGGGATTCCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVAHRTW*QGIPKV
Trigger: AACCTTAGGAATCCCTTGGCACCATGTCCTGTGTGC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCTCTCCCCATAATCTaGTTCTTTAAGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSLPII*FFKSQR
Trigger: CCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACGGGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATCTCTCCCCATAATCTaGTTCTTTAAGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VTGTNYPFLQNKCASDATSLPII*FFKSQR
Trigger: CCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGA...TGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCCCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR GCA 90 bp GTTACGGGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATATTCTTCTTTCGTCTaGGCATTGGTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VTGTNYPFLQNKCASDATYSSFV*ALVICR
Trigger: CCTGCAGATCACCAATGCGCAGACGAAAGAAGAATA...TGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCCCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGAGGTTCCCTTTGAGTaGTCTGATGCAAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCEVPFE*SDARAA
Trigger: TGCAGCTCTTGCATCAGAGCACTCAAAGGGAACCTC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCCTGGACAAAGGTGGTaGTTGTGTTGTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCPGQRW*LCCWDG
Trigger: ACCATCCCAACAACACAAGCACCACCTTTGTCCAGG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCCTGGACAAAGGTGGTaGTTGTGTTGTTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVPGQRW*LCCWDG
Trigger: ACCATCCCAACAACACAAGCACCACCTTTGTCCAGG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCATTTCCGCACAGGACTaGCTCCAGTTGAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLISAQD*LQLSSY
Trigger: GTACGAGCTCAACTGGAGGCAGTCCTGTGCGGAAAT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCTGATTCCTGCTTATaGCCACCTGGACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSDSCL*PPGQLL
Trigger: CAGCAGTTGTCCAGGTGGGCATAAGCAGGAATCAGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTGATTCCTGCTTATaGCCACCTGGACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSDSCL*PPGQLL
Trigger: CAGCAGTTGTCCAGGTGGGCATAAGCAGGAATCAGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCTGATTCCTGCTTATaGCCACCTGGACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVSDSCL*PPGQLL
Trigger: CAGCAGTTGTCCAGGTGGGCATAAGCAGGAATCAGA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTGTGGCTCTGATTCCTaGTTATGCCCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVCGSDS*LCPPGQ
Trigger: TTGTCCAGGTGGGCATAAGCAGGAATCAGAGCCACA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGTGGCTCTGATTCCTaGTTATGCCCACCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALCGSDS*LCPPGQ
Trigger: TTGTCCAGGTGGGCATAAGCAGGAATCAGAGCCACA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGCAGTCTTTGTAAGCTaGGCCAGAGAAATAGACGCG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCAVFVS*AREIDA
Trigger: CGCGTCTATTTCTCTGGCCCAGCTTACAAAGACTGC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGCAGTCTTTGTAAGCTaGGCCAGAGAAATAGACGCG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVAVFVS*AREIDA
Trigger: CGCGTCTATTTCTCTGGCCCAGCTTACAAAGACTGC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTTCTTCAGAAGCATTaGCTTCAGCCAGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLLQKH*LQPDWQ
Trigger: CTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGTTCCTCTGAATCAGTaGTCTCGGAGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALVPLNQ*SRRWYW
Trigger: CCAATACCACCTCCGAGACCACTGATTCAGAGGAAC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTTCCTCTGAATCAGTaGTCTCGGAGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVVPLNQ*SRRWYW
Trigger: CCAATACCACCTCCGAGACCACTGATTCAGAGGAAC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTGTCCAAGCAAAGATaGGGTTCCAAGAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLSKQR*GSKNRH
Trigger: GTGCCTGTTCTTGGAACCCCATCTTTGCTTGGACAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATGTGATCTTTCGCTGTaGTGTCGCCCACGGTTTATA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQCDLSL*CRPRFI
Trigger: TATAAACCGTGGGCGACACCACAGCGAAAGATCACA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCCACCAGAGTTGAGCTaGATCCTTCAGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVPPELS*ILQFQS
Trigger: TGACTGGAACTGAAGGATCCAGCTCAACTCTGGTGG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCCACCAGAGTTGAGCTaGATCCTTCAGTTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVPPELS*ILQFQS
Trigger: TGACTGGAACTGAAGGATCCAGCTCAACTCTGGTGG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAGGATCATCTTCTTCTaGGGAAGAAGATGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCRIIFF*GRRWLL
Trigger: GAGGAGCCATCTTCTTCCTCAGAAGAAGATGATCCT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAGGATCATCTTCTTCTaGGGAAGAAGATGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALRIIFF*GRRWLL
Trigger: GAGGAGCCATCTTCTTCCTCAGAAGAAGATGATCCT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTACATGTGTGCTCATCTaGTTCCAGGAGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCTCVLI*FQECCS
Trigger: AGAACAGCACTCCTGGAATCAGATGAGCACACATGT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTACATGTGTGCTCATCTaGTTCCAGGAGTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVTCVLI*FQECCS
Trigger: AGAACAGCACTCCTGGAATCAGATGAGCACACATGT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTTGGGATGGTATTTaGATGAGCTGTCTGCACTCC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCCWDGI*MSCLHS
Trigger: GGAGTGCAGACAGCTCATTCAAATACCATCCCAACA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATGAGATCTAGACCGTaGACGGTAATTGCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVMRSRP*TVIAAL
Trigger: AAGAGCCGCAATTACCGTTCACGGTCTAGATCTCAT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGATGAGATCTAGACCGTaGACGGTAATTGCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALMRSRP*TVIAAL
Trigger: AAGAGCCGCAATTACCGTTCACGGTCTAGATCTCAT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATTTGCTGATTTAGAGTaGGCTTTTCTGGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQFADLE*AFLGVP
Trigger: TGGAACCCCCAGAAAAGCTCACTCTAAATCAGCAAA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCCTTGGTGAATTTCTaGATTTTCTCGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSLVNF*IFSDGS
Trigger: TGAGCCATCCGAGAAAATTCAGAAATTCACCAAGGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGGCTCACGTCCTTGGTaGATTTCTGAATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCGSRPW*ISEFSR
Trigger: CCGAGAAAATTCAGAAATTCACCAAGGACGTGAGCC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTCTCTTTCTCTGGCTaGGTGCTGTTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLSFSG*VLFFLF
Trigger: AAAGAGGAAGAACAGCACTCAGCCAGAGAAAGAGAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCTCTCTTTCTCTGGCTaGGTGCTGTTCTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCLSFSG*VLFFLF
Trigger: AAAGAGGAAGAACAGCACTCAGCCAGAGAAAGAGAG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGAATCATGTTTATCTaGCGTTCTAGCCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGIMFI*RSSLFG
Trigger: TCCAAAGAGGCTAGAACGTCAGATAAACATGATTCC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATATTCTTCTTTCGTCTaGGCATTGGTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQYSSFV*ALVICR
Trigger: CCTGCAGATCACCAATGCGCAGACGAAAGAAGAATA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCACGTCGGACATGTGTaGTCATCTGATTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLHVGHV*SSDSRS
Trigger: ACTCCTGGAATCAGATGAGCACACATGTCCGACGTG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ACGGGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATATTTCAGCGAGGAGACGTaGACACTCTCAATATACGTA +
Preference number: 4 (lower is better)
Translates to: TGTNYPFLQNKCASDATYFSEET*TLSIYV
Trigger: TACGTATATTGAGAGTGTCCACGTCTCCTCGCTGAA...ATATGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTAATGCACACAGGACATaGTGCCAAGGGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVNAHRT*CQGIPK
Trigger: CTTAGGAATCCCTTGGCACCATGTCCTGTGTGCATT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAATGCACACAGGACATaGTGCCAAGGGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALNAHRT*CQGIPK
Trigger: CTTAGGAATCCCTTGGCACCATGTCCTGTGTGCATT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTAATGCACACAGGACATaGTGCCAAGGGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVNAHRT*CQGIPK
Trigger: CTTAGGAATCCCTTGGCACCATGTCCTGTGTGCATT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTTCTTCAGAAGCATTaGCTTCAGCCAGATTGGCAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLLQKH*LQPDWQ
Trigger: CTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAATTGGGTCGTATTCATaGCCAGATTGCGACATCATT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKIGSYS*PDCDII
Trigger: AATGATGTCGCAATCTGGCCATGAATACGACCCAAT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGTTCCTCTGAATCAGTaGTCTCGGAGGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLVPLNQ*SRRWYW
Trigger: CCAATACCACCTCCGAGACCACTGATTCAGAGGAAC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTGTCCAAGCAAAGATaGGGTTCCAAGAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLSKQR*GSKNRH
Trigger: GTGCCTGTTCTTGGAACCCCATCTTTGCTTGGACAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTACTGGACCAGTTGTaGGGATCAACTGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLLDQL*GSTVHA
Trigger: TGCATGGACAGTTGATCCCCACAACTGGTCCAGTAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGTCGACCACCACCTaGACGAGCAGTATTTATTCT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCWSTTT*TSSIYS
Trigger: AGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGGTCGACCACCACCTaGACGAGCAGTATTTATTCT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALWSTTT*TSSIYS
Trigger: AGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGTGATCTTTCGCTGTaGTGTCGCCCACGGTTTATA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALCDLSL*CRPRFI
Trigger: TATAAACCGTGGGCGACACCACAGCGAAAGATCACA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCCCTGGACAAAGGTaGTGCTTGTGTTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFPGQR*CLCCWD
Trigger: ATCCCAACAACACAAGCACCACCTTTGTCCAGGGAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCAGTTGAGCTCGTACTaGTGTAATCCACCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVQLSSY*CNPPEL
Trigger: CAACTCTGGTGGATTACACCAGTACGAGCTCAACTG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAAGGATCTTGTTGTCTTaGTATCGGAGATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQRILLS*YRRSHQ
Trigger: CTGATGAGATCTCCGATATCAAGACAACAAGATCCT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCATAGACGGAGCTGGGTaGGTTGATGAAGATGTCACT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLIDGAG*VDEDVT
Trigger: AGTGACATCTTCATCAACTCACCCAGCTCCGTCTAT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACGCCTACGCTCCTTTTaGATCTTTTTGTATTCCATC +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQRLRSF*IFLYSI
Trigger: GATGGAATACAAAAAGATTCAAAAGGAGCGTAGGCG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCCCCTAAACGCTTaGGGAGATCTTGATCGTGAA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLCPLNA*GDLDRE
Trigger: TTCACGATCAAGATCTCCTCAAGCGTTTAGGGGACA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTTGCTGATTTAGAGTaGGCTTTTCTGGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVFADLE*AFLGVP
Trigger: TGGAACCCCCAGAAAAGCTCACTCTAAATCAGCAAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACATTTTGCGCTTTGGTaGTGGTTTCACTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKHFALW*WFHYFS
Trigger: ACTGAAATAGTGAAACCATCACCAAAGCGCAAAATG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAACTTTGCTAGATGTTaGCTCCAATTTTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKNFARC*LQFFRG
Trigger: CCCTCTGAAAAATTGGAGTCAACATCTAGCAAAGTT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGGCTCACGTCCTTGGTaGATTTCTGAATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLGSRPW*ISEFSR
Trigger: CCGAGAAAATTCAGAAATTCACCAAGGACGTGAGCC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTCCTTTTCCAACACTaGATAATCTCGATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLLFQH*IISIFG
Trigger: ACCAAAGATCGAGATTATTCAGTGTTGGAAAAGGAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGGAATCATGTTTATCTaGCGTTCTAGCCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQGIMFI*RSSLFG
Trigger: TCCAAAGAGGCTAGAACGTCAGATAAACATGATTCC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGTCTCTATTGGGAGTaGAGTCTTTATTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCLYWE*SLYLRK
Trigger: CTTCCTCAAATAAAGACTTCACTCCCAATAGAGACA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTATTCTTCTTTCGTCTaGGCATTGGTGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVYSSFV*ALVICR
Trigger: CCTGCAGATCACCAATGCGCAGACGAAAGAAGAATA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGGGATCAACTGTCCATaGAATAATGACTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALGINCP*NNDCPS
Trigger: GCTTGGACAGTCATTATTGCATGGACAGTTGATCCC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGGGATCAACTGTCCATaGAATAATGACTGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCGINCP*NNDCPS
Trigger: GCTTGGACAGTCATTATTGCATGGACAGTTGATCCC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGCTTTTCTGGATAGTTaGTACCTATGTTTCGACTTC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKAFLDS*YLCFDF
Trigger: GAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTCAGCGAGGAGACGTaGACACTCTCAATATACGTA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVFSEET*TLSIYV
Trigger: TACGTATATTGAGAGTGTCCACGTCTCCTCGCTGAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000381039.7
CDS-3UTR CCA 90 bp GGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATATTATAATGCACACAGGACATaGTGCCAAGGGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: GTNYPFLQNKCASDATYYNAHRT*CQGIPK
Trigger: CTTAGGAATCCCTTGGCACCATGTCCTGTGTGCATT...ATAATATGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR CCA 90 bp ACGGGCACAAATTACCCATTTCTACAAAATAAGTGTGCAAGTGATGCCACATATTGTAGTTGCCATCGCTaGTTCAGTTCGACTTATAAC +
Preference number: 4 (lower is better)
Translates to: TGTNYPFLQNKCASDATYCSCHR*FSSTYN
Trigger: GTTATAAGTCGAACTGAACCAGCGATGGCAACTACA...ATATGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTTACTGGACCAGTTGTaGGGATCAACTGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLLDQL*GSTVHA
Trigger: TGCATGGACAGTTGATCCCCACAACTGGTCCAGTAA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCTAATTTGTTGTGGTaGAGAAACCAGATAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSNLLW*RNQIAK
Trigger: CTTGGCTATCTGGTTTCTCCACCACAACAAATTAGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCTTCTAATTTGTTGTaGTGGAGAAACCAGATAGCC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSSNLL*WRNQIA
Trigger: GGCTATCTGGTTTCTCCACCACAACAAATTAGAAGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTAAGGTGTTGATAAATTaGCAGGAGCTGGAGGAAACC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVKVLIN*QELEET
Trigger: GGTTTCCTCCAGCTCCTGCCAATTTATCAACACCTT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTTCCCTGGACAAAGGTaGTGCTTGTGTTGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLFPGQR*CLCCWD
Trigger: ATCCCAACAACACAAGCACCACCTTTGTCCAGGGAA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGTTGTATGATTTCATaGCTCACGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCCMIS*LTSLVN
Trigger: ATTCACCAAGGACGTGAGCCATGAAATCATACAACA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAACCTCTCATGTTACATaGTCACAACTCACAATTCTG +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKTSHVT*SQLTIL
Trigger: CAGAATTGTGAGTTGTGACCATGTAACATGAGAGGT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCTTTCACTTCCATCATaGAACTTCTGGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCLSLPS*NFWEFQ
Trigger: CTGGAATTCCCAGAAGTTTCATGATGGAAGTGAAAG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTTTCACTTCCATCATaGAACTTCTGGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLSLPS*NFWEFQ
Trigger: CTGGAATTCCCAGAAGTTTCATGATGGAAGTGAAAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTTTCACTTCCATCATaGAACTTCTGGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLSLPS*NFWEFQ
Trigger: CTGGAATTCCCAGAAGTTTCATGATGGAAGTGAAAG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAGGATCTTGTTGTCTTaGTATCGGAGATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALRILLS*YRRSHQ
Trigger: CTGATGAGATCTCCGATATCAAGACAACAAGATCCT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTAGGATCTTGTTGTCTTaGTATCGGAGATCTCATCAG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVRILLS*YRRSHQ
Trigger: CTGATGAGATCTCCGATATCAAGACAACAAGATCCT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGGGCCAAGGAAGACTaGTTAGAAGTTAATGAAGAT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVGAKED*LEVNED
Trigger: ATCTTCATTAACTTCTAATCAGTCTTCCTTGGCCCC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGGGGCCAAGGAAGACTaGTTAGAAGTTAATGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALGAKED*LEVNED
Trigger: ATCTTCATTAACTTCTAATCAGTCTTCCTTGGCCCC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGTGACCATCTCTTGCTaGAAGCTTTTCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCVTISC*KLFWIV
Trigger: AACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCAC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGTGACCATCTCTTGCTaGAAGCTTTTCTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVVTISC*KLFWIV
Trigger: AACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCAC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAAACTTTGCTAGATGTTaGCTCCAATTTTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQNFARC*LQFFRG
Trigger: CCCTCTGAAAAATTGGAGTCAACATCTAGCAAAGTT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCCTTGGTGAATTTCTaGATTTTCTCGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSLVNF*IFSDGS
Trigger: TGAGCCATCCGAGAAAATTCAGAAATTCACCAAGGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCCTTGGTGAATTTCTaGATTTTCTCGGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSLVNF*IFSDGS
Trigger: TGAGCCATCCGAGAAAATTCAGAAATTCACCAAGGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTAGTGAAGTCTTTATTTaGGGAAGCACGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVSEVFI*GSTSGI
Trigger: GATTCCACTCGTGCTTCCTCAAATAAAGACTTCACT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAGTGAAGTCTTTATTTaGGGAAGCACGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSEVFI*GSTSGI
Trigger: GATTCCACTCGTGCTTCCTCAAATAAAGACTTCACT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATCTACGTTTGGAACTTaGATACTCTCTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQSTFGT*ILSGVI
Trigger: TATGACACCAGAGAGTATTCAAGTTCCAAACGTAGA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTCTCTCCCCATAATCTaGTTCTTTAAGTCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLSLPII*FFKSQR
Trigger: CCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGGTTTTATCACCCTTTaGTTTTGGTTTATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKGFITL*FWFIPF
Trigger: GAAAGGGATAAACCAAAAGCAAAGGGTGATAAAACC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATATCAGGTTCCATTTTaGGCTTTGGTGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQYQVPF*ALVMVS
Trigger: TGAAACCATCACCAAAGCGCAAAATGGAACCTGATA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACTTGCTTCTAATACATaGTTCTCACGATCCTTACAA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLASNT*FSRSLQ
Trigger: TTGTAAGGATCGTGAGAAGCATGTATTAGAAGCAAG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCCAATTCCACTTCAGTaGCTGCATGTTTCTTATGCT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCPIPLQ*LHVSYA
Trigger: AGCATAAGAAACATGCAGGCACTGAAGTGGAATTGG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCCAATTCCACTTCAGTaGCTGCATGTTTCTTATGCT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVPIPLQ*LHVSYA
Trigger: AGCATAAGAAACATGCAGGCACTGAAGTGGAATTGG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTTCAGCGAGGAGACGTaGACACTCTCAATATACGTA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLFSEET*TLSIYV
Trigger: TACGTATATTGAGAGTGTCCACGTCTCCTCGCTGAA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTGTAGTTGCCATCGCTaGTTCAGTTCGACTTATAAC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVCSCHR*FSSTYN
Trigger: GTTATAAGTCGAACTGAACCAGCGATGGCAACTACA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTAGTTGCCATCGCTaGTTCAGTTCGACTTATAAC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCCSCHR*FSSTYN
Trigger: GTTATAAGTCGAACTGAACCAGCGATGGCAACTACA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATTGGGTCGTATTCATaGCCAGATTGCGACATCATT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVIGSYS*PDCDII
Trigger: AATGATGTCGCAATCTGGCCATGAATACGACCCAAT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTTCATGTAATTGATTaGGTCGTATTCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLHVID*VVFMAR
Trigger: TCTGGCCATGAATACGACCCAATCAATTACATGAAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATCTAATTTGTTGTGGTaGAGAAACCAGATAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQSNLLW*RNQIAK
Trigger: CTTGGCTATCTGGTTTCTCCACCACAACAAATTAGA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTATAGAATTCTTCCCTaGACAAAGGTGGTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVYRILP*TKVVLV
Trigger: CACAAGCACCACCTTTGTCCAGGGAAGAATTCTATA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTATAGAATTCTTCCCTaGACAAAGGTGGTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALYRILP*TKVVLV
Trigger: CACAAGCACCACCTTTGTCCAGGGAAGAATTCTATA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGCGTTCTTTTTCAAATaGGTCTCTAAAGTCAACACT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKAFFFK*VSKVNT
Trigger: AGTGTTGACTTTAGAGACCCATTTGAAAAAGAACGC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAATTCCTGATGTTAAGTaGCAAAAATCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKIPDVK*QKSLWR
Trigger: TCTCCAGAGAGATTTTTGCCACTTAACATCAGGAAT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATTACTCTCTTTCTCTaGCTGAGTGCTGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVITLFL*LSAVLP
Trigger: AGGAAGAACAGCACTCAGCCAGAGAAAGAGAGTAAT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGATTACTCTCTTTCTCTaGCTGAGTGCTGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALITLFL*LSAVLP
Trigger: AGGAAGAACAGCACTCAGCCAGAGAAAGAGAGTAAT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTTGAGGAAGCACGAGTaGAATCATGTTTATCTGACG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLRKHE*NHVYLT
Trigger: CGTCAGATAAACATGATTCCACTCGTGCTTCCTCAA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTGAGGAAGCACGAGTaGAATCATGTTTATCTGACG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCLRKHE*NHVYLT
Trigger: CGTCAGATAAACATGATTCCACTCGTGCTTCCTCAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGGGGCCAAGGAAGACTaGTTAGAAGTTAATGAAGAT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLGAKED*LEVNED
Trigger: ATCTTCATTAACTTCTAATCAGTCTTCCTTGGCCCC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCGTTCTGTTTCCCCTTaGGGTACATTACGTTTATTA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALRSVSP*GTLRLL
Trigger: TAATAAACGTAATGTACCTCAAGGGGAAACAGAACG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTTCTGTTTCCCCTTaGGGTACATTACGTTTATTA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVRSVSP*GTLRLL
Trigger: TAATAAACGTAATGTACCTCAAGGGGAAACAGAACG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTCCTTTTCCAACACTaGATAATCTCGATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLLFQH*IISIFG
Trigger: ACCAAAGATCGAGATTATTCAGTGTTGGAAAAGGAG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTCCTTTTCCAACACTaGATAATCTCGATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLLFQH*IISIFG
Trigger: ACCAAAGATCGAGATTATTCAGTGTTGGAAAAGGAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGGAATCATGTTTATCTaGCGTTCTAGCCTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLGIMFI*RSSLFG
Trigger: TCCAAAGAGGCTAGAACGTCAGATAAACATGATTCC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGTCTCTATTGGGAGTaGAGTCTTTATTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALCLYWE*SLYLRK
Trigger: CTTCCTCAAATAAAGACTTCACTCCCAATAGAGACA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTGTCTCTATTGGGAGTaGAGTCTTTATTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVCLYWE*SLYLRK
Trigger: CTTCCTCAAATAAAGACTTCACTCCCAATAGAGACA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCTACGTTTGGAACTTaGATACTCTCTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSTFGT*ILSGVI
Trigger: TATGACACCAGAGAGTATTCAAGTTCCAAACGTAGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATATTCATGGCCAGATTaGGACATCATTGCTTTAATT +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKYSWPD*DIIALI
Trigger: AATTAAAGCAATGATGTCGCAATCTGGCCATGAATA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAATTGCATATGCTTCTaGATCTATAGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKNCICF*IYSWYC
Trigger: GCAATACCAACTATAGATGCAGAAGCATATGCAATT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAACTTCTCCCATAATATaGTTTCATGTCATATGGTGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQTSPII*FHVIWW
Trigger: CCACCATATGACATGAAAGCATATTATGGGAGAAGT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGCTTTTCTGGATAGTTaGTACCTATGTTTCGACTTC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALAFLDS*YLCFDF
Trigger: GAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTATCAGGTTCCATTTTaGGCTTTGGTGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALYQVPF*ALVMVS
Trigger: TGAAACCATCACCAAAGCGCAAAATGGAACCTGATA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCCAATTCCACTTCAGTaGCTGCATGTTTCTTATGCT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLPIPLQ*LHVSYA
Trigger: AGCATAAGAAACATGCAGGCACTGAAGTGGAATTGG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTTCATGTAATTGATTaGGTCGTATTCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLHVID*VVFMAR
Trigger: TCTGGCCATGAATACGACCCAATCAATTACATGAAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCTTCTAATTTGTTGTaGTGGAGAAACCAGATAGCC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSSNLL*WRNQIA
Trigger: GGCTATCTGGTTTCTCCACCACAACAAATTAGAAGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTTGTGTTGTTGGGATaGTATTTGAATGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLVLLG*YLNELS
Trigger: AGACAGCTCATTCAAATACCATCCCAACAACACAAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCCATCTACTTTTTCTTaGGGTCCTTTAGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALPSTFS*GPLAGF
Trigger: AAAACCTGCTAAAGGACCCCAAGAAAAAGTAGATGG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGATAACATCTTCAGCTaGCGCGGTATTGTCATTATT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVDNIFS*RGIVII
Trigger: AATAATGACAATACCGCGCCAGCTGAAGATGTTATC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGATAACATCTTCAGCTaGCGCGGTATTGTCATTATT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCDNIFS*RGIVII
Trigger: AATAATGACAATACCGCGCCAGCTGAAGATGTTATC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTGTTGTATGATTTCATaGCTCACGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVCCMIS*LTSLVN
Trigger: ATTCACCAAGGACGTGAGCCATGAAATCATACAACA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCATTACTCTCTTTCTCTaGCTGAGTGCTGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLITLFL*LSAVLP
Trigger: AGGAAGAACAGCACTCAGCCAGAGAAAGAGAGTAAT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTTGAGGAAGCACGAGTaGAATCATGTTTATCTGACG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLRKHE*NHVYLT
Trigger: CGTCAGATAAACATGATTCCACTCGTGCTTCCTCAA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATTTCATCTCTACGTTTaGAACTTGAATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQFHLYV*NLNTLW
Trigger: CCAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATTCAACCTGTGTCTCTaGTGGGTTAAGTATATAAAG +
Preference number: 4 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQFNLCL*WVKYIK
Trigger: CTTTATATACTTAACCCACCAGAGACACAGGTTGAA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGACCTCTCATGTTACATaGTCACAACTCACAATTCTG +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALTSHVT*SQLTIL
Trigger: CAGAATTGTGAGTTGTGACCATGTAACATGAGAGGT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCATTTTGCGCTTTGGTaGTGGTTTCACTATTTCAGT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLHFALW*WFHYFS
Trigger: ACTGAAATAGTGAAACCATCACCAAAGCGCAAAATG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR TCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTTTCTCAGGATACTTaGCTATATTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLSQDT*LYLMAL
Trigger: CAAAGCCATCAAATATAGTCAAGTATCCTGAGAAAG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCTTTCTCAGGATACTTaGCTATATTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCLSQDT*LYLMAL
Trigger: CAAAGCCATCAAATATAGTCAAGTATCCTGAGAAAG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTCTACGTTTGGAACTTaGATACTCTCTGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLSTFGT*ILSGVI
Trigger: TATGACACCAGAGAGTATTCAAGTTCCAAACGTAGA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVSVGKH*TFHIRI
Trigger: GATCCTAATATGAAAGGTGCAATGCTTACCAACACT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSVGKH*TFHIRI
Trigger: GATCCTAATATGAAAGGTGCAATGCTTACCAACACT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATC +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVSVGKH*TFHIRI
Trigger: GATCCTAATATGAAAGGTGCAATGCTTACCAACACT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGGTTTTATCACCCTTTaGTTTTGGTTTATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVGFITL*FWFIPF
Trigger: GAAAGGGATAAACCAAAAGCAAAGGGTGATAAAACC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTTGCTTCTAATACATaGTTCTCACGATCCTTACAA +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLASNT*FSRSLQ
Trigger: TTGTAAGGATCGTGAGAAGCATGTATTAGAAGCAAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTTCATGTAATTGATTaGGTCGTATTCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLHVID*VVFMAR
Trigger: TCTGGCCATGAATACGACCCAATCAATTACATGAAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTACACAACAATTCATCTaGGATAGGATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCTQQFI*DRIIFF
Trigger: GAAGAAGATGATCCTATCCCAGATGAATTGTTGTGT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTACACAACAATTCATCTaGGATAGGATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVTQQFI*DRIIFF
Trigger: GAAGAAGATGATCCTATCCCAGATGAATTGTTGTGT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTGCAAGAGCTGCAGCTaGCAATATTTTATTATCAGA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVCKSCS*QYFIIR
Trigger: TCTGATAATAAAATATTGCCAGCTGCAGCTCTTGCA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTTGTGTTGTTGGGATaGTATTTGAATGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLVLLG*YLNELS
Trigger: AGACAGCTCATTCAAATACCATCCCAACAACACAAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCATGTCATATGGTGGTaGAACTTCTCTGTATCTATT +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVHVIWW*NFSVSI
Trigger: AATAGATACAGAGAAGTTCCACCACCATATGACATG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTTCATGTCATATGGTaGTGGAACTTCTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVFHVIW*WNFSVS
Trigger: AGATACAGAGAAGTTCCACCACCATATGACATGAAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGCGTTCTTTTTCAAATaGGTCTCTAAAGTCAACACT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCAFFFK*VSKVNT
Trigger: AGTGTTGACTTTAGAGACCCATTTGAAAAAGAACGC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTATTCCTGATGTTAAGTaGCAAAAATCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCIPDVK*QKSLWR
Trigger: TCTCCAGAGAGATTTTTGCCACTTAACATCAGGAAT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCATCATTCTTCCGTTTaGTTTTATCACCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCHHSSV*FYHPLL
Trigger: AAGCAAAGGGTGATAAAACCAAACGGAAGAATGATG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCCATCTACTTTTTCTTaGGGTCCTTTAGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLPSTFS*GPLAGF
Trigger: AAAACCTGCTAAAGGACCCCAAGAAAAAGTAGATGG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGATAACATCTTCAGCTaGCGCGGTATTGTCATTATT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLDNIFS*RGIVII
Trigger: AATAATGACAATACCGCGCCAGCTGAAGATGTTATC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCATCTTTATCCCATTTaGATTGAGGAACCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCHLYPI*IEEPES
Trigger: TGATTCAGGTTCCTCAATCCAAATGGGATAAAGATG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCATCTTTATCCCATTTaGATTGAGGAACCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVHLYPI*IEEPES
Trigger: TGATTCAGGTTCCTCAATCCAAATGGGATAAAGATG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTTGTATGATTTCATaGCTCACGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLCCMIS*LTSLVN
Trigger: ATTCACCAAGGACGTGAGCCATGAAATCATACAACA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTCATCTCTACGTTTaGAACTTGAATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFHLYV*NLNTLW
Trigger: CCAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTTTCATCTCTACGTTTaGAACTTGAATACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVFHLYV*NLNTLW
Trigger: CCAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCAACCTGTGTCTCTaGTGGGTTAAGTATATAAAG +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFNLCL*WVKYIK
Trigger: CTTTATATACTTAACCCACCAGAGACACAGGTTGAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTCAACCTGTGTCTCTaGTGGGTTAAGTATATAAAG +
Preference number: 4 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVFNLCL*WVKYIK
Trigger: CTTTATATACTTAACCCACCAGAGACACAGGTTGAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCACCTCTCATGTTACATaGTCACAACTCACAATTCTG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLTSHVT*SQLTIL
Trigger: CAGAATTGTGAGTTGTGACCATGTAACATGAGAGGT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR TCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTTTCTCAGGATACTTaGCTATATTTGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLSQDT*LYLMAL
Trigger: CAAAGCCATCAAATATAGTCAAGTATCCTGAGAAAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATTCATGGCCAGATTaGGACATCATTGCTTTAATT +
Preference number: 4 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCYSWPD*DIIALI
Trigger: AATTAAAGCAATGATGTCGCAATCTGGCCATGAATA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR GCA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAATTGCATATGCTTCTaGATCTATAGTTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: VTWSQLTILYKSSCYKALNCICF*IYSWYC
Trigger: GCAATACCAACTATAGATGCAGAAGCATATGCAATT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCAAGAGCTGCAGCTaGCAATATTTTATTATCAGA +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLCKSCS*QYFIIR
Trigger: TCTGATAATAAAATATTGCCAGCTGCAGCTCTTGCA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCATGTCATATGGTGGTaGAACTTCTCTGTATCTATT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLHVIWW*NFSVSI
Trigger: AATAGATACAGAGAAGTTCCACCACCATATGACATG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCATCATTCTTCCGTTTaGTTTTATCACCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLHHSSV*FYHPLL
Trigger: AAGCAAAGGGTGATAAAACCAAACGGAAGAATGATG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR GCA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTATTCATGGCCAGATTaGGACATCATTGCTTTAATT +
Preference number: 4 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLYSWPD*DIIALI
Trigger: AATTAAAGCAATGATGTCGCAATCTGGCCATGAATA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS TCA 90 bp GGCCGGGTGGCTTCGGCGGACCCCGGGGACACCGCCGAGGCTCCCTaGCGCTTCTTCTCGCCGGATCCTCCGCGCTTCGCTCGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: GRVASADPGDTAEAP*RFFSPDPPRFARLS
Trigger: CGAAAGGCGAGCGAAGCGCGGAGGATCCGGCGAGAAGAAGCGTCAGGGAGCCTCGGCGGTGTCCCCGGGGTCCGCCGAAGCCACCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS CCA 90 bp AGAGGGCCTAGGCCCGGAGTCCACGAGCGGCCTCACGCCTCCTCCTaGCTTCCGGACGACCGGCGTCAGCTTCCCCAGGCCCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RGPRPGVHERPHASS*LPDDRRQLPQAQAQ
Trigger: CTGGGCCTGGGCCTGGGGAAGCTGACGCCGGTCGTCCGGAAGCCAGGAGGAGGCGTGAGGCCGCTCGTGGACTCCGGGCCTAGGCCCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS TCA 90 bp TCGCCGGATCCTCCGCGCTTCGCTCGCCTTTCGTTTCCGTCGCCTTaGGGCCCGGAACCGCGAGAACACGCCCGCAAGCTGCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SPDPPRFARLSFPSP*GPEPREHARKLLGS
Trigger: GCTGCCCAGCAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGCGAGCGAAGCGCGGAGGATCCGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS GCA 90 bp TTCCGTCGCCTTGAGGCCCGGAACCGCGAGAACACGCCCGCAAGCTaGTGGGCAGCGGCTAGGGCTTCTCCGGCTCCCTTTTTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: FRRLEARNRENTPAS*WAAARASPAPFLCW
Trigger: CCAACACAAAAAGGGAGCCGGAGAAGCCCTAGCCGCTGCCCAGCAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000568015.5
ENST00000568316.1
CDS CCA 90 bp CCCAGCGGGTGGTGGCTGGCCAGGAGGAAACTGAGGAGAAAACTGTaGAGGAGGAACACCCGGAGGGAGAGGAAGTGTATGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSGWWLARRKLRRKL*RRNTRRERKCMGRR
Trigger: CCTCCTCCCCATACACTTCCTCTCCCTCCGGGTGTTCCTCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS TCA 90 bp GGAGGGACACTATACCCAGCGGGTGGTGGCTGGCCAGGAGGAAACTaGGGAGAAAACTGTGGAGGAGGAACACCCGGAGGGAGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GGTLYPAGGGWPGGN*GENCGGGTPGGRGS
Trigger: ACTTCCTCTCCCTCCGGGTGTTCCTCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGTGTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS CCA 90 bp AGCTGGAGGAAACCCTGGAGGAGGGACACTATACCCAGCGGGTGGTaGCTGGCCAGGAGGAAACTGAGGAGAAAACTGTGGAGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: SWRKPWRRDTIPSGW*LARRKLRRKLWRRN
Trigger: GTTCCTCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGTGTCCCTCCTCCAGGGTTTCCTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 90 bp GGAGAAAACTGTGGAGGAGGAACACCCGGAGGGAGAGGAAGTGTATaGGGAGGAGGCGGATACAAAGGAGGTGGTGGAACAGGTACAAAG +
Preference number: 5 (lower is better)
Translates to: GENCGGGTPGGRGSV*GGGGYKGGGGTGTK
Trigger: CTTTGTACCTGTTCCACCACCTCCTTTGTATCCGCCTCCTCCCCATACACTTCCTCTCCCTCCGGGTGTTCCTCCTCCACAGTTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS TCA 90 bp GGTGGAACAGGTACAAAGACTGGAGTTGCTGGTAGTGACGGGCCTTaGGTCCTCTGTGATCTTTCGCTGTGGTGTCGCCCACGGTTTATA +
Preference number: 5 (lower is better)
Translates to: GGTGTKTGVAGSDGP*VLCDLSLWCRPRFI
Trigger: TATAAACCGTGGGCGACACCACAGCGAAAGATCACAGAGGACTCAAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTACCTGTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS GCA 90 bp TGCAGGTCGCAGTCGGCAGCTTTCAGCTTCTCTCTCCCCATAATCTaGTTCTTTAAGTCGCAGAGGGAGATGTGGAGCCCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: CRSQSAAFSFSLPII*FFKSQREMWSPSKV
Trigger: CACCTTTGATGGGCTCCACATCTCCCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000452655.6
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS CCA 90 bp TCGCCCACGGTTTATACTTTGTTCCCAGCCTGGTCGACCACCACCTaGACGAGCAGTATTTATTCTTACTGGACCAGTTGTGGGGATCAA +
Preference number: 5 (lower is better)
Translates to: SPTVYTLFPAWSTTT*TSSIYSYWTSCGDQ
Trigger: TTGATCCCCACAACTGGTCCAGTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACAAAGTATAAACCGTGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570185.1
CDS TCA 90 bp CTTTTCCTTCTTTTTCTTCTTCTTCTTGCTGTCCTGACTTTCTGCTaGGCTGGCACTGCTACTGTGGCTTCGGGTCTGGCTTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LFLLFLLLLAVLTFC*AGTATVASGLASRR
Trigger: CCTTCTGGAAGCCAGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGACAGCAAGAAGAAGAAGAAAAAGAAGGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
CDS CCA 90 bp TGGTGGAGAAACCAGATAGCCAAGTTTGTTGGAATGTTCCCAGCCTaGTCGACCACCACCTGGACGAGCAGTATTTATTCTTACTGGACC +
Preference number: 5 (lower is better)
Translates to: WWRNQIAKFVGMFPA*STTTWTSSIYSYWT
Trigger: GGTCCAGTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAACTTGGCTATCTGGTTTCTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGCTCCCTTTTTGTGTaGGCCCCCTGCCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVGSLFV*APCRSG
Trigger: CCCCGAGCGGCAGGGGGCCAACACAAAAAGGGAGCC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS TCA 90 bp TGGGGTATGGAGGTGACCGTGAATAGGAACGAGAATGTGAGCGGCTaGATGATCGAGAATAAGAGCGTGAACGTGTTGAACCAGATCTTG +
Preference number: 5 (lower is better)
Translates to: WGMEVTVNRNENVSG*MIENKSVNVLNQIL
Trigger: CAAGATCTGGTTCAACACGTTCACGCTCTTATTCTCGATCATTCAGCCGCTCACATTCTCGTTCCTATTCACGGTCACCTCCATACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 90 bp ATAGCCAAGTTTGTTGGAATGTTCCCAGCCTGGTCGACCACCACCTaGACGAGCAGTATTTATTCTTACTGGACCAGTTGTGGGGATCAA +
Preference number: 5 (lower is better)
Translates to: IAKFVGMFPAWSTTT*TSSIYSYWTSCGDQ
Trigger: TTGATCCCCACAACTGGTCCAGTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAACTTGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS GCA 90 bp GCATTATCATCAGTATATTCTTCTTTCGTCTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCTTTCAGCTTCTCTCTCCCCATAATC +
Preference number: 5 (lower is better)
Translates to: ALSSVYSSFVCALVI*RSQSAAFSFSLPII
Trigger: GATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAATGCGCAGACGAAAGAAGAATATACTGATGATAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000452655.6
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTCTCCGGCTCCCTTTTaGTGTTGGCCCCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVSPAPF*CWPPAA
Trigger: AGCGGCAGGGGGCCAACACAAAAAGGGAGCCGGAGA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTTCGTTTCCGTCGCCTaGAGGCCCGGAACCGCGAGA +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVFVSVA*RPGTAR
Trigger: TCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCTTTCGTCTGCGCATaGGTGATCTGCAGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSFVCA*VICRSQ
Trigger: CTGCGACCTGCAGATCACCAATGCGCAGACGAAAGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS TCA 90 bp TCCCTGGACAAAGGTGGTGCTTGTGTTGTTGGGATGGTATTTGAATaGGCTGTCTGCACTCCTGATGATACCCAAGGTGTTGATAAATTG +
Preference number: 5 (lower is better)
Translates to: SLDKGGACVVGMVFE*AVCTPDDTQGVDKL
Trigger: CAATTTATCAACACCTTGGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 90 bp TATAGAATTCTTCCCTGGACAAAGGTGGTGCTTGTGTTGTTGGGATaGTATTTGAATGAGCTGTCTGCACTCCTGATGATACCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: YRILPWTKVVLVLLG*YLNELSALLMIPKV
Trigger: CACCTTGGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAACAGGACTGCCTCCAGTaGAGCTCGTACTGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKQDCLQ*SSYWCN
Trigger: ATTACACCAGTACGAGCTCAACTGGAGGCAGTCCTG...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS TCA 90 bp GGGAATTCCTTAGGTAATTACATGATGTTTAGGTGTCTGCAAGGCTaGAGAAAGTCATTCTGGGGGCACTCAAACCTTAGACCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GNSLGNYMMFRCLQG*RKSFWGHSNLRPCL
Trigger: CAAACAGGGTCTAAGGTTTGAGTGCCCCCAGAATGACTTTCTTCAGCCTTGCAGACACCTAAACATCATGTAATTACCTAAGGAATTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCTTTCGTCTGCGCATaGGTGATCTGCAGGTCGCAG +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSFVCA*VICRSQ
Trigger: CTGCGACCTGCAGATCACCAATGCGCAGACGAAAGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTACAAAGACTGGAGTaGCTGGTAGTGACGGGCCTT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVQRLE*LVVTGL
Trigger: AAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACAGGACTGCCTCCAGTaGAGCTCGTACTGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQQDCLQ*SSYWCN
Trigger: ATTACACCAGTACGAGCTCAACTGGAGGCAGTCCTG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCAGGACTGCCTCCAGTaGAGCTCGTACGAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALQDCLQ*SSYEKV
Trigger: GACCTTTTCGTACGAGCTCAACTGGAGGCAGTCCTG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381039.7
CDS GCA 90 bp CTTGTTCATTCAGACGGTCCAAATTACTCTCTTTCTCTGGCTGAGTaGTGTTCTTCCTCTTTTCAGGGTTCTCCTTTTCCAACACTGAAT +
Preference number: 5 (lower is better)
Translates to: LVHSDGPNYSLSLAE*CSSSFQGSPFPTLN
Trigger: ATTCAGTGTTGGAAAAGGAGAACCCTGAAAAGAGGAAGAACAGCACTCAGCCAGAGAAAGAGAGTAATTTGGACCGTCTGAATGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATTCTTACTGGACCAGTaGTGGGGATCAACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKFLLDQ*WGSTVH
Trigger: ATGGACAGTTGATCCCCACAACTGGTCCAGTAAGAA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGTACAAAGACTGGAGTaGCTGGTAGTGACGGGCCTT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALVQRLE*LVVTGL
Trigger: AAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTAC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATGTAATCCACCAGAGTaGAGCTGGATCCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKCNPPE*SWILQF
Trigger: GAACTGAAGGATCCAGCTCAACTCTGGTGGATTACA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS TCA 90 bp CCTCCAGTTGAGCTCGTACGAAAAGGTCCATCTGATTTTTCTGAATaGACTGATATGGATACTGTTGCAGTTATATCAGGTACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PPVELVRKGPSDFSE*TDMDTVAVISGTGA
Trigger: AGCTCCTGTACCTGATATAACTGCAACAGTATCCATATCAGTTCATTCAGAAAAATCAGATGGACCTTTTCGTACGAGCTCAACTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381039.7
CDS GCA 90 bp TCTTCCATAAGAGCGGTAATTGCAATTGAGGAGGTTCCCTTTGAGTaGTCTGATGCAAGAGCTGCAGCTGGCAATATTTTATTATCAGAA +
Preference number: 5 (lower is better)
Translates to: SSIRAVIAIEEVPFE*SDARAAAGNILLSE
Trigger: TTCTGATAATAAAATATTGCCAGCTGCAGCTCTTGCATCAGAGCACTCAAAGGGAACCTCCTCAATTGCAATTACCGCTCTTATGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS GCA 90 bp CCTTCTGATTGTGACCATCTCTTGCTGAAAGCTTTTCTGGATAGTTaGTACCTATGTTTCGACTTCTATGACTTTGCCCACCAACATAGT +
Preference number: 5 (lower is better)
Translates to: PSDCDHLLLKAFLDS*YLCFDFYDFAHQHS
Trigger: ACTATGTTGGTGGGCAAAGTCATAGAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATCAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTTTGGCTTCAGCCAGATaGGCAGTCTTTGTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLASAR*AVFVSW
Trigger: CCAGCTTACAAAGACTGCCAATCTGGCTGAAGCCAA...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTTGGCTTCAGCCAGATaGGCAGTCTTTGTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLASAR*AVFVSW
Trigger: CCAGCTTACAAAGACTGCCAATCTGGCTGAAGCCAA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATCTTCTTCAGAAGCATaGGCTTCAGCCAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQSSSEA*ASARLA
Trigger: TGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTACGGAGCTGGGTGAGTaGATGAAGATGTCACTGGAA +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVTELGE*MKMSLE
Trigger: TTCCAGTGACATCTTCATCAACTCACCCAGCTCCGT...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTACGGAGCTGGGTGAGTaGATGAAGATGTCACTGGAA +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVTELGE*MKMSLE
Trigger: TTCCAGTGACATCTTCATCAACTCACCCAGCTCCGT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTGAGGAGGTTCCCTTaGAGTGCTCTGATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLRRFP*SALMQE
Trigger: CTCTTGCATCAGAGCACTCAAAGGGAACCTCCTCAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATTGTTGGGATGGTATTaGAATGAGCTGTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKLLGWY*NELSAL
Trigger: GAGTGCAGACAGCTCATTCAAATACCATCCCAACAA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTGGTGCTTGTGTTGTaGGGATGGTATTTGAATGAG +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKVVLVL*GWYLNE
Trigger: CTCATTCAAATACCATCCCAACAACACAAGCACCAC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCGACTTCTATGACTTaGCCCACCAACATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSTSMT*PTNIVF
Trigger: GAAGACTATGTTGGTGGGCAAAGTCATAGAAGTCGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATGTAATCCACCAGAGTaGAGCTGGATCCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQCNPPE*SWILQF
Trigger: GAACTGAAGGATCCAGCTCAACTCTGGTGGATTACA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS TCA 90 bp ACCTCATGTTGTATGATTTCATGGCTCACGTCCTTGGTGAATTTCTaGATTTTCTCGGATGGCTCACTTTCTTTCTCAGGATACTTGACT +
Preference number: 5 (lower is better)
Translates to: TSCCMISWLTSLVNF*IFSDGSLSFSGYLT
Trigger: AGTCAAGTATCCTGAGAAAGAAAGTGAGCCATCCGAGAAAATTCAGAAATTCACCAAGGACGTGAGCCATGAAATCATACAACATGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS GCA 90 bp TTATCGCAAAACATGGCATATACAGTGATTCAGGAGGTAACAATTTaGCCCTCTGCCAAACATACACATTGGTATATTCCTGCAAACAGC +
Preference number: 5 (lower is better)
Translates to: LSQNMAYTVIQEVTI*PSAKHTHWYIPANS
Trigger: GCTGTTTGCAGGAATATACCAATGTGTATGTTTGGCAGAGGGGCAAATTGTTACCTCCTGAATCACTGTATATGCCATGTTTTGCGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTTCTTCAGAAGCATaGGCTTCAGCCAGATTGGCA +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSSSEA*ASARLA
Trigger: TGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAGGAGAAACATCATTTaGATGACACGTCGGACATGT +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKRRNII*MTRRTC
Trigger: ACATGTCCGACGTGTCATCAAAATGATGTTTCTCCT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGAGGATCTTGTTGTCTaGATATCGGAGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKEDLVV*ISEISS
Trigger: TGATGAGATCTCCGATATCAAGACAACAAGATCCTC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCTTACTGGACCAGTaGTGGGGATCAACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFLLDQ*WGSTVH
Trigger: ATGGACAGTTGATCCCCACAACTGGTCCAGTAAGAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCTCCCCTCTTCTAATTaGTTGTGGTGGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVLPSSN*LWWRNQ
Trigger: CTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAAAGGTGGTGCTTGTGTaGTTGGGATGGTATTTGAAT +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKKVVLV*LGWYLN
Trigger: ATTCAAATACCATCCCAACAACACAAGCACCACCTT...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGGACAAAGGTGGTGCTaGTGTTGTTGGGATGGTATT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCGQRWC*CCWDGI
Trigger: AATACCATCCCAACAACACAAGCACCACCTTTGTCC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGACGCTTGAGGAGATCTaGATCGTGAATGATAGCGTC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALTLEEI*IVNDSV
Trigger: GACGCTATCATTCACGATCAAGATCTCCTCAAGCGT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGATGATGATTTAGTATaGTCAGTCTTCGGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKDDDLV*SVFGVS
Trigger: GGAGACTCCGAAGACTGACAATACTAAATCATCATC...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTATCAGGTTCCATTTaGCGCTTTGGTGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVSGSI*RFGDGF
Trigger: GAAACCATCACCAAAGCGCAAAATGGAACCTGATAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS GCA 90 bp AAACATGGCATATACAGTGATTCAGGAGGTAACAATTTGCCCCTCTaGCAAACATACACATTGGTATATTCCTGCAAACAGCTTTACACA +
Preference number: 5 (lower is better)
Translates to: KHGIYSDSGGNNLPL*QTYTLVYSCKQLYT
Trigger: TGTGTAAAGCTGTTTGCAGGAATATACCAATGTGTATGTTTGGCAGAGGGGCAAATTGTTACCTCCTGAATCACTGTATATGCCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTCCCCTCTTCTAATTaGTTGTGGTGGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLPSSN*LWWRNQ
Trigger: CTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTATGATACCCAAGGTGTaGATAAATTGGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCMIPKV*INWQEL
Trigger: CAGCTCCTGCCAATTTATCAACACCTTGGGTATCAT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTGTTGGGATGGTATTaGAATGAGCTGTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLLGWY*NELSAL
Trigger: GAGTGCAGACAGCTCATTCAAATACCATCCCAACAA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGTGGTGCTTGTGTTGTaGGGATGGTATTTGAATGAG +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALVVLVL*GWYLNE
Trigger: CTCATTCAAATACCATCCCAACAACACAAGCACCAC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAAAGGTGGTGCTTGTGTaGTTGGGATGGTATTTGAAT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQKVVLV*LGWYLN
Trigger: ATTCAAATACCATCCCAACAACACAAGCACCACCTT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCGGACAAAGGTGGTGCTaGTGTTGTTGGGATGGTATT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLGQRWC*CCWDGI
Trigger: AATACCATCCCAACAACACAAGCACCACCTTTGTCC...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGCGCCTACGCTCCTTTaGAATCTTTTTGTATTCCAT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQAPTLL*NLFVFH
Trigger: ATGGAATACAAAAAGATTCAAAAGGAGCGTAGGCGC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCGACTTCTATGACTTaGCCCACCAACATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVSTSMT*PTNIVF
Trigger: GAAGACTATGTTGGTGGGCAAAGTCATAGAAGTCGA...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACCATCATTCTTCCGTTaGGTTTTATCACCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQPSFFR*VLSPFA
Trigger: AGCAAAGGGTGATAAAACCAAACGGAAGAATGATGG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGATGATGATTTAGTATaGTCAGTCTTCGGAGTCTCC +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQDDDLV*SVFGVS
Trigger: GGAGACTCCGAAGACTGACAATACTAAATCATCATC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGTATCAGGTTCCATTTaGCGCTTTGGTGATGGTTTC +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCVSGSI*RFGDGF
Trigger: GAAACCATCACCAAAGCGCAAAATGGAACCTGATAC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATCAGCTGGCGCGGTATaGTCATTATTATATTCTTCC +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQSAGAV*SLLYSS
Trigger: GGAAGAATATAATAATGACAATACCGCGCCAGCTGA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAAACTGGGGTTTAGGCTaGACAGTACTCTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQNWGLG*TVLLSI
Trigger: AATTGACAAGAGTACTGTCAAGCCTAAACCCCAGTT...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTATTCATGGCCAGATaGCGACATCATTGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVFMAR*RHHCFN
Trigger: ATTAAAGCAATGATGTCGCAATCTGGCCATGAATAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVAYFPV*VSIAPF
Trigger: GAAAGGTGCAATGCTTACCAACACTGGAAAATATGC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVAYFPV*VSIAPF
Trigger: GAAAGGTGCAATGCTTACCAACACTGGAAAATATGC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALAYFPV*VSIAPF
Trigger: GAAAGGTGCAATGCTTACCAACACTGGAAAATATGC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAATCAGTCATAATATCCTaGCAGATGAGACACAACAAT +
Preference number: 5 (lower is better)
Translates to: ALAKPLMLHGHNSQFCTKSVIIS*QMRHNN
Trigger: ATTGTTGTGTCTCATCTGCAAGGATATTATGACTGA...TTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTAGGAGAAACATCATTTaGATGACACGTCGGACATGT +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVRRNII*MTRRTC
Trigger: ACATGTCCGACGTGTCATCAAAATGATGTTTCTCCT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGAGGAGAAACATCATTTaGATGACACGTCGGACATGT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALRRNII*MTRRTC
Trigger: ACATGTCCGACGTGTCATCAAAATGATGTTTCTCCT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGAGGATCTTGTTGTCTaGATATCGGAGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVEDLVV*ISEISS
Trigger: TGATGAGATCTCCGATATCAAGACAACAAGATCCTC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGAGGATCTTGTTGTCTaGATATCGGAGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALEDLVV*ISEISS
Trigger: TGATGAGATCTCCGATATCAAGACAACAAGATCCTC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACTGATATGGATACTGTaGCAGTTATATCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQLIWIL*QLYQVQ
Trigger: CTGTACCTGATATAACTGCAACAGTATCCATATCAG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCCCTCTTCTAATTTGTaGTGGTGGAGAAACCAGATA +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALPSSNL*WWRNQI
Trigger: TATCTGGTTTCTCCACCACAACAAATTAGAAGAGGG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCCCTCTTCTAATTTGTaGTGGTGGAGAAACCAGATA +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVPSSNL*WWRNQI
Trigger: TATCTGGTTTCTCCACCACAACAAATTAGAAGAGGG...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCATGATACCCAAGGTGTaGATAAATTGGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLMIPKV*INWQEL
Trigger: CAGCTCCTGCCAATTTATCAACACCTTGGGTATCAT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGATTGTGACCATCTCTaGCTGAAAGCTTTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVDCDHL*LKAFLD
Trigger: ATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGATTGTGACCATCTCTaGCTGAAAGCTTTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVDCDHL*LKAFLD
Trigger: ATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTGGCATCATCTCTACTaGGGAGAACAAACAATGAGT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALWHHLY*GEQTMS
Trigger: ACTCATTGTTTGTTCTCCCAAGTAGAGATGATGCCA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCCATCATTCTTCCGTTaGGTTTTATCACCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCPSFFR*VLSPFA
Trigger: AGCAAAGGGTGATAAAACCAAACGGAAGAATGATGG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCCATCTACTTTTTCTaGGGGTCCTTTAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSIYFF*GSFSRF
Trigger: AAACCTGCTAAAGGACCCCAAGAAAAAGTAGATGGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATTCTCATTAGGCTTCTaGGCCTTTTCTTCCTTAGTT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQFSLGF*AFSSLV
Trigger: AACTAAGGAAGAAAAGGCCAAGAAGCCTAATGAGAA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCAGCTGGCGCGGTATaGTCATTATTATATTCTTCC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSAGAV*SLLYSS
Trigger: GGAAGAATATAATAATGACAATACCGCGCCAGCTGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCAGCTGGCGCGGTATaGTCATTATTATATTCTTCC +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCSAGAV*SLLYSS
Trigger: GGAAGAATATAATAATGACAATACCGCGCCAGCTGA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGCTCTACGTTTGGAACTaGAATACTCTCTGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLYVWN*NTLWCH
Trigger: ATGACACCAGAGAGTATTCAAGTTCCAAACGTAGAG...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTAACTGGGGTTTAGGCTaGACAGTACTCTTGTCAATT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCNWGLG*TVLLSI
Trigger: AATTGACAAGAGTACTGTCAAGCCTAAACCCCAGTT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS TCA 90 bp AGTAATCCATCACTAGTGCTTTCCCAAACAGAAGATACACATTGTTaGGCAGAAAATGCAAGCAATCTTATCGCAAAACATGGCATATAC +
Preference number: 5 (lower is better)
Translates to: SNPSLVLSQTEDTHC*AENASNLIAKHGIY
Trigger: GTATATGCCATGTTTTGCGATAAGATTGCTTGCATTTTCTGCTCAACAATGTGTATCTTCTGTTTGGGAAAGCACTAGTGATGGATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTATTCATGGCCAGATaGCGACATCATTGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVVFMAR*RHHCFN
Trigger: ATTAAAGCAATGATGTCGCAATCTGGCCATGAATAC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGTATTCATGGCCAGATaGCGACATCATTGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVVFMAR*RHHCFN
Trigger: ATTAAAGCAATGATGTCGCAATCTGGCCATGAATAC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTCTGATATGGATACTGTaGCAGTTATATCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVLIWIL*QLYQVQ
Trigger: CTGTACCTGATATAACTGCAACAGTATCCATATCAG...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTCTGATATGGATACTGTaGCAGTTATATCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCLIWIL*QLYQVQ
Trigger: CTGTACCTGATATAACTGCAACAGTATCCATATCAG...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTACGTTCTGTTTCCCCTaGAGGTACATTACGTTTATT +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVTFCFP*RYITFI
Trigger: AATAAACGTAATGTACCTCAAGGGGAAACAGAACGT...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAACACTCTCCTTCTCTTTaGACTTTGTATTATCCTTCT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQHSPSL*TLYYPS
Trigger: AGAAGGATAATACAAAGTCAAAAGAGAAGGAGAGTG...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGCATCATCTCTACTaGGGAGAACAAACAATGAGT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLWHHLY*GEQTMS
Trigger: ACTCATTGTTTGTTCTCCCAAGTAGAGATGATGCCA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATCACCCTTTGCTTTaGGTTTATCCCTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCYHPLL*VYPFLS
Trigger: AGAGAGAAAGGGATAAACCAAAAGCAAAGGGTGATA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTATCACCCTTTGCTTTaGGTTTATCCCTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALYHPLL*VYPFLS
Trigger: AGAGAGAAAGGGATAAACCAAAAGCAAAGGGTGATA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATGGTTTTATCACCCTTaGCTTTTGGTTTATCCCTTT +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQWFYHP*LLVYPF
Trigger: AAAGGGATAAACCAAAAGCAAAGGGTGATAAAACCA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTCTCATTAGGCTTCTaGGCCTTTTCTTCCTTAGTT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFSLGF*AFSSLV
Trigger: AACTAAGGAAGAAAAGGCCAAGAAGCCTAATGAGAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGTTCCATTTTGCGCTTaGGTGATGGTTTCACTATTT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALVPFCA*VMVSLF
Trigger: AAATAGTGAAACCATCACCAAAGCGCAAAATGGAAC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGTTCCATTTTGCGCTTaGGTGATGGTTTCACTATTT +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVVPFCA*VMVSLF
Trigger: AAATAGTGAAACCATCACCAAAGCGCAAAATGGAAC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCTCTACGTTTGGAACTaGAATACTCTCTGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLYVWN*NTLWCH
Trigger: ATGACACCAGAGAGTATTCAAGTTCCAAACGTAGAG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAATTTTCATCTCTACGTTaGGAACTTGAATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQFSSLR*ELEYSL
Trigger: CAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAA...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp TGGTGGTTAAAAATAATAGGCCCTAGCAAAACCTCTCATGTTACATGGTCACAAGTAGTTTATTGCCACTaGACTCTTTATTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: WWLKIIGPSKTSHVTWSQVVYCH*TLYCSL
Trigger: CAAGGAACAATAAAGAGTCAAGTGGCAATAAACTAC...TTGTGACCATGTAACATGAGAGGTTTTGCTAGGGCCTATTATTTTTAACCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGACAGATTTCACTTTTaGGTCATCTTTCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCDRFHF*VIFLLL
Trigger: GAGAAGGAGAAAGATGACCAAAAAGTGAAATCTGTC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGACAGATTTCACTTTTaGGTCATCTTTCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KPLMLHGHNSQFCTKVRVDRFHF*VIFLLL
Trigger: GAGAAGGAGAAAGATGACCAAAAAGTGAAATCTGTC...AACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGGACAGATTTCACTTTTaGGTCATCTTTCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALDRFHF*VIFLLL
Trigger: GAGAAGGAGAAAGATGACCAAAAAGTGAAATCTGTC...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS CCA 90 bp AAAGTCAACACTTCTCCCATAATATGCTTTCATGTCATATGGTGGTaGAACTTCTCTGTATCTATTAAAATATTCACGTTCTGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KVNTSPIICFHVIWW*NFSVSIKIFTFCFP
Trigger: GGGGAAACAGAACGTGAATATTTTAATAGATACAGAGAAGTTCCACCACCATATGACATGAAAGCATATTATGGGAGAAGTGTTGACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 90 bp CCATTTGGATTGAGGAACCTGAATCATAATGATAACATCTTCAGCTaGCGCGGTATTGTCATTATTATATTCTTCCATCGTTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: PFGLRNLNHNDNIFS*RGIVIIIFFHRFNH
Trigger: GTGATTAAAACGATGGAAGAATATAATAATGACAATACCGCGCCAGCTGAAGATGTTATCATTATGATTCAGGTTCCTCAATCCAAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTCAGTCATAATATCCTaGCAGATGAGACACAACAAT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALSVIIS*QMRHNN
Trigger: ATTGTTGTGTCTCATCTGCAAGGATATTATGACTGA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCACGTTCTGTTTCCCCTaGAGGTACATTACGTTTATT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLTFCFP*RYITFI
Trigger: AATAAACGTAATGTACCTCAAGGGGAAACAGAACGT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTTATCCCTTTCTCTCTaGTCTTTTTCAGACACTGAT +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALLSLSL*SFSDTD
Trigger: ATCAGTGTCTGAAAAAGACAAGAGAGAAAGGGATAA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTGGTTTTATCACCCTTaGCTTTTGGTTTATCCCTTT +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCWFYHP*LLVYPF
Trigger: AAAGGGATAAACCAAAAGCAAAGGGTGATAAAACCA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGACTTTTAACCTCATGTaGTATGATTTCATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALTFNLM*YDFMAH
Trigger: GTGAGCCATGAAATCATACAACATGAGGTTAAAAGT...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTACTTTTAACCTCATGTaGTATGATTTCATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCTFNLM*YDFMAH
Trigger: GTGAGCCATGAAATCATACAACATGAGGTTAAAAGT...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTTTTCATCTCTACGTTaGGAACTTGAATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCFSSLR*ELEYSL
Trigger: CAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAA...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp GTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTGTTTTCATCTCTACGTTaGGAACTTGAATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: VTWSQLTILYKSSCYKALFSSLR*ELEYSL
Trigger: CAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAA...CAGAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp AAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTGTAGTTTATTGCCACTaGACTCTTTATTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KTSHVTWSQLTILYKSSCVVYCH*TLYCSL
Trigger: CAAGGAACAATAAAGAGTCAAGTGGCAATAAACTAC...ACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp CTAGCAAAACCTCTCATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTGTAGTTTATTGCCACTaGACTCTTTATTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LAKPLMLHGHNSQFCTKVVVYCH*TLYCSL
Trigger: CAAGGAACAATAAAGAGTCAAGTGGCAATAAACTAC...AACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACATGAGAGGTTTTGCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS GCA 90 bp TGCATCTATAGTTGGTATTGCATATTTTCCAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATCTTTCACTTCCATCATGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: CIYSWYCIFSSVGKH*TFHIRIFHFHHETS
Trigger: AGAAGTTTCATGATGGAAGTGAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000562683.2
ENST00000564314.5
ENST00000567686.5
CDS GCA 90 bp AGCATCTATAGTTGGTATTGCATATTTTCCAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATCTTTCACTTCCATCATGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: SIYSWYCIFSSVGKH*TFHIRIFHFHHETS
Trigger: AGAAGTTTCATGATGGAAGTGAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS CCA 90 bp GTCTCTAAAGTCAACACTTCTCCCATAATATGCTTTCATGTCATATaGTGGTGGAACTTCTCTGTATCTATTAAAATATTCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VSKVNTSPIICFHVI*WWNFSVSIKIFTFC
Trigger: ACAGAACGTGAATATTTTAATAGATACAGAGAAGTTCCACCACCATATGACATGAAAGCATATTATGGGAGAAGTGTTGACTTTAGAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTCAGTCATAATATCCTaGCAGATGAGACACAACAAT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLSVIIS*QMRHNN
Trigger: ATTGTTGTGTCTCATCTGCAAGGATATTATGACTGA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCCACTCTCCTTCTCTTTaGACTTTGTATTATCCTTCT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLHSPSL*TLYYPS
Trigger: AGAAGGATAATACAAAGTCAAAAGAGAAGGAGAGTG...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCTTATCCCTTTCTCTCTaGTCTTTTTCAGACACTGAT +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLLSLSL*SFSDTD
Trigger: ATCAGTGTCTGAAAAAGACAAGAGAGAAAGGGATAA...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000348022.6
CDS-3UTR CAA 90 bp ATGTTACATGGTCACAACTCACAATTCTGTACAAAAGTTCGTGTTATAAAGCTCACTTTTAACCTCATGTaGTATGATTTCATGGCTCAC +
Preference number: 5 (lower is better)
Translates to: MLHGHNSQFCTKVRVIKLTFNLM*YDFMAH
Trigger: GTGAGCCATGAAATCATACAACATGAGGTTAAAAGT...GAGCTTTATAACACGAACTTTTGTACAGAATTGTGAGTTGTGACCATGTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
CDS CCA 72 bp AGGCCCGGAGTCCACGAGCGGCCTCACGCCTCCTCCTaGCTTCCGGACGACCGGCGTCAGCTTCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RPGVHERPHASS*LPDDRRQLPQA
Trigger: GGCCTGGGGAAGCTGACGCCGGTCGTCCGGAAGCCAGGAGGAGGCGTGAGGCCGCTCGTGGACTCCGGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS TCA 72 bp GCTTCGGCGGACCCCGGGGACACCGCCGAGGCTCCCTaGCGCTTCTTCTCGCCGGATCCTCCGCGCTTCGCT +
Preference number: 6 (lower is better)
Translates to: ASADPGDTAEAP*RFFSPDPPRFA
Trigger: AGCGAAGCGCGGAGGATCCGGCGAGAAGAAGCGTCAGGGAGCCTCGGCGGTGTCCCCGGGGTCCGCCGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS CCA 72 bp CACCGAGCGGCGGCGACACCTCCAAGCCAGGTACTATaGCGGACGCGGCCTGGCTTCGGACGAGCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: HRAAATPPSQVL*RTRPGFGRAPH
Trigger: GTGGGGCGCTCGTCCGAAGCCAGGCCGCGTCCGCCATAGTACCTGGCTTGGAGGTGTCGCCGCCGCTCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568015.5
CDS CCA 72 bp GGCCGCACCTCCCGGCGGGTCTCTCTCTCCGTGGATTaGGGTGACCCAGGCCCCGGGAGAAGGTTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: GRTSRRVSLSVD*GDPGPGRRLRG
Trigger: TCCCCTCAACCTTCTCCCGGGGCCTGGGTCACCCCAATCCACGGAGAGAGAGACCCGCCGGGAGGTGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS CAA 90 bp CTCGCCGGATCCTCCGCGCTTCGCTCGCCTTTCGTTTCCGTCGCCTaGAGGCCCGGAACCGCGAGAACACGCCCGCAAGCTGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: LAGSSALRSPFVSVA*RPGTARTRPQAAGQ
Trigger: CTGCCCAGCAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGCGAGCGAAGCGCGGAGGATCCGGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS TCA 72 bp CCTCCGCGCTTCGCTCGCCTTTCGTTTCCGTCGCCTTaGGGCCCGGAACCGCGAGAACACGCCCGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: PPRFARLSFPSP*GPEPREHARKL
Trigger: CAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGCGAGCGAAGCGCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS GCA 72 bp CTTGAGGCCCGGAACCGCGAGAACACGCCCGCAAGCTaGTGGGCAGCGGCTAGGGCTTCTCCGGCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: LEARNRENTPAS*WAAARASPAPF
Trigger: AAAGGGAGCCGGAGAAGCCCTAGCCGCTGCCCAGCAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319715.10
ENST00000568015.5
ENST00000568316.1
CDS CAA 72 bp TCCTCCGCGCTTCGCTCGCCTTTCGTTTCCGTCGCCTaGAGGCCCGGAACCGCGAGAACACGCCCGCAAGCT +
Preference number: 6 (lower is better)
Translates to: SSALRSPFVSVA*RPGTARTRPQA
Trigger: AGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGCGAGCGAAGCGCGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319715.10
ENST00000568316.1
CDS CCA 72 bp ATCGAGAATCCGCCAACGGGCACAATGTCACCCGGCTaGGTCCCCCTCGCTCATGCTAAGGGGCCGGCAGAG +
Preference number: 6 (lower is better)
Translates to: IENPPTGTMSPG*VPLAHAKGPAE
Trigger: CTCTGCCGGCCCCTTAGCATGAGCGAGGGGGACCCAGCCGGGTGACATTGTGCCCGTTGGCGGATTCTCGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319715.10
CDS TCA 72 bp CATGGTGCCAAGGGATTCCTTTCGTTTCCGTCGCCTTaGGGCCCGGAACCGCGAGAACACGCCCGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: HGAKGFLSFPSP*GPEPREHARKL
Trigger: CAGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGAATCCCTTGGCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568015.5
CDS TCA 72 bp CTATACCCAGCGGGTGGTGGCTGGCCAGGAGGAAACTaGGGAGAAAACTGTGGAGGAGGAACACCCGGAGGG +
Preference number: 6 (lower is better)
Translates to: LYPAGGGWPGGN*GENCGGGTPGG
Trigger: CCCTCCGGGTGTTCCTCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS CAA 72 bp ACATGGTGCCAAGGGATTCCTTTCGTTTCCGTCGCCTaGAGGCCCGGAACCGCGAGAACACGCCCGCAAGCT +
Preference number: 6 (lower is better)
Translates to: TWCQGIPFVSVA*RPGTARTRPQA
Trigger: AGCTTGCGGGCGTGTTCTCGCGGTTCCGGGCCTCAAGGCGACGGAAACGAAAGGAATCCCTTGGCACCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568015.5
CDS CCA 72 bp AGGAAACCCTGGAGGAGGGACACTATACCCAGCGGGTaGTGGCTGGCCAGGAGGAAACTGAGGAGAAAACTG +
Preference number: 6 (lower is better)
Translates to: RKPWRRDTIPSG*WLARRKLRRKL
Trigger: CAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCCGCTGGGTATAGTGTCCCTCCTCCAGGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS TCA 72 bp GGTACAAAGACTGGAGTTGCTGGTAGTGACGGGCCTTaGGTCCTCTGTGATCTTTCGCTGTGGTGTCGCCCA +
Preference number: 6 (lower is better)
Translates to: GTKTGVAGSDGP*VLCDLSLWCRP
Trigger: TGGGCGACACCACAGCGAAAGATCACAGAGGACTCAAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS TCA 72 bp AAATTGCAAGCCGTCATGGAATTCACTCCGAAGCGGTaGATCTGTTCCTTTTGCCCGTCTGTGGCCGACCCC +
Preference number: 6 (lower is better)
Translates to: KLQAVMEFTPKR*ICSFCPSVADP
Trigger: GGGGTCGGCCACAGACGGGCAAAAGGAACAGATTCACCGCTTCGGAGTGAATTCCATGACGGCTTGCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564314.5
ENST00000567686.5
CDS CAA 90 bp GAGGCGGATACAAAGGAGGTGGTGGAACAGGTACAAAGACTGGAGTaGCTGGTAGTGACGGGCCTTGAGTCCTCTGTGATCTTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: EADTKEVVEQVQRLE*LVVTGLESSVIFRC
Trigger: ACAGCGAAAGATCACAGAGGACTCAAGGCCCGTCACTACCAGCAACTCCAGTCTTTGTACCTGTTCCACCACCTCCTTTGTATCCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000570185.1
ENST00000646282.1
CDS CCA 72 bp GTGAACGGTAATTGCGGCTCTTGCCTCTGCCTCTTCTaGGGTATGGAGGTGACCGTGAATAGGAACGAGAAT +
Preference number: 6 (lower is better)
Translates to: VNGNCGSCLCLF*GMEVTVNRNEN
Trigger: ATTCTCGTTCCTATTCACGGTCACCTCCATACCCCAGAAGAGGCAGAGGCAAGAGCCGCAATTACCGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp GATATCGGAGATCTCATCAGAGGTTGTAGGTTCCTCTaGATCAGTGGTCTCGGAGGTGGTATTGGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: DIGDLIRGCRFL*ISGLGGGIGGG
Trigger: ACCACCCCCAATACCACCTCCGAGACCACTGATTCAGAGGAACCTACAACCTCTGATGAGATCTCCGATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp CTTTTTCTTCTTCTTCTTGCTGTCCTGACTTTCTGCTaGGCTGGCACTGCTACTGTGGCTTCGGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LFLLLLAVLTFC*AGTATVASGLA
Trigger: AGCCAGACCCGAAGCCACAGTAGCAGTGCCAGCTCAGCAGAAAGTCAGGACAGCAAGAAGAAGAAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
CDS CCA 72 bp TTTGTTGTGGTGGAGAAACCAGATAGCCAAGTTTGTTaGAATGTTCCCAGCCTGGTCGACCACCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: FVVVEKPDSQVC*NVPSLVDHHLD
Trigger: GTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAACTTGGCTATCTGGTTTCTCCACCACAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS GCA 72 bp TCAGTATATTCTTCTTTCGTCTGCGCATTGGTGATCTaGAGGTCGCAGTCGGCAGCTTTCAGCTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SVYSSFVCALVI*RSQSAAFSFSL
Trigger: GAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAATGCGCAGACGAAAGAAGAATATACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000452655.6
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS CCA 72 bp TATGGATACTGTTGCAGTTATATCAGGTACAGGAGCTaGAGCAGAAGACGGATTTCCAGACACAGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: YGYCCSYIRYRS*SRRRISRHRRG
Trigger: GCCCCTCCTGTGTCTGGAAATCCGTCTTCTGCTCCAGCTCCTGTACCTGATATAACTGCAACAGTATCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp CTCCAGTTGAGCTCGTACTGGTGTAATCCACCAGAGTaGAGCTGGATCCTTCAGTTCCAGTCACTTTTCGTC +
Preference number: 6 (lower is better)
Translates to: LQLSSYWCNPPE*SWILQFQSLFV
Trigger: GACGAAAAGTGACTGGAACTGAAGGATCCAGCTCAACTCTGGTGGATTACACCAGTACGAGCTCAACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000646282.1
CDS TCA 72 bp GAGGTGACCGTGAATAGGAACGAGAATGTGAGCGGCTaGATGATCGAGAATAAGAGCGTGAACGTGTTGAAC +
Preference number: 6 (lower is better)
Translates to: EVTVNRNENVSG*MIENKSVNVLN
Trigger: GTTCAACACGTTCACGCTCTTATTCTCGATCATTCAGCCGCTCACATTCTCGTTCCTATTCACGGTCACCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp TTTGTTGGAATGTTCCCAGCCTGGTCGACCACCACCTaGACGAGCAGTATTTATTCTTACTGGACCAGTTGT +
Preference number: 6 (lower is better)
Translates to: FVGMFPAWSTTT*TSSIYSYWTSC
Trigger: ACAACTGGTCCAGTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp AACCAGATAGCCAAGTTTGTTGGAATGTTCCCAGCCTaGTCGACCACCACCTGGACGAGCAGTATTTATTCT +
Preference number: 6 (lower is better)
Translates to: NQIAKFVGMFPA*STTTWTSSIYS
Trigger: AGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACATTCCAACAAACTTGGCTATCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp GCATTATCATCAGTATATTCTTCTTTCGTCTGCGCATaGGTGATCTGCAGGTCGCAGTCGGCAGCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: ALSSVYSSFVCA*VICRSQSAAFS
Trigger: GCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAATGCGCAGACGAAAGAAGAATATACTGATGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000452655.6
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS CAA 72 bp CATGGAATTCACTCCGAAGCGGTGAATCTGTTCCTTTaGCCCGTCTGTGGCCGACCCCTTTATATACTGAAT +
Preference number: 6 (lower is better)
Translates to: HGIHSEAVNLFL*PVCGRPLYILN
Trigger: ATTCAGTATATAAAGGGGTCGGCCACAGACGGGCAAAAGGAACAGATTCACCGCTTCGGAGTGAATTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564314.5
ENST00000567686.5
CDS CAA 90 bp GCTCTCTATAGAATTCTTCCCTGGACAAAGGTGGTGCTTGTGTTGTaGGGATGGTATTTGAATGAGCTGTCTGCACTCCTGATGATACCC +
Preference number: 6 (lower is better)
Translates to: ALYRILPWTKVVLVL*GWYLNELSALLMIP
Trigger: GGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATAGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp TATCATCAGTATATTCTTCTTTCGTCTGCGCATTGGTaGTCTGCAGGTCGCAGTCGGCAGCTTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: YHQYILLSSAHW*SAGRSRQLSAS
Trigger: AGAAGCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAATGCGCAGACGAAAGAAGAATATACTGATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000452655.6
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS CCA 72 bp CTTCCCTGGACAAAGGTGGTGCTTGTGTTGTTGGGATaGTATTTGAATGAGCTGTCTGCACTCCTGATGATA +
Preference number: 6 (lower is better)
Translates to: LPWTKVVLVLLG*YLNELSALLMI
Trigger: TATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp GTTTATACTTTGTTCCCAGCCTGGTCGACCACCACCTaGACGAGCAGTATTTATTCTTACTGGACCAGTTGT +
Preference number: 6 (lower is better)
Translates to: VYTLFPAWSTTT*TSSIYSYWTSC
Trigger: ACAACTGGTCCAGTAAGAATAAATACTGCTCGTCCAGGTGGTGGTCGACCAGGCTGGGAACAAAGTATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570185.1
CDS CAA 90 bp CCCACGGTTTATACTTCTGTAGCAGCTCCTCTCCCCTCTTCTAATTaGTTGTGGTGGAGAAACCAGATAGCCAAGTTTGTTGGAATGTTC +
Preference number: 6 (lower is better)
Translates to: PTVYTSVAAPLPSSN*LWWRNQIAKFVGMF
Trigger: GAACATTCCAACAAACTTGGCTATCTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTACAGAAGTATAAACCGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 90 bp ATTCTTCCCTGGACAAAGGTGGTGCTTGTGTTGTTGGGATGGTATTaGAATGAGCTGTCTGCACTCCTGATGATACCCAAGGTGTTGATA +
Preference number: 6 (lower is better)
Translates to: ILPWTKVVLVLLGWY*NELSALLMIPKVLI
Trigger: TATCAACACCTTGGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 90 bp GCTGCTCTCTATAGAATTCTTCCCTGGACAAAGGTGGTGCTTGTGTaGTTGGGATGGTATTTGAATGAGCTGTCTGCACTCCTGATGATA +
Preference number: 6 (lower is better)
Translates to: AALYRILPWTKVVLV*LGWYLNELSALLMI
Trigger: TATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATAGAGAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 90 bp AAGCTTTTCTGGATAGTTGCTACCTATGTTTCGACTTCTATGACTTaGCCCACCAACATAGTCTTCTCTGCGGCCTCTTGTGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: KLFWIVATYVSTSMT*PTNIVFSAASCEGR
Trigger: TCTCCCTTCACAAGAGGCCGCAGAGAAGACTATGTTGGTGGGCAAAGTCATAGAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp AAAGGTGGTGCTTGTGTTGTTGGGATGGTATTTGAATaGGCTGTCTGCACTCCTGATGATACCCAAGGTGTT +
Preference number: 6 (lower is better)
Translates to: KGGACVVGMVFE*AVCTPDDTQGV
Trigger: AACACCTTGGGTATCATCAGGAGTGCAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS GCA 72 bp AGAGCGGTAATTGCAATTGAGGAGGTTCCCTTTGAGTaGTCTGATGCAAGAGCTGCAGCTGGCAATATTTTA +
Preference number: 6 (lower is better)
Translates to: RAVIAIEEVPFE*SDARAAAGNIL
Trigger: TAAAATATTGCCAGCTGCAGCTCTTGCATCAGAGCACTCAAAGGGAACCTCCTCAATTGCAATTACCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp GTAGCAGCTCCTCTCCCCTCTTCTAATTTGTTGTGGTaGAGAAACCAGATAGCCAAGTTTGTTGGAATGTTC +
Preference number: 6 (lower is better)
Translates to: VAAPLPSSNLLW*RNQIAKFVGMF
Trigger: GAACATTCCAACAAACTTGGCTATCTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp TCTGTAGCAGCTCCTCTCCCCTCTTCTAATTTGTTGTaGTGGAGAAACCAGATAGCCAAGTTTGTTGGAATG +
Preference number: 6 (lower is better)
Translates to: SVAAPLPSSNLL*WRNQIAKFVGM
Trigger: CATTCCAACAAACTTGGCTATCTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp ACTTCTGTAGCAGCTCCTCTCCCCTCTTCTAATTTGTaGTGGTGGAGAAACCAGATAGCCAAGTTTGTTGGA +
Preference number: 6 (lower is better)
Translates to: TSVAAPLPSSNL*WWRNQIAKFVG
Trigger: TCCAACAAACTTGGCTATCTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTACAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp TGGATAGTTGCTACCTATGTTTCGACTTCTATGACTTaGCCCACCAACATAGTCTTCTCTGCGGCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: WIVATYVSTSMT*PTNIVFSAASC
Trigger: ACAAGAGGCCGCAGAGAAGACTATGTTGGTGGGCAAAGTCATAGAAGTCGAAACATAGGTAGCAACTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 90 bp CCAGATTGCGACATCATTGCTTTAATTTTATCTTCTTCAGAAGCATaGGCTTCAGCCAGATTGGCAGTCTTTGTAAGCTGGGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PDCDIIALILSSSEA*ASARLAVFVSWARE
Trigger: TTCTCTGGCCCAGCTTACAAAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGATAAAATTAAAGCAATGATGTCGCAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000564314.5
ENST00000564726.5
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS GCA 72 bp TGTGACCATCTCTTGCTGAAAGCTTTTCTGGATAGTTaGTACCTATGTTTCGACTTCTATGACTTTGCCCAC +
Preference number: 6 (lower is better)
Translates to: CDHLLLKAFLDS*YLCFDFYDFAH
Trigger: GTGGGCAAAGTCATAGAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp TATACTTCTGTAGCAGCTCCTCTCCCCTCTTCTAATTaGTTGTGGTGGAGAAACCAGATAGCCAAGTTTGTT +
Preference number: 6 (lower is better)
Translates to: YTSVAAPLPSSN*LWWRNQIAKFV
Trigger: AACAAACTTGGCTATCTGGTTTCTCCACCACAACAAATTAGAAGAGGGGAGAGGAGCTGCTACAGAAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 90 bp CTGTTTCCACAGCAGGGAATCACAACAGCATCAGTCATAATATCCTaGCAGATGAGACACAACAATTCATCTGGGATAGGATCATCTTCT +
Preference number: 6 (lower is better)
Translates to: LFPQQGITTASVIIS*QMRHNNSSGIGSSS
Trigger: AGAAGATGATCCTATCCCAGATGAATTGTTGTGTCTCATCTGCAAGGATATTATGACTGATGCTGTTGTGATTCCCTGCTGTGGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000562683.2
ENST00000564314.5
ENST00000567686.5
ENST00000646282.1
CDS CAA 90 bp AGTTGCTCCATAGACATCACCACGATTCCAGAAATAAGTATCAATTaGCTTATGCCCCATTGTTCCCAATTTGTGAAAGAGGAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SCSIDITTIPEISIN*LMPHCSQFVKEESP
Trigger: GGGAGACTCCTCTTTCACAAATTGGGAACAATGGGGCATAAGCAAATTGATACTTATTTCTGGAATCGTGGTGATGTCTATGGAGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS TCA 72 bp TGTATGATTTCATGGCTCACGTCCTTGGTGAATTTCTaGATTTTCTCGGATGGCTCACTTTCTTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: CMISWLTSLVNF*IFSDGSLSFSG
Trigger: TCCTGAGAAAGAAAGTGAGCCATCCGAGAAAATTCAGAAATTCACCAAGGACGTGAGCCATGAAATCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS TCA 72 bp TTAGGTAATTACATGATGTTTAGGTGTCTGCAAGGCTaGAGAAAGTCATTCTGGGGGCACTCAAACCTTAGA +
Preference number: 6 (lower is better)
Translates to: LGNYMMFRCLQG*RKSFWGHSNLR
Trigger: TCTAAGGTTTGAGTGCCCCCAGAATGACTTTCTTCAGCCTTGCAGACACCTAAACATCATGTAATTACCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS TCA 72 bp AATGTATCACACAGAAAATCTGTTCAGAGTGTCGACTaGATACTAGGAGTCCCATATCTCCCTATGGTCTCT +
Preference number: 6 (lower is better)
Translates to: NVSHRKSVQSVD*ILGVPYLPMVS
Trigger: AGAGACCATAGGGAGATATGGGACTCCTAGTATTCAGTCGACACTCTGAACAGATTTTCTGTGTGATACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS CAA 90 bp CTTATCGCAAAACATGGCATATACAGTGATTCAGGAGGTAACAATTaGCCCCTCTGCCAAACATACACATTGGTATATTCCTGCAAACAG +
Preference number: 6 (lower is better)
Translates to: LIAKHGIYSDSGGNN*PLCQTYTLVYSCKQ
Trigger: CTGTTTGCAGGAATATACCAATGTGTATGTTTGGCAGAGGGGCAAATTGTTACCTCCTGAATCACTGTATATGCCATGTTTTGCGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS CAA 90 bp CGTTCTAGCCTCTTTGGAAGATTGAGACAGACTTTTAAAATTTCCTaGTTCATTCAGACGGTCCAAATTACTCTCTTTCTCTGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: RSSLFGRLRQTFKIS*FIQTVQITLFLWLS
Trigger: ACTCAGCCAGAGAAAGAGAGTAATTTGGACCGTCTGAATGAACAAGGAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAGGCTAGAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS CAA 90 bp AGGAGTCTCCCAGCATCTATAGTTGGTATTGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTCATATTAGGATCTTTCACTTCCATC +
Preference number: 6 (lower is better)
Translates to: RSLPASIVGIAYFPV*VSIAPFILGSFTSI
Trigger: GATGGAAGTGAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCTGGGAGACTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS TCA 72 bp GTATCAATTTGCTTATGCCCCATTGTTCCCAATTTGTaGAAGAGGAGTCTCCCAGCATCTATAGTTGGTATT +
Preference number: 6 (lower is better)
Translates to: VSICLCPIVPNL*KRSLPASIVGI
Trigger: AATACCAACTATAGATGCTGGGAGACTCCTCTTTCACAAATTGGGAACAATGGGGCATAAGCAAATTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS GCA 72 bp ATATACAGTGATTCAGGAGGTAACAATTTGCCCCTCTaGCAAACATACACATTGGTATATTCCTGCAAACAG +
Preference number: 6 (lower is better)
Translates to: IYSDSGGNNLPL*QTYTLVYSCKQ
Trigger: CTGTTTGCAGGAATATACCAATGTGTATGTTTGGCAGAGGGGCAAATTGTTACCTCCTGAATCACTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS GCA 72 bp AACATGGCATATACAGTGATTCAGGAGGTAACAATTTaGCCCTCTGCCAAACATACACATTGGTATATTCCT +
Preference number: 6 (lower is better)
Translates to: NMAYTVIQEVTI*PSAKHTHWYIP
Trigger: AGGAATATACCAATGTGTATGTTTGGCAGAGGGGCAAATTGTTACCTCCTGAATCACTGTATATGCCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613729.1
CDS CCA 72 bp GGAAGAGTCATCAATTGCTTTTGTAGTTGCCATCGCTaGTTCAGTTCGACTTATAACATATGTCTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: GRVINCFCSCHR*FSSTYNICLAC
Trigger: ACAAGCAAGACATATGTTATAAGTCGAACTGAACCAGCGATGGCAACTACAAAAGCAATTGATGACTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000567686.5
ENST00000568015.5
ENST00000646282.1
CDS CAA 72 bp AGGCATTTAGCACTCATATCAGCCATTCATTGGGGTTaGTCTTTACATTCATCCACAAAACAAGCAACCAGT +
Preference number: 6 (lower is better)
Translates to: RHLALISAIHWG*SLHSSTKQATS
Trigger: ACTGGTTGCTTGTTTTGTGGATGAATGTAAAGACAAACCCCAATGAATGGCTGATATGAGTGCTAAATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS CAA 72 bp AAGTCATTCTGGGGGCACTCAAACCTTAGACCCTGTTaGTACCTTACATTAAGACTTGCATACTACTTTTCT +
Preference number: 6 (lower is better)
Translates to: KSFWGHSNLRPC*YLTLRLAYYFS
Trigger: AGAAAAGTAGTATGCAAGTCTTAATGTAAGGTACAAACAGGGTCTAAGGTTTGAGTGCCCCCAGAATGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS CAA 72 bp GATTCCAGAAATAAGTATCAATTTGCTTATGCCCCATaGTTCCCAATTTGTGAAAGAGGAGTCTCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: DSRNKYQFAYAP*FPICERGVSQH
Trigger: ATGCTGGGAGACTCCTCTTTCACAAATTGGGAACAATGGGGCATAAGCAAATTGATACTTATTTCTGGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS CAA 90 bp CCTTCTCTTTTGACTTTGTATTATCCTTCTGATTGTGACCATCTCTaGCTGAAAGCTTTTCTGGATAGTTGCTACCTATGTTTCGACTTC +
Preference number: 6 (lower is better)
Translates to: PSLLTLYYPSDCDHL*LKAFLDSCYLCFDF
Trigger: GAAGTCGAAACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATCAGAAGGATAATACAAAGTCAAAAGAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp CTTTGTATTATCCTTCTGATTGTGACCATCTCTTGCTaGAAGCTTTTCTGGATAGTTGCTACCTATGTTTCG +
Preference number: 6 (lower is better)
Translates to: LCIILLIVTISC*KLFWIVATYVS
Trigger: CGAAACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATCAGAAGGATAATACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS TCA 72 bp GAGCTCGTACGAAAAGGTCCATCTGATTTTTCTGAATaGACTGATATGGATACTGTTGCAGTTATATCAGGT +
Preference number: 6 (lower is better)
Translates to: ELVRKGPSDFSE*TDMDTVAVISG
Trigger: ACCTGATATAACTGCAACAGTATCCATATCAGTTCATTCAGAAAAATCAGATGGACCTTTTCGTACGAGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381039.7
CDS CAA 72 bp AATCTTCAGGCATTTAGCACTCATATCAGCCATTCATaGGGGTTTGTCTTTACATTCATCCACAAAACAAGC +
Preference number: 6 (lower is better)
Translates to: NLQAFSTHISHS*GFVFTFIHKTS
Trigger: GCTTGTTTTGTGGATGAATGTAAAGACAAACCCCAATGAATGGCTGATATGAGTGCTAAATGCCTGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS CAA 90 bp GTTAAGTTGAATCTTCAGGCATTTAGCACTCATATCAGCCATTCATaGGGGTTTGTCTTTACATTCATCCACAAAACAAGCAACCAGTTT +
Preference number: 6 (lower is better)
Translates to: VKLNLQAFSTHISHS*GFVFTFIHKTSNQF
Trigger: AAACTGGTTGCTTGTTTTGTGGATGAATGTAAAGACAAACCCCAATGAATGGCTGATATGAGTGCTAAATGCCTGAAGATTCAACTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS CAA 90 bp CCAGATTGCGACATCATTGCTTTAATTTTATCTTCTTCAGAAGCATaGGCTTCAGCCAGATTGGCAGTCTGTTTAACAGGTAATTATTTG +
Preference number: 6 (lower is better)
Translates to: PDCDIIALILSSSEA*ASARLAVCLTGNYL
Trigger: CAAATAATTACCTGTTAAACAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGATAAAATTAAAGCAATGATGTCGCAATCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562430.5
CDS TCA 72 bp TCAGAATCCCGAAAAGGTCCATCTGATTTTTCTGAATaGACTGATATGGATACTGTTGCAGTTATATCAGGT +
Preference number: 6 (lower is better)
Translates to: SESRKGPSDFSE*TDMDTVAVISG
Trigger: ACCTGATATAACTGCAACAGTATCCATATCAGTTCATTCAGAAAAATCAGATGGACCTTTTCGGGATTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp TTGAGGAACCTGAATCATAATGATAACATCTTCAGCTaGCGCGGTATTGTCATTATTATATTCTTCCATCGT +
Preference number: 6 (lower is better)
Translates to: LRNLNHNDNIFS*RGIVIIIFFHR
Trigger: ACGATGGAAGAATATAATAATGACAATACCGCGCCAGCTGAAGATGTTATCATTATGATTCAGGTTCCTCAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS CCA 72 bp TGTGTTTTTACATACTGCTTTTGTAGTTGCCATCGCTaGTTCAGTTCGACTTATAACATATGTCTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: CVFTYCFCSCHR*FSSTYNICLAC
Trigger: ACAAGCAAGACATATGTTATAAGTCGAACTGAACCAGCGATGGCAACTACAAAAGCAGTATGTAAAAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452655.6
CDS CAA 72 bp TTGACTTTGTATTATCCTTCTGATTGTGACCATCTCTaGCTGAAAGCTTTTCTGGATAGTTGCTACCTATGT +
Preference number: 6 (lower is better)
Translates to: LTLYYPSDCDHL*LKAFLDSCYLC
Trigger: ACATAGGTAGCAACTATCCAGAAAAGCTTTCAGCAAGAGATGGTCACAATCAGAAGGATAATACAAAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CAA 72 bp CCAGCATCTATAGTTGGTATTGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTCATATTAGGATCTTTC +
Preference number: 6 (lower is better)
Translates to: PASIVGIAYFPV*VSIAPFILGSF
Trigger: GAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS CAA 72 bp ATAGACATCACCACGATTCCAGAAATAAGTATCAATTaGCTTATGCCCCATTGTTCCCAATTTGTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: IDITTIPEISIN*LMPHCSQFVKE
Trigger: CTCTTTCACAAATTGGGAACAATGGGGCATAAGCAAATTGATACTTATTTCTGGAATCGTGGTGATGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646282.1
CDS GCA 72 bp AGTTGGTATTGCATATTTTCCAGTGTTGGTAAGCATTaGACCTTTCATATTAGGATCTTTCACTTCCATCAT +
Preference number: 6 (lower is better)
Translates to: SWYCIFSSVGKH*TFHIRIFHFHH
Trigger: ATGATGGAAGTGAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000562683.2
ENST00000564314.5
ENST00000567686.5
ENST00000646282.1
CDS CAA 72 bp TCTGCATCTATAGTTGGTATTGCATATTTTCCAGTGTaGGTAAGCATTGCACCTTTCATATTAGGATCTTTC +
Preference number: 6 (lower is better)
Translates to: SASIVGIAYFPV*VSIAPFILGSF
Trigger: GAAAGATCCTAATATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000562683.2
ENST00000564314.5
ENST00000567686.5
CDS CAA 72 bp CTCTTTGGAAGATTGAGACAGACTTTTAAAATTTCCTaGTTCATTCAGACGGTCCAAATTACTCTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: LFGRLRQTFKIS*FIQTVQITLFL
Trigger: GAGAAAGAGAGTAATTTGGACCGTCTGAATGAACAAGGAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1
CDS CCA 72 bp AACACTTCTCCCATAATATGCTTTCATGTCATATGGTaGTGGAACTTCTCTGTATCTATTAAAATATTCACG +
Preference number: 6 (lower is better)
Translates to: NTSPIICFHVIW*WNFSVSIKIFT
Trigger: CGTGAATATTTTAATAGATACAGAGAAGTTCCACCACCATATGACATGAAAGCATATTATGGGAGAAGTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000562430.5
ENST00000564314.5
ENST00000646282.1
CDS CCA 72 bp TTCGTCTTGTTAATTCATTCTTTTCATCTCTACGTTTaGAACTTGAATACTCTCTGGTGTCATAGTCAGTTT +
Preference number: 6 (lower is better)
Translates to: FVLLIHSFHLYV*NLNTLWCHSQF
Trigger: AAACTGACTATGACACCAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAAGAATGAATTAACAAGACGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319715.10
ENST00000348022.6
ENST00000381039.7
ENST00000562430.5
ENST00000646282.1