RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBBP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000117222

Ensembl transcript IDs: ENST00000264515.11, ENST00000367164.1, ENST00000484379.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATGCACAGGCAGAGGAAACCAAGCTACTTCACACGTGGAAAGATaGCAGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: KCTGRGNQATSHVER*QKPSKSHSLHTAAV
Trigger: CACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGAAGTAGCTTGGTTTCCTCTGCCTGTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR GCA 90 bp CTTCACACGTGGAAAGATGGCAGAAACCCTCTAAGTCCCATAGTTTaGACACTGCTGCAGTGTACAGTGCAGAGGACTGGAATGGATATA +
Preference number: 1 (lower is better)
Translates to: LHTWKDGRNPLSPIV*TLLQCTVQRTGMDI
Trigger: TATATCCATTCCAGTCCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CCA 90 bp AAACATCCAAATGCACAGGCAGAGGAAACCAAGCTACTTCACACGTaGAAAGATGGCAGAAACCCTCTAAGTCCCATAGTTTGCACACTG +
Preference number: 1 (lower is better)
Translates to: KHPNAQAEETKLLHT*KDGRNPLSPIVCTL
Trigger: CAGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGAAGTAGCTTGGTTTCCTCTGCCTGTGCATTTGGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR TCA 90 bp TCAAAGACATGCATTGAGGACCGAAGGCAAATGGGAGATAGGAAATaGCATGTCAAAATGACGCTGGGTACAATGAAGTTAGATGAGCAA +
Preference number: 1 (lower is better)
Translates to: SKTCIEDRRQMGDRK*HVKMTLGTMKLDEQ
Trigger: TTGCTCATCTAACTTCATTGTACCCAGCGTCATTTTGACATGTCATTTCCTATCTCCCATTTGCCTTCGGTCCTCAATGCATGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR TCA 90 bp TCAGGGAGAGCTCTTTCTTCAACTACTGAATATACTGGTTTTAAATaGTGGAGTGAGACAAAGAGGCTCTTGCTGACGTGCTCTACTTTG +
Preference number: 1 (lower is better)
Translates to: SGRALSSTTEYTGFK*WSETKRLLLTCSTL
Trigger: CAAAGTAGAGCACGTCAGCAAGAGCCTCTTTGTCTCACTCCATCATTTAAAACCAGTATATTCAGTAGTTGAAGAAAGAGCTCTCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACTCCTGACCTCGGGTaGTCAACCCGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTPDLG*STRLGL
Trigger: GAGGCCAAGGCGGGTTGATCACCCGAGGTCAGGAGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTGGTCTTGAACTCCTaGCCTCGGGTGATCAACCCG +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLVLNS*PRVINP
Trigger: CGGGTTGATCACCCGAGGTCAGGAGTTCAAGACCAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACTCAGAGAAGCTACTaGGCCCTTTTCACACCTGGT +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTQRSY*ALFTPG
Trigger: ACCAGGTGTGAAAAGGGCTCAGTAGCTTCTCTGAGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACTCCCACCTCCTGGGTaGGAGGCACAGGCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLPPPG*EAQAFV
Trigger: AACAAAGGCCTGTGCCTCCCACCCAGGAGGTGGGAG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCAATTTTCAAATGACTaGCCACAGTGTCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRQFSND*PQCPEA
Trigger: GGCCTCTGGACACTGTGGTCAGTCATTTGAAAATTG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTACAGCCCAGCTTCTTaGGCAAAACGTGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRYSPAS*AKRGMR
Trigger: TCTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAGCCTCCAGTGTAGCTaGGATTACAGGCATGTACTA +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRSLQCS*DYRHVL
Trigger: TAGTACATGCCTGTAATCCCAGCTACACTGGAGGCT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CAA 90 bp ACTTCACACGTGGAAAGATGGCAGAAACCCTCTAAGTCCCATAGTTaGCACACTGCTGCAGTGTACAGTGCAGAGGACTGGAATGGATAT +
Preference number: 2 (lower is better)
Translates to: TSHVERWQKPSKSHS*HTAAVYSAEDWNGY
Trigger: ATATCCATTCCAGTCCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTCTTGAGCAAAACGTaGTATGAGAGGAAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFLSKT*YERKRG
Trigger: CCCTCTCTTCCTCTCATACCACGTTTTGCTCAAGAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTGTTGAGAGACACCTaGGTTTGTTTCCATCTCTGG +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLLRDT*VCFHLW
Trigger: CCAGAGATGGAAACAAACCCAGGTGTCTCTCAACAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGAGGGAAACATGCAATaGGAGGAAAACAAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQREGNMQ*EENKGK
Trigger: TTTTCCCTTGTTTTCCTCTCATTGCATGTTTCCCTC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTCCCACCTCCTGGGTaGGAGGCACAGGCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLPPPG*EAQAFV
Trigger: AACAAAGGCCTGTGCCTCCCACCCAGGAGGTGGGAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGGTAATCAATGTGTTTaGCTACCTATAGGAGCATCC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRGNQCV*LPIGAS
Trigger: GGATGCTCCTATAGGTAGCCAAACACATTGATTACC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATGTGGTTGCTGCTTTaGTTCTGGATGGTTTTACTT +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRMWLLL*FWMVLL
Trigger: AAGTAAAACCATCCAGAATCAAAGCAGCAACCACAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATTCACCTTGATCTTTaGTTTGAACTATGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRIHLDL*FELCGC
Trigger: GCAACCACATAGTTCAAATCAAAGATCAAGGTGAAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTGCTTTGATTCTGGATaGTTTTACTTTACTCCTTGC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRCFDSG*FYFTPC
Trigger: GCAAGGAGTAAAGTAAAACCATCCAGAATCAAAGCA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAGCAAAACGTGGTATaGGAGGAAGAGAGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFEQNVV*EEERAF
Trigger: GAAGGCCCTCTCTTCCTCTCATACCACGTTTTGCTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATTCTTTGCTGGAGATaGATAAAACTAGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRILCWR*IKLAIF
Trigger: GAAGATAGCTAGTTTTATCCATCTCCAGCAAAGAAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTCAAAGACATGCATTaGGGACCGAAGGCAAATGGG +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLKDMH*GPKANG
Trigger: CCCATTTGCCTTCGGTCCTCAATGCATGTCTTTGAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACACATGATGGCAAAGTaGGAAAGAATGAAGAACTTC +
Preference number: 2 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPHMMAK*ERMKNF
Trigger: GAAGTTCTTCATTCTTTCTCACTTTGCCATCATGTG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCAATTTTCAAATGACTaGCCACAGTGTCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFQFSND*PQCPEA
Trigger: GGCCTCTGGACACTGTGGTCAGTCATTTGAAAATTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTACAGCCCAGCTTCTTaGGCAAAACGTGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFYSPAS*AKRGMR
Trigger: TCTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAACAAGGGAAAACCCTaGATTGTTACAGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFNKGKP*IVTAQL
Trigger: AAGCTGGGCTGTAACAATTCAGGGTTTTCCCTTGTT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAGTCACTCAAAGACATaGATTGAGGACCGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSHSKT*IEDRRQ
Trigger: TTGCCTTCGGTCCTCAATGCATGTCTTTGAGTGACT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGTTTGTTTCCATCTCTaGAAGCCAGCACAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFVCFHL*KPAQVK
Trigger: CTTTACCTGTGCTGGCTTCCAGAGATGGAAACAAAC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTATGGGAGATAGGAAATaGCATGTCAAAATGACGCTG +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFMGDRK*HVKMTL
Trigger: CAGCGTCATTTTGACATGTCATTTCCTATCTCCCAT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGTCTATTTGGACTTATaGTTGAAAGGGAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFVYLDL*LKGKGR
Trigger: CCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAATATAGGAGGTATCTaGGGAGAGGAGAAGTTTAAA +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFNIGGI*GEEKFK
Trigger: TTTAAACTTCTCCTCTCCCCAGATACCTCCTATATT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACAATGAACCAATATTaGAGGGAAACATGCAATGAG +
Preference number: 2 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTMNQY*RETCNE
Trigger: CTCATTGCATGTTTCCCTCCAATATTGGTTCATTGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGAGACAAAGAGGCTCTaGCTGACGTGCTCTACTTTG +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRETKRL*LTCSTL
Trigger: CAAAGTAGAGCACGTCAGCAAGAGCCTCTTTGTCTC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CCA 72 bp CCTGAATTGTTACAGCCCAGCTTCTTGAGCAAAACGTaGTATGAGAGGAAGAGAGGGCCTTCGTTGTTCCCT +
Preference number: 3 (lower is better)
Translates to: PELLQPSFLSKT*YERKRGPSLFP
Trigger: AGGGAACAACGAAGGCCCTCTCTTCCTCTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTAACAATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACTCAAAGACATGCATaGAGGACCGAAGGCAAATGG +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTQRHA*RTEGKW
Trigger: CCATTTGCCTTCGGTCCTCAATGCATGTCTTTGAGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTACAGCCCAGCTTCTaGAGCAAAACGTGGTATGAG +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLQPSF*SKTWYE
Trigger: CTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGTTTTACTTTACTCCTaGCATAGATTCCCCCACCCC +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRVLLYS*HRFPHP
Trigger: GGGGTGGGGGAATCTATGCAAGGAGTAAAGTAAAAC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR TCA 72 bp ATTGTTACAGCCCAGCTTCTTGAGCAAAACGTGGTATaGGAGGAAGAGAGGGCCTTCGTTGTTCCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: IVTAQLLEQNVV*EEERAFVVPFL
Trigger: CAGAAAGGGAACAACGAAGGCCCTCTCTTCCTCTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CCA 72 bp GGCAGAGGAAACCAAGCTACTTCACACGTGGAAAGATaGCAGAAACCCTCTAAGTCCCATAGTTTGCACACT +
Preference number: 3 (lower is better)
Translates to: GRGNQATSHVER*QKPSKSHSLHT
Trigger: AGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGAAGTAGCTTGGTTTCCTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTCCTGAGAGTCTATTaGGACTTATGCTTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFLRVY*DLCLKG
Trigger: CCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTATGTGGTTGCTGCTTaGATTCTGGATGGTTTTACT +
Preference number: 3 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRYVVAA*ILDGFT
Trigger: AGTAAAACCATCCAGAATCAAAGCAGCAACCACATA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAGAGACACCTGGGTTaGTTTCCATCTCTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: TLIFDLNYVVAALILDGFERHLG*FPSLEA
Trigger: GGCTTCCAGAGATGGAAACAAACCCAGGTGTCTCTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CCA 72 bp TCTTCATTTAAACATAAAATTCACCCTCCCACCTCCTaGGTGGGAGGCACAGGCCTTTGTTTTAAATTAAAG +
Preference number: 3 (lower is better)
Translates to: SSFKHKIHPPTS*VGGTGLCFKLK
Trigger: CTTTAATTTAAAACAAAGGCCTGTGCCTCCCACCCAGGAGGTGGGAGGGTGAATTTTATGTTTAAATGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACTCAAAGACATGCATaGAGGACCGAAGGCAAATGG +
Preference number: 3 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTQRHA*RTEGKW
Trigger: CCATTTGCCTTCGGTCCTCAATGCATGTCTTTGAGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTATTTGGACTTATGCTaGAAAGGGAAGGGAAGGTCG +
Preference number: 3 (lower is better)
Translates to: TLIFDLNYVVAALILDGFYLDLC*KGKGRS
Trigger: CGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR GCA 72 bp CACAAATCTTCATTCCTGAGAGTCTATTTGGACTTATaGTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTT +
Preference number: 3 (lower is better)
Translates to: HKSSFLRVYLDL*LKGKGRSYTLL
Trigger: AAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAATGAAGATTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTCCTGAGAGTCTATTaGGACTTATGCTTGAAAGGG +
Preference number: 3 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFLRVY*DLCLKG
Trigger: CCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTTTCTGCCCATCCTTaGCACACAATATGGAAATAT +
Preference number: 3 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFSAHP*HTIWKY
Trigger: ATATTTCCATATTGTGTGCAAAGGATGGGCAGAAAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLEVHP*GLWPPG
Trigger: ACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCAGATGTACAGGGCATaGTGCCGGGCAGAACCTGCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRQMYRA*CRAEPA
Trigger: GGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTTGCGTCTAAGTGGTaGACGCCGCGAAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLASKW*TPRRDW
Trigger: CCAGTCTCTTCGCGGCGTCCACCACTTAGACGCAAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACATCCCTGCGGACTGTaGCCGCCCGGTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPHPCGL*PPGLSS
Trigger: GGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAACTCCTGACCTCGGGTaGTCAACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPTPDLG*STRLGL
Trigger: GAGGCCAAGGCGGGTTGATCACCCGAGGTCAGGAGT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTGGTCTCAAACACCTaGCCTCAGATGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLVSNT*PQMIHQ
Trigger: CTGGTGGATCATCTGAGGTCAGGTGTTTGAGACCAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTCTTCTTAGGTGGCTaGGACCCATCTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFFLGG*DPSAED
Trigger: GTCCTCAGCAGATGGGTCCCAGCCACCTAAGAAGAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CAA 72 bp GTGGAAAGATGGCAGAAACCCTCTAAGTCCCATAGTTaGCACACTGCTGCAGTGTACAGTGCAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VERWQKPSKSHS*HTAAVYSAEDW
Trigger: CCAGTCCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCTGCCATCTTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTGGAAATGGATGCTATaGTGGGTCGAACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRWKWML*WVEQDA
Trigger: GGCATCCTGTTCGACCCATCATAGCATCCATTTCCA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTGCCTCTTCTTCTCTaGACTAGCCCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLPLLL*TSPFIH
Trigger: ATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATCATTACAGCCAACTaGAAGCAGTGTGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRIITAN*KQCAPP
Trigger: AGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAATGTACAGGGCATGCTaGCGGGCAGAACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPMYRAC*RAEPAT
Trigger: CGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACAT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGCTTCTTCTTGGATTTaGCATCCCCCTTCACACCCA +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRASSWI*HPPSHP
Trigger: TGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGCTCACTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAGTGAGC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACCTGCTGTCAAGGGCTaGCTGAGTTCCGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPPAVKG*LSSACT
Trigger: AGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTGAAAGGGTCAACATaGCAGGAGCAGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLKGST*QEQISW
Trigger: CCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATGCTCCTCCTGCTTTTaGTCCTTTAGGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPCSSCF*SFRPAC
Trigger: GCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLEVHP*GLWPPG
Trigger: ACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACTGCCGGGCAGAACCTaGCACGATGTATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLPGRT*HDVFPI
Trigger: GATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRSFRPA*LLLLGF
Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTCACACGTGGAAAGATaGCAGAAACCCTCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRSHVER*QKPSKS
Trigger: GGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTCCAGTTGTCACTCTaGAGGAAGCAACAAGATCCT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFQLSL*RKQQDP
Trigger: AGGATCTTGTTGCTTCCTTCAGAGTGACAACTGGAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCCGGGCAAACTCAATTaGCTTAATGGCTGTGGTATT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRPGKLN*LNGCGI
Trigger: AATACCACAGCCATTAAGTCAATTGAGTTTGCCCGG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAACAAGGGAAAACCCTaGATTGTTACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRNKGKP*IVTAQL
Trigger: AAGCTGGGCTGTAACAATTCAGGGTTTTCCCTTGTT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACTCCTGACCTCGGGTaGTCAACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTPDLG*STRLGL
Trigger: GAGGCCAAGGCGGGTTGATCACCCGAGGTCAGGAGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAGTCACTCAAAGACATaGATTGAGGACCGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRSHSKT*IEDRRQ
Trigger: TTGCCTTCGGTCCTCAATGCATGTCTTTGAGTGACT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTAAGTCCCATAGTTTaGACACTGCTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLSPIV*TLLQCT
Trigger: TGTACACTGCAGCAGTGTGCAAACTATGGGACTTAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACAACTTGCGTCTAAGTaGTGGACGCCGCGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPQLASK*WTPRRD
Trigger: GTCTCTTCGCGGCGTCCACCACTTAGACGCAAGTTG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLPQGQ*VNTIEP
Trigger: AGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTGGACTGCATCCGGTaGGGGGCCGTAAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLDCIR*GAVRIF
Trigger: GAAAATCCTTACGGCCCCCCACCGGATGCAGTCCAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAAGCTACTTCACACGTaGAAAGATGGCAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRKLLHT*KDGRNP
Trigger: AGGGTTTCTGCCATCTTTCCACGTGTGAAGTAGCTT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAACATGTTTGGAATCTaGAAGGGTCAACATGACAGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRNMFGI*KGQHDR
Trigger: CCTGTCATGTTGACCCTTTCAGATTCCAAACATGTT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCTCCAGTTTTCTACTTaGTTCTGTGCCCAGATAGAT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRLQFST*FCAQID
Trigger: ATCTATCTGGGCACAGAATCAAGTAGAAAACTGGAG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTATGTACAGGGCATGCTaGCGGGCAGAACCTGCCACG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFMYRAC*RAEPAT
Trigger: CGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACAT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCAGATGTACAGGGCATaGTGCCGGGCAGAACCTGCC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFQMYRA*CRAEPA
Trigger: GGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGAAGTCTGGTGCAAATaGACTCCAGTTTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQREVWCK*TPVFYL
Trigger: CAAGTAGAAAACTGGAGTGCATTTGCACCAGACTTC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGCATCAGCCCCTGTCTaGTCAGGCTCACTCTTATCT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPASAPV*SGSLLS
Trigger: AGATAAGAGTGAGCCTGAGCAGACAGGGGCTGATGC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATGGCTGAGTTCCGCCTaGACTTTACCCTTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPWLSSA*TLPFAD
Trigger: ATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGTCTATTTGGACTTATaGTTGAAAGGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRVYLDL*LKGKGR
Trigger: CCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACACCCAGTAGTGGATaGACTTCATCATTTGGTACT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTPSSG*TSSFGT
Trigger: AGTACCAAATGATGAAGTCCATCCACTACTGGGTGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAAGTCAAAGCCATGCTaGTACAATCCAAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRKSKPC*YNPKFH
Trigger: ATGGAACTTTGGATTGTATCAGCATGGCTTTGACTT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACTGCCTCTTCTTCTCTaGACTAGCCCCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLPLLL*TSPFIH
Trigger: ATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTGTCAAGGGCTGGCTaGGTTCCGCCTGCACTTTAC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLSRAG*VPPALY
Trigger: GTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCAAAGTGAGAAAGAATaGAGAACTTCGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRQSEKE*RTSKVF
Trigger: GAAGACCTTCGAAGTTCTTCATTCTTTCTCACTTTG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCACATGATGGCAAAGTaGGAAAGAATGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRHMMAK*ERMKNF
Trigger: GAAGTTCTTCATTCTTTCTCACTTTGCCATCATGTG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTGGTCTTGAACTCCTaGCCTCGGGTGATCAACCCG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLVLNS*PRVINP
Trigger: CGGGTTGATCACCCGAGGTCAGGAGTTCAAGACCAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAATCATTACAGCCAACTaGAAGCAGTGTGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPIITAN*KQCAPP
Trigger: AGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGAT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTGCCGGGCAGAACCTaGCACGATGTATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLPGRT*HDVFPI
Trigger: GATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLGRPA*FFLDLP
Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGAACTATGTGGTTGCTaGTTTGATTCTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRELCGC*FDSGWF
Trigger: AAACCATCCAGAATCAAAGCAGCAACCACATAGTTC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTTGAACTATGTGGTTaGTGCTTTGATTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFELCG*CFDSGW
Trigger: CCATCCAGAATCAAAGCAGCAACCACATAGTTCAAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRIGLLR*VKGIET
Trigger: GGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACAACATTTCTTCCATaGGGTCCTATTCACCAAATC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTTFLP*GPIHQI
Trigger: GATTTGGTGAATAGGACCCCATGGAAGAAATGTTGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACGCCGCGAAGAGACTaGCGCAAGCTCCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTPRRD*RKLRRL
Trigger: AAGTCTTCGGAGCTTGCGCCAGTCTCTTCGCGGCGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACAATTTTCAAATGACTaGCCACAGTGTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPQFSND*PQCPEA
Trigger: GGCCTCTGGACACTGTGGTCAGTCATTTGAAAATTG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTATACTGGTTTTAAATaGTGGAGTGAGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRYTGFK*WSETKR
Trigger: CCTCTTTGTCTCACTCCATCATTTAAAACCAGTATA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATCACCAGGTTGCCAATaGTCTTCTCCCAGATGTACA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSPGCQ*SSPRCT
Trigger: TGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGAATCTTCACCAGGTTaGCAATGCTCTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPESSPG*QCSSPR
Trigger: TCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCAACTTGCGTCTAAGTaGTGGACGCCGCGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFQLASK*WTPRRD
Trigger: GTCTCTTCGCGGCGTCCACCACTTAGACGCAAGTTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATCCATCAGCTTCCTCTaGATAGTTCTGCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSISFL*IVLPKG
Trigger: TCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTGGACTGCATCCGGTaGGGGGCCGTAAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLDCIR*GAVRIF
Trigger: GAAAATCCTTACGGCCCCCCACCGGATGCAGTCCAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGAATATAGGAGGTATCTaGGGAGAGGAGAAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRNIGGI*GEEKFK
Trigger: TTTAAACTTCTCCTCTCCCCAGATACCTCCTATATT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGACAATGAACCAATATTaGAGGGAAACATGCAATGAG +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRTMNQY*RETCNE
Trigger: CTCATTGCATGTTTCCCTCCAATATTGGTTCATTGT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCACTCACGAGTTTATaGCCATCTCGGCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFALTSL*PSRLQH
Trigger: ATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACCGGGCAAACTCAATTaGCTTAATGGCTGTGGTATT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPPGKLN*LNGCGI
Trigger: AATACCACAGCCATTAAGTCAATTGAGTTTGCCCGG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTGGTCTCAAACACCTaGCCTCAGATGATCCACCAG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLVSNT*PQMIHQ
Trigger: CTGGTGGATCATCTGAGGTCAGGTGTTTGAGACCAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCATCAGCCCCTGTCTaGTCAGGCTCACTCTTATCT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFASAPV*SGSLLS
Trigger: AGATAAGAGTGAGCCTGAGCAGACAGGGGCTGATGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAGTCACTCAAAGACATaGATTGAGGACCGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSHSKT*IEDRRQ
Trigger: TTGCCTTCGGTCCTCAATGCATGTCTTTGAGTGACT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGCACAAACATCCAAATaGACAGGCAGAGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPAQTSK*TGRGNQ
Trigger: TTGGTTTCCTCTGCCTGTGCATTTGGATGTTTGTGC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTCTTCTTAGGTGGCTaGGACCCATCTGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFFLGG*DPSAED
Trigger: GTCCTCAGCAGATGGGTCCCAGCCACCTAAGAAGAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGAGTTTCGGTTTAAATaGAGAATCTTTCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQREFRFK*RIFLFT
Trigger: GGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGTTTGTTTCCATCTCTaGAAGCCAGCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPVCFHL*KPAQVK
Trigger: CTTTACCTGTGCTGGCTTCCAGAGATGGAAACAAAC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAAGCTACTTCACACGTaGAAAGATGGCAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPKLLHT*KDGRNP
Trigger: AGGGTTTCTGCCATCTTTCCACGTGTGAAGTAGCTT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATCAAGAAATCCCAGATaGCAATTCGGCCATCATTAC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSRNPR*QFGHHY
Trigger: GTAATGATGGCCGAATTGTCATCTGGGATTTCTTGA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAAGAACATCCCACTGTaGCACTATGTTATCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPKNIPL*HYVISG
Trigger: TCCACTGATAACATAGTGTCACAGTGGGATGTTCTT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATGCCATCATAAACTCTaGTTATTCGATCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPCHHKL*LFDLPC
Trigger: ACACGGCAGATCGAATAATCAGAGTTTATGATGGCA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTGGAAATGGATGCTATaGTGGGTCGAACAGGATGCC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFWKWML*WVEQDA
Trigger: GGCATCCTGTTCGACCCATCATAGCATCCATTTCCA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAATGGGAGATAGGAAATaGCATGTCAAAATGACGCTG +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPMGDRK*HVKMTL
Trigger: CAGCGTCATTTTGACATGTCATTTCCTATCTCCCAT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGAGGGAAACATGCAATaGGAGGAAAACAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPEGNMQ*EENKGK
Trigger: TTTTCCCTTGTTTTCCTCTCATTGCATGTTTCCCTC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACTCAGAGAAGCTACTaGGCCCTTTTCACACCTGGT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTQRSY*ALFTPG
Trigger: ACCAGGTGTGAAAAGGGCTCAGTAGCTTCTCTGAGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATCGCCTATCAAAAGATaGCACAACGTTCAAATCGGA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSPIKR*HNVQIG
Trigger: TCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAAATCCTGCAATTTCTaGATAGGTTCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPKSCNF*IGSGSP
Trigger: TGGAGAGCCTGAACCTATGCAGAAATTGCAGGATTT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCTTCTTCTTGGATTTaGCATCCCCCTTCACACCCA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFASSWI*HPPSHP
Trigger: TGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLGRPA*FFLDLP
Trigger: TGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCTCACTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAGTGAGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGGGAATCGAAACCTCTaGTCACAGTCGCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFGNRNL*SQSPER
Trigger: TCTTTCAGGCGACTGTGACCAGAGGTTTCGATTCCC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCTCCTCTCGTCCCATaGAGAATCTTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSPLVP*RIFTRL
Trigger: CAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGGTAATCAATGTGTTTaGCTACCTATAGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPGNQCV*LPIGAS
Trigger: GGATGCTCCTATAGGTAGCCAAACACATTGATTACC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTGAAAGGGTCAACATaGCAGGAGCAGATTTCATGG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLKGST*QEQISW
Trigger: CCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTTCATCCAATTCTTTaGAGTCTGGTGCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPFHPIL*SLVQMH
Trigger: GTGCATTTGCACCAGACTTCAAAGAATTGGATGAAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTTCTCTTTACCTTTTaGTCCTTTAGGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFLFTF*SFRPAC
Trigger: GCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCACCAGGTTGCCAATaGTCTTCTCCCAGATGTACA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSPGCQ*SSPRCT
Trigger: TGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAATCTTCACCAGGTTaGCAATGCTCTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFESSPG*QCSSPR
Trigger: TCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCCTTTAGGCCGGCCTaGTTGCTTCTTCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSFRPA*LLLLGF
Trigger: AAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGCAGAACAACATGTTTaGAATCTGAAAGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPAEQHV*NLKGST
Trigger: TGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGTAAGGATTTTCTTCTaGGTCTTCTACCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFVRIFF*VFYLRG
Trigger: GCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTAC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAGCCTCCAGTGTAGCTaGGATTACAGGCATGTACTA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSLQCS*DYRHVL
Trigger: TAGTACATGCCTGTAATCCCAGCTACACTGGAGGCT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCACACGTGGAAAGATaGCAGAAACCCTCTAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSHVER*QKPSKS
Trigger: GGACTTAGAGGGTTTCTGCCATCTTTCCACGTGTGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATATACTGGTTTTAAATaGTGGAGTGAGACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPYTGFK*WSETKR
Trigger: CCTCTTTGTCTCACTCCATCATTTAAAACCAGTATA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTAAGTCCCATAGTTTaGACACTGCTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLSPIV*TLLQCT
Trigger: TGTACACTGCAGCAGTGTGCAAACTATGGGACTTAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAACACTATGTTATCAGTaGAAGCACTCACGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPTLCYQ*KHSRVY
Trigger: ATAAACTCGTGAGTGCTTCCACTGATAACATAGTGT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAATATAGGAGGTATCTaGGGAGAGGAGAAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPNIGGI*GEEKFK
Trigger: TTTAAACTTCTCCTCTCCCCAGATACCTCCTATATT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTCTTGAGCAAAACGTaGTATGAGAGGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFLSKT*YERKRG
Trigger: CCCTCTCTTCCTCTCATACCACGTTTTGCTCAAGAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTGTTGAGAGACACCTaGGTTTGTTTCCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLLRDT*VCFHLW
Trigger: CCAGAGATGGAAACAAACCCAGGTGTCTCTCAACAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATGCTTTGATTCTGGATaGTTTTACTTTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPCFDSG*FYFTPC
Trigger: GCAAGGAGTAAAGTAAAACCATCCAGAATCAAAGCA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
3UTR CAA 72 bp AAATCTTCATTCCTGAGAGTCTATTTGGACTTATGCTaGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KSSFLRVYLDLC*KGKGRSYTLLP
Trigger: TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAATGAAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCAAGAAATCCCAGATaGCAATTCGGCCATCATTAC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSRNPR*QFGHHY
Trigger: GTAATGATGGCCGAATTGTCATCTGGGATTTCTTGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAAGCAACAAGATCCTaGGAATCTGTTTTTAGGACC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFEATRS*ESVFRT
Trigger: GGTCCTAAAAACAGATTCTCAGGATCTTGTTGCTTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTGCCATCATAAACTCTaGTTATTCGATCTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFCHHKL*LFDLPC
Trigger: ACACGGCAGATCGAATAATCAGAGTTTATGATGGCA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTCCAGTTTTCTACTTaGTTCTGTGCCCAGATAGAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLQFST*FCAQID
Trigger: ATCTATCTGGGCACAGAATCAAGTAGAAAACTGGAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCGCCTATCAAAAGATaGCACAACGTTCAAATCGGA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSPIKR*HNVQIG
Trigger: TCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAAATCCTGCAATTTCTaGATAGGTTCAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFKSCNF*IGSGSP
Trigger: TGGAGAGCCTGAACCTATGCAGAAATTGCAGGATTT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTCTACTTGATTCTGTaGCCAGATAGATACCACTCC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFYLIL*PDRYHS
Trigger: GGAGTGGTATCTATCTGGGCACAGAATCAAGTAGAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAAAGAACACACTGGATaGATGTGTGCACTAATTATT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPKEHTG*MCALII
Trigger: AATAATTAGTGCACACATCCATCCAGTGTGTTCTTT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAATGGACTTCATCATTTaGTACTCCTTGAAGTTCTAT +
Preference number: 4 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPMDFII*YSLKFY
Trigger: ATAGAACTTCAAGGAGTACCAAATGATGAAGTCCAT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACACCCAGTAGTGGATaGACTTCATCATTTGGTACT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTPSSG*TSSFGT
Trigger: AGTACCAAATGATGAAGTCCATCCACTACTGGGTGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAAGTCAAAGCCATGCTaGTACAATCCAAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFKSKPC*YNPKFH
Trigger: ATGGAACTTTGGATTGTATCAGCATGGCTTTGACTT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTTCATCCAATTCTTTaGAGTCTGGTGCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFHPIL*SLVQMH
Trigger: GTGCATTTGCACCAGACTTCAAAGAATTGGATGAAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCAAAGTGAGAAAGAATaGAGAACTTCGAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFQSEKE*RTSKVF
Trigger: GAAGACCTTCGAAGTTCTTCATTCTTTCTCACTTTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTCTTTGAAGTCTGGTaGAAATGCACTCCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFFEVW*KCTPVF
Trigger: GAAAACTGGAGTGCATTTGCACCAGACTTCAAAGAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAACTATGTGGTTGCTaGTTTGATTCTGGATGGTTT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFELCGC*FDSGWF
Trigger: AAACCATCCAGAATCAAAGCAGCAACCACATAGTTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFIGLLR*VKGIET
Trigger: GGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAAT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCAGAACAACATGTTTaGAATCTGAAAGGGTCAACA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFAEQHV*NLKGST
Trigger: TGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACAACATTTCTTCCATaGGGTCCTATTCACCAAATC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTTFLP*GPIHQI
Trigger: GATTTGGTGAATAGGACCCCATGGAAGAAATGTTGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTATTCACCTTGATCTTTaGTTTGAACTATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFIHLDL*FELCGC
Trigger: GCAACCACATAGTTCAAATCAAAGATCAAGGTGAAT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR TCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCACTGGTCTAACTCATaGCAGTCTCAAAATGAATAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFHWSNS*QSQNEY
Trigger: ATATTCATTTTGAGACTGTCATGAGTTAGACCAGTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCTATTCACCAAATCCTaGAATTTCTGCATAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLFTKS*NFCIGS
Trigger: TGAACCTATGCAGAAATTGCAGGATTTGGTGAATAG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTGCTTTGATTCTGGATaGTTTTACTTTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFCFDSG*FYFTPC
Trigger: GCAAGGAGTAAAGTAAAACCATCCAGAATCAAAGCA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR GCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTCACTGGATGGATGTGTaGACTAATTATTTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFHWMDV*TNYFSN
Trigger: ATTGCTAAAATAATTAGTGCACACATCCATCCAGTG...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CCA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTATGGACTTCATCATTTaGTACTCCTTGAAGTTCTAT +
Preference number: 4 (lower is better)
Translates to: TLIFDLNYVVAALILDGFMDFII*YSLKFY
Trigger: ATAGAACTTCAAGGAGTACCAAATGATGAAGTCCAT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 90 bp CTGCCCAAAGGACTCCAGCAACTCGAGGTTCATCCCTGCGGACTGTaGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTCTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: LPKGLQQLEVHPCGL*PPGLSSGNNTFSPA
Trigger: GGCCGGGGAGAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 90 bp GTTCCATCAGCTTCCCAGCAACTCGAGGTTCATCCCTGCGGACTGTaGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTCTCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: VPSASQQLEVHPCGL*PPGLSSGNNTFSPA
Trigger: GGCCGGGGAGAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGGAAGCTGATGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484379.1
CDS GCA 90 bp TGGATAGTTCTGCCCAAAGGACTCCAGCAACTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTC +
Preference number: 5 (lower is better)
Translates to: WIVLPKGLQQLEVHP*GLWPPGLSSGNNTF
Trigger: GAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAACTATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp CAATCCAAAGTTCCATCAGCTTCCCAGCAACTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTC +
Preference number: 5 (lower is better)
Translates to: QSKVPSASQQLEVHP*GLWPPGLSSGNNTF
Trigger: GAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGGAAGCTGATGGAACTTTGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484379.1
CDS GCA 90 bp ATCTTCACCAGGTTGCCAATGCTCTTCTCCCAGATGTACAGGGCATaGTGCCGGGCAGAACCTGCCACGATGTATTCCCCATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: IFTRLPMLFSQMYRA*CRAEPATMYSPSPE
Trigger: CTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp GGAGTTCTCCTCTCGTCCCATGGAGAATCTTCACCAGGTTGCCAATaGTCTTCTCCCAGATGTACAGGGCATGCTGCCGGGCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: GVLLSSHGESSPGCQ*SSPRCTGHAAGQNL
Trigger: CAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp TTCACCAGGTTGCCAATGCTCTTCTCCCAGATGTACAGGGCATGCTaGCGGGCAGAACCTGCCACGATGTATTCCCCATCCCCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: FTRLPMLFSQMYRAC*RAEPATMYSPSPEK
Trigger: TTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp TCTGAGATTGCTCCTCCTGCTGTCAAGGGCTGGCTGAGTTCCGCCTaGACTTTACCCTTCGCTGATCCTTCCAGAGGTAAACCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SEIAPPAVKGWLSSA*TLPFADPSRGKPLS
Trigger: GGACAGAGGTTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGCCGGCTTCAGCAACTaGCGTCTAAGTGGTGGACGC +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRAGFSN*RLSGGR
Trigger: GCGTCCACCACTTAGACGCAAGTTGCTGAAGCCGGC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGATCCATCAAGGAGGTTaGGACTGCATCCGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRIHQGG*DCIRWG
Trigger: CCCCCACCGGATGCAGTCCAAACCTCCTTGATGGAT...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp AATGCTCTTCTCCCAGATGTACAGGGCATGCTGCCGGGCAGAACCTaGCACGATGTATTCCCCATCCCCAGAGAAACAACATTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: NALLPDVQGMLPGRT*HDVFPIPRETTFLP
Trigger: TGGAAGAAATGTTGTTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp TCTGAGATTGCTCCTCCTGCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCCAGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: SEIAPPAFDPLGRPA*FFLDLPSPFTPSSG
Trigger: TCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGCAATCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS GCA 90 bp GATACCACTCCACTGGAAATGGATGCTATGATGGGTCGAACAGGATaGCAAGCTACATCCAAGAGGAGTTCTCCTCTCGTCCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: DTTPLEMDAMMGRTG*QATSKRSSPLVPWR
Trigger: TCTCCATGGGACGAGAGGAGAACTCCTCTTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 90 bp ACAGGATGCCAAGCTACATCCAAGAGGAGTTCTCCTCTCGTCCCATaGAGAATCTTCACCAGGTTGCCAATGCTCTTCTCCCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: TGCQATSKRSSPLVP*RIFTRLPMLFSQMY
Trigger: GTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGATGTAGCTTGGCATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTTAGGCCGGCCTGCTaGCTTCTTCTTGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFRPAC*LLLGFA
Trigger: GGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS TCA 90 bp CAAATCGGAGTCATCGTCCACCGGCAGAACAACATGTTTGGAATCTaGAAGGGTCAACATGACAGGAGCAGATTTCATGGGACACACGAG +
Preference number: 5 (lower is better)
Translates to: QIGVIVHRQNNMFGI*KGQHDRSRFHGTHE
Trigger: CTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTGGACGATGACTCCGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp GGAGAATCTTTCTCTTTACCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCCAGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: GESFSLPFDPLGRPA*FFLDLPSPFTPSSG
Trigger: TCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAAAGATTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTCTAAGTCCCATAGTTaGCACACTGCTGCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRSKSHS*HTAAVY
Trigger: GTACACTGCAGCAGTGTGCAAACTATGGGACTTAGA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 90 bp TGTCAAGAAATCCCAGATGACAATTCGGCCATCATTACAGCCAACTaGAAGCAGTGTGCCCCACCTGTTAAAGGTGCAAGTCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: CQEIPDDNSAIITAN*KQCAPPVKGASQSH
Trigger: ATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCGAATTGTCATCTGGGATTTCTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264515.11
ENST00000367164.1
ENST00000484379.1
CDS GCA 90 bp TACTTGATTCTGTGCCCAGATAGATACCACTCCACTGGAAATGGATaGTATGATGGGTCGAACAGGATGCCAAGCTACATCCAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: YLILCPDRYHSTGNG*YDGSNRMPSYIQEE
Trigger: CTCCTCTTGGATGTAGCTTGGCATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATCTGGGCACAGAATCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 90 bp CACAGTCGCCTGAAAGAACATCCCACTGTGACACTATGTTATCAGTaGAAGCACTCACGAGTTTATGACCATCTCGGCTCCAGCATAAAG +
Preference number: 5 (lower is better)
Translates to: HSRLKEHPTVTLCYQ*KHSRVYDHLGSSIK
Trigger: CTTTATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAGGCGACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRGRTTC*ESERVN
Trigger: GTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGCCGGCTTCAGCAACTaGCGTCTAAGTGGTGGACGC +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFAGFSN*RLSGGR
Trigger: GCGTCCACCACTTAGACGCAAGTTGCTGAAGCCGGC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATGCTTCTTCTTGGATTaGCCATCCCCCTTCACACCC +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPCFFLD*PSPFTP
Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGAGAGACACCTGGGTTaGTTTCCATCTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPERHLG*FPSLEA
Trigger: GGCTTCCAGAGATGGAAACAAACCCAGGTGTCTCTC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 90 bp CGAGAACCTTGTTCTGATCTCGTGGATGATATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACCTCTGGTCACAGTCGCCTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: REPCSDLVDDIGLLR*VKGIETSGHSRLKE
Trigger: TTCTTTCAGGCGACTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAGAACAAGGTTCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAAGAATCTTCACCAGGTaGCCAATGCTCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPRIFTR*PMLFSQ
Trigger: CTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGGATGGACTTCATCATTaGGTACTCCTTGAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRDGLHH*VLLEVL
Trigger: TAGAACTTCAAGGAGTACCAAATGATGAAGTCCATC...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGCCAAAATCTTGCCTTTaGCGTTTCCCGTATAAATAT +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRPKSCL*RFPYKY
Trigger: ATATTTATACGGGAAACGCAAAAGGCAAGATTTTGG...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp AGAAACCCTCTAAGTCCCATAGTTTGCACACTGCTGCAGTGTACAGTGCAGAGGTTTTCATCCAATTCTTaGAAGTCTGGTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RNPLSPIVCTLLQCTVQRFSSNS*KSGANA
Trigger: TGCATTTGCACCAGACTTCAAAGAATTGGATGAAAA...CCTCTGCACTGTACACTGCAGCAGTGTGCAAACTATGGGACTTAGAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTACAGCCCAGCTTCTaGAGCAAAACGTGGTATGAG +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLQPSF*SKTWYE
Trigger: CTCATACCACGTTTTGCTCAAGAAGCTGGGCTGTAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAGTTTTACTTTACTCCTaGCATAGATTCCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPVLLYS*HRFPHP
Trigger: GGGGTGGGGGAATCTATGCAAGGAGTAAAGTAAAAC...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTTAGGCCGGCCTGCTaGCTTCTTCTTGGATTTGCC +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFRPAC*LLLGFA
Trigger: GGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATATTTGGACTTATGCTaGAAAGGGAAGGGAAGGTCG +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPYLDLC*KGKGRS
Trigger: CGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTTAGGACCAAAATCTaGCCTTTTGCGTTTCCCGTA +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPFRTKI*PFAFPV
Trigger: TACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTAATGGCTGTGGTATaGCTTGTTCCAGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPLMAVV*LVPVVT
Trigger: AGTGACAACTGGAACAAGCAATACCACAGCCATTAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAGAATCTTCACCAGGTaGCCAATGCTCTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFRIFTR*PMLFSQ
Trigger: CTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCAACTCCAGTTTTCTACTaGATTCTGTGCCCAGATAGA +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPTPVFY*ILCPDR
Trigger: TCTATCTGGGCACAGAATCAAGTAGAAAACTGGAGT...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTCCTGAGAGTCTATTaGGACTTATGCTTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPFLRVY*DLCLKG
Trigger: CCCTTTCAAGCATAAGTCCAAATAGACTCTCAGGAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGAGACAAAGAGGCTCTaGCTGACGTGCTCTACTTTG +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFETKRL*LTCSTL
Trigger: CAAAGTAGAGCACGTCAGCAAGAGCCTCTTTGTCTC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATCTATATTGGTTGTTTaGGGTTTCTTCTTAGGTGGC +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPSILVV*GFFLGG
Trigger: GCCACCTAAGAAGAAACCCAAAACAACCAATATAGA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAGGGAAAACCCTGAATaGTTACAGCCCAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFRENPE*LQPSFL
Trigger: CAAGAAGCTGGGCTGTAACAATTCAGGGTTTTCCCT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCTAAGTCCCATAGTTaGCACACTGCTGCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSKSHS*HTAAVY
Trigger: GTACACTGCAGCAGTGTGCAAACTATGGGACTTAGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCACCAAAATCTTGCCTTTaGCGTTTCCCGTATAAATAT +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPPKSCL*RFPYKY
Trigger: ATATTTATACGGGAAACGCAAAAGGCAAGATTTTGG...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp GTCTATTTGGACTTATGCTTGAAAGGGAAGGGAAGGTCGTATACTCTTCTTCCATTTTCATCCAATTCTTaGAAGTCTGGTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: VYLDLCLKGKGRSYTLLPFSSNS*KSGANA
Trigger: TGCATTTGCACCAGACTTCAAAGAATTGGATGAAAA...TGGAAGAAGAGTATACGACCTTCCCTTCCCTTTCAAGCATAAGTCCAAATAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTTAGGACCAAAATCTaGCCTTTTGCGTTTCCCGTA +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFFRTKI*PFAFPV
Trigger: TACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTTAATGGCTGTGGTATaGCTTGTTCCAGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFLMAVV*LVPVVT
Trigger: AGTGACAACTGGAACAAGCAATACCACAGCCATTAA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTACTCCAGTTTTCTACTaGATTCTGTGCCCAGATAGA +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFTPVFY*ILCPDR
Trigger: TCTATCTGGGCACAGAATCAAGTAGAAAACTGGAGT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTCTATATTGGTTGTTTaGGGTTTCTTCTTAGGTGGC +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFSILVV*GFFLGG
Trigger: GCCACCTAAGAAGAAACCCAAAACAACCAATATAGA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTGATGGACTTCATCATTaGGTACTCCTTGAAGTTCTA +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFDGLHH*VLLEVL
Trigger: TAGAACTTCAAGGAGTACCAAATGATGAAGTCCATC...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTTATGTGGTTGCTGCTTaGATTCTGGATGGTTTTACT +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFYVVAA*ILDGFT
Trigger: AGTAAAACCATCCAGAATCAAAGCAGCAACCACATA...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS-3UTR CAA 90 bp ACCTTGATCTTTGATTTGAACTATGTGGTTGCTGCTTTGATTCTGGATGGTTTTAAAAATATAGACGTTTaGCAACTGACTCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: TLIFDLNYVVAALILDGFKNIDV*QLTQGE
Trigger: CTCTCCCTGAGTCAGTTGCAAAACGTCTATATTTTT...AAAACCATCCAGAATCAAAGCAGCAACCACATAGTTCAAATCAAAGATCAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp CTGCCCAAAGGACTCCAGCAACTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGTCTCAGCTCCGGCAAC +
Preference number: 6 (lower is better)
Translates to: LPKGLQQLEVHP*GLWPPGLSSGN
Trigger: GTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp GTTCCATCAGCTTCCCAGCAACTCGAGGTTCATCCCTaGGGACTGTGGCCGCCCGGTCTCAGCTCCGGCAAC +
Preference number: 6 (lower is better)
Translates to: VPSASQQLEVHP*GLWPPGLSSGN
Trigger: GTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGGAAGCTGATGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484379.1
CDS CCA 72 bp GGACTCCAGCAACTCGAGGTTCATCCCTGCGGACTGTaGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTC +
Preference number: 6 (lower is better)
Translates to: GLQQLEVHPCGL*PPGLSSGNNTF
Trigger: GAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 72 bp CTCCCCGGCCGGCTTCAGCAACTTGCGTCTAAGTGGTaGACGCCGCGAAGAGACTGGCGCAAGCTCCGAAGA +
Preference number: 6 (lower is better)
Translates to: LPGRLQQLASKW*TPRRDWRKLRR
Trigger: TCTTCGGAGCTTGCGCCAGTCTCTTCGCGGCGTCCACCACTTAGACGCAAGTTGCTGAAGCCGGCCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS CCA 72 bp CTTCTCCCCGGCCGGCTTCAGCAACTTGCGTCTAAGTaGTGGACGCCGCGAAGAGACTGGCGCAAGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LLPGRLQQLASK*WTPRRDWRKLR
Trigger: TCGGAGCTTGCGCCAGTCTCTTCGCGGCGTCCACCACTTAGACGCAAGTTGCTGAAGCCGGCCGGGGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS CCA 72 bp GCTTCCCAGCAACTCGAGGTTCATCCCTGCGGACTGTaGCCGCCCGGTCTCAGCTCCGGCAACAACACCTTC +
Preference number: 6 (lower is better)
Translates to: ASQQLEVHPCGL*PPGLSSGNNTF
Trigger: GAAGGTGTTGTTGCCGGAGCTGAGACCGGGCGGCCACAGTCCGCAGGGATGAACCTCGAGTTGCTGGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484379.1
CDS CCA 72 bp CAACTTGCGTCTAAGTGGTGGACGCCGCGAAGAGACTaGCGCAAGCTCCGAAGACTTTCGGCCTTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: QLASKWWTPRRD*RKLRRLSALEG
Trigger: GCCTTCTAAGGCCGAAAGTCTTCGGAGCTTGCGCCAGTCTCTTCGCGGCGTCCACCACTTAGACGCAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS GCA 72 bp CTCCCAGATGTACAGGGCATGCTGCCGGGCAGAACCTaGCACGATGTATTCCCCATCCCCAGAGAAACAACA +
Preference number: 6 (lower is better)
Translates to: LPDVQGMLPGRT*HDVFPIPRETT
Trigger: TGTTGTTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp AGGTTGCCAATGCTCTTCTCCCAGATGTACAGGGCATaGTGCCGGGCAGAACCTGCCACGATGTATTCCCCA +
Preference number: 6 (lower is better)
Translates to: RLPMLFSQMYRA*CRAEPATMYSP
Trigger: TGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp CTCTCGTCCCATGGAGAATCTTCACCAGGTTGCCAATaGTCTTCTCCCAGATGTACAGGGCATGCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: LSSHGESSPGCQ*SSPRCTGHAAG
Trigger: CCCGGCAGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp GCTCCTCCTGCTGTCAAGGGCTGGCTGAGTTCCGCCTaGACTTTACCCTTCGCTGATCCTTCCAGAGGTAAA +
Preference number: 6 (lower is better)
Translates to: APPAVKGWLSSA*TLPFADPSRGK
Trigger: TTTACCTCTGGAAGGATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS TCA 72 bp GTTCTGAGATTGCTCCTCCTGCTGTCAAGGGCTGGCTaGGTTCCGCCTGCACTTTACCCTTCGCTGATCCTT +
Preference number: 6 (lower is better)
Translates to: VLRLLLLLSRAG*VPPALYPSLIL
Trigger: AAGGATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS GCA 72 bp GCTCCTCCTGCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCC +
Preference number: 6 (lower is better)
Translates to: APPAFDPLGRPA*FFLDLPSPFTP
Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGCAGGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367164.1
CDS CCA 72 bp CCCTTCATCCATCAAGGAGGTTTGGACTGCATCCGGTaGGGGGCCGTAAGGATTTTCTTCTGGGTCTTCTAC +
Preference number: 6 (lower is better)
Translates to: PFIHQGGLDCIR*GAVRIFFWVFY
Trigger: GTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCACCGGATGCAGTCCAAACCTCCTTGATGGATGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp GTTCTCCTCTCGTCCCATGGAGAATCTTCACCAGGTTaGCAATGCTCTTCTCCCAGATGTACAGGGCATGCT +
Preference number: 6 (lower is better)
Translates to: VLLSSHGESSPG*QCSSPRCTGHA
Trigger: AGCATGCCCTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp TTCTTCTTAGGTGGCTGGGACCCATCTGCTGAGGACTaGCTCTTCTTCTCTGAACTAGCCCCTTCATCCATC +
Preference number: 6 (lower is better)
Translates to: FFLGGWDPSAED*LFFSELAPSSI
Trigger: GATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCCTCAGCAGATGGGTCCCAGCCACCTAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 72 bp CAAGCTACATCCAAGAGGAGTTCTCCTCTCGTCCCATaGAGAATCTTCACCAGGTTGCCAATGCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QATSKRSSPLVP*RIFTRLPMLFS
Trigger: GGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGATGTAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp ATCCCAGATGACAATTCGGCCATCATTACAGCCAACTaGAAGCAGTGTGCCCCACCTGTTAAAGGTGCAAGT +
Preference number: 6 (lower is better)
Translates to: IPDDNSAIITAN*KQCAPPVKGAS
Trigger: ACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCGAATTGTCATCTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264515.11
ENST00000367164.1
ENST00000484379.1
CDS GCA 72 bp TTCTCTTTACCTTTTGATCCTTTAGGCCGGCCTGCTTaGTTCTTCTTGGATTTGCCATCCCCCTTCACACCC +
Preference number: 6 (lower is better)
Translates to: FSLPFDPLGRPA*FFLDLPSPFTP
Trigger: GGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGGTAAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264515.11
CDS TCA 72 bp GTCATCGTCCACCGGCAGAACAACATGTTTGGAATCTaGAAGGGTCAACATGACAGGAGCAGATTTCATGGG +
Preference number: 6 (lower is better)
Translates to: VIVHRQNNMFGI*KGQHDRSRFHG
Trigger: CCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTGGACGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 72 bp TGGACTTTTAAGATGGGTGAAGGGAATCGAAACCTCTaGTCACAGTCGCCTGAAAGAACATCCCACTGTGAC +
Preference number: 6 (lower is better)
Translates to: WTFKMGEGNRNL*SQSPERTSHCD
Trigger: GTCACAGTGGGATGTTCTTTCAGGCGACTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CAA 90 bp ACAACGTTCAAATCGGAGTCATCGTCCACCGGCAGAACAACATGTTaGGAATCTGAAAGGGTCAACATGACAGGAGCAGATTTCATGGGA +
Preference number: 6 (lower is better)
Translates to: TTFKSESSSTGRTTC*ESERVNMTGADFMG
Trigger: TCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTGGACGATGACTCCGATTTGAACGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp TCCCGTATAAATATATTCCCCTCGCCTATCAAAAGATaGCACAACGTTCAAATCGGAGTCATCGTCCACCGG +
Preference number: 6 (lower is better)
Translates to: SRINIFPSPIKR*HNVQIGVIVHR
Trigger: CCGGTGGACGATGACTCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGAGGGGAATATATTTATACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 72 bp CTGAAAGAACATCCCACTGTGACACTATGTTATCAGTaGAAGCACTCACGAGTTTATGACCATCTCGGCTCC +
Preference number: 6 (lower is better)
Translates to: LKEHPTVTLCYQ*KHSRVYDHLGS
Trigger: GGAGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGGATGTTCTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264515.11
ENST00000367164.1
ENST00000484379.1
CDS TCA 72 bp GACACTATGTTATCAGTGGAAGCACTCACGAGTTTATaGCCATCTCGGCTCCAGCATAAAGAACACACTGGA +
Preference number: 6 (lower is better)
Translates to: DTMLSVEALTSL*PSRLQHKEHTG
Trigger: TCCAGTGTGTTCTTTATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264515.11
ENST00000367164.1
ENST00000484379.1
CDS CCA 72 bp TGTTCTGATCTCGTGGATGATATTGGACTTTTAAGATaGGTGAAGGGAATCGAAACCTCTGGTCACAGTCGC +
Preference number: 6 (lower is better)
Translates to: CSDLVDDIGLLR*VKGIETSGHSR
Trigger: GCGACTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCCACGAGATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS GCA 72 bp CAACATTTCTTCCATGGGGTCCTATTCACCAAATCCTaGAATTTCTGCATAGGTTCAGGCTCTCCATCTCTT +
Preference number: 6 (lower is better)
Translates to: QHFFHGVLFTKS*NFCIGSGSPSL
Trigger: AAGAGATGGAGAGCCTGAACCTATGCAGAAATTGCAGGATTTGGTGAATAGGACCCCATGGAAGAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CAA 72 bp TTCCGGGCAAACTCAATTGACTTAATGGCTGTGGTATaGCTTGTTCCAGTTGTCACTCTGAAGGAAGCAACA +
Preference number: 6 (lower is better)
Translates to: FRANSIDLMAVV*LVPVVTLKEAT
Trigger: TGTTGCTTCCTTCAGAGTGACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATTGAGTTTGCCCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS CCA 72 bp AAGGATTTTCTTCTGGGTCTTCTACCTCAGGGGCAATaGGTAAATACAATAGAGCCTTTGAATCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: KDFLLGLLPQGQ*VNTIEPLNLPA
Trigger: AGCTGGAAGATTCAAAGGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1
CDS TCA 72 bp CCCAGTAGTGGATGGACTTCATCATTTGGTACTCCTTaGAGTTCTATATTGGTTGTTTTGGGTTTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: PSSGWTSSFGTP*SSILVVLGFFL
Trigger: TAAGAAGAAACCCAAAACAACCAATATAGAACTTCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264515.11
ENST00000367164.1