Pregenerated sensors for RB1CC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000023287Ensembl transcript IDs: ENST00000025008.10, ENST00000435644.6, ENST00000517963.1, ENST00000518211.1, ENST00000518468.1, ENST00000518710.5, ENST00000519912.1, ENST00000521611.1, ENST00000522957.1, ENST00000523594.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAAACTTTGTGCTGCTTTTACCAAATTATGTAGAGCAAGTACATaGTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SKLCAAFTKLCRAST*WCRGSKSQSKGTLR Trigger: CCTCAGGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTTGGTAAAAGCAGCACAAAGTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| 3UTR CCA 90 bp | AAACTTTGTGCTGCTTTTACCAAATTATGTAGAGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCTGAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: KLCAAFTKLCRASTC*CRGSKSQSKGTLRN Trigger: ATTCCTCAGGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTTGGTAAAAGCAGCACAAAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| 3UTR-3UTR TCA 90 bp | AATAGTTCCATCACTTCCATCAGCTGCCTGTTGAACTGCTTTTCACCTCTACACGGTCGTCAGGCACTGTaGAAAGGACTACCACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: NSSITSISCLLNCFSPLHGRQAL*KGLPLF Trigger: GAAAAGTGGTAGTCCTTTTCACAGTGCCTGACGACC...GTGTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGATGGAACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCACCATCAGCTGCCTGTTaGACTGCTTTTCACCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: RSATVCTVSSVSNVRVVPPSAAC*TAFHLY Trigger: GTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGG...TGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTATCACTTCCATCAGCTaGCTGTTGAACTGCTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LRSATVCTVSSVSNVRVVITSIS*LLNCFS Trigger: TGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGAT...AACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| 3UTR CAA 90 bp | ACTCTTCCCTTTAGAACCCAGATGACCAATCCACTGAAAGTGCTTTaGAAGATTGCTGATTACTTATGGCTGATCTTAAAATCAGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: TLPFRTQMTNPLKVL*KIADYLWLILKSVN Trigger: ATTGACTGATTTTAAGATCAGCCATAAGTAATCAGCAATCTTCAAAAGCACTTTCAGTGGATTGGTCATCTGGGTTCTAAAGGGAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| 3UTR CCA 72 bp | GCTGCTTTTACCAAATTATGTAGAGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: AAFTKLCRASTC*CRGSKSQSKGT Trigger: GGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTTGGTAAAAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| 3UTR-3UTR CAA 90 bp | TTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTCCATAATAGTTCCATCACTTaGTGTAACAGTAGCAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LRVAVTCKLGEMNPNSFHNSSIT*CNSSKC Trigger: ACACTTGCTACTGTTACACAAAGTGATGGAACTATT...ATGGAAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| 3UTR TCA 72 bp | GATGACCAATCCACTGAAAGTGCTTTTGAAGATTGCTaGTTACTTATGGCTGATCTTAAAATCAGTCAATCA | + |
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Preference number: 3 (lower is better) Translates to: DDQSTESAFEDC*LLMADLKISQS Trigger: TGATTGACTGATTTTAAGATCAGCCATAAGTAATCAGCAATCTTCAAAAGCACTTTCAGTGGATTGGTCATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCACCTCGGCTCTGGGTCTaGGGCCGGGGGACAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RSATVCTVSSVSNVRVVPPRLWV*GRGTEG Trigger: GCCTTCTGTCCCCCGGCCCCAGACCCAGAGCCGAGG...TGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CCA 90 bp | AATAGTTCCATCACTTCCATCAGCTGCCTGTTGAACTGCTTTTCACCTCTACACAGGGGCCCAGGCGACTaGGGGATTCTGAGGCAACGC | + |
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Preference number: 4 (lower is better) Translates to: NSSITSISCLLNCFSPLHRGPGD*GILRQR Trigger: GCGTTGCCTCAGAATCCCCCAGTCGCCTGGGCCCCT...GTGTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGATGGAACTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CCA 90 bp | GTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCGGGAACCCTGAGGAATaGCTGAACTTCCGAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: VEQVHAGVEVQSHKVREPGNPEE*LNFRRT Trigger: TGTCCTTCGGAAGTTCAGCCATTCCTCAGGGTTCCC...GGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAGACACCGCCGCGGCTTaGTTTGTTATTGTCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: RSATVCTVSSVSNVRVVPDTAAA*FVIVDS Trigger: GGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTC...TGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | AGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCTGAGGAATACCCTGAGGAATGGCTaGACTTCCGAAGGACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: STCWCRGSKSQSKGTLRNTLRNG*TSEGQN Trigger: ATTTTGTCCTTCGGAAGTTCAGCCATTCCTCAGGGT...ATTCCTCAGGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR TCA 90 bp | TATGTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAAAAAGTAAGGGAACCCTaGGGAATGGCTGAACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: YVEQVHAGVEVQSHKVREKVREP*GMAELP Trigger: CGGAAGTTCAGCCATTCCTCAGGGTTCCCTTACTTT...TTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| 3UTR CAA 72 bp | CAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACAGTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: QHLVLNSNLVFA*NGMLKVCHSLH Trigger: GTGCAAACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | TTGAATAGCAATCTTGTATTTGCTTTGAATGGCATGCTTAAGGTCTGCCACAGTGGTCGTCAGGCACTGTaGAAAGGACTACCACTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LNSNLVFALNGMLKVCHSGRQAL*KGLPLF Trigger: GAAAAGTGGTAGTCCTTTTCACAGTGCCTGACGACC...ACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | TTGAATAGCAATCTTGTATTTGCTTTGAATGGCATGCTTAAGGTCTGCCACAGTCCATCAGCTGCCTGTTaGACTGCTTTTCACCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LNSNLVFALNGMLKVCHSPSAAC*TAFHLY Trigger: GTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGG...ACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR GCA 90 bp | AGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAAGGTCTGCCACAGTTTaGACTGTAAGTTCAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RSATVCTVSSVSNVRVVPRSATV*TVSSVS Trigger: TGACACTGAACTTACAGTGCAAACTGTGGCAGACCT...TGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | GCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAGTGTTATATGTTTGCTTTGCTTaGGATTGGCAACTGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: ATVCTVSSVSNVRVVPVLYVCFA*DWQLNG Trigger: GCCATTCAGTTGCCAATCTCAAGCAAAGCAAACATA...TAACACTGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | AGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCTGAGGAATGAGCTTCAACAATTTTaGCTCTTTCTAACAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: STCWCRGSKSQSKGTLRNELQQF*LFLTAL Trigger: TAGAGCTGTTAGAAAGAGTCAAAATTGTTGAAGCTC...ATTCCTCAGGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR GCA 90 bp | TATGTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAATGTAGAGCAAGTACATaGTGGTGTAGAGGTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YVEQVHAGVEVQSHKVRECRAST*WCRGSK Trigger: CTTTGAACCTCTACACCAGCATGTACTTGCTCTACA...TTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR CCA 90 bp | AATAGTTCCATCACTTCCATCAGCTGCCTGTTGAACTGCTTTTCACCTCTACACAGATTGGCAACTGAATaGCATTACTGGTTAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: NSSITSISCLLNCFSPLHRLATE*HYWLNS Trigger: TGAGTTTAACCAGTAATGCCATTCAGTTGCCAATCT...GTGTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGATGGAACTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | AAATTATGTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGCTAAGCAGTACATCTaGGGAACTGTACTAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: KLCRASTCWCRGSKSQSKAKQYI*GTVLRA Trigger: AGCTCTTAGTACAGTTCCTCAGATGTACTGCTTAGC...CTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR GCA 90 bp | TTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTCCATGGCTTATGTTTGCTTTaGTTGAGATTGGCAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: LRVAVTCKLGEMNPNSFHGLCLL*LRLATE Trigger: TTCAGTTGCCAATCTCAAGCAAAGCAAACATAAGCC...ATGGAAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR GCA 90 bp | CAAATTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTATCACTTCCATCAGCTaGCTGTTGAACTGCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QIKSSRYLQIRGNESQFLITSIS*LLNCFS Trigger: TGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGAT...AAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CCA 90 bp | TTGAATAGCAATCTTGTATTTGCTTTGAATGGCATGCTTAAGGTCTGCCACAGTACTGAATGGCATTACTaGTTAAACTCAGAAAACCGG | + |
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Preference number: 4 (lower is better) Translates to: LNSNLVFALNGMLKVCHSTEWHY*LNSENR Trigger: CCGGTTTTCTGAGTTTAACCAGTAATGCCATTCAGT...ACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR TCA 90 bp | AAATTATGTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGAACACCACTTCAGTCTaGCATGTAGGTTATTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: KLCRASTCWCRGSKSQSKNTTSV*HVGYLL Trigger: TAGCAAATAACCTACATGTCAGACTGAAGTGGTGTT...CTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR TCA 90 bp | CCAAATTATGTAGAGCAAGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAATCTGTAATGGTCTGTaGCATTTCATCCAAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: PNYVEQVHAGVEVQSHKVICNGL*HFIQTL Trigger: CAAAGTTTGGATGAAATGTCACAGACCATTACAGAT...TACTTTGTGACTTTGAACCTCTACACCAGCATGTACTTGCTCTACATAATTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS-3UTR TCA 90 bp | TTAAGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTTTATACCTCACCCTCTaGTACAGTTATAATCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LRSATVCTVSSVSNVRVVLYLTL*YSYNRK Trigger: TTTGCGATTATAACTGTATCAGAGGGTGAGGTATAA...AACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR GCA 90 bp | TTAAGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTAGAGTAGCCGTTACTTaGAAATTAGGGGAAATGAAT | + |
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Preference number: 4 (lower is better) Translates to: LRSATVCTVSSVSNVRVVRVAVT*KLGEMN Trigger: ATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCT...AACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CCA 90 bp | ATGGTCTGTGACATTTCATCCAAACTTTGTGCTGCTTTTACCAAATTATGTAGAAGAGCAAGTACATGCTaGTGTAGAGGTTCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MVCDISSKLCAAFTKLCRRASTC*CRGSKS Trigger: TGACTTTGAACCTCTACACCAGCATGTACTTGCTCT...TCTACATAATTTGGTAAAAGCAGCACAAAGTTTGGATGAAATGTCACAGACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS CCA 90 bp | GGGACAGAAGGCCGCGGCCTGTCAGAGCCGAGGGGCCCAGGCGACTaGGGGATTCTGAGGCAACGCCGAGGGCTCGGCAGGGCCGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: GTEGRGLSEPRGPGD*GILRQRRGLGRAAD Trigger: GTCCGCGGCCCTGCCGAGCCCTCGGCGTTGCCTCAGAATCCCCCAGTCGCCTGGGCCCCTCGGCTCTGACAGGCCGCGGCCTTCTGTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000517963.1 ENST00000518211.1 ENST00000518710.5 ENST00000521611.1 |
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| CDS CCA 90 bp | AGGCAACGCCGAGGGCTCGGCAGGGCCGCGGACACCGCCGCGGCTTaGTTTGTTATTGTCGACTCCGTCTCTTCCTCCGCGGCGCATGCC | + |
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Preference number: 5 (lower is better) Translates to: RQRRGLGRAADTAAA*FVIVDSVSSSAAHA Trigger: GGCATGCGCCGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCCCTCGGCGTTGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS GCA 90 bp | TGGATTTGTATCCGTCCCAGCACTGTAGGTACACACTCTTCGATCTaGAGCCATGCATTCTCCTCCATTGACCACCAGCACCTGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: WICIRPSTVGTHSSI*SHAFSSIDHQHLVL Trigger: CAACACCAGGTGCTGGTGGTCAATGGAGGAGAATGCATGGCTGCAGATCGAAGAGTGTGTACCTACAGTGCTGGGACGGATACAAATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000517963.1 ENST00000518710.5 |
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| CDS-3UTR CAA 90 bp | GCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAGTGTTACCGCCGCGGCTTGGTTaGTTATTGTCGACTCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: ATVCTVSSVSNVRVVPVLPPRLG*LLSTPS Trigger: AGACGGAGTCGACAATAACAAACCAAGCCGCGGCGG...TAACACTGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS TCA 90 bp | GGAGATAATTCTTCTAAGGGACAAACTGCAGGACATAAGGGATCCTaGACAGTCAGTGGTGGAGGAGTTCTCGGTGAGGTAGTAGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: GDNSSKGQTAGHKGS*TVSGGGVLGEVVVV Trigger: TACAACTACTACCTCACCGAGAACTCCTCCACCACTGACTGTTCAGGATCCCTTATGTCCTGCAGTTTGTCCCTTAGAAGAATTATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 90 bp | GAACAGTCCTCCAGGTTGGCCATGATTGCAGCCCAGCCTTGGTGTTaGAGATGTTCATCATGTACAAGACCTTCACAAAAAGAACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: EQSSRLAMIAAQPWC*RCSSCTRPSQKEQS Trigger: ACTTTGTTCTTTTTGTGAAGGTCTTGTACATGATGAACATCTTCAACACCAAGGCTGGGCTGCAATCATGGCCAACCTGGAGGACTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS-3UTR CAA 90 bp | CAAATTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTGGACACCGCCGCGGCTaGGTTTGTTATTGTCGACTC | + |
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Preference number: 5 (lower is better) Translates to: QIKSSRYLQIRGNESQFLGHRRG*VCYCRL Trigger: GAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCC...AAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | AATAGTTCCATCACTTCCATCAGCTGCCTGTTGAACTGCTTTTCACCTCTACACTCCATCAGCTGCCTGTaGAACTGCTTTTCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: NSSITSISCLLNCFSPLHSISCL*NCFSPL Trigger: TAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGGA...GTGTAGAGGTGAAAAGCAGTTCAACAGGCAGCTGATGGAAGTGATGGAACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS TCA 90 bp | AGGTGCACAAGCTCCATAAAGTTCTGGGGCTGTAGCTACATATGGTaGAGGAACAAAACTGCTACTACGCAACTTACTGACTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RCTSSIKFWGCSYIW*RNKTATTQLTDFFF Trigger: GAAGAAGAAGTCAGTAAGTTGCGTAGTAGCAGTTTTGTTCCTTCACCATATGTAGCTACAGCCCCAGAACTTTATGGAGCTTGTGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000522957.1 |
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| CDS-3UTR CAA 90 bp | AGGTCTGCCACAGTTTGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAAAGGTCTGCCACAGTTaGCACTGTAAGTTCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RSATVCTVSSVSNVRVVPKVCHS*HCKFSV Trigger: GACACTGAACTTACAGTGCAAACTGTGGCAGACCTT...TGGAACTACTCTAACATTTGACACTGAACTTACAGTGCAAACTGTGGCAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | AGTACATGCTGGTGTAGAGGTTCAAAGTCACAAAGTAAGGGAACCCTGAGGAATAATCTCTTTCCATCTTaGACTAAAGCACCAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: STCWCRGSKSQSKGTLRNNLFPS*TKAPAH Trigger: GTGGGCTGGTGCTTTAGTCAAAGATGGAAAGAGATT...ATTCCTCAGGGTTCCCTTACTTTGTGACTTTGAACCTCTACACCAGCATGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS TCA 90 bp | AAAGTAGCTTTTGGTATGAATTTGAACAGTCCTCCAGGTTGGCCATaGTTGCAGCCCAGCCTTGGTGTTGAAGATGTTCATCATGTACAA | + |
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Preference number: 5 (lower is better) Translates to: KVAFGMNLNSPPGWP*LQPSLGVEDVHHVQ Trigger: TTGTACATGATGAACATCTTCAACACCAAGGCTGGGCTGCAATCATGGCCAACCTGGAGGACTGTTCAAATTCATACCAAAAGCTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS GCA 90 bp | AGTTCTTATCCTTCCGTGGTGGAGGTAGAGGCGGACGAAAGCAAATaGTGTAGAAACGTTAGTTCTAAGTTCAGAATAAACACCTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSYPSVVEVEADESK*CRNVSSKFRINTSE Trigger: TTCTGAGGTGTTTATTCTGAACTTAGAACTAACGTTTCTACAGCATTTGCTTTCGTCCGCCTCTACCTCCACCACGGAAGGATAAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518468.1 |
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| CDS CCA 90 bp | CAGGTAAAGAATCCAGTCTTCCCAAACATTCTCTGTAACTATGTCTaGTTAGGCACTCCAACAGTGGAATCTTGGCCATTACTGAAACTG | + |
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Preference number: 5 (lower is better) Translates to: QVKNPVFPNILCNYV*LGTPTVESWPLLKL Trigger: CAGTTTCAGTAATGGCCAAGATTCCACTGTTGGAGTGCCTAACCAGACATAGTTACAGAGAATGTTTGGGAAGACTGGATTCTTTACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 90 bp | CATATGAATATTTTCTTGTACAGACATCATGCTTGTCTCCATTGCTaGATCCACTCTTCCTTCATCTGCTGTTTCCACAGCGGATCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HMNIFLYRHHACLHC*IHSSFICCFHSGSI Trigger: GATAGATCCGCTGTGGAAACAGCAGATGAAGGAAGAGTGGATTCAGCAATGGAGACAAGCATGATGTCTGTACAAGAAAATATTCATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000522957.1 |
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| CDS CCA 90 bp | CTGATTATCAAGTTTGGCAATAGTTTGACGGCATTCTGCTATAAATaGTCGAATAATCCTTGGATCAAGCCTGCTCATAGAATCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIIKFGNSLTAFCYK*SNNPWIKPAHRIKA Trigger: TGCTTTGATTCTATGAGCAGGCTTGATCCAAGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTTGATAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS-3UTR CAA 90 bp | TGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAGTGTTAACCAGAAATTTGCTTTGCTTGAGATaGGCAACTGAATGGCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: CTVSSVSNVRVVPVLTRNLLCLR*ATEWHY Trigger: GTAATGCCATTCAGTTGCCAATCTCAAGCAAAGCAA...ATTTCTGGTTAACACTGGAACTACTCTAACATTTGACACTGAACTTACAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | TTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTCCATTTATGTTTGCTTTGCTaGAGATTGGCAACTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LRVAVTCKLGEMNPNSFHLCLLC*RLATEW Trigger: CCATTCAGTTGCCAATCTCAAGCAAAGCAAACATAA...ATGGAAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | TTAAGAGTAGCCGTTACTTGCAAATTAGGGGAAATGAATCCCAATTCCTTCCATAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRVAVTCKLGEMNPNSFHNLVFA*NGMLKV Trigger: GACCTTAAGCATGCCATTCAAAGCAAATACAAGATT...ATGGAAGGAATTGGGATTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | TTGAATAGCAATCTTGTATTTGCTTTGAATGGCATGCTTAAGGTCTGCCACAGTAATAGTTCCATCACTTaGTGTAACAGTAGCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNSNLVFALNGMLKVCHSNSSIT*CNSSKC Trigger: ACACTTGCTACTGTTACACAAAGTGATGGAACTATT...ACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS-3UTR CAA 90 bp | TGCACTGTAAGTTCAGTGTCAAATGTTAGAGTAGTTCCAGTGTTAACCAGAAATAAGAGTAGCCGTTACTaGCAAATTAGGGGAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTVSSVSNVRVVPVLTRNKSSRY*QIRGNE Trigger: TTCATTTCCCCTAATTTGCAAGTAACGGCTACTCTT...ATTTCTGGTTAACACTGGAACTACTCTAACATTTGACACTGAACTTACAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518211.1 |
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| CDS TCA 90 bp | ACTTCATACATTTCCAATGCAAGCTGTGTCCTTGAAGCAACAGTATaGAAAACTGCAGGCATCATAAGAGATTCTTCAACTTTTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSYISNASCVLEATV*KTAGIIRDSSTFIS Trigger: GGAAATAAAAGTTGAAGAATCTCTTATGATGCCTGCAGTTTTTCATACTGTTGCTTCAAGGACACAGCTTGCATTGGAAATGTATGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS GCA 90 bp | TTTCATATTCTGATTATCAAGTTTGGCAATAGTTTGACGGCATTCTaGTATAAATGGTCGAATAATCCTTGGATCAAGCCTGCTCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: FHILIIKFGNSLTAF*YKWSNNPWIKPAHR Trigger: TCTATGAGCAGGCTTGATCCAAGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTTGATAATCAGAATATGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 90 bp | GATTCAGGACTTTCTGCTAATGAATCCAAGTCTAAAGAAACTTGGTaGATAGTCTGTTCTATGTTTGGATGGGGAATAGTTTCAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: DSGLSANESKSKETW*IVCSMFGWGIVSKS Trigger: TGATTTTGAAACTATTCCCCATCCAAACATAGAACAGACTATTCACCAAGTTTCTTTAGACTTGGATTCATTAGCAGAAAGTCCTGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS-3UTR CAA 90 bp | ATGGCTGAACTTCCGAAGGACAAAATGATTGCAGAAACTGTAAATCTTTTAATGAGAGCTTCAACAATTTaGACTCTTTCTAACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MAELPKDKMIAETVNLLMRASTI*TLSNSS Trigger: AGAGCTGTTAGAAAGAGTCAAAATTGTTGAAGCTCT...CATTAAAAGATTTACAGTTTCTGCAATCATTTTGTCCTTCGGAAGTTCAGCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523594.1 |
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| CDS CAA 90 bp | AACGCCGAGGGCTCGGCAGGGCCGCGGACACCGCCGCGGCTTGGTTaGTTATTGTCGACTCCGTCTCTTCCTCCGCGGCGCATGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NAEGSAGPRTPPRLG*LLSTPSLPPRRMPG Trigger: TCCCGGCATGCGCCGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCCCTCGGCGTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 90 bp | GAGGCAACGCCGAGGGCTCGGCAGGGCCGCGGACACCGCCGCGGCTaGGTTTGTTATTGTCGACTCCGTCTCTTCCTCCGCGGCGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: EATPRARQGRGHRRG*VCYCRLRLFLRGAC Trigger: GCATGCGCCGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCCCTCGGCGTTGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 72 bp | GGCTCGGCAGGGCCGCGGACACCGCCGCGGCTTGGTTaGTTATTGTCGACTCCGTCTCTTCCTCCGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSAGPRTPPRLG*LLSTPSLPPRR Trigger: GCGCCGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CCA 72 bp | CGAGGGCTCGGCAGGGCCGCGGACACCGCCGCGGCTTaGTTTGTTATTGTCGACTCCGTCTCTTCCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGLGRAADTAAA*FVIVDSVSSSA Trigger: CGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCCCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 72 bp | GCAGGGCCGCGGACACCGCCGCGGCTTGGTTTGTTATaGTCGACTCCGTCTCTTCCTCCGCGGCGCATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGPRTPPRLGLL*STPSLPPRRMP Trigger: CGGCATGCGCCGCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 72 bp | CCGAGGGCTCGGCAGGGCCGCGGACACCGCCGCGGCTaGGTTTGTTATTGTCGACTCCGTCTCTTCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PRARQGRGHRRG*VCYCRLRLFLR Trigger: GCGGAGGAAGAGACGGAGTCGACAATAACAAACCAAGCCGCGGCGGTGTCCGCGGCCCTGCCGAGCCCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 72 bp | GGTCTTCTAGATGCACCTGAAGCACCCTCACCTGGTTaGAGATCCAGGGCAGGTAGAGACTCTGAATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLLDAPEAPSPG*RSRAGRDSECR Trigger: TCTACATTCAGAGTCTCTACCTGCCCTGGATCTCAAACCAGGTGAGGGTGCTTCAGGTGCATCTAGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000522957.1 |
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| CDS CAA 90 bp | ATTGACCACCAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACACCGGCAACGCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IDHQHLVLNSNLVFA*NGMLKVCHTGNASS Trigger: GGAGGAGGCGTTGCCGGTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTGGTGGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS TCA 72 bp | TCTTCTAAGGGACAAACTGCAGGACATAAGGGATCCTaGACAGTCAGTGGTGGAGGAGTTCTCGGTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSKGQTAGHKGS*TVSGGGVLGEV Trigger: TACCTCACCGAGAACTCCTCCACCACTGACTGTTCAGGATCCCTTATGTCCTGCAGTTTGTCCCTTAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | GGGATCCTGAACAGTCAGTGGTGGAGGAGTTCTCGGTaGGGTAGTAGTTGTAATTCCTGCTGTACTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GILNSQWWRSSR*GSSCNSCCTFH Trigger: ATGGAAAGTACAGCAGGAATTACAACTACTACCTCACCGAGAACTCCTCCACCACTGACTGTTCAGGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CCA 72 bp | CCATCTAATTTAAATTTAAAAGAAGGTCGGGTGCGGTaGCTCAAGCCCCTAATCTCAGCACTTCTGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSNLNLKEGRVR*LKPLISALLRP Trigger: CGGCCTCAGAAGTGCTGAGATTAGGGGCTTGAGCCACCGCACCCGACCTTCTTTTAAATTTAAATTAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518468.1 |
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| CDS CAA 72 bp | CTCCAGGTTGGCCATGATTGCAGCCCAGCCTTGGTGTaGAAGATGTTCATCATGTACAAGACCTTCACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQVGHDCSPALV*KMFIMYKTFTK Trigger: TTTTGTGAAGGTCTTGTACATGATGAACATCTTCAACACCAAGGCTGGGCTGCAATCATGGCCAACCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 72 bp | CAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACACGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QHLVLNSNLVFA*NGMLKVCHTSG Trigger: GCCTGACGTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518710.5 |
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| CDS CAA 72 bp | CAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACACCGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QHLVLNSNLVFA*NGMLKVCHTGN Trigger: GTTGCCGGTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517963.1 |
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| CDS CAA 90 bp | ATCTGCAGCCATGCATTCTCCTCCATTGACCACCAGCACCTGGTGTaGAATAGCAATCTTGTATTTGCTTTGAATGGCATGCTTAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICSHAFSSIDHQHLV*NSNLVFALNGMLKV Trigger: GACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTGGTGGTCAATGGAGGAGAATGCATGGCTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000517963.1 ENST00000518710.5 |
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| CDS CAA 90 bp | ATTGACCACCAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACACGTCAGGCACTGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IDHQHLVLNSNLVFA*NGMLKVCHTSGTVK Trigger: TTTCACAGTGCCTGACGTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTGGTGGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518710.5 |
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| CDS TCA 72 bp | TTTGGTATGAATTTGAACAGTCCTCCAGGTTGGCCATaGTTGCAGCCCAGCCTTGGTGTTGAAGATGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FGMNLNSPPGWP*LQPSLGVEDVH Trigger: ATGAACATCTTCAACACCAAGGCTGGGCTGCAATCATGGCCAACCTGGAGGACTGTTCAAATTCATACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | AGTAGTTGTAATTCCTGCTGTACTTTCCATCCTTGGTaGAGAAGCAGACTGTGGGGATGTCTGACTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSCNSCCTFHPW*RSRLWGCLTHR Trigger: TCTGTGAGTCAGACATCCCCACAGTCTGCTTCTTCACCAAGGATGGAAAGTACAGCAGGAATTACAACTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS GCA 72 bp | CCTTCCGTGGTGGAGGTAGAGGCGGACGAAAGCAAATaGTGTAGAAACGTTAGTTCTAAGTTCAGAATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSVVEVEADESK*CRNVSSKFRIN Trigger: GTTTATTCTGAACTTAGAACTAACGTTTCTACAGCATTTGCTTTCGTCCGCCTCTACCTCCACCACGGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518468.1 |
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| CDS CCA 72 bp | TTGCTTTGCTTGAGATTGGCAACTGAATGGCATTACTaGTTAAACTCAGAAAACCGGCAACGCCTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLCLRLATEWHY*LNSENRQRLLL Trigger: AAGGAGGAGGCGTTGCCGGTTTTCTGAGTTTAACCAGTAATGCCATTCAGTTGCCAATCTCAAGCAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000518211.1 ENST00000518710.5 |
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| CDS CAA 90 bp | CCACTTTCAGCATCTGCGGTATCTGGGGACACATGTTCCACTGACTaGGGAAATGAGGTTAACAAAGATTCGTTAGTTGTTCTAGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PLSASAVSGDTCSTD*GNEVNKDSLVVLGI Trigger: TATGCCTAGAACAACTAACGAATCTTTGTTAACCTCATTTCCCAAGTCAGTGGAACATGTGTCCCCAGATACCGCAGATGCTGAAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | AGCTCCATAAAGTTCTGGGGCTGTAGCTACATATGGTaGAGGAACAAAACTGCTACTACGCAACTTACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSIKFWGCSYIW*RNKTATTQLTD Trigger: GTCAGTAAGTTGCGTAGTAGCAGTTTTGTTCCTTCACCATATGTAGCTACAGCCCCAGAACTTTATGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000522957.1 |
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| CDS CAA 72 bp | CATGCATTCTCCTCCATTGACCACCAGCACCTGGTGTaGAATAGCAATCTTGTATTTGCTTTGAATGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: HAFSSIDHQHLV*NSNLVFALNGM Trigger: CATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTGGTGGTCAATGGAGGAGAATGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000517963.1 ENST00000518710.5 |
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| CDS CAA 72 bp | GCATCTGCGGTATCTGGGGACACATGTTCCACTGACTaGGGAAATGAGGTTAACAAAGATTCGTTAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASAVSGDTCSTD*GNEVNKDSLVV Trigger: AACAACTAACGAATCTTTGTTAACCTCATTTCCCAAGTCAGTGGAACATGTGTCCCCAGATACCGCAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 90 bp | ATTGACCACCAGCACCTGGTGTTGAATAGCAATCTTGTATTTGCTTaGAATGGCATGCTTAAGGTCTGCCACAGTTTGCACTGTAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IDHQHLVLNSNLVFA*NGMLKVCHSLHCKF Trigger: GAACTTACAGTGCAAACTGTGGCAGACCTTAAGCATGCCATTCAAAGCAAATACAAGATTGCTATTCAACACCAGGTGCTGGTGGTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CCA 72 bp | AATCCAGTCTTCCCAAACATTCTCTGTAACTATGTCTaGTTAGGCACTCCAACAGTGGAATCTTGGCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: NPVFPNILCNYV*LGTPTVESWPL Trigger: TAATGGCCAAGATTCCACTGTTGGAGTGCCTAACCAGACATAGTTACAGAGAATGTTTGGGAAGACTGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 72 bp | GTTTCTGCTTCCTTCAACGCAAGTTCAACCTCTAACTaGCATCTCGTGTCTGACAAATCAGAAACCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSASFNASSTSN*HLVSDKSETLS Trigger: ACTCAAGGTTTCTGATTTGTCAGACACGAGATGCAAGTTAGAGGTTGAACTTGCGTTGAAGGAAGCAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | GGCAACTTCATACATTTCCAATGCAAGCTGTGTCCTTaGAGCAACAGTATGAAAAACTGCAGGCATCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: GNFIHFQCKLCP*SNSMKNCRHHK Trigger: CTTATGATGCCTGCAGTTTTTCATACTGTTGCTTCAAGGACACAGCTTGCATTGGAAATGTATGAAGTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 90 bp | ACAACATATGAATATTTTCTTGTACAGACATCATGCTTGTCTCCATaGCTGAATCCACTCTTCCTTCATCTGCTGTTTCCACAGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TTYEYFLVQTSCLSP*LNPLFLHLLFPQRI Trigger: GATCCGCTGTGGAAACAGCAGATGAAGGAAGAGTGGATTCAGCAATGGAGACAAGCATGATGTCTGTACAAGAAAATATTCATATGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000522957.1 |
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| CDS CCA 72 bp | AAGTTTGGCAATAGTTTGACGGCATTCTGCTATAAATaGTCGAATAATCCTTGGATCAAGCCTGCTCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: KFGNSLTAFCYK*SNNPWIKPAHR Trigger: TCTATGAGCAGGCTTGATCCAAGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 72 bp | GTCTTCCTTAATGGTTTGTATACTGAAGTGAGAGTCTaGGGCAACAACTCTACATCTTTCCAACTGGACATT | + |
|
Preference number: 6 (lower is better) Translates to: VFLNGLYTEVRV*GNNSTSFQLDI Trigger: AATGTCCAGTTGGAAAGATGTAGAGTTGTTGCCCAAGACTCTCACTTCAGTATACAAACCATTAAGGAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 72 bp | GAATATTTTCTTGTACAGACATCATGCTTGTCTCCATaGCTGAATCCACTCTTCCTTCATCTGCTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EYFLVQTSCLSP*LNPLFLHLLFP Trigger: TGGAAACAGCAGATGAAGGAAGAGTGGATTCAGCAATGGAGACAAGCATGATGTCTGTACAAGAAAATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000522957.1 |
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| CDS CAA 90 bp | ATTTCATCAGTTTCTGCTTCCTTCAACGCAAGTTCAACCTCTAACTaGCATCTCGTGTCTGACAAATCAGAAACCTTGAGTTTTAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSVSASFNASSTSN*HLVSDKSETLSFNS Trigger: GGAATTAAAACTCAAGGTTTCTGATTTGTCAGACACGAGATGCAAGTTAGAGGTTGAACTTGCGTTGAAGGAAGCAGAAACTGATGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | ATTTCCAATGCAAGCTGTGTCCTTGAAGCAACAGTATaGAAAACTGCAGGCATCATAAGAGATTCTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: ISNASCVLEATV*KTAGIIRDSST Trigger: AGTTGAAGAATCTCTTATGATGCCTGCAGTTTTTCATACTGTTGCTTCAAGGACACAGCTTGCATTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS GCA 72 bp | CTGATTATCAAGTTTGGCAATAGTTTGACGGCATTCTaGTATAAATGGTCGAATAATCCTTGGATCAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LIIKFGNSLTAF*YKWSNNPWIKP Trigger: AGGCTTGATCCAAGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTTGATAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
||
| CDS CCA 72 bp | TTGCTTTGCTTGAGATTGGCAACTGAATGGCATTACTaGTTAAACTCAGAAAACTTGTCAAAGTCTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLCLRLATEWHY*LNSENLSKSSS Trigger: AGAACTAGACTTTGACAAGTTTTCTGAGTTTAACCAGTAATGCCATTCAGTTGCCAATCTCAAGCAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518468.1 |
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| CDS CAA 72 bp | TCATGTACAAGACCTTCACAAAAAGAACAAAGTTTCTaGGCAACTTCATACATTTCCAATGCAAGCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SCTRPSQKEQSF*ATSYISNASCV Trigger: GACACAGCTTGCATTGGAAATGTATGAAGTTGCCAAGAAACTTTGTTCTTTTTGTGAAGGTCTTGTACATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 72 bp | TTCAGTCTGACATGTAGGTTATTTGCTAGTTCTTGTTaGGCAGTGGTACACTTCTGCTTAATATCTAACAGT | + |
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Preference number: 6 (lower is better) Translates to: FSLTCRLFASSC*AVVHFCLISNS Trigger: ACTGTTAGATATTAAGCAGAAGTGTACCACTGCCAAACAAGAACTAGCAAATAACCTACATGTCAGACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS CAA 90 bp | TCCTTTAATGGCTTTCATATTCTGATTATCAAGTTTGGCAATAGTTaGACGGCATTCTGCTATAAATGGTCGAATAATCCTTGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SFNGFHILIIKFGNS*TAFCYKWSNNPWIK Trigger: CTTGATCCAAGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTTGATAATCAGAATATGAAAGCCATTAAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS TCA 72 bp | CTTTCTGCTAATGAATCCAAGTCTAAAGAAACTTGGTaGATAGTCTGTTCTATGTTTGGATGGGGAATAGTT | + |
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Preference number: 6 (lower is better) Translates to: LSANESKSKETW*IVCSMFGWGIV Trigger: AACTATTCCCCATCCAAACATAGAACAGACTATTCACCAAGTTTCTTTAGACTTGGATTCATTAGCAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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| CDS GCA 72 bp | CTATCTTTTCAGAATGCCTTGAAGATACTGAAGACATaGTCTGAGACATCAGTCTTTGATTTAACCGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: LSFQNALKILKT*SETSVFDLTVY Trigger: ATAAACGGTTAAATCAAAGACTGATGTCTCAGAGCATGTCTTCAGTATCTTCAAGGCATTCTGAAAAGATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000025008.10 ENST00000435644.6 ENST00000519912.1 ENST00000522957.1 |
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| CDS CAA 72 bp | GGCTTTCATATTCTGATTATCAAGTTTGGCAATAGTTaGACGGCATTCTGCTATAAATGGTCGAATAATCCT | + |
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Preference number: 6 (lower is better) Translates to: GFHILIIKFGNS*TAFCYKWSNNP Trigger: AGGATTATTCGACCATTTATAGCAGAATGCCGTCAAACTATTGCCAAACTTGATAATCAGAATATGAAAGCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000025008.10 ENST00000435644.6 |
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