Pregenerated sensors for RB1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000231473Ensembl transcript IDs: ENST00000433480.2, ENST00000436963.1, ENST00000669900.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGAGGGGGTGGTTCTGGGTAGAAGCACGTCCGGGCCGCGCCGGATaGCTCCTGGAAGGCGCCTGGACCCACGCCAGGTTTCCCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: WRGWFWVEARPGRAG*LLEGAWTHARFPSL Trigger: TAAACTGGGAAACCTGGCGTGGGTCCAGGCGCCTTCCAGGAGGCATCCGGCGCGGCCCGGACGTGCTTCTACCCAGAACCACCCCCTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS CCA 90 bp | GTAGAAGCACGTCCGGGCCGCGCCGGATGCCTCCTGGAAGGCGCCTaGACCCACGCCAGGTTTCCCAGTTTAATTCCTCATGACTTAGCG | + |
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Preference number: 5 (lower is better) Translates to: VEARPGRAGCLLEGA*THARFPSLIPHDLA Trigger: CGCTAAGTCATGAGGAATTAAACTGGGAAACCTGGCGTGGGTCCAGGCGCCTTCCAGGAGGCATCCGGCGCGGCCCGGACGTGCTTCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS TCA 90 bp | TTGCTTCAGTCACTGGCCCTGGCCCTTGCCACTGCCAGGCAGAGTTaGGCCTGCACTTCAGAGACTGTCTGGCTTCGTGGACATGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: LLQSLALALATARQS*ACTSETVWLRGHVA Trigger: GGCTACATGTCCACGAAGCCAGACAGTCTCTGAAGTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGACTGAAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS GCA 90 bp | GGCCCTTGCCACTGCCAGGCAGAGTTGAGCCTGCAAGCCATGACCTaGTTGAAGGTTCTTCCTGCCTTAGACCTTGCTCAGCTGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GPCHCQAELSLQAMT*LKVLPALDLAQLLQ Trigger: CTGGAGCAGCTGAGCAAGGTCTAAGGCAGGAAGAACCTTCAAGCAGGTCATGGCTTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS GCA 90 bp | GCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCCTGGCCCTTaGCACTGCCAGGCAGAGTTGAGCCTGCAAGCCATGACCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: AVIWQFVASVTGPGP*HCQAELSLQAMTCL Trigger: CAAGCAGGTCATGGCTTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS GCA 90 bp | GCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCCTGGCCCTTaGCACTGCCAGGCAGAGTTGAGCCTGCACTTCAGAGACTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: AVIWQFVASVTGPGP*HCQAELSLHFRDCL Trigger: CAGACAGTCTCTGAAGTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS CCA 90 bp | TTGAGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCCTaGCCCTTGCCACTGCCAGGCAGAGTTGAGCCTGCAAGCCATGAC | + |
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Preference number: 5 (lower is better) Translates to: LSCSHLAVCCFSHWP*PLPLPGRVEPASHD Trigger: GTCATGGCTTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS GCA 90 bp | GTGGCTTTGTGCATTGGCTTGAGCTGCAGTCATCTGGCAGTTTGTTaGTTCAGTCACTGGCCCTGGCCCTTGCCACTGCCAGGCAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: VALCIGLSCSHLAVC*FSHWPWPLPLPGRV Trigger: AACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS GCA 90 bp | AGAATTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTGGCTTGAGCTaGAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RISSLVAVALCIGLS*SHLAVCCFSHWPWP Trigger: GGGCCAGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 90 bp | TGCCAGGCAGAGTTGAGCCTGCACTTCAGAGACTGTCTGGCTTCGTaGACATGTAGCCTGTGTAGTCACTTAGTTCTCCATGTTAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: CQAELSLHFRDCLAS*TCSLCSHLVLHVRK Trigger: CTTTCTAACATGGAGAACTAAGTGACTACACAGGCTACATGTCCACGAAGCCAGACAGTCTCTGAAGTGCAGGCTCAACTCTGCCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS TCA 90 bp | ATGGAAGAATTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTGGCTTaGGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: MEEFPLLLQWLCALA*AAVIWQFVASVTGP Trigger: AGGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAATTCTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS GCA 90 bp | GGGAGAAATCGACACACTTGGAAATGGAAGAATTTCCTCTCTTGTTaGAGTGGCTTTGTGCATTGGCTTGAGCTGCAGTCATCTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GRNRHTWKWKNFLSC*SGFVHWLELQSSGS Trigger: ACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAATTCTTCCATTTCCAAGTGTGTCGATTTCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 90 bp | TGGAAATGGAAGAATTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTaGCTTGAGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: WKWKNFLSCCSGFVH*LELQSSGSLLLQSL Trigger: CAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAATTCTTCCATTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 90 bp | CTTGAAGGTTCTTCCTGCCTTAGACCTTGCTCAGCTGCTCCAGGATaGGGGGATTTACATCACAGCACAACTGTATTTTATTCACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LEGSSCLRPCSAAPG*GDLHHSTTVFYSQH Trigger: ATGCTGTGAATAAAATACAGTTGTGCTGTGATGTAAATCCCCTCATCCTGGAGCAGCTGAGCAAGGTCTAAGGCAGGAAGAACCTTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 90 bp | AGGGTTTGTGCATCAGACAAAGGTTGGGATTACAAGGGTTGTAGATaGACGAGATGTGCCTTTAGTTACAGCCACTTCTTGAGTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: RVCASDKGWDYKGCR*TRCAFSYSHFLSAV Trigger: TACAGCACTCAAGAAGTGGCTGTAACTAAAGGCACATCTCGTTCATCTACAACCCTTGTAATCCCAACCTTTGTCTGATGCACAAACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 90 bp | AGGGTTGTAGATGAACGAGATGTGCCTTTAGTTACAGCCACTTCTTaGGTGCTGTATGTCTATGTGACTCCTGATGACTTGGTCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RVVDERDVPLVTATS*VLYVYVTPDDLVKE Trigger: TTCTTTGACCAAGTCATCAGGAGTCACATAGACATACAGCACTCAAGAAGTGGCTGTAACTAAAGGCACATCTCGTTCATCTACAACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 90 bp | ATAGTAGGAGAATCAATCATATTCTCTGCACTTAGGAGTGTGGTTTaGTGGCATGGAGAGAAGGTCAGTGTAGCAGAAGTAGTACAGTAT | + |
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Preference number: 5 (lower is better) Translates to: IVGESIIFSALRSVV*WHGEKVSVAEVVQY Trigger: ATACTGTACTACTTCTGCTACACTGACCTTCTCTCCATGCCACCAAACCACACTCCTAAGTGCAGAGAATATGATTGATTCTCCTACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS TCA 90 bp | TTACCTTCCGCTCATCTTCACCCAAAACATTCTGATAGCCCTTATTaGTTAGAAGAGGAGGAGAATGCATTAAGTTTAGTTGGCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: LPSAHLHPKHSDSPY*LEEEENALSLVGRN Trigger: ATTTCTGCCAACTAAACTTAATGCATTCTCCTCCTCTTCTAATCAATAAGGGCTATCAGAATGTTTTGGGTGAAGATGAGCGGAAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS CCA 72 bp | CCCGTTAAGTGCACCCCGGCCTGGAGGGGGTGGTTCTaGGTAGAAGCACGTCCGGGCCGCGCCGGATGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVKCTPAWRGWF*VEARPGRAGCL Trigger: GAGGCATCCGGCGCGGCCCGGACGTGCTTCTACCCAGAACCACCCCCTCCAGGCCGGGGTGCACTTAACGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS GCA 72 bp | CCGCCCAAGGAGGGAGAGTGGCGCTCCCGCCGAGGGTaGACTAGCCAGATATTCCCTGCGGGGCCCGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PPKEGEWRSRRG*TSQIFPAGPES Trigger: ACTCTCGGGCCCCGCAGGGAATATCTGGCTAGTGCACCCTCGGCGGGAGCGCCACTCTCCCTCCTTGGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS GCA 72 bp | TGGTTCTGGGTAGAAGCACGTCCGGGCCGCGCCGGATaGCTCCTGGAAGGCGCCTGGACCCACGCCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: WFWVEARPGRAG*LLEGAWTHARF Trigger: AAACCTGGCGTGGGTCCAGGCGCCTTCCAGGAGGCATCCGGCGCGGCCCGGACGTGCTTCTACCCAGAACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS CCA 72 bp | GCCGACTTTGCAAAACGGATTGGGCGGGATGAGAGGTaGGGGGCGCCGCCCAAGGAGGGAGAGTGGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ADFAKRIGRDER*GAPPKEGEWRS Trigger: GGAGCGCCACTCTCCCTCCTTGGGCGGCGCCCCCCACCTCTCATCCCGCCCAATCCGTTTTGCAAAGTCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 72 bp | CGTCCGGGCCGCGCCGGATGCCTCCTGGAAGGCGCCTaGACCCACGCCAGGTTTCCCAGTTTAATTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RPGRAGCLLEGA*THARFPSLIPH Trigger: ATGAGGAATTAAACTGGGAAACCTGGCGTGGGTCCAGGCGCCTTCCAGGAGGCATCCGGCGCGGCCCGGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS TCA 72 bp | CTGGACCCACGCCAGGTTTCCCAGTTTAATTCCTCATaGCTTAGCGTCCCAGCCCGCGCACCGACCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LDPRQVSQFNSS*LSVPARAPTSA Trigger: GGCGCTGGTCGGTGCGCGGGCTGGGACGCTAAGTCATGAGGAATTAAACTGGGAAACCTGGCGTGGGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000436963.1 |
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| CDS CAA 72 bp | GTCACTGGCCCTGGCCCTTGCCACTGCCAGGCAGAGTaGAGCCTGCACTTCAGAGACTGTCTGGCTTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: VTGPGPCHCQAE*SLHFRDCLASW Trigger: CCACGAAGCCAGACAGTCTCTGAAGTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS TCA 72 bp | TCACTGGCCCTGGCCCTTGCCACTGCCAGGCAGAGTTaGGCCTGCACTTCAGAGACTGTCTGGCTTCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLALALATARQS*ACTSETVWLRG Trigger: TCCACGAAGCCAGACAGTCTCTGAAGTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGGGCCAGGGCCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS CAA 72 bp | GATAGGGATGAGGCCCACAGTCACCCACCAGACTCTTaGTATAGCCCCGTTAAGTGCACCCCGGCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DRDEAHSHPPDS*YSPVKCTPAWR Trigger: CCTCCAGGCCGGGGTGCACTTAACGGGGCTATACAAAGAGTCTGGTGGGTGACTGTGGGCCTCATCCCTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS CAA 90 bp | CCTTGCCACTGCCAGGCAGAGTTGAGCCTGCAAGCCATGACCTGCTaGAAGGTTCTTCCTGCCTTAGACCTTGCTCAGCTGCTCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: PCHCQAELSLQAMTC*KVLPALDLAQLLQD Trigger: ATCCTGGAGCAGCTGAGCAAGGTCTAAGGCAGGAAGAACCTTCAAGCAGGTCATGGCTTGCAGGCTCAACTCTGCCTGGCAGTGGCAAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS GCA 72 bp | CACTGCCAGGCAGAGTTGAGCCTGCAAGCCATGACCTaGTTGAAGGTTCTTCCTGCCTTAGACCTTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HCQAELSLQAMT*LKVLPALDLAQ Trigger: CTGAGCAAGGTCTAAGGCAGGAAGAACCTTCAAGCAGGTCATGGCTTGCAGGCTCAACTCTGCCTGGCAGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS CAA 72 bp | TGCCAGGCAGAGTTGAGCCTGCAAGCCATGACCTGCTaGAAGGTTCTTCCTGCCTTAGACCTTGCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CQAELSLQAMTC*KVLPALDLAQL Trigger: CAGCTGAGCAAGGTCTAAGGCAGGAAGAACCTTCAAGCAGGTCATGGCTTGCAGGCTCAACTCTGCCTGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433480.2 |
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| CDS CCA 72 bp | AATGAAACAATTCGTTGTCCCCACTTGGAGGTGCAGTaGTGGTGGTGGGGAGAACTAGGGAAGGGTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: NETIRCPHLEVQ*WWWGELGKGLC Trigger: GCACAAACCCTTCCCTAGTTCTCCCCACCACCACCACTGCACCTCCAAGTGGGGACAACGAATTGTTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CAA 90 bp | ATGGGCAATAACAGTGTCTATCAGCGCTCCAAGTTTGTTTTTGTTTaGGCCGACTTTGCAAAACGGATTGGGCGGGATGAGAGGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: MGNNSVYQRSKFVFV*ADFAKRIGRDERWG Trigger: CCCCCACCTCTCATCCCGCCCAATCCGTTTTGCAAAGTCGGCCAAAACAAAAACAAACTTGGAGCGCTGATAGACACTGTTATTGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS GCA 72 bp | TCTCTTGTTGCAGTGGCTTTGTGCATTGGCTTGAGCTaGAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVAVALCIGLS*SHLAVCCFSHW Trigger: CCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 72 bp | GAGTTGAGCCTGCACTTCAGAGACTGTCTGGCTTCGTaGACATGTAGCCTGTGTAGTCACTTAGTTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ELSLHFRDCLAS*TCSLCSHLVLH Trigger: ATGGAGAACTAAGTGACTACACAGGCTACATGTCCACGAAGCCAGACAGTCTCTGAAGTGCAGGCTCAACTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS CAA 90 bp | AATGGAAGAATTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTGGCTaGAGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGTCACTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NGRISSLVAVALCIG*SCSHLAVCCFSHWP Trigger: GGGCCAGTGACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAATTCTTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 72 bp | TTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTGGCTTaGGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FPLLLQWLCALA*AAVIWQFVASV Trigger: GACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 72 bp | GATGAAGATGATAATATTCACAATGGCGGGAAGGAGTaGAGTCTGAGCCATGACCTGCTTGAAGGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: DEDDNIHNGGKE*SLSHDLLEGSS Trigger: GGAAGAACCTTCAAGCAGGTCATGGCTCAGACTCCACTCCTTCCCGCCATTGTGAATATTATCATCTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669900.1 |
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| CDS CAA 72 bp | AACAGTGTCTATCAGCGCTCCAAGTTTGTTTTTGTTTaGGCCGACTTTGCAAAACGGATTGGGCGGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: NSVYQRSKFVFV*ADFAKRIGRDE Trigger: CTCATCCCGCCCAATCCGTTTTGCAAAGTCGGCCAAAACAAAAACAAACTTGGAGCGCTGATAGACACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CAA 72 bp | ATTTCCTCTCTTGTTGCAGTGGCTTTGTGCATTGGCTaGAGCTGCAGTCATCTGGCAGTTTGTTGCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ISSLVAVALCIG*SCSHLAVCCFS Trigger: ACTGAAGCAACAAACTGCCAGATGACTGCAGCTCAAGCCAATGCACAAAGCCACTGCAACAAGAGAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 72 bp | TCTTCCTGCCTTAGACCTTGCTCAGCTGCTCCAGGATaGGGGGATTTACATCACAGCACAACTGTATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SSCLRPCSAAPG*GDLHHSTTVFY Trigger: ATAAAATACAGTTGTGCTGTGATGTAAATCCCCTCATCCTGGAGCAGCTGAGCAAGGTCTAAGGCAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS TCA 72 bp | GCATCAGACAAAGGTTGGGATTACAAGGGTTGTAGATaGACGAGATGTGCCTTTAGTTACAGCCACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ASDKGWDYKGCR*TRCAFSYSHFL Trigger: CAAGAAGTGGCTGTAACTAAAGGCACATCTCGTTCATCTACAACCCTTGTAATCCCAACCTTTGTCTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 72 bp | AAACCATCTCTTTCCTTCTCAGTTGACGAGTTCAGATaGGCAATAACAGTGTCTATCAGCGCTCCAAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KPSLSFSVDEFR*AITVSISAPSL Trigger: CAAACTTGGAGCGCTGATAGACACTGTTATTGCCCATCTGAACTCGTCAACTGAGAAGGAAAGAGATGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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| CDS CCA 72 bp | GACCAAGCACAAACCCCACTTCTGGTTTCCTTGGTTTaGGGCTGTCTCATGTTAATGATATTTTTCATGAGA | + |
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Preference number: 6 (lower is better) Translates to: DQAQTPLLVSLV*GCLMLMIFFMR Trigger: TCTCATGAAAAATATCATTAACATGAGACAGCCCCAAACCAAGGAAACCAGAAGTGGGGTTTGTGCTTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433480.2 ENST00000669900.1 |
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