RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASSF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000123094

Ensembl transcript IDs: ENST00000282884.13, ENST00000381352.7, ENST00000405154.6, ENST00000535907.5, ENST00000537946.5, ENST00000538081.5, ENST00000538365.2, ENST00000539545.1, ENST00000541218.5, ENST00000541490.5, ENST00000542004.5, ENST00000542315.5, ENST00000542865.5, ENST00000545413.1, ENST00000611440.1, ENST00000615708.4

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTaGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGT +
Preference number: 1 (lower is better)
Translates to: LGHLCSVNQQCMDGV*QHAHGHNHTICNVS
Trigger: ACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR GCA 90 bp TGTGATACTCTGCTGGGAACCCAAGACTACTACAAGTTGCTAGGATaGTGCTTGTCCTTACTTAAAGTTATTAGGTTAATTCTGATAACA +
Preference number: 1 (lower is better)
Translates to: CDTLLGTQDYYKLLG*CLSLLKVIRLILIT
Trigger: TGTTATCAGAATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAGAGTATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR TCA 90 bp ATCCTTGCTAAAAAGTACCTAGGTTTAACCTCCTTTCCATCTAAGTaGCTGGAAGAAACCACAATGGTCCATAATATGCAGAGCAAATTA +
Preference number: 1 (lower is better)
Translates to: ILAKKYLGLTSFPSK*LEETTMVHNMQSKL
Trigger: TAATTTGCTCTGCATATTATGGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGAGGTTAAACCTAGGTACTTTTTAGCAAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 90 bp GATACTCTGCTGGGAACCCAAGACTACTACAAGTTGCTAGGATGCTaGTTGTCCTTACTTAAAGTTATTAGGTTAATTCTGATAACAATT +
Preference number: 1 (lower is better)
Translates to: DTLLGTQDYYKLLGC*LSLLKVIRLILITI
Trigger: AATTGTTATCAGAATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAGAGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CCA 90 bp TCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATaGTGTGTACACCAACAGATCATACATATGAAGCGGGTTATTTTA +
Preference number: 1 (lower is better)
Translates to: SIICRANYVQAIPYP*CVHQQIIHMKRVIL
Trigger: TAAAATAACCCGCTTCATATGTATGATCTGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 90 bp TGCTCTAGACGGACAATTTCCTCTTCAAGGTTGGAATTATACTTTTaGTCCCAAAATCTTATTTCTATTTCATTAGATTCCAGCTGTTTC +
Preference number: 1 (lower is better)
Translates to: CSRRTISSSRLELYF*SQNLISISLDSSCF
Trigger: GAAACAGCTGGAATCTAATGAAATAGAAATAAGATTTTGGGAGCAAAAGTATAATTCCAACCTTGAAGAGGAAATTGTCCGTCTAGAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR GCA 90 bp CAGAATTCTTCCTCCTCAATTTCTACATCGTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCCTCTTCAAGGTTGGAATTATACTTT +
Preference number: 1 (lower is better)
Translates to: QNSSSSISTSFLLIF*SRRTISSSRLELYF
Trigger: AAAGTATAATTCCAACCTTGAAGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGAGGAAGAATTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR TCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCACTCATATCTTCAGTTaGGGTCCGCCACTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWATHIFS*GPPLSC
Trigger: GCAGCTAAGTGGCGGACCTCAACTGAAGATATGAGT...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCCATGCCCAGCCCCTTTaGCCATTTTTAATTGGATTA +
Preference number: 2 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTHAQPL*PFLIGL
Trigger: TAATCCAATTAAAAATGGTCAAAGGGGCTGGGCATG...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR CCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCAGCCTCCCGAGTAGCTaGGATTACAGGCGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSLPSS*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGCTACTCGGGAGGCT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCAAAGGCAATGCACAATaGGAACTGTCCATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFKGNAQ*ELSICP
Trigger: TGGGCAGATGGACAGTTCCCATTGTGCATTGCCTTT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCACCTTTTCATTTTGGTaGTCGTTTCCTTTGTTGTGC +
Preference number: 2 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTTFSFW*SFPLLC
Trigger: GCACAACAAAGGAAACGATCACCAAAATGAAAAGGT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAACCTTGGTACCTCTGTTaGGTCTCCTCCCTAAAGACA +
Preference number: 2 (lower is better)
Translates to: ISNAWMESGNMHTVIITQPWYLC*VSSLKT
Trigger: TGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGG...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTGCATGGATGGAGTCTaGCAACATGCACACGGTCAT +
Preference number: 2 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDCMDGV*QHAHGH
Trigger: ATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCACAAGAAAGGGACTATaGACACTATGTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFTRKGL*TLCPQA
Trigger: TGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCGTTTCACAAAACAAATaGAAGTGGCTTCCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFVSQNK*KWLPVE
Trigger: CTCCACAGGAAGCCACTTGCATTTGTTTTGTGAAAC...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATCAGTGCACAGGGTATaGCTCCAAGTGGTATGCAAT +
Preference number: 2 (lower is better)
Translates to: ISNAWMESGNMHTVIITQSVHRV*LQVVCN
Trigger: ATTGCATACCACTTGGAGCCATACCCTGTGCACTGA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR GCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTACCAGATAACGGTTTaGAAATATTTTCTCCCAATC +
Preference number: 2 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTYQITV*KYFLPI
Trigger: GATTGGGAGAAAATATTTGCAAACCGTTATCTGGTA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCCTTGGTACCTCTGTTaGGTCTCCTCCCTAAAGACA +
Preference number: 2 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFPWYLC*VSSLKT
Trigger: TGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTGGAAGAAACCACAATaGTCCATAATATGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFWKKPQ*SIICRA
Trigger: TGCTCTGCATATTATGGACCATTGTGGTTTCTTCCA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCGTAAAAATGGCTAAGTaGTGTCTGACTGAATCTGTC +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFVKMAK*CLTESV
Trigger: GACAGATTCAGTCAGACACCACTTAGCCATTTTTAC...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCCCAAAGTTGCCTTCATaGATAAGACATAGCTCTATT +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFPKLPS*IRHSSI
Trigger: AATAGAGCTATGTCTTATGCATGAAGGCAACTTTGG...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCAAGTTGCTAGGATGCTaGTTGTCCTTACTTAAAGTT +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFKLLGC*LSLLKV
Trigger: AACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATCAGCAATGCATGGATaGAGTCTGGCAACATGCACA +
Preference number: 2 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTSAMHG*SLATCT
Trigger: TGTGCATGTTGCCAGACTCCATCCATGCATTGCTGA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCAACCCCATGCCTGTTTaGATACATACTTACCAATTA +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFNPMPV*IHTYQL
Trigger: TAATTGGTAAGTATGTATCCAAACAGGCATGGGGTT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 90 bp AGCAGATGTAACCTAACAGGTGTGAGGTGGTATCTCATTGTGGCTTaGATTTGCATTTCCCTGCTGATCAGTGATGTTGAGCACTTTTTC +
Preference number: 2 (lower is better)
Translates to: SRCNLTGVRWYLIVA*ICISLLISDVEHFF
Trigger: GAAAAAGTGCTCAACATCACTGATCAGCAGGGAAATGCAAATCAAAGCCACAATGAGATACCACCTCACACCTGTTAGGTTACATCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR TCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTTCCTTTCCATCTAAGTaGCTGGAAGAAACCACAATG +
Preference number: 2 (lower is better)
Translates to: MKLSERLTVILCWEPKTTSFPSK*LEETTM
Trigger: CATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGA...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCGCTTTGCATTATAGCTaGTGGACAAAAATATCAACA +
Preference number: 2 (lower is better)
Translates to: KELLQLSGSHCPGIESLFALHYS*WTKIST
Trigger: TGTTGATATTTTTGTCCAGCAGCTATAATGCAAAGC...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAACCTTGGTACCTCTGTTaGGTCTCCTCCCTAAAGACA +
Preference number: 2 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQPWYLC*VSSLKT
Trigger: TGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGG...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACATCTGTTATGCTCTGTaGCCACACGTATATTTGGAA +
Preference number: 2 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDICYAL*PHVYLE
Trigger: TTCCAAATATACGTGTGGCCACAGAGCATAACAGAT...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTTTCCATCTAAGTGACTaGAAGAAACCACAATGGTCC +
Preference number: 2 (lower is better)
Translates to: MKLSERLTVILCWEPKTTFHLSD*KKPQWS
Trigger: GGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAA...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHASSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTCACCTAATTAAGCAATaGCTAGGACAGTTTCACAAA +
Preference number: 2 (lower is better)
Translates to: MKLSERLTVILCWEPKTTHLIKQ*LGQFHK
Trigger: TTTGTGAAACTGTCCTAGCCATTGCTTAATTAGGTG...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 90 bp TGGACAAAAATATCAACACTGTTGATGTGTGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATG +
Preference number: 2 (lower is better)
Translates to: WTKISTLLMCENTVS*FFSISAQGMAPSGM
Trigger: CATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTCACACATCAACAGTGTTGATATTTTTGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR CAA 90 bp GAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTACAAGTaGCTAGGATGCTGCTTGTCCTTACTTAAAGTTATTAGGTTAATT +
Preference number: 2 (lower is better)
Translates to: EVNCDTLLGTQDYYK*LGCCLSLLKVIRLI
Trigger: AATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 90 bp TCTGTCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTTTGCTTAAACTCAGTTTCTTTACCT +
Preference number: 2 (lower is better)
Translates to: SVCRRISFFNSSAVV*QLFSTFCLNSVSLP
Trigger: AGGTAAAGAAACTGAGTTTAAGCAAAAGGTGCTGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR GCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACAGTGTAAATCAGCAATaGATGGATGGAGTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: KPQWSIICRANYVQAIPYSVNQQ*MDGVWQ
Trigger: TTGCCAGACTCCATCCATGCATTGCTGATTTACACT...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR TCA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: SISTSFLLIFCSRRTISSFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR TCA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTTCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 2 (lower is better)
Translates to: SISTSFLLIFCSRRTISSSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR CAA 90 bp ACTCTGCTGGGAACCCAAGACTACTACAAGTTGCTAGGATGCTGCTaGTCCTTACTTAAAGTTATTAGGTTAATTCTGATAACAATTTAT +
Preference number: 2 (lower is better)
Translates to: TLLGTQDYYKLLGCC*SLLKVIRLILITIY
Trigger: ATAAATTGTTATCAGAATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR TCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTGGCTAAGTGGTGTCTaGCTGAATCTGTCTAAATAT +
Preference number: 2 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSWLSGV*LNLSKY
Trigger: ATATTTAGACAGATTCAGTCAGACACCACTTAGCCA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACGGCCACACGTATATTTaGAAATATTGTAAAGGAACG +
Preference number: 2 (lower is better)
Translates to: KPQWSIICRANYVQAIPYGHTYI*KYCKGT
Trigger: CGTTCCTTTACAATATTTCCAAATATACGTGTGGCC...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 90 bp CATTCACTAAACCAAAGTCAGTCAAATGTGTTAAAACATCCAAAGTaGCCTTCATGCATAAGACATAGCTCTATTGTTACCATGGCATTA +
Preference number: 2 (lower is better)
Translates to: HSLNQSQSNVLKHPK*PSCIRHSSIVTMAL
Trigger: TAATGCCATGGTAACAATAGAGCTATGTCTTATGCATGAAGGCAACTTTGGATGTTTTAACACATTTGACTGACTTTGGTTTAGTGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTGCTGTGGAAGCAAGTaGTTACATGTTCTTGTTATA +
Preference number: 2 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSCCGSK*LHVLVI
Trigger: TATAACAAGAACATGTAAGCACTTGCTTCCACAGCA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTGCTTTGCATTATAGCTaGTGGACAAAAATATCAACA +
Preference number: 2 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSALHYS*WTKIST
Trigger: TGTTGATATTTTTGTCCAGCAGCTATAATGCAAAGC...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR GCA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 2 (lower is better)
Translates to: SISTSFLLIFCSRRTISSLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 3 (lower is better)
Translates to: SLASVHRVWLQVVCNLGESLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 3 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDSLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCCCCACTTGTTCATTTTaGCTTTTCTTGCCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTPTCSF*LFLPEL
Trigger: AAGCTCAGGCAAGAAAAGCAAAAATGAACAAGTGGG...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
3UTR-3UTR CAA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 3 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNSLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTGGAAGTTTACTGTCCTaGGTACCTCTGTTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFGSLLS*VPLLGL
Trigger: GAGACCCAACAGAGGTACCAAGGACAGTAAACTTCC...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCGAAATTCTGATGAAGTaGTCAGAGAGGTTAACTGTG +
Preference number: 3 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAEILMK*SERLTV
Trigger: CACAGTTAACCTCTCTGACAACTTCATCAGAATTTC...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCGATTGTTTTGTCTTTTaGATACAGCTGATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: KELLQLSGSHCPGIESLFDCFVF*IQLMAF
Trigger: GAAGGCCATCAGCTGTATCAAAAAGACAAAACAATC...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTCTCTGAAGACCATTTaGCTCTTATTCACAGAGAAA +
Preference number: 3 (lower is better)
Translates to: KELLQLSGSHCPGIESLFSLKTI*LLFTEK
Trigger: TTTCTCTGTGAATAAGAGCAAAATGGTCTTCAGAGA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGGAAGTTTACTGTCCTaGGTACCTCTGTTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQGSLLS*VPLLGL
Trigger: GAGACCCAACAGAGGTACCAAGGACAGTAAACTTCC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: ISNAWMESGNMHTVIITQKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR CCA 72 bp TCATTGGCACAAATCAAAAAGGAAGTTTACTGTCCTTaGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGAT +
Preference number: 3 (lower is better)
Translates to: SLAQIKKEVYCP*YLCWVSSLKTD
Trigger: ATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTCCTTTTTGATTTGTGCCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
3UTR CCA 72 bp TGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATaGTGTGTACACCAACAGATCATACATATGAAGCGG +
Preference number: 3 (lower is better)
Translates to: CRANYVQAIPYP*CVHQQIIHMKR
Trigger: CCGCTTCATATGTATGATCTGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 3 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTTGCTAGGATGCTGCTaGTCCTTACTTAAAGTTATT +
Preference number: 3 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDLLGCC*SLLKVI
Trigger: AATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CCA 72 bp TTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTaGCAACATGCACACGGTCATAATCACACAATATGT +
Preference number: 3 (lower is better)
Translates to: LCSVNQQCMDGV*QHAHGHNHTIC
Trigger: ACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR CCA 72 bp CCTCCTTTCCATCTAAGTGACTGGAAGAAACCACAATaGTCCATAATATGCAGAGCAAATTATGTGCAAGCA +
Preference number: 3 (lower is better)
Translates to: PPFHLSDWKKPQ*SIICRANYVQA
Trigger: TGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 3 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR-3UTR CAA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTAATGGCAAGATCAATTaGATAACTCCAAGAACCCAA +
Preference number: 3 (lower is better)
Translates to: MKLSERLTVILCWEPKTTNGKIN*ITPRTQ
Trigger: TTGGGTTCTTGGAGTTATCAAATTGATCTTGCCATT...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR-3UTR CAA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCAATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 3 (lower is better)
Translates to: SADGLASSTHLLLFCSYSMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 3 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 72 bp CTGGGAACCCAAGACTACTACAAGTTGCTAGGATGCTaGTTGTCCTTACTTAAAGTTATTAGGTTAATTCTG +
Preference number: 3 (lower is better)
Translates to: LGTQDYYKLLGC*LSLLKVIRLIL
Trigger: CAGAATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 72 bp CTGCTGGGAACCCAAGACTACTACAAGTTGCTAGGATaGTGCTTGTCCTTACTTAAAGTTATTAGGTTAATT +
Preference number: 3 (lower is better)
Translates to: LLGTQDYYKLLG*CLSLLKVIRLI
Trigger: AATTAACCTAATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR TCA 72 bp AAAAAGTACCTAGGTTTAACCTCCTTTCCATCTAAGTaGCTGGAAGAAACCACAATGGTCCATAATATGCAG +
Preference number: 3 (lower is better)
Translates to: KKYLGLTSFPSK*LEETTMVHNMQ
Trigger: CTGCATATTATGGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGAGGTTAAACCTAGGTACTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 72 bp TCCTCCTCAATTTCTACATCGTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCCTCTTCAAGGTTGGAA +
Preference number: 3 (lower is better)
Translates to: SSSISTSFLLIF*SRRTISSSRLE
Trigger: TTCCAACCTTGAAGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
3UTR-3UTR CAA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGATAAAAACGAAGGCTTaGCATTATAGCTGCTGGACA +
Preference number: 3 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMIKTKA*HYSCWT
Trigger: TGTCCAGCAGCTATAATGCAAAGCCTTCGTTTTTAT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
3UTR GCA 72 bp ATAATGAGTTGGATATTGACAGTGTTTTTCGTGGTATaGCAAGGCATCTCTGAAACTCCTAATTGCAAAGTT +
Preference number: 3 (lower is better)
Translates to: IMSWILTVFFVV*QGISETPNCKV
Trigger: AACTTTGCAATTAGGAGTTTCAGAGATGCCTTGGCATACCACGAAAAACACTGTCAATATCCAACTCATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR GCA 72 bp ATAGTTTGGATATTAAACCCTTACCAGATAACGGTTTaGAAATATTTTCTCCCAATCTACAGTCCACCTTTT +
Preference number: 3 (lower is better)
Translates to: IVWILNPYQITV*KYFLPIYSPPF
Trigger: AAAAGGTGGACTGTAGATTGGGAGAAAATATTTGCAAACCGTTATCTGGTAAGGGTTTAATATCCAAACTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCAGCCTCCCGAGTAGCTaGGATTACAGGCGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTSLPSS*DYRRVP
Trigger: TGGCACGCGCCTGTAATCCCAGCTACTCGGGAGGCT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGTCACTCAAGGTCCCTaGGAGTGGTCATCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTVTQGP*EWSSGC
Trigger: ACACCCTGATGACCACTCTCAGGGACCTTGAGTGAC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEGELPR*TRSLQG
Trigger: TCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCC...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCATGGTCTCAGTCTCCTaGCCTTGTGATTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTMVSVS*PCDSPT
Trigger: GGTGGGAGAATCACAAGGTCAGGAGACTGAGACCAT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTGHVSS*RNTEWR
Trigger: TCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGTCAGTTTCGCAACTaGGCCGCCCCCGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSQFRN*AAPAGR
Trigger: GCGGCCTGCGGGGGCGGCGCAGTTGCGAAACTGACT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405154.6
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCAGGCCTCTATTTCAATaGGCTCCGCTGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTRPLFQ*APLAKR
Trigger: CCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAAAGTGGGTCGCTCACTaGGAGACGGCCCAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQKWVAH*ETAQFV
Trigger: GACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTRLCWP*MSISPL
Trigger: CAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNGELPR*TRSLQG
Trigger: TCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNGELPR*TRSLQG
Trigger: TCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCC...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCACTCAGTTTCGCAACTaGGCCGCCCCCGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSTQFRN*AAPAGR
Trigger: GCGGCCTGCGGGGGCGGCGCAGTTGCGAAACTGAGT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTGCTGGATGAACTGCTaGAGATTGACTTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTCWMNC*RLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCGTCACTCAAGGTCCCTaGGAGTGGTCATCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVVTQGP*EWSSGC
Trigger: ACACCCTGATGACCACTCTCAGGGACCTTGAGTGAC...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTTCCTCATTGACCTGTaGCTCTTGAACTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTFLIDL*LLNFPL
Trigger: CAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCGGACCCAGACTGGAATaGTGCCTCCCTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFGPRLE*CLPFNV
Trigger: GACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCC...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAAGTGGGTCGCTCACTaGGAGACGGCCCAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFKWVAH*ETAQFV
Trigger: GACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GTTTCTCAATGGATTGAAGCTTCTCTGTCTGCAGACGGATTAGCTTCTTCAACTAAGTGGGTCGCTCACTaGGAGACGGCCCAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: VSQWIEASLSADGLASSTKWVAH*ETAQFV
Trigger: GACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTT...AGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTCGAGCCACACTGTCTaGAGTGGGTCGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNSSHTV*SGSLTE
Trigger: CTCAGTGAGCGACCCACTTCAGACAGTGTGGCTCGA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTTGACCTGTGCCTCTTaGACTTCCCGTTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTLTCAS*TSRCNF
Trigger: AAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTCQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQGELPR*TRSLQG
Trigger: TCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR GCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQRLLGS*RDEPGR
Trigger: GCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCGGTCCGCCACTTAGCTaGACTAGAAAAGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAGPPLS*TRKGNS
Trigger: AGAGTTGCCTTTTCTAGTGCAGCTAAGTGGCGGACC...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTGCTGGATGAACTGCTaGAGATTGACTTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFCWMNC*RLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTTCAATGGGCTCCGCTaGCAAAACGGTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTFNGLR*QNGNFC
Trigger: ACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCGAATGCGGAGATTACTaGGGAGCTGCCGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVECGDY*GAAEMN
Trigger: GTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTC...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCCTAACAGGTGTGAGGTaGTATCTCATTGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTLTGVR*YLIVAL
Trigger: CAAAGCCACAATGAGATACCACCTCACACCTGTTAG...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGTCACTCAAGGTCCCTaGGAGTGGTCATCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNVTQGP*EWSSGC
Trigger: ACACCCTGATGACCACTCTCAGGGACCTTGAGTGAC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCAAGTGGGTCGCTCACTaGGAGACGGCCCAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSKWVAH*ETAQFV
Trigger: GACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMRLCWP*MSISPL
Trigger: CAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNRLLGS*RDEPGR
Trigger: GCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTRLLGS*RDEPGR
Trigger: GCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCT...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCTGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWACPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTCAGGGACCCAGACTaGAATGGTGCCTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEFRDPD*NGASLS
Trigger: TGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCTCAGTGCACAGGGTATaGCTCCAAGTGGTATGCAAT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWASVHRV*LQVVCN
Trigger: ATTGCATACCACTTGGAGCCATACCCTGTGCACTGA...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAGTCACTCAAGGTCCCTaGGAGTGGTCATCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTVTQGP*EWSSGC
Trigger: ACACCCTGATGACCACTCTCAGGGACCTTGAGTGAC...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTCGAGCCACACTGTCTaGAGTGGGTCGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSSHTV*SGSLTE
Trigger: CTCAGTGAGCGACCCACTTCAGACAGTGTGGCTCGA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCATTGATTTGTCAATCTaGGGCCTCAGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTIDLSI*GLSLAK
Trigger: CTTAGCTAAACTGAGGCCTCAGATTGACAAATCAAT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTTGACCTGTGCCTCTTaGACTTCCCGTTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFLTCAS*TSRCNF
Trigger: AAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWACQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGERLCWP*MSISPL
Trigger: CAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTTTGCTTTTCTTGCCTaGGCTTTTGGTGTGATATCT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTFAFLA*AFGVIS
Trigger: AGATATCACACCAAAAGCTCAGGCAAGAAAAGCAAA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNGHVSS*RNTEWR
Trigger: TCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282884.13
ENST00000405154.6
CDS-3UTR GCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTTCCTCATTGACCTGTaGCTCTTGAACTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMFLIDL*LLNFPL
Trigger: CAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTCCTCATTGACCTGTaGCTCTTGAACTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVFLIDL*LLNFPL
Trigger: CAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTGGGAACTGTCCATCTaGCCAAGCACTTTGCATGCC +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQWELSI*PSTLHA
Trigger: GGCATGCAAAGTGCTTGGGCAGATGGACAGTTCCCA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTGGGAACTGTCCATCTaGCCAAGCACTTTGCATGCC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNWELSI*PSTLHA
Trigger: GGCATGCAAAGTGCTTGGGCAGATGGACAGTTCCCA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTGTAGGTGCGTGTGGTaGATTGGTCATCGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGECRCVW*IGHRSD
Trigger: GTCTGAACGATGACCAATCCACCACACGCACCTACA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282884.13
CDS-3UTR CCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVCPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTGCTGGATGAACTGCTaGAGATTGACTTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGECWMNC*RLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGAGGCCTCTATTTCAATaGGCTCCGCTGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQRPLFQ*APLAKR
Trigger: CCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCT...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGGACCCAGACTGGAATaGTGCCTCCCTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNGPRLE*CLPFNV
Trigger: GACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGGGACCCAGACTGGAATaGTGCCTCCCTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQGPRLE*CLPFNV
Trigger: GACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCC...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGAATGCGGAGATTACTaGGGAGCTGCCGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNECGDY*GAAEMN
Trigger: GTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTGAATGCGGAGATTACTaGGGAGCTGCCGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTECGDY*GAAEMN
Trigger: GTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTC...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTCAGTGCACAGGGTATaGCTCCAAGTGGTATGCAAT +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMSVHRV*LQVVCN
Trigger: ATTGCATACCACTTGGAGCCATACCCTGTGCACTGA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATGCATGGATGGAGTCTaGCAACATGCACACGGTCAT +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQCMDGV*QHAHGH
Trigger: ATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGAAGTGGGTCGCTCACTaGGAGACGGCCCAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMKWVAH*ETAQFV
Trigger: GACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVCQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNRLCWP*MSISPL
Trigger: CAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCACGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHARRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGCGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGERRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCCATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTCCTCATTGACCTGTaGCTCTTGAACTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEFLIDL*LLNFPL
Trigger: CAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGETFVPV*WMNCWR
Trigger: TCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQRLLGS*RDEPGR
Trigger: GCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTGGTCCGCCACTTAGCTaGACTAGAAAAGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTGPPLS*TRKGNS
Trigger: AGAGTTGCCTTTTCTAGTGCAGCTAAGTGGCGGACC...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCGTGTTTTTCGTGGTATaGCAAGGCATCTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAVFFVV*QGISET
Trigger: AGTTTCAGAGATGCCTTGGCATACCACGAAAAACAC...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHACPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTGCTGGATGAACTGCTaGAGATTGACTTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQCWMNC*RLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTCAATGGGCTCCGCTaGCAAAACGGTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVFNGLR*QNGNFC
Trigger: ACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTTCAGGGACCCAGACTaGAATGGTGCCTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFFRDPD*NGASLS
Trigger: TGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAGAATGCGGAGATTACTaGGGAGCTGCCGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTECGDY*GAAEMN
Trigger: GTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTC...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTCAGTGCACAGGGTATaGCTCCAAGTGGTATGCAAT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGESVHRV*LQVVCN
Trigger: ATTGCATACCACTTGGAGCCATACCCTGTGCACTGA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATCAGCAATGCATGGATaGAGTCTGGCAACATGCACA +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHASAMHG*SLATCT
Trigger: TGTGCATGTTGCCAGACTCCATCCATGCATTGCTGA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAAAAGGCAATGCACAATaGGAACTGTCCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAKGNAQ*ELSICP
Trigger: TGGGCAGATGGACAGTTCCCATTGTGCATTGCCTTT...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGCACAGTTCTGGAGACTaGGAAGTTCATGATTATGGC +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMHSSGD*EVHDYG
Trigger: GCCATAATCATGAACTTCCCAGTCTCCAGAACTGTG...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTCGAGCCACACTGTCTaGAGTGGGTCGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMSSHTV*SGSLTE
Trigger: CTCAGTGAGCGACCCACTTCAGACAGTGTGGCTCGA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACTCGAGCCACACTGTCTaGAGTGGGTCGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYSSHTV*SGSLTE
Trigger: CTCAGTGAGCGACCCACTTCAGACAGTGTGGCTCGA...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCGAGCCACACTGTCTaGAGTGGGTCGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: SSISTSFLLIFCSRRTISSSHTV*SGSLTE
Trigger: CTCAGTGAGCGACCCACTTCAGACAGTGTGGCTCGA...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCATTGATTTGTCAATCTaGGGCCTCAGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAIDLSI*GLSLAK
Trigger: CTTAGCTAAACTGAGGCCTCAGATTGACAAATCAAT...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTGACCTGTGCCTCTTaGACTTCCCGTTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGELTCAS*TSRCNF
Trigger: AAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFRLCWP*MSISPL
Trigger: CAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCTGGCTAAGTGGTGTCTaGCTGAATCTGTCTAAATAT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAWLSGV*LNLSKY
Trigger: ATATTTAGACAGATTCAGTCAGACACCACTTAGCCA...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTACTCATATCTTCAGTTaGGGTCCGCCACTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFTHIFS*GPPLSC
Trigger: GCAGCTAAGTGGCGGACCTCAACTGAAGATATGAGT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAGGTAGGAGAGGGATGTaGACACAGCATCGTTATATA +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQGRRGM*TQHRYI
Trigger: TATATAACGATGCTGTGTTCACATCCCTCTCCTACC...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNRRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGCGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQRRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTCCTCATTGACCTGTaGCTCTTGAACTTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNFLIDL*LLNFPL
Trigger: CAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNTFVPV*WMNCWR
Trigger: TCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQTFVPV*WMNCWR
Trigger: TCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGT...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCGTTTCACAAAACAAATaGAAGTGGCTTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVVSQNK*KWLPVE
Trigger: CTCCACAGGAAGCCACTTGCATTTGTTTTGTGAAAC...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCATTTTTGTATACCATTaGCCACTACCCCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAIFVYH*PLPLRN
Trigger: ATTTCGGAGGGGTAGTGGGCAATGGTATACAAAAAT...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCACTGTAGGTGCGTGTaGTGGATTGGTCATCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFHCRCV*WIGHRS
Trigger: TGAACGATGACCAATCCACCACACGCACCTACAGTG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282884.13
CDS-3UTR CCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNCPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTCAATGGGCTCCGCTaGCAAAACGGTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEFNGLR*QNGNFC
Trigger: ACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAGGCCTCTATTTCAATaGGCTCCGCTGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQRPLFQ*APLAKR
Trigger: CCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGGACCCAGACTGGAATaGTGCCTCCCTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQGPRLE*CLPFNV
Trigger: GACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTCAGGGACCCAGACTaGAATGGTGCCTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQFRDPD*NGASLS
Trigger: TGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACACCTTGGTACCTCTGTTaGGTCTCCTCCCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTPWYLC*VSSLKT
Trigger: TGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGG...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTGCATGGATGGAGTCTaGCAACATGCACACGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFCMDGV*QHAHGH
Trigger: ATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTTCCATCTAAGTGACTaGAAGAAACCACAATGGTCC +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMFHLSD*KKPQWS
Trigger: GGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGTCACTCAAGGTCCCTaGGAGTGGTCATCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMVTQGP*EWSSGC
Trigger: ACACCCTGATGACCACTCTCAGGGACCTTGAGTGAC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNCQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNCQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCAACAGTCTGTTTCTCTaGAGACCATTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWANSLFL*RPFCSY
Trigger: ATAAGAGCAAAATGGTCTTCAGAGAAACAGACTGTT...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGC +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQVCWMN*WRLTCR
Trigger: GCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGAC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFTFVPV*WMNCWR
Trigger: TCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTCAAACAATCCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSFKQSF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGGATTGTTTGAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCGAAAAATATCTGTTATaGTCTGTGGCCACACGTATA +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAEKYLL*SVATRI
Trigger: TATACGTGTGGCCACAGAGCATAACAGATATTTTTC...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAGGACAAGAAAGGGACTATGGACACTATGTCCACAGGCAACACACTATGGGCCTACAAGTTGCTAGGATaGTGCTTGTCCTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: KDKKGTMDTMSTGNTLWAYKLLG*CLSLLK
Trigger: TTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTA...GGCCCATAGTGTGTTGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTGCAGGAACACGGAGTaGAGAAGACTAAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFCRNTE*RRLSLC
Trigger: ACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282884.13
ENST00000405154.6
CDS-3UTR CCA 90 bp GTTTCTCAATGGATTGAAGCTTCTCTGTCTGCAGACGGATTAGCTTCTTCAACTGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VSQWIEASLSADGLASSTAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...AGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFCPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATGCTGGATGAACTGCTaGAGATTGACTTGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQCWMNC*RLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTTCAATGGGCTCCGCTaGCAAAACGGTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNFNGLR*QNGNFC
Trigger: ACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAGGCCTCTATTTCAATaGGCTCCGCTGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQRPLFQ*APLAKR
Trigger: CCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTCAGGGACCCAGACTaGAATGGTGCCTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQFRDPD*NGASLS
Trigger: TGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGAATGCGGAGATTACTaGGGAGCTGCCGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQECGDY*GAAEMN
Trigger: GTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAACCTTGGTACCTCTGTTaGGTCTCCTCCCTAAAGACA +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQPWYLC*VSSLKT
Trigger: TGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGG...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTCAGTGCACAGGGTATaGCTCCAAGTGGTATGCAAT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSVHRV*LQVVCN
Trigger: ATTGCATACCACTTGGAGCCATACCCTGTGCACTGA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCTCTGTTACCCAGGCTaGAGTGCAGTAATGCGATCT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSLCYPG*SAVMRS
Trigger: AGATCGCATTACTGCACTCCAGCCTGGGTAACAGAG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTCAGCAATGCATGGATaGAGTCTGGCAACATGCACA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSAMHG*SLATCT
Trigger: TGTGCATGTTGCCAGACTCCATCCATGCATTGCTGA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGCAATACCTTACCCATaGTGTGTACACCAACAGATC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNAIPYP*CVHQQI
Trigger: GATCTGTTGGTGTACACACCATGGGTAAGGTATTGC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTGGAAGAAACCACAATaGTCCATAATATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMWKKPQ*SIICRA
Trigger: TGCTCTGCATATTATGGACCATTGTGGTTTCTTCCA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATTCCATCTAAGTGACTaGAAGAAACCACAATGGTCC +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAFHLSD*KKPQWS
Trigger: GGACCATTGTGGTTTCTTCCAGTCACTTAGATGGAA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACACAAGAAAGGGACTATaGACACTATGTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNTRKGL*TLCPQA
Trigger: TGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGT...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTGTCAATCTCCCCTTTaGCCTTACCGATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFCQSPL*PYRSFL
Trigger: AAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGAGGATTAAAACCAGATaGGATAGGATTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMRIKTR*DRILQN
Trigger: ATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTTAAAGCAATGTTCCTaGAGTAGACCAACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNLKQCS*SRPTQL
Trigger: AAGCTGGGTTGGTCTACTTCAGGAACATTGCTTTAA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTCCTTTCCATCTAAGTaGCTGGAAGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQSFPSK*LEETTM
Trigger: CATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATGGCTAAGTGGTGTCTaGCTGAATCTGTCTAAATAT +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQWLSGV*LNLSKY
Trigger: ATATTTAGACAGATTCAGTCAGACACCACTTAGCCA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGACCTACACTGTAGGTaGGTGTGGTGGATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQDLHCR*VWWIGH
Trigger: ATGACCAATCCACCACACGCACCTACAGTGTAGGTC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282884.13
CDS-3UTR GCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMGHVSS*RNTEWR
Trigger: TCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405154.6
CDS-3UTR GCA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSISTSFLLIFCSRRTISGHVSS*RNTEWR
Trigger: TCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACC...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSRRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCACGTCGTAGAATGAGCTaGACATCACTAGCATACTGC +
Preference number: 4 (lower is better)
Translates to: SADGLASSTHLLLFCSYSRRRMS*TSLAYC
Trigger: GCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTGCTGGAGATTGACTTaGCGCAACTCCTTAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSCWRLT*RNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSTFVPV*WMNCWR
Trigger: TCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTAGTGTAAATCAGCAATaGATGGATGGAGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTSVNQQ*MDGVWQ
Trigger: TTGCCAGACTCCATCCATGCATTGCTGATTTACACT...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACAGTGTAAATCAGCAATaGATGGATGGAGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNSVNQQ*MDGVWQ
Trigger: TTGCCAGACTCCATCCATGCATTGCTGATTTACACT...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTGTTTCACAAAACAAATaGAAGTGGCTTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTVSQNK*KWLPVE
Trigger: CTCCACAGGAAGCCACTTGCATTTGTTTTGTGAAAC...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTTTCACAAAACAAATaGAAGTGGCTTCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNVSQNK*KWLPVE
Trigger: CTCCACAGGAAGCCACTTGCATTTGTTTTGTGAAAC...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGAAAAATATCTGTTATaGTCTGTGGCCACACGTATA +
Preference number: 4 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMEKYLL*SVATRI
Trigger: TATACGTGTGGCCACAGAGCATAACAGATATTTTTC...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTATCAGGAAACCCCATaGCTGTTTGGATACATACTT +
Preference number: 4 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDYQETP*LFGYIL
Trigger: AAGTATGTATCCAAACAGGCATGGGGTTTCCTGATA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTTTAACTGTGATACTCTaGTGGGAACCCAAGACTACT +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTLTVIL*WEPKTT
Trigger: AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAA...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTGCAGGAACACGGAGTaGAGAAGACTAAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSCRNTE*RRLSLC
Trigger: ACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTGTCCTGTAAGCGTTTaGTGGCTTGTCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSCPVSV*WLVQEI
Trigger: GATCTCTTGGACAAGCCACCAAACGCTTACAGGACA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGAGGCCTCTATTTCAATaGGCTCCGCTGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMRPLFQ*APLAKR
Trigger: CCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACGTAAAAATGGCTAAGTaGTGTCTGACTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDVKMAK*CLTESV
Trigger: GACAGATTCAGTCAGACACCACTTAGCCATTTTTAC...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCATTACATTTATGCTGTaGAAGCAAGTGCTTACATGT +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFITFML*KQVLTC
Trigger: ACATGTAAGCACTTGCTTCCACAGCATAAATGTAAT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCATCGAAAGCTTATTCTaGAGATGTAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: KELLQLSGSHCPGIESLFIESLF*RCKAAI
Trigger: TATTGCTGCTTTACATCTCCAGAATAAGCTTTCGAT...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp GTTTCTCAATGGATTGAAGCTTCTCTGTCTGCAGACGGATTAGCTTCTTCAACTTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSQWIEASLSADGLASSTFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...AGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTGACCTGTGCCTCTTaGACTTCCCGTTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQLTCAS*TSRCNF
Trigger: AAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCACAGGTATTCTAGGATaGTCTACACAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSTGILG*STQALS
Trigger: ACTGAGTGCCTGTGTAGATCATCCTAGAATACCTGT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTTGCATTTCCCTGCTaGTCAGTGATGTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSFAFPC*SVMLST
Trigger: AGTGCTCAACATCACTGATCAGCAGGGAAATGCAAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGAGAAATGGCTTCAAATaGACAGTCTGTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGERNGFK*TVCFSE
Trigger: TTCAGAGAAACAGACTGTTCATTTGAAGCCATTTCT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTACAGGTATTCTAGGATaGTCTACACAGGCACCAATA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFTGILG*STQAPI
Trigger: TATTGGTGCCTGTGTAGATCATCCTAGAATACCTGT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGCATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAACATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCGCTTTGCATTATAGCTaGTGGACAAAAATATCAACA +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVALHYS*WTKIST
Trigger: TGTTGATATTTTTGTCCAGCAGCTATAATGCAAAGC...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGTGTAAATCAGCAATaGATGGATGGAGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSVNQQ*MDGVWQ
Trigger: TTGCCAGACTCCATCCATGCATTGCTGATTTACACT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTTATCAGGAAACCCCATaGCTGTTTGGATACATACTT +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTYQETP*LFGYIL
Trigger: AAGTATGTATCCAAACAGGCATGGGGTTTCCTGATA...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATGCTGTGGAAGCAAGTaGTTACATGTTCTTGTTATA +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHACCGSK*LHVLVI
Trigger: TATAACAAGAACATGTAAGCACTTGCTTCCACAGCA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGATTTATCAAAGGCAATaGACAATGGGAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEIYQRQ*TMGTVH
Trigger: ATGGACAGTTCCCATTGTGCATTGCCTTTGATAAAT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTCAATGGGCTCCGCTaGCAAAACGGTAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQFNGLR*QNGNFC
Trigger: ACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTGGACCCAGACTGGAATaGTGCCTCCCTTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSGPRLE*CLPFNV
Trigger: GACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCC...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTGCATGGATGGAGTCTaGCAACATGCACACGGTCAT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMCMDGV*QHAHGH
Trigger: ATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACCACCTAATTAAGCAATaGCTAGGACAGTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDHLIKQ*LGQFHK
Trigger: TTTGTGAAACTGTCCTAGCCATTGCTTAATTAGGTG...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAACACCTAATTAAGCAATaGCTAGGACAGTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQHLIKQ*LGQFHK
Trigger: TTTGTGAAACTGTCCTAGCCATTGCTTAATTAGGTG...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAGGCCACACGTATATTTaGAAATATTGTAAAGGAACG +
Preference number: 4 (lower is better)
Translates to: ISNAWMESGNMHTVIITQGHTYI*KYCKGT
Trigger: CGTTCCTTTACAATATTTCCAAATATACGTGTGGCC...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAGGCCACACGTATATTTaGAAATATTGTAAAGGAACG +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAGHTYI*KYCKGT
Trigger: CGTTCCTTTACAATATTTCCAAATATACGTGTGGCC...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATATCTGTTATGCTCTGTaGCCACACGTATATTTGGAA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNICYAL*PHVYLE
Trigger: TTCCAAATATACGTGTGGCCACAGAGCATAACAGAT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAAACCCCATGCCTGTTTaGATACATACTTACCAATTA +
Preference number: 4 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHANPMPV*IHTYQL
Trigger: TAATTGGTAAGTATGTATCCAAACAGGCATGGGGTT...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTGGAAGAAACCACAATaGTCCATAATATGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNWKKPQ*SIICRA
Trigger: TGCTCTGCATATTATGGACCATTGTGGTTTCTTCCA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCATTACATTTATGCTGTaGAAGCAAGTGCTTACATGT +
Preference number: 4 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVITFML*KQVLTC
Trigger: ACATGTAAGCACTTGCTTCCACAGCATAAATGTAAT...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 72 bp TGTGATACTCTGCTGGGAACCCAAGACTACTACAAGTaGCTAGGATGCTGCTTGTCCTTACTTAAAGTTATT +
Preference number: 4 (lower is better)
Translates to: CDTLLGTQDYYK*LGCCLSLLKVI
Trigger: AATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTGGGTTCCCAGCAGAGTATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCCCACAAACAATCCTCTaGACTCCATCCACCCATACT +
Preference number: 4 (lower is better)
Translates to: SSISTSFLLIFCSRRTISPQTIL*TPSTHT
Trigger: AGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGG...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCGTTCGACCTATTGCTTaGGCTAAGGCTATGACAACC +
Preference number: 4 (lower is better)
Translates to: SSISTSFLLIFCSRRTISVRPIA*AKAMTT
Trigger: GGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAAC...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp ATTGAAGCTTCTCTGTCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IEASLSADGLASSTHLLLMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...CAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTATTGATTTGTCAATCTaGGGCCTCAGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFIDLSI*GLSLAK
Trigger: CTTAGCTAAACTGAGGCCTCAGATTGACAAATCAAT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTGACCTGTGCCTCTTaGACTTCCCGTTGCAATTTT +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQLTCAS*TSRCNF
Trigger: AAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR TCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATAGGATTAAAACCAGATaGGATAGGATTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNRIKTR*DRILQN
Trigger: ATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCATGCCCAGCCCCTTTaGCCATTTTTAATTGGATTA +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSHAQPL*PFLIGL
Trigger: TAATCCAATTAAAAATGGTCAAAGGGGCTGGGCATG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTTTAGTATTTAGAACCTaGACATTCCCCCAGATGAAA +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTLVFRT*TFPQMK
Trigger: TTTCATCTGGGGGAATGTTCAGGTTCTAAATACTAA...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACAGAAATGGCTTCAAATaGACAGTCTGTTTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNRNGFK*TVCFSE
Trigger: TTCAGAGAAACAGACTGTTCATTTGAAGCCATTTCT...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGGTAGGAGAGGGATGTaGACACAGCATCGTTATATA +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQGRRGM*TQHRYI
Trigger: TATATAACGATGCTGTGTTCACATCCCTCTCCTACC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGACAGGTATTCTAGGATaGTCTACACAGGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMTGILG*STQAPA
Trigger: TGCAGGTGCCTGTGTAGATCATCCTAGAATACCTGT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: SLASVHRVWLQVVCNLGELLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACGCTTTGCATTATAGCTaGTGGACAAAAATATCAACA +
Preference number: 4 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDALHYS*WTKIST
Trigger: TGTTGATATTTTTGTCCAGCAGCTATAATGCAAAGC...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTCCAAAGTTGCCTTCATaGATAAGACATAGCTCTATT +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTPKLPS*IRHSSI
Trigger: AATAGAGCTATGTCTTATGCATGAAGGCAACTTTGG...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTAAGTTGCTAGGATGCTaGTTGTCCTTACTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: MKLSERLTVILCWEPKTTKLLGC*LSLLKV
Trigger: AACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTT...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTACAAGTTGCTAGGATaGTGCTTGTCCTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNYKLLG*CLSLLK
Trigger: TTTAAGTAAGGACAAGCAGCATCCTAGCAACTTGTA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCACTAAGGGGCAGACTCTaGCTGTATAAAGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SADGLASSTHLLLFCSYSLRGRL*LYKVLS
Trigger: TGAAAGAACTTTATACAGGCAGAGTCTGCCCCTTAG...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTGCAGGAACACGGAGTaGAGAAGACTAAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMCRNTE*RRLSLC
Trigger: ACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405154.6
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGCTATGACAACCTCCTaGCAAGTTGTGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMAMTTS*QVVTSV
Trigger: CACTGAAGTCACAACTTGCCAGGAGGTTGTCATAGC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTATCTGTTATGCTCTGTaGCCACACGTATATTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFICYAL*PHVYLE
Trigger: TTCCAAATATACGTGTGGCCACAGAGCATAACAGAT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGCAATACCTTACCCATaGTGTGTACACCAACAGATC +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQAIPYP*CVHQQI
Trigger: GATCTGTTGGTGTACACACCATGGGTAAGGTATTGC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAAGTCCAGCGTCTTGTaGAATAGATCCTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQKSSVL*NRSSVH
Trigger: ATGAACAGAGGATCTATTCCACAAGACGCTGGACTT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR TCA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCAATTGATTTGTCAATCTaGGGCCTCAGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SADGLASSTHLLLFCSYSIDLSI*GLSLAK
Trigger: CTTAGCTAAACTGAGGCCTCAGATTGACAAATCAAT...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACTTCAATGTCTGCATGTaGGGCCTCTATTTCAATGGG +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYFNVCM*GLYFNG
Trigger: CCCATTGAAATAGAGGCCTCACATGCAGACATTGAA...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGATTAAAACCAGATaGGATAGGATTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFRIKTR*DRILQN
Trigger: ATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCT...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCACCTTTTCATTTTGGTaGTCGTTTCCTTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSTFSFW*SFPLLC
Trigger: GCACAACAAAGGAAACGATCACCAAAATGAAAAGGT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATTAGTATTTAGAACCTaGACATTCCCCCAGATGAAA +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTLVFRT*TFPQMK
Trigger: TTTCATCTGGGGGAATGTTCAGGTTCTAAATACTAA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAAACAGTCTGTTTCTCTaGAGACCATTTTGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTNSLFL*RPFCSY
Trigger: ATAAGAGCAAAATGGTCTTCAGAGAAACAGACTGTT...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCATTGTGGCTTTGATTTaGATTTCCCTGCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSIVALI*ISLLIS
Trigger: ACTGATCAGCAGGGAAATGCAAATCAAAGCCACAAT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCTGCCCAAGCACTTTaGATGCCTGAAATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSAQAL*MPEIKS
Trigger: ACTTTTGATTTCAGGCATGCAAAGTGCTTGGGCAGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTCAGCAATGCATGGATaGAGTCTGGCAACATGCACA +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSSAMHG*SLATCT
Trigger: TGTGCATGTTGCCAGACTCCATCCATGCATTGCTGA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCACCTAATTAAGCAATaGCTAGGACAGTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFHLIKQ*LGQFHK
Trigger: TTTGTGAAACTGTCCTAGCCATTGCTTAATTAGGTG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGACAAGAAAGGGACTATaGACACTATGTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMTRKGL*TLCPQA
Trigger: TGCCTGTGGACATAGTGTCCATAGTCCCTTTCTTGT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTAAAGGCAATGCACAATaGGAACTGTCCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSKGNAQ*ELSICP
Trigger: TGGGCAGATGGACAGTTCCCATTGTGCATTGCCTTT...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 72 bp ATATCAACACTGTTGATGTGTGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISTLLMCENTVS*FFSISAQGMAP
Trigger: TGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTCACACATCAACAGTGTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR TCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATTGATTTGTCAATCTaGGGCCTCAGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQIDLSI*GLSLAK
Trigger: CTTAGCTAAACTGAGGCCTCAGATTGACAAATCAAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTTCCCTCCTTTTGATTaGTTTGTCAATCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMFPPFD*FVNLRP
Trigger: AGGCCTCAGATTGACAAATCAATCAAAAGGAGGGAA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCGGTTCCCTCCTTTTaGTTGATTTGTCAATCTGAG +
Preference number: 4 (lower is better)
Translates to: SSISTSFLLIFCSRRTISSVPSF*LICQSE
Trigger: CTCAGATTGACAAATCAATCAAAAGGAGGGAACCGA...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMIFPQL*CHFPTS
Trigger: TGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGAT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTCCTTTCCATCTAAGTaGCTGGAAGAAACCACAATG +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMSFPSK*LEETTM
Trigger: CATTGTGGTTTCTTCCAGTCACTTAGATGGAAAGGA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGTGTTTTTCGTGGTATaGCAAGGCATCTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMVFFVV*QGISET
Trigger: AGTTTCAGAGATGCCTTGGCATACCACGAAAAACAC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTCTGCCCAAGCACTTTaGATGCCTGAAATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMSAQAL*MPEIKS
Trigger: ACTTTTGATTTCAGGCATGCAAAGTGCTTGGGCAGA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CCA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539545.1
3UTR CAA 72 bp AGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTTTGCTTAAACTCAGTT +
Preference number: 4 (lower is better)
Translates to: RRISFFNSSAVV*QLFSTFCLNSV
Trigger: AACTGAGTTTAAGCAAAAGGTGCTGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR TCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTTAAAGCAATGTTCCTaGAGTAGACCAACCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSLKQCS*SRPTQL
Trigger: AAGCTGGGTTGGTCTACTTCAGGAACATTGCTTTAA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCACTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: SADGLASSTHLLLFCSYSLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCATTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: SADGLASSTHLLLFCSYSFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR GCA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTACCAGATAACGGTTTaGAAATATTTTCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSYQITV*KYFLPI
Trigger: GATTGGGAGAAAATATTTGCAAACCGTTATCTGGTA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR GCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTTTAACTGTGATACTCTaGTGGGAACCCAAGACTACT +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSLTVIL*WEPKTT
Trigger: AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAA...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGATTTTTGTATACCATTaGCCACTACCCCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMIFVYH*PLPLRN
Trigger: ATTTCGGAGGGGTAGTGGGCAATGGTATACAAAAAT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATGCTGTGGAAGCAAGTaGTTACATGTTCTTGTTATA +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQCCGSK*LHVLVI
Trigger: TATAACAAGAACATGTAAGCACTTGCTTCCACAGCA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTCCAGCTGTTTCTCAATaGATTGAAGCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SISTSFLLIFCSRRTISSPAVSQ*IEASLS
Trigger: AGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGG...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR TCA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGATGATAGGATTTTCATaGGGTGCTAAGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMMIGFS*GAKCLS
Trigger: TGAAAGACACTTAGCACCTCATGAAAATCCTATCAT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACCATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTTCTTTTGATCTTTTaGTCTAGACGGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQFLLIF*SRRTIS
Trigger: GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR GCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCAAAGTTGCCTTCATaGATAAGACATAGCTCTATT +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYPKLPS*IRHSSI
Trigger: AATAGAGCTATGTCTTATGCATGAAGGCAACTTTGG...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACATTTATCAAAGGCAATaGACAATGGGAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYIYQRQ*TMGTVH
Trigger: ATGGACAGTTCCCATTGTGCATTGCCTTTGATAAAT...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACTCCTCTGTTCATCATTaGCACAAATCAAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYSSVHH*HKSKRK
Trigger: CTTCCTTTTTGATTTGTGCCAATGATGAACAGAGGA...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTGTAAAAATGGCTAAGTaGTGTCTGACTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSVKMAK*CLTESV
Trigger: GACAGATTCAGTCAGACACCACTTAGCCATTTTTAC...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR TCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTAGGATTAAAACCAGATaGGATAGGATTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSRIKTR*DRILQN
Trigger: ATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCT...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTCATCTGCTGTTGTTTTaGAGTTATTCAGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SISTSFLLIFCSRRTISSHLLLF*SYSAPF
Trigger: AAAAGGTGCTGAATAACTGCAAAACAACAGCAGATG...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR GCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTAAGTTGCTAGGATGCTaGTTGTCCTTACTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSKLLGC*LSLLKV
Trigger: AACTTTAAGTAAGGACAAGCAGCATCCTAGCAACTT...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTAACCCCATGCCTGTTTaGATACATACTTACCAATTA +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSNPMPV*IHTYQL
Trigger: TAATTGGTAAGTATGTATCCAAACAGGCATGGGGTT...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CCA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACATCGAAAGCTTATTCTaGAGATGTAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: KPQWSIICRANYVQAIPYIESLF*RCKAAI
Trigger: TATTGCTGCTTTACATCTCCAGAATAAGCTTTCGAT...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
3UTR CAA 72 bp AACCAAAGTCAGTCAAATGTGTTAAAACATCCAAAGTaGCCTTCATGCATAAGACATAGCTCTATTGTTACC +
Preference number: 4 (lower is better)
Translates to: NQSQSNVLKHPK*PSCIRHSSIVT
Trigger: GGTAACAATAGAGCTATGTCTTATGCATGAAGGCAACTTTGGATGTTTTAACACATTTGACTGACTTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR GCA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTCTTCTTCAACTCATCTaGTGTTGTTTTGCAGTTATT +
Preference number: 4 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSLLQLI*CCFAVI
Trigger: AATAACTGCAAAACAACAGCAGATGAGTTGAAGAAG...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS TCA 90 bp GATAGGATTCTGCAGAATGCGGAGATTACTGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGACCCAGACTGGAATGGTGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: DRILQNAEITGELPR*TRSLQGPRLEWCLP
Trigger: AGGGAGGCACCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS GCA 90 bp CCAGATGAGATAGGATTCTGCAGAATGCGGAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGCTTCAGGGACCCAGACTGGAATGGT +
Preference number: 5 (lower is better)
Translates to: PDEIGFCRMRRLLGS*RDEPGRFRDPDWNG
Trigger: ACCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS GCA 90 bp ACTCTAATCTATGCCTCCACAGTTCAACAGCCTCATCATCTTCTGTaGCTCTACCACTCTCCTCAGCAGGCAGGAGTCTCCGAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TLIYASTVQQPHHLL*LYHSPQQAGVSEPV
Trigger: CACTGGCTCGGAGACTCCTGCCTGCTGAGGAGAGTGGTAGAGGCACAGAAGATGATGAGGCTGTTGAACTGTGGAGGCATAGATTAGAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538081.5
CDS TCA 90 bp CTCATAGTTCTGGGGGTCAGAAGCTCAAAATCACTTTCACTGGGCTaGAATCAAAGTGCCAGCTGGGCCAGGGTCCCTCCAATGGTTGCA +
Preference number: 5 (lower is better)
Translates to: LIVLGVRSSKSLSLG*NQSASWARVPPMVA
Trigger: TGCAACCATTGGAGGGACCCTGGCCCAGCTGGCACTTTGATTTCAGCCCAGTGAAAGTGATTTTGAGCTTCTGACCCCCAGAACTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQL
Trigger: GAGCTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQQ
Trigger: CTGCTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542315.5
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGAGAATGAGGTAGTCTaGAGGAAGGACAGCACCACA +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTENEVV*RKDSTT
Trigger: TGTGGTGCTGTCCTTCCTCAAGACTACCTCATTCTC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS GCA 90 bp TCCGCTGGCAAAACGGTAACTTTTGTCCCTGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGCAACTCCTTAGTCAACTGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SAGKTVTFVPVCWMN*WRLTCRNSLVNCSS
Trigger: ACTGGAGCAGTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTTGCCAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQS
Trigger: TGACTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405154.6
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGACT +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQT
Trigger: AGTCTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541218.5
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGATT +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQI
Trigger: AATCTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282884.13
CDS GCA 90 bp GTGGGTCGCTCACTGAGAGACGGCCCAGTTCGTCGTAGAATGAGCTaGACATCACTAGCATACTGCCCCCATTTGTTTAAGGATATGATA +
Preference number: 5 (lower is better)
Translates to: VGRSLRDGPVRRRMS*TSLAYCPHLFKDMI
Trigger: TATCATATCCTTAAACAAATGGGGGCAGTATGCTAGTGATGTGCAGCTCATTCTACGACGAACTGGGCCGTCTCTCAGTGAGCGACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000535907.5
ENST00000541218.5
ENST00000541490.5
ENST00000542004.5
ENST00000542315.5
ENST00000542865.5
ENST00000545413.1
ENST00000611440.1
ENST00000615708.4
CDS GCA 90 bp ATTTCAATGGGCTCCGCTGGCAAAACGGTAACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGATTGACTTGCCGCAACTCCTTAGTC +
Preference number: 5 (lower is better)
Translates to: ISMGSAGKTVTFVPV*WMNCWRLTCRNSLV
Trigger: GACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 90 bp AGGTCCCTGAGAGTGGTCATCAGGGTGTTAGGTCATGTCTCTAGCTaGAGGAACACGGAGTGGAGAAGACTAAGTCTGTGTAGTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RSLRVVIRVLGHVSS*RNTEWRRLSLCSQF
Trigger: AAACTGACTACACAGACTTAGTCTTCTCCACTCCGTGTTCCTGCAGCTAGAGACATGACCTAACACCCTGATGACCACTCTCAGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542004.5
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCATGTCAATCTCCCCTTaGACCTTACCGATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTMSISP*TLPIFP
Trigger: AGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACAT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCGCATACTGCCCCCATTaGTTTAAGGATATGATAGGA +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTAYCPH*FKDMIG
Trigger: TCCTATCATATCCTTAAACAAATGGGGGCAGTATGC...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: KELLQLSGSHCPGIESLFSSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AGATGGGTGTTAGCCCATCATGGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: RWVLAHHGVSQDGLSLLTSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...GGTCAGGAGACTGAGACCATCCTGGCTAACACCATGATGGGCTAACACCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTTGTCCTGTAAGCGTTaGGTGGCTTGTCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVLSCKR*VACPRD
Trigger: ATCTCTTGGACAAGCCACCAAACGCTTACAGGACAA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCACTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHALLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAGGAAGTTTACTGTCCTaGGTACCTCTGTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAGSLLS*VPLLGL
Trigger: GAGACCCAACAGAGGTACCAAGGACAGTAAACTTCC...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACGAGAATGAGGTAGTCTaGAGGAAGGACAGCACCACA +
Preference number: 5 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDENEVV*RKDSTT
Trigger: TGTGGTGCTGTCCTTCCTCAAGACTACCTCATTCTC...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541490.5
CDS TCA 90 bp TCCACAGCTTTGATGCCATTTTCCAACCTCAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTGACCTTACCGATCTTTCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: STALMPFSNLRLCWP*MSISPLTLPIFPLT
Trigger: GGTTAAAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 90 bp ACTCTAATCTATGCCTCCACAGTTCAACAGCCTCATCATCTTCTGTaGCTCTACCACTCTCTTTTCTGGAAGCTGGAAAGTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: TLIYASTVQQPHHLL*LYHSLFWKLESPRS
Trigger: TGACCTTGGACTTTCCAGCTTCCAGAAAAGAGAGTGGTAGAGGCACAGAAGATGATGAGGCTGTTGAACTGTGGAGGCATAGATTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538365.2
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGCTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTGTCCTGTAAGCGTTaGGTGGCTTGTCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGELSCKR*VACPRD
Trigger: ATCTCTTGGACAAGCCACCAAACGCTTACAGGACAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGESSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDSSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ISNAWMESGNMHTVIITQSSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNLLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACCTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNLLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGCTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQLLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGGAAGTTTACTGTCCTaGGTACCTCTGTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNGSLLS*VPLLGL
Trigger: GAGACCCAACAGAGGTACCAAGGACAGTAAACTTCC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGGAGAATGAGGTAGTCTaGAGGAAGGACAGCACCACA +
Preference number: 5 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQENEVV*RKDSTT
Trigger: TGTGGTGCTGTCCTTCCTCAAGACTACCTCATTCTC...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCAGCACCCTAGGACACTaGTGTAGTGTAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVSTLGH*CSVNQQ
Trigger: TTGCTGATTTACACTACACAAGTGTCCTAGGGTGCT...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS GCA 90 bp TTCCTCATTGACCTGTGCCTCTTGAACTTCCCGTTGCAATTTTTCTaGTTCAAGACCACTTTCCATAGTCCGGATCTGTGCCAAATAGTC +
Preference number: 5 (lower is better)
Translates to: FLIDLCLLNFPLQFF*FKTTFHSPDLCQIV
Trigger: GACTATTTGGCACAGATCCGGACTATGGAAAGTGGTCTTGAAGCAGAAAAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAATGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 90 bp CATACATATATGCCTTCAGGATTAAAACCAGATGAGATAGGATTCTaGAGAATGCGGAGATTACTGGGGAGCTGCCGAGATGAACCAGGT +
Preference number: 5 (lower is better)
Translates to: HTYMPSGLKPDEIGF*RMRRLLGSCRDEPG
Trigger: ACCTGGTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCATATATGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGGGAGAGGAAGTCAAGTaGTCTTTCTTTGCAGATGAC +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEGEEVK*SFFADD
Trigger: GTCATCTGCAAAGAAAGACAACTTGACTTCCTCTCC...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282884.13
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGCATACTGCCCCCATTaGTTTAAGGATATGATAGGA +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMAYCPH*FKDMIG
Trigger: TCCTATCATATCCTTAAACAAATGGGGGCAGTATGC...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAACTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: ISNAWMESGNMHTVIITQLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGATGTCAATCTCCCCTTaGACCTTACCGATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEMSISP*TLPIFP
Trigger: AGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACAT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTGTCCTGTAAGCGTTaGGTGGCTTGTCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNLSCKR*VACPRD
Trigger: ATCTCTTGGACAAGCCACCAAACGCTTACAGGACAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNSSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTCTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFLLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQSLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAAGCACCCTAGGACACTaGTGTAGTGTAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: ISNAWMESGNMHTVIITQSTLGH*CSVNQQ
Trigger: TTGCTGATTTACACTACACAAGTGTCCTAGGGTGCT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTCAAGACTACTACAAGTaGCTAGGATGCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: MKLSERLTVILCWEPKTTQDYYK*LGCCLS
Trigger: GGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTG...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTATTTTTGTATACCATaGCCCACTACCCCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMYFCIP*PTTPPK
Trigger: TTTCGGAGGGGTAGTGGGCAATGGTATACAAAAATA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAAATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 5 (lower is better)
Translates to: ISNAWMESGNMHTVIITQMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVSTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATCTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAAGAGCTCCTGCAGCTTTCAGGCAGTCACTGTCCTGGCATCGAAAGCTTATTCTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KELLQLSGSHCPGIESLFFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...GAATAAGCTTTCGATGCCAGGACAGTGACTGCCTGAAAGCTGCAGGAGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATATGTCAATCTCCCCTTaGACCTTACCGATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNMSISP*TLPIFP
Trigger: AGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACAT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAACAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQQTLLA*NVNLPF
Trigger: AAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTG...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATTGTCCTGTAAGCGTTaGGTGGCTTGTCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTLSCKR*VACPRD
Trigger: ATCTCTTGGACAAGCCACCAAACGCTTACAGGACAA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCTGCTGGAGATTGACTaGCCGCAACTCCTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSLLEID*PQLLSQ
Trigger: TTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGATAAAAACGAAGGCTTaGCATTATAGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMIKTKA*HYSCWT
Trigger: TGTCCAGCAGCTATAATGCAAAGCCTTCGTTTTTAT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCATAAAAACGAAGGCTTaGCATTATAGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVIKTKA*HYSCWT
Trigger: TGTCCAGCAGCTATAATGCAAAGCCTTCGTTTTTAT...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATATTTTTGTATACCATaGCCCACTACCCCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAYFCIP*PTTPPK
Trigger: TTTCGGAGGGGTAGTGGGCAATGGTATACAAAAATA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS TCA 90 bp AGACAGATAATGTCATACATATATGCCTTCAGGATTAAAACCAGATaGGATAGGATTCTGCAGAATGCGGAGATTACTGGGGAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: RQIMSYIYAFRIKTR*DRILQNAEITGELP
Trigger: CGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCATATATGTATGACATTATCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATGCATACTGCCCCCATTaGTTTAAGGATATGATAGGA +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNAYCPH*FKDMIG
Trigger: TCCTATCATATCCTTAAACAAATGGGGGCAGTATGC...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 5 (lower is better)
Translates to: CMDGVWQHAHGHNHTICNMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...GTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATCAGCAATGCATGGATGGAGTCTGGCAACATGCACACGGTCATAATCACACAATCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: ISNAWMESGNMHTVIITQSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...TTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCCATCCATGCATTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGESTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCATCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHASTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACACTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTGTCCTGTAAGCGTTaGGTGGCTTGTCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSLSCKR*VACPRD
Trigger: ATCTCTTGGACAAGCCACCAAACGCTTACAGGACAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTCCAGTTCCTGTTCTTaGTCCTGTAAGCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSSSCS*SCKRLV
Trigger: CACCAAACGCTTACAGGACAAAGAACAGGAACTGGA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CAA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGTCCTTGGTACCTCTGTaGGGTCTCCTCCCTAAAGAC +
Preference number: 5 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMSLVPL*GLLPKD
Trigger: GTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGA...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGAAAACATACAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEKTYSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGTATGTTTT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTGGCAACATGCAATAAAAACGAAGGCTTaGCATTATAGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: GHLCSVNQQCMDGVWQHAIKTKA*HYSCWT
Trigger: TGTCCAGCAGCTATAATGCAAAGCCTTCGTTTTTAT...TGCATGTTGCCAGACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGAAACCCCATGCCTGTTaGGATACATACTTACCAATT +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEKPHAC*DTYLPI
Trigger: AATTGGTAAGTATGTATCCAAACAGGCATGGGGTTT...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACAAACCCCATGCCTGTTaGGATACATACTTACCAATT +
Preference number: 5 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDKPHAC*DTYLPI
Trigger: AATTGGTAAGTATGTATCCAAACAGGCATGGGGTTT...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTCGATGGTGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGAATGGCAAGATCAATTaGATAACTCCAAGAACCCAA +
Preference number: 5 (lower is better)
Translates to: LRWWSTLGHLCSVNQQCMNGKIN*ITPRTQ
Trigger: TTGGGTTCTTGGAGTTATCAAATTGATCTTGCCATT...CATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCACCATCGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TGGAGCACCCTAGGACACTTGTGTAGTGTAAATCAGCAATGCATGGATGGAGTCTCTCTGAAGACCATTTaGCTCTTATTCACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: WSTLGHLCSVNQQCMDGVSLKTI*LLFTEK
Trigger: TTTCTCTGTGAATAAGAGCAAAATGGTCTTCAGAGA...GACTCCATCCATGCATTGCTGATTTACACTACACAAGTGTCCTAGGGTGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQSTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp TCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTAGGAGAGTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SLASVHRVWLQVVCNLGEFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...CTCTCCTAAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTGATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SDEVVREVNCDTLLGTQDFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...GTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATTGACCTGTGCCTCTaGAACTTCCCGTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQIDLCL*NFPLQF
Trigger: AAATTGCAACGGGAAGTTCAAGAGGCACAGGTCAAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGGGAAGTTTACTGTCCTaGGTACCTCTGTTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMGSLLS*VPLLGL
Trigger: GAGACCCAACAGAGGTACCAAGGACAGTAAACTTCC...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCATTGTGGCTTTGATTaGCATTTCCCTGCTGATCAG +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSHCGFD*HFPADQ
Trigger: CTGATCAGCAGGGAAATGCAAATCAAAGCCACAATG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACACTAAGTAGAGCAGCATaGTCAGCATTCACTAAACCA +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTLSRAA*SAFTKP
Trigger: TGGTTTAGTGAATGCTGACAATGCTGCTCTACTTAG...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAACAAGACTACTACAAGTaGCTAGGATGCTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQQDYYK*LGCCLS
Trigger: GGACAAGCAGCATCCTAGCAACTTGTAGTAGTCTTG...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp ATGAAGTTGTCAGAGAGGTTAACTGTGATACTCTGCTGGGAACCCAAGACTACTGATTGTTTTGTCTTTTaGATACAGCTGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: MKLSERLTVILCWEPKTTDCFVF*IQLMAF
Trigger: GAAGGCCATCAGCTGTATCAAAAAGACAAAACAATC...AGTAGTCTTGGGTTCCCAGCAGAGTATCACAGTTAACCTCTCTGACAACTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTTCTACATCGTTTCTTTaGATCTTTTGCTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFSTSFL*IFCSRR
Trigger: CCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGA...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATCTACATCGTTTCTTTaGATCTTTTGCTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTSTSFL*IFCSRR
Trigger: CCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp GTTTCTCAATGGATTGAAGCTTCTCTGTCTGCAGACGGATTAGCTTCTTCAACTTCTACATCGTTTCTTTaGATCTTTTGCTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: VSQWIEASLSADGLASSTSTSFL*IFCSRR
Trigger: CCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGA...AGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp GGAGTCTGGCAACATGCACACGGTCATAATCACACAATATGTAACGTAAGTCAGTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GVWQHAHGHNHTICNVSQFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...CTGACTTACGTTACATATTGTGTGATTATGACCGTGTGCATGTTGCCAGACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAATGTCAATCTCCCCTTaGACCTTACCGATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQMSISP*TLPIFP
Trigger: AGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACAT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACATGAACTGCTGGAGATaGACTTGCCGCAACTCCTTA +
Preference number: 5 (lower is better)
Translates to: KPQWSIICRANYVQAIPYMNCWR*TCRNSL
Trigger: TAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCAT...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCCCCACTTGTTCATTTTaGCTTTTCTTGCCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSPTCSF*LFLPEL
Trigger: AAGCTCAGGCAAGAAAAGCAAAAATGAACAAGTGGG...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAGCACCCTAGGACACTaGTGTAGTGTAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSTLGH*CSVNQQ
Trigger: TTGCTGATTTACACTACACAAGTGTCCTAGGGTGCT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAGAAATTCTGATGAAGTaGTCAGAGAGGTTAACTGTG +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTEILMK*SERLTV
Trigger: CACAGTTAACCTCTCTGACAACTTCATCAGAATTTC...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACAGATTGTTTTGTCTTTTaGATACAGCTGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTDCFVF*IQLMAF
Trigger: GAAGGCCATCAGCTGTATCAAAAAGACAAAACAATC...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAAAGTCCAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAAAAAAGTCCAGCGTCTaGTGGAATAGATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: KSPASCGIDPLFIIGTNQKKSSV*WNRSSV
Trigger: AACAGAGGATCTATTCCACAAGACGCTGGACTTTTT...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGGACTTTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000539545.1
CDS-3UTR CAA 90 bp GAAGTTTACTGTCCTTGGTACCTCTGTTGGGTCTCCTCCCTAAAGACAGATAATACCAATAACAGAAACTaGTATTTCTCACAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: EVYCPWYLCWVSSLKTDNTNNRN*YFSQFW
Trigger: CCAGAACTGTGAGAAATACAAGTTTCTGTTATTGGT...ATTATCTGTCTTTAGGGAGGAGACCCAACAGAGGTACCAAGGACAGTAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp TCTGCAGACGGATTAGCTTCTTCAACTCATCTGCTGTTGTTTTGCAGTTATTCATCAACTCATCTGCTGTaGTTTTGCAGTTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: SADGLASSTHLLLFCSYSSTHLL*FCSYSA
Trigger: TGCTGAATAACTGCAAAACAACAGCAGATGAGTTGA...TGAATAACTGCAAAACAACAGCAGATGAGTTGAAGAAGCTAATCCGTCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTCTACATCGTTTCTTTaGATCTTTTGCTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSSTSFL*IFCSRR
Trigger: CCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp CTAAGCCAGTCACAAATTTCTCTTCACTCTTACTTAAGTCACGGCTTATTTATGATGTCAATCTCCCCTTaGACCTTACCGATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LSQSQISLHSYLSHGLFMMSISP*TLPIFP
Trigger: AGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACAT...CATAAATAAGCCGTGACTTAAGTAAGAGTGAAGAGAAATTTGTGACTGGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp TCTTTGTTCTTTAGCATCAGTGCACAGGGTATGGCTCCAAGTGGTATGCAATTTGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SLFFSISAQGMAPSGMQFENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...AAATTGCATACCACTTGGAGCCATACCCTGTGCACTGATGCTAAAGAACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp ATGCAGAGCAAATTATGTGCAAGCAATACCTTACCCATGGTGTGTACACCAACATTGCTAGGATGCTGCTaGTCCTTACTTAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: MQSKLCASNTLPMVCTPTLLGCC*SLLKVI
Trigger: AATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAA...TGTTGGTGTACACACCATGGGTAAGGTATTGCTTGCACATAATTTGCTCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACGCATACTGCCCCCATTaGTTTAAGGATATGATAGGA +
Preference number: 5 (lower is better)
Translates to: KPQWSIICRANYVQAIPYAYCPH*FKDMIG
Trigger: TCCTATCATATCCTTAAACAAATGGGGGCAGTATGC...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCTCTGTTTCTCAATGGATaGAAGCTTCTCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SISTSFLLIFCSRRTISSLFLNG*KLLCLQ
Trigger: CTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAG...AGAGGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCTACATCGTTTCTTTaGATCTTTTGCTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSTSFL*IFCSRR
Trigger: CCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp CTTTTCTCCAGACCCTTGCTGACACTTGCTATCTCTTATCTTTTTGACAATAGCTTTCTGTCTTATTTCTaGAAGTTGATCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LFSRPLLTLAISYLFDNSFLSYF*KLILQL
Trigger: CAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAA...GCTATTGTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381352.7
CDS-3UTR CAA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACCTAAGTAGAGCAGCATaGTCAGCATTCACTAAACCA +
Preference number: 5 (lower is better)
Translates to: KPQWSIICRANYVQAIPYLSRAA*SAFTKP
Trigger: TGGTTTAGTGAATGCTGACAATGCTGCTCTACTTAG...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGAAATTCTGATGAAGTaGTCAGAGAGGTTAACTGTG +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQEILMK*SERLTV
Trigger: CACAGTTAACCTCTCTGACAACTTCATCAGAATTTC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp CCATTACAGTTCTATCTTGGAAGATGTTTACAGAAATGGCTTCAAATGAACAGTATGTCCATTAATCCTTaGGCACCTCCTGTAAATGTC +
Preference number: 5 (lower is better)
Translates to: PLQFYLGRCLQKWLQMNSMSINP*APPVNV
Trigger: GACATTTACAGGAGGTGCCAAAGGATTAATGGACAT...ACTGTTCATTTGAAGCCATTTCTGTAAACATCTTCCAAGATAGAACTGTAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp TCCTCAATTTCTACATCGTTTCTTTTGATCTTTTGCTCTAGACGGACAATTTCCTCATCTGCTGTTGTTTaGCAGTTATTCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: SSISTSFLLIFCSRRTISSSAVV*QLFSTF
Trigger: AAAGGTGCTGAATAACTGCAAAACAACAGCAGATGA...GGAAATTGTCCGTCTAGAGCAAAAGATCAAAAGAAACGATGTAGAAATTGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611440.1
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAAGAAAACACAGTTTCTTaGTTCTTTAGCATCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQENTVS*FFSISA
Trigger: TGCACTGATGCTAAAGAACAAAGAAACTGTGTTTTC...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000541490.5
ENST00000542865.5
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATTGCTAGGATGCTGCTaGTCCTTACTTAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQLLGCC*SLLKVI
Trigger: AATAACTTTAAGTAAGGACAAGCAGCATCCTAGCAA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAACATACAGCGTCTTGTGGAATAGATCCTCTGTTCATCATTGGCACAAATCAATCTCTGAAGACCATTTaGCTCTTATTCACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: KHTASCGIDPLFIIGTNQSLKTI*LLFTEK
Trigger: TTTCTCTGTGAATAAGAGCAAAATGGTCTTCAGAGA...TTGATTTGTGCCAATGATGAACAGAGGATCTATTCCACAAGACGCTGTATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS-3UTR CAA 90 bp AAACCACAATGGTCCATAATATGCAGAGCAAATTATGTGCAAGCAATACCTTACAATGGCAAGATCAATTaGATAACTCCAAGAACCCAA +
Preference number: 5 (lower is better)
Translates to: KPQWSIICRANYVQAIPYNGKIN*ITPRTQ
Trigger: TTGGGTTCTTGGAGTTATCAAATTGATCTTGCCATT...GTAAGGTATTGCTTGCACATAATTTGCTCTGCATATTATGGACCATTGTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405154.6
ENST00000541490.5
CDS TCA 72 bp CTGCAGAATGCGGAGATTACTGGGGAGCTGCCGAGATaGACCAGGTCGCTTCAGGGACCCAGACTGGAATGG +
Preference number: 6 (lower is better)
Translates to: LQNAEITGELPR*TRSLQGPRLEW
Trigger: CCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS GCA 72 bp ATAGGATTCTGCAGAATGCGGAGATTACTGGGGAGCTaGCGAGATGAACCAGGTCGCTTCAGGGACCCAGAC +
Preference number: 6 (lower is better)
Translates to: IGFCRMRRLLGS*RDEPGRFRDPD
Trigger: GTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS CCA 72 bp TGCCGAGATGAACCAGGTCGCTTCAGGGACCCAGACTaGAATGGTGCCTCCCTTTCAATGTCTGCATGTGAG +
Preference number: 6 (lower is better)
Translates to: CRDEPGRFRDPD*NGASLSMSACE
Trigger: CTCACATGCAGACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS GCA 72 bp GGCTCCGCTGGCAAAACGGTAACTTTTGTCCCTGTCTaGTGGATGAACTGCTGGAGATTGACTTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: GSAGKTVTFVPV*WMNCWRLTCRN
Trigger: GTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTTGCCAGCGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 72 bp TATGCCTCCACAGTTCAACAGCCTCATCATCTTCTGTaGCTCTACCACTCTCCTCAGCAGGCAGGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: YASTVQQPHHLL*LYHSPQQAGVS
Trigger: GGAGACTCCTGCCTGCTGAGGAGAGTGGTAGAGGCACAGAAGATGATGAGGCTGTTGAACTGTGGAGGCATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538081.5
CDS TCA 72 bp CTTGAGGAAGGACAGCACCACACAGGTATTCTAGGATaGTCTACACAGGCACTCAGTTTCGCAACTGCGCCG +
Preference number: 6 (lower is better)
Translates to: LEEGQHHTGILG*STQALSFATAP
Trigger: CGGCGCAGTTGCGAAACTGAGTGCCTGTGTAGATCATCCTAGAATACCTGTGTGGTGCTGTCCTTCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381352.7
ENST00000535907.5
ENST00000538081.5
CDS GCA 72 bp AAGCTCAAAATCACTTTCACTGGGCTGAAATCAAAGTaGCAGCTGGGCCAGGGTCCCTCCAATGGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: KLKITFTGLKSK*QLGQGPSNGCR
Trigger: CCTGCAACCATTGGAGGGACCCTGGCCCAGCTGGCACTTTGATTTCAGCCCAGTGAAAGTGATTTTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS CCA 72 bp GAAGTTCATGATTATGGCACCAGCGGATCAGGTGTCTaGCAAGGGCTCACTTTTTGGTTCACGGATGGCACC +
Preference number: 6 (lower is better)
Translates to: EVHDYGTSGSGV*QGLTFWFTDGT
Trigger: GGTGCCATCCGTGAACCAAAAAGTGAGCCCTTGCCAGACACCTGATCCGCTGGTGCCATAATCATGAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542865.5
CDS CAA 90 bp TGGGCTGAAATCAAAGTGCCAGCTGGGCCAGGGTCCCTCCAATGGTaGCAGGAGAGAAAGCTTTCCTTGTTTTTCAAGCTGTTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WAEIKVPAGPGSLQW*QERKLSLFFKLLVA
Trigger: AGCCACCAACAGCTTGAAAAACAAGGAAAGCTTTCTCTCCTGCAACCATTGGAGGGACCCTGGCCCAGCTGGCACTTTGATTTCAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS GCA 72 bp TCACTGAGAGACGGCCCAGTTCGTCGTAGAATGAGCTaGACATCACTAGCATACTGCCCCCATTTGTTTAAG +
Preference number: 6 (lower is better)
Translates to: SLRDGPVRRRMS*TSLAYCPHLFK
Trigger: CTTAAACAAATGGGGGCAGTATGCTAGTGATGTGCAGCTCATTCTACGACGAACTGGGCCGTCTCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000535907.5
ENST00000541218.5
ENST00000541490.5
ENST00000542004.5
ENST00000542315.5
ENST00000542865.5
ENST00000545413.1
ENST00000611440.1
ENST00000615708.4
CDS CCA 72 bp GAAATCAAAGTGCCAGCTGGGCCAGGGTCCCTCCAATaGTTGCAGGAGAGAAAGCTTTCCTTGTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: EIKVPAGPGSLQ*LQERKLSLFFK
Trigger: CTTGAAAAACAAGGAAAGCTTTCTCTCCTGCAACCATTGGAGGGACCCTGGCCCAGCTGGCACTTTGATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS CAA 72 bp CGTTTGGTGGCTTGTCCAAGAGATCTTTCCACAGCTTaGATGCCATTTTCCAACCTCAGACTCTGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RLVACPRDLSTA*MPFSNLRLCWP
Trigger: AGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGATCTCTTGGACAAGCCACCAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS CAA 72 bp GGGTCCCTCCAATGGTTGCAGGAGAGAAAGCTTTCCTaGTTTTTCAAGCTGTTGGTGGCTTCAGGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: GSLQWLQERKLS*FFKLLVASGVP
Trigger: AGGAACACCTGAAGCCACCAACAGCTTGAAAAACAAGGAAAGCTTTCTCTCCTGCAACCATTGGAGGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS TCA 72 bp GTTTGGTGGCTTGTCCAAGAGATCTTTCCACAGCTTTaGTGCCATTTTCCAACCTCAGACTCTGCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: VWWLVQEIFPQL*CHFPTSDSAGL
Trigger: AAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGATCTCTTGGACAAGCCACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS TCA 72 bp CTTGAGGAAGGACAGCACCACACAGGTATTCTAGGATaGTCTACACAGGCACCTGCAAAGGTACATAGGGTT +
Preference number: 6 (lower is better)
Translates to: LEEGQHHTGILG*STQAPAKVHRV
Trigger: AACCCTATGTACCTTTGCAGGTGCCTGTGTAGATCATCCTAGAATACCTGTGTGGTGCTGTCCTTCCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541490.5
CDS GCA 72 bp GACCTGTGCCTCTTGAACTTCCCGTTGCAATTTTTCTaGTTCAAGACCACTTTCCATAGTCCGGATCTGTGC +
Preference number: 6 (lower is better)
Translates to: DLCLLNFPLQFF*FKTTFHSPDLC
Trigger: GCACAGATCCGGACTATGGAAAGTGGTCTTGAAGCAGAAAAATTGCAACGGGAAGTTCAAGAGGCACAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS CAA 72 bp CTTGTTTTTCAAGCTGTTGGTGGCTTCAGGTGTTCCTaGGCTTGTGACCACGTCACTCTAATCTATGCCTCC +
Preference number: 6 (lower is better)
Translates to: LVFQAVGGFRCS*ACDHVTLIYAS
Trigger: GGAGGCATAGATTAGAGTGACGTGGTCACAAGCCAAGGAACACCTGAAGCCACCAACAGCTTGAAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS CAA 72 bp TTGCAGGAGAGAAAGCTTTCCTTGTTTTTCAAGCTGTaGGTGGCTTCAGGTGTTCCTTGGCTTGTGACCACG +
Preference number: 6 (lower is better)
Translates to: LQERKLSLFFKL*VASGVPWLVTT
Trigger: CGTGGTCACAAGCCAAGGAACACCTGAAGCCACCAACAGCTTGAAAAACAAGGAAAGCTTTCTCTCCTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS GCA 72 bp AAAACGGTAACTTTTGTCCCTGTCTGCTGGATGAACTaGTGGAGATTGACTTGCCGCAACTCCTTAGTCAAC +
Preference number: 6 (lower is better)
Translates to: KTVTFVPVCWMN*WRLTCRNSLVN
Trigger: GTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAGCAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS GCA 72 bp ATGCCTTCAGGATTAAAACCAGATGAGATAGGATTCTaGAGAATGCGGAGATTACTGGGGAGCTGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: MPSGLKPDEIGF*RMRRLLGSCRD
Trigger: ATCTCGGCAGCTCCCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS GCA 72 bp TATGCCTCCACAGTTCAACAGCCTCATCATCTTCTGTaGCTCTACCACTCTCTTTTCTGGAAGCTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: YASTVQQPHHLL*LYHSLFWKLES
Trigger: ACTTTCCAGCTTCCAGAAAAGAGAGTGGTAGAGGCACAGAAGATGATGAGGCTGTTGAACTGTGGAGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538365.2
CDS CAA 90 bp TTCCACAGCTTTGATGCCATTTTCCAACCTCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTTGACCTTACCGATCTTTCCTTTAAC +
Preference number: 6 (lower is better)
Translates to: FHSFDAIFQPQTLLA*NVNLPFDLTDLSFN
Trigger: GTTAAAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS TCA 72 bp GAGAGGAAGTCAAGTTGTCTTTCTTTGCAGATGACATaGTCCAATATCTGGAAAACCCCATCGTCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: ERKSSCLSLQMT*SNIWKTPSSQP
Trigger: GGGCTGAGACGATGGGGTTTTCCAGATATTGGATCATGTCATCTGCAAAGAAAGACAACTTGACTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282884.13
ENST00000537946.5
CDS TCA 72 bp TTGATGCCATTTTCCAACCTCAGACTCTGCTGGCCTTaGATGTCAATCTCCCCTTTGACCTTACCGATCTTT +
Preference number: 6 (lower is better)
Translates to: LMPFSNLRLCWP*MSISPLTLPIF
Trigger: AAAGATCGGTAAGGTCAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS CAA 72 bp TTTGATGCCATTTTCCAACCTCAGACTCTGCTGGCCTaGAATGTCAATCTCCCCTTTGACCTTACCGATCTT +
Preference number: 6 (lower is better)
Translates to: FDAIFQPQTLLA*NVNLPFDLTDL
Trigger: AAGATCGGTAAGGTCAAAGGGGAGATTGACATTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000282884.13
ENST00000381352.7
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
ENST00000615708.4
CDS TCA 72 bp CTTGAGGAAGGACAGCACCACACAGGTATTCTAGGATaGTCTACACAGGCACCAATAACAGAAACTTGTATT +
Preference number: 6 (lower is better)
Translates to: LEEGQHHTGILG*STQAPITETCI
Trigger: AATACAAGTTTCTGTTATTGGTGCCTGTGTAGATCATCCTAGAATACCTGTGTGGTGCTGTCCTTCCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542865.5
CDS CAA 90 bp GAGAAAGAAATAAAGTGTAGTCAAATGGGAGGAGAGGAAGTCAAGTaGTCTTTCTTTGCAGATGACATGATCCAATATCTGGAAAACCCC +
Preference number: 6 (lower is better)
Translates to: EKEIKCSQMGGEEVK*SFFADDMIQYLENP
Trigger: GGGGTTTTCCAGATATTGGATCATGTCATCTGCAAAGAAAGACAACTTGACTTCCTCTCCTCCCATTTGACTACACTTTATTTCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282884.13
ENST00000537946.5
CDS TCA 72 bp ATGTCATACATATATGCCTTCAGGATTAAAACCAGATaGGATAGGATTCTGCAGAATGCGGAGATTACTGGG +
Preference number: 6 (lower is better)
Translates to: MSYIYAFRIKTR*DRILQNAEITG
Trigger: CCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCATATATGTATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282884.13
ENST00000405154.6
ENST00000539545.1
ENST00000541490.5
ENST00000542865.5
CDS CCA 72 bp TTTACATTTGTTTCAGTACAAAGTGCAGTAGTTTCCTaGAGATGCAGTAGCAAATTACCACAAACTGGGGGA +
Preference number: 6 (lower is better)
Translates to: FTFVSVQSAVVS*RCSSKLPQTGG
Trigger: TCCCCCAGTTTGTGGTAATTTGCTACTGCATCTCCAGGAAACTACTGCACTTTGTACTGAAACAAATGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538081.5
ENST00000538365.2
CDS CAA 72 bp ATAAAGTGTAGTCAAATGGGAGGAGAGGAAGTCAAGTaGTCTTTCTTTGCAGATGACATGATCCAATATCTG +
Preference number: 6 (lower is better)
Translates to: IKCSQMGGEEVK*SFFADDMIQYL
Trigger: CAGATATTGGATCATGTCATCTGCAAAGAAAGACAACTTGACTTCCTCTCCTCCCATTTGACTACACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282884.13
ENST00000537946.5