RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASSF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000266094

Ensembl transcript IDs: ENST00000577571.5, ENST00000579436.7, ENST00000579942.2, ENST00000580449.5, ENST00000581503.6, ENST00000581888.1, ENST00000605120.1, ENST00000605653.1, ENST00000636182.1

Found 1317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTC +
Preference number: 1 (lower is better)
Translates to: APGDPRVAVGGGRQC*RPMGNPSSPGPPLL
Trigger: GAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp TCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTaGACGCGGGCTCTCCTGGCCTTGTCTCCCACACCGCCGCCATTG +
Preference number: 1 (lower is better)
Translates to: SGTQMGGRSVTLNPY*TRALLALSPTPPPL
Trigger: CAATGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp GGCCAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACTCCAAGTTGGCCGAATTGGAGGCTC +
Preference number: 1 (lower is better)
Translates to: GQAHRLSERSAGSGP*FKTERTPSWPNWRL
Trigger: GAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 90 bp ACGGGGAGGCCAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGAAAGGACTCCAAGTTGGCCGAATTG +
Preference number: 1 (lower is better)
Translates to: TGRPGPPALRAQCRV*PMLQNRKDSKLAEL
Trigger: CAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTGGCCTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp AGAGTCCTGGCTGAAACACTGACCCCCAGGCCCATCACCCACCCCTaGTCACTCTCTCAACAGTCACCTTCCTGCCCGTGCTGCGTGGCT +
Preference number: 1 (lower is better)
Translates to: RVLAETLTPRPITHP*SLSQQSPSCPCCVA
Trigger: AGCCACGCAGCACGGGCAGGAAGGTGACTGTTGAGAGAGTGAGCAGGGGTGGGTGATGGGCCTGGGGGTCAGTGTTTCAGCCAGGACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp CTGCTCTTGCCTCCCTGCCCGGATTCCACAGATCTGAACACCACATaGGCAGCTGGACCCCTGGTGCTCAGGAGAAGCCCACAGCTCCCA +
Preference number: 1 (lower is better)
Translates to: LLLPPCPDSTDLNTT*AAGPLVLRRSPQLP
Trigger: TGGGAGCTGTGGGCTTCTCCTGAGCACCAGGGGTCCAGCTGCCCATGTGGTGTTCAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR TCA 90 bp AGTCAGGGACTCTGCTCTTGCCTCCCTGCCCGGATTCCACAGATCTaGACACCACATGGGCAGCTGGACCCCTGGTGCTCAGGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: SQGLCSCLPARIPQI*TPHGQLDPWCSGEA
Trigger: GGCTTCTCCTGAGCACCAGGGGTCCAGCTGCCCATGTGGTGTTCAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAGAGTCCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp GCTCTCCTGGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCAGAGCTTCAGGCAAACTCGCCCTAC +
Preference number: 1 (lower is better)
Translates to: ALLALSPTPPPLFTS*QEKPAAELQANSPY
Trigger: GTAGGGCGAGTTTGCCTGAAGCTCTGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp CTGCGTGGCTCCCACCTATGTGAGGTAGTTAGGACAACACCCACCTaGACCCACCCAGGGTGCCCTAAGGCCTGGGTTTGCACAATGGGT +
Preference number: 1 (lower is better)
Translates to: LRGSHLCEVVRTTPT*THPGCPKAWVCTMG
Trigger: ACCCATTGTGCAAACCCAGGCCTTAGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCTAACTACCTCACATAGGTGGGAGCCACGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp TGTCAGGCCCAGCAAGCAGGCGCAGGTAGAGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCACTGCAAACCAAGAGAGGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: CQAQQAGAGRGGGQQ*RVSGRALQTKRGCW
Trigger: CCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCCTCTACCTGCGCCTGCTTGCTGGGCCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp TTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: LAELEAPLSVIKATP*AAPGDPRVAVGGGR
Trigger: CCTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 90 bp GCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATaGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCAGGCACAAA +
Preference number: 1 (lower is better)
Translates to: AWGRAQLNPRANTCP*KRLLPQLELLGRHK
Trigger: TTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 90 bp CAATGGAGAGTTTCTGGAAGAGCACTGCAAACCAAGAGAGGGTGCTaGGAGCTCTTCCCAGAAAAGAAGGGCGGGGCCCAGGCTTGCGGG +
Preference number: 1 (lower is better)
Translates to: QWRVSGRALQTKRGC*ELFPEKKGGAQACG
Trigger: CCCGCAAGCCTGGGCCCCGCCCTTCTTTTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 90 bp TTCCTGAAGTCACATGCAGAGTCAGGGACTCTGCTCTTGCCTCCCTaGCCGGATTCCACAGATCTGAACACCACATGGGCAGCTGGACCC +
Preference number: 1 (lower is better)
Translates to: FLKSHAESGTLLLPP*PDSTDLNTTWAAGP
Trigger: GGGTCCAGCTGCCCATGTGGTGTTCAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAGAGTCCCTGACTCTGCATGTGACTTCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 90 bp CAGCAATGGAGAGTTTCTGGAAGAGCACTGCAAACCAAGAGAGGGTaGTGGGAGCTCTTCCCAGAAAAGAAGGGCGGGGCCCAGGCTTGC +
Preference number: 1 (lower is better)
Translates to: QQWRVSGRALQTKRG*WELFPEKKGGAQAC
Trigger: GCAAGCCTGGGCCCCGCCCTTCTTTTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 90 bp GCCGAGATCTTGACAGTGATGCTGGAACCACCCAGCCTCCCAACATaGAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACTCAG +
Preference number: 1 (lower is better)
Translates to: AEILTVMLEPPSLPT*RPSESRWRSGTWTQ
Trigger: CTGAGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGGGTGGTTCCAGCATCACTGTCAAGATCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp TCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGCACAGCCTGGGGGCGGGCACAGCTG +
Preference number: 1 (lower is better)
Translates to: SREDVSCLFHMSSDP*QNLWWGTAWGRAQL
Trigger: CAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 90 bp GTTAGGACAACACCCACCTGCACCCACCCAGGGTGCCCTAAGGCCTaGGTTTGCACAATGGGTCCAGACCTACCTCTACCTCTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: VRTTPTCTHPGCPKA*VCTMGPDLPLPLQF
Trigger: AAACTGGAGAGGTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR TCA 90 bp TTGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTGGTGGGGCACAGCCTGGGGGCGGGC +
Preference number: 1 (lower is better)
Translates to: LQIERGRQLFVSHEF*SLAESVVGHSLGAG
Trigger: GCCCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp GACCTACCTCTACCTCTCCAGTTTCATTCTCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCCCAGCAAGCAGGCGCAGGTAGAGGG +
Preference number: 1 (lower is better)
Translates to: DLPLPLQFHSPLAQS*GPPCQAQQAGAGRG
Trigger: CCCTCTACCTGCGCCTGCTTGCTGGGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGGAGAATGAAACTGGAGAGGTAGAGGTAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp GGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCTGAAGCTACACGAACAAGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: GVSIPSGIRGSMDSA*VREGTSEATRTSLG
Trigger: GCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp GATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTTGGGCTTGAACCGACCCAAGAGGGA +
Preference number: 1 (lower is better)
Translates to: DQGQYGLSLGQRGNF*SYTNKLGLEPTQEG
Trigger: TCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp AGATCAGGAAATGGGAGCCTAGGGTGTGGTTTTCCTGAAGTCACATaGAGAGTCAGGGACTCTGCTCTTGCCTCCCTGCCCGGATTCCAC +
Preference number: 1 (lower is better)
Translates to: RSGNGSLGCGFPEVT*RVRDSALASLPGFH
Trigger: GTGGAATCCGGGCAGGGAGGCAAGAGCAGAGTCCCTGACTCTGCATGTGACTTCAGGAAAACCACACCCTAGGCTCCCATTTCCTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 90 bp CAGGTAGAGGGGGCGGTCAGCAATGGAGAGTTTCTGGAAGAGCACTaGAAACCAAGAGAGGGTGCTGGGAGCTCTTCCCAGAAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: QVEGAVSNGEFLEEH*KPREGAGSSSQKRR
Trigger: CCTTCTTTTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCCTCTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp TGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAAC +
Preference number: 1 (lower is better)
Translates to: WRLCTVHTTRGQHSF*DQGQYGLSLGQRGN
Trigger: GTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp GACTTGGCCTCTGATGGCAGAAGGCAATTTGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCT +
Preference number: 1 (lower is better)
Translates to: DLASDGRRQFGLPSG*PKSTSPVRPTIETP
Trigger: AGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCATCAGAGGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp TGCACCAGGAGGAGAGGAAGCAGGACCGGTTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCTAAACTTGTCA +
Preference number: 1 (lower is better)
Translates to: CTRRRGSRTGYPGLP*DSLKASSSFCLNLS
Trigger: TGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCTTCCTCTCCTCCTGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp ACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACAAATGCACCTGCCAGAGATGTCCTG +
Preference number: 1 (lower is better)
Translates to: TLVQTLVHGRDFCHS*NCWAGTNAPARDVL
Trigger: CAGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 90 bp TCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATaGACTCAGCCTGGGTCAGAGAGGGAACTTCTGAAGCTACACGAA +
Preference number: 1 (lower is better)
Translates to: SYDEGSAFLLGSGAV*TQPGSERELLKLHE
Trigger: TTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp CGACCTGAGAGACCCTGCTGCCTTCCCCTTCCCAGTTCACATCCGTaGTTCACACACAGTTTGCTACTGAACAGACTGAATCAGCGAAGC +
Preference number: 1 (lower is better)
Translates to: RPERPCCLPLPSSHP*FTHSLLLNRLNQRS
Trigger: GCTTCGCTGATTCAGTCTGTTCAGTAGCAAACTGTGTGTGAATCACGGATGTGAACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp GACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTaGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTAGCT +
Preference number: 1 (lower is better)
Translates to: DLPLLVILRPWVAPA*FYSSLCHKTTHWLA
Trigger: AGCTAACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 90 bp ACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTaGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACAC +
Preference number: 1 (lower is better)
Translates to: TNTETFPCWSFSGHG*HRPGFTPVYATRLH
Trigger: GTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 90 bp AGGGAGATTTGTGGGAAGAAACAGAATAGGAGACAGGTTAGAAGTTaGCACGACCTGAGAGACCCTGCTGCCTTCCCCTTCCCAGTTCAC +
Preference number: 1 (lower is better)
Translates to: REICGKKQNRRQVRS*HDLRDPAAFPFPVH
Trigger: GTGAACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGGTCGTGTCAACTTCTAACCTGTCTCCTATTCTGTTTCTTCCCACAAATCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 90 bp GGCAATTTGGACTTCCATCAGGCTGACCCAAGAGCACAAGCCCTGTaGGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCACAATAGAG +
Preference number: 1 (lower is better)
Translates to: GNLDFHQADPRAQAL*GQQLRLLSSLSTIE
Trigger: CTCTATTGTGCTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCCAAATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 90 bp CAGCCTGTGCCTGAGCACAGGGAGTTTCTTGGTCCCCCTCCTCCCTaGGTTTTCAGAAATAAAGCACATGAAATCCTTTCTTTCCACAGG +
Preference number: 1 (lower is better)
Translates to: QPVPEHREFLGPPPP*VFRNKAHEILSFHR
Trigger: CCTGTGGAAAGAAAGGATTTCATGTGCTTTATTTCTGAAAACTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGCTCAGGCACAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 90 bp TGGATTTTGTCCTGCTCCTCTTTTTCCAGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAGGCATCCCACTGTGAGGCGAGAGGG +
Preference number: 1 (lower is better)
Translates to: WILSCSSFSRIVRKF*SSGMEKASHCEARG
Trigger: CCCTCTCGCCTCACAGTGGGATGCCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGACAAAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 90 bp AAGTCCACACAGGGAAGGTGGCGTAATCACAATCACAGAGCTCATTaGAGCAGAACTGGAACTAGAGCCCAGGTCTCCACACTTCAAAGT +
Preference number: 1 (lower is better)
Translates to: KSTQGRWRNHNHRAH*SRTGTRAQVSTLQS
Trigger: ACTTTGAAGTGTGGAGACCTGGGCTCTAGTTCCAGTTCTGCTGCAATGAGCTCTGTGATTGTGATTACGCCACCTTCCCTGTGTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 90 bp GAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAGACATGCAGGACGAAGGAAAATGAC +
Preference number: 1 (lower is better)
Translates to: EGGSQQHSQRLQQEP*LLLMLETCRTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp AAGAAATGGTTTCTCAGAGGCTGGGTTGGAAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTCCCTCTGCACTGGAGTGTCTCTGCA +
Preference number: 1 (lower is better)
Translates to: KKWFLRGWVGKPALL*KLQVLLPLHWSVSA
Trigger: TGCAGAGACACTCCAGTGCAGAGGGAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp TTTGTTGACAAAGATGTGACTAAGTACCACACATACGCAGATATATaGCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: FVDKDVTKYHTYADI*LWVSMCNVGQGQSQ
Trigger: CTGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTTAGTCACATCTTTGTCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 90 bp GTTTTCAGAAATAAAGCACATGAAATCCTTTCTTTCCACAGGCCTTaGCACACACAGGCCCTAATGTGCTACCCCAGGGTGTTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: VFRNKAHEILSFHRP*HTQALMCYPRVFRV
Trigger: GACTCTGAACACCCTGGGGTAGCACATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGAAAGGATTTCATGTGCTTTATTTCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 90 bp ACACAGTTTGCTACTGAACAGACTGAATCAGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCAACAAAATTCCAAATGCTGGCATCT +
Preference number: 1 (lower is better)
Translates to: TQFATEQTESAKPGL*MPVIAATKFQMLAS
Trigger: AGATGCCAGCATTTGGAATTTTGTTGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGCTGATTCAGTCTGTTCAGTAGCAAACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 90 bp TTGAACAGTAGCCTTCATTTCTCTGCTCACTGGCAAAAGAAAATCTaGCTCCACCAGGAAGCATGTGATCATGTCCATTCTCACCCTCTC +
Preference number: 1 (lower is better)
Translates to: LNSSLHFSAHWQKKI*LHQEACDHVHSHPL
Trigger: GAGAGGGTGAGAATGGACATGATCACATGCTTCCTGGTGGAGTCAGATTTTCTTTTGCCAGTGAGCAGAGAAATGAAGGCTACTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
3UTR GCA 90 bp TTGGAAAACCAGCCCTGCTTTGAAAATTACAAGTCCTTCTCCCTCTaGACTGGAGTGTCTCTGCAGTCCTGGCTACTTGTTGGAATTTTT +
Preference number: 1 (lower is better)
Translates to: LENQPCFENYKSFSL*TGVSLQSWLLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGCAGAGGGAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 90 bp GTGTCTGCTCAGAGTTTAAAGCATGATTCCATTCACATCATCTCCTaGAAGATTAGGAATGGTGGGGCAGATTCCTCCCATTGCACAGAT +
Preference number: 1 (lower is better)
Translates to: VSAQSLKHDSIHIIS*KIRNGGADSSHCTD
Trigger: ATCTGTGCAATGGGAGGAATCTGCCCCACCATTCCTAATCTTTCAGGAGATGATGTGAATGGAATCATGCTTTAAACTCTGAGCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 90 bp TTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCTTTGGGGAAACACATGACGATGATG +
Preference number: 1 (lower is better)
Translates to: FSYCLISILSRRLFK*SMTGFPLGKHMTMM
Trigger: CATCATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATCCTGGCTGAAACACTaGCCCCCAGGCCCATCACCC +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTSWLKH*PPGPSP
Trigger: GGGTGATGGGCCTGGGGGTCAGTGTTTCAGCCAGGA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAAGGACAACACCCACCTaGACCCACCCAGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGRTTPT*THPGCP
Trigger: AGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCCTTCCTGCCCGTGCTaGGTGGCTCCCACCTATGTG +
Preference number: 2 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGPSCPC*VAPTYV
Trigger: CACATAGGTGGGAGCCACGCAGCACGGGCAGGAAGG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCAACAGTCACCTTCCTaGCCGTGCTGCGTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGQQSPS*PCCVAP
Trigger: GGGAGCCACGCAGCACGGGCAGGAAGGTGACTGTTG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp GGGCACAGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: GHSLGAGTAEPSCKH*SMEETFATAGTAGQ
Trigger: CTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 90 bp GTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: VGRIGGSPLCNQGNS*GSTWRSQSRSGRRE
Trigger: CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGAAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: PASQHADPQKAGGGVERGRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCAACAGTCACCTTCCTaGCCGTGCTGCGTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFQQSPS*PCCVAP
Trigger: GGGAGCCACGCAGCACGGGCAGGAAGGTGACTGTTG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASAKPGL*MPVIAA
Trigger: TGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGC...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAAACGTCTATACCCAGTaGAGCCCAGAGATGGAGCTT +
Preference number: 2 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTNVYTQ*SPEMEL
Trigger: AAGCTCCATCTCTGGGCTCCACTGGGTATAGACGTT...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTCGGCCCTTGCTGAAATaGGGAGAAGGGACAGAGTCC +
Preference number: 2 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTRPLLK*GEGTES
Trigger: GGACTCTGTCCCTTCTCCCCATTTCAGCAAGGGCCG...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 2 (lower is better)
Translates to: QPPNMQTLRKQVEEWNVDLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...GTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: QPPNMQTLRKQVEEWNVDPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...GTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCAGAGCACAAGCCCTGTaGGGCCAACAATTGAGACTC +
Preference number: 2 (lower is better)
Translates to: DGREVCDPQPILNAGSPGRAQAL*GQQLRL
Trigger: GAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCTGGTTAGCTCCCCTTaGGGGATGGAGGTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASLVSSP*GMEVKK
Trigger: TTTCTTGACCTCCATCCCCCAAGGGGAGCTAACCAG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LEISEPASALVLLTLSIWGLPSG*PKSTSP
Trigger: AGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 2 (lower is better)
Translates to: SKLRHPDGREVCDPQPILRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: DGREVCDPQPILNAGSPGMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGCACAGGGAGTTTCTTaGTCCCCCTCCTCCCTGAGT +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFAQGVS*SPSSLS
Trigger: ACTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGCCCTCAGAAAGCAGGTaGAGGAGTGGAACGTGGACT +
Preference number: 2 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEPSESR*RSGTWT
Trigger: AGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGG...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGATTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: PASQHADPQKAGGGVERGFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACAAAACAGCCTGTGCCTaGGCACAGGGAGTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: QPPNMQTLRKQVEEWNVDKTACA*AQGVSW
Trigger: CCAAGAAACTCCCTGTGCTCAGGCACAGGCTGTTTT...GTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCAGCTGGACCCCTGGTaGTCAGGAGAAGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: EATIWLVKGLQIERGRQLQLDPW*SGEAHS
Trigger: GCTGTGGGCTTCTCCTGAGCACCAGGGGTCCAGCTG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGTTTCTGGAAGAGCACTaGAAACCAAGAGAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGFLEEH*KPREGA
Trigger: AGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAA...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFAKPGL*MPVIAA
Trigger: TGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGACCTGAGAGACCCTGCTaGCTTCCCCTTCCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRPERPC*LPLPSS
Trigger: TGAACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGG...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCGACCTGAGAGACCCTaGTGCCTTCCCCTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRRPERP*CLPLPS
Trigger: ACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGGTCG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKGLQIWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGGGTGCCCTAAGGCCTaGGTTTGCACAATGGGTCCA +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNGCPKA*VCTMGP
Trigger: TGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAAGTGGAGCCCAGAGATaGAGCTTGGTAGCCCTCGGG +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGRESGAQR*SLVALG
Trigger: CCCGAGGGCTACCAAGCTCCATCTCTGGGCTCCACT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTGGGTGGCACCGGCCTaGTTTTACTCCAGTTTATGC +
Preference number: 2 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEWVAPA*FYSSLC
Trigger: GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCA...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGATTCTCAGGCCATGGGTaGCACCGGCCTGGTTTTACT +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGFSGHG*HRPGFT
Trigger: AGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAA...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACCGGCCCTTGCTGAAATaGGGAGAAGGGACAGAGTCC +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNRPLLK*GEGTES
Trigger: GGACTCTGTCCCTTCTCCCCATTTCAGCAAGGGCCG...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp GCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTGGGCAGGCACAAATGCACCTGCCAG +
Preference number: 2 (lower is better)
Translates to: AQLNPRANTCPWKRL*PQLELLGRHKCTCQ
Trigger: CTGGCAGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGRELCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGATTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGATAATGAGAGCCTaGCTGGCCCAGGCCTACCCC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGQIMRA*LAQAYP
Trigger: GGGGTAGGCCTGGGCCAGTCAGGCTCTCATTATCTG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGATACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 2 (lower is better)
Translates to: TQIYAFGFPCAMWARARAHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: KLRHPDGREVCDPQPILNDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: LHLLPLIYSRERVSKGREWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGGGCAGCTGGACCCCTaGTGCTCAGGAGAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKGLQIGQLDP*CSGEAH
Trigger: GTGGGCTTCTCCTGAGCACCAGGGGTCCAGCTGCCC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCCACCACATGGGCAGCTaGACCCCTGGTGCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCHHMGS*TPGAQE
Trigger: CTCCTGAGCACCAGGGGTCCAGCTGCCCATGTGGTG...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGGTCATTCTCAGGCCATaGGTGGCACCGGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQVILRP*VAPAWF
Trigger: AAACCAGGCCGGTGCCACCCATGGCCTGAGAATGAC...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 90 bp TCTGAATGCACCAGGAGGAGAGGAAGCAGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: SECTRRRGSRTGYPG*PWDSLKASSSFCLN
Trigger: GTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCTTCCTCTCCTCCTGGTGCATTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR CAA 90 bp CAGTGCCGGGTCTGGCCCATGCTTCAAAACAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCT +
Preference number: 2 (lower is better)
Translates to: QCRVWPMLQNRKDSK*AELEAPLSVIKATP
Trigger: AGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp TCAGCCTGGGTCAGAGAGGGAACTTCTGAAGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAGAGGGACTTGGGAAGGCAGAGGATA +
Preference number: 2 (lower is better)
Translates to: SAWVREGTSEATRTS*GLNRPKRDLGRQRI
Trigger: TATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKGLQIGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGCCACTGAACACAGTGTaGCAAACACTGAGACCTTCC +
Preference number: 2 (lower is better)
Translates to: LEISEPASALVLLTLSIWPLNTV*QTLRPS
Trigger: GGAAGGTCTCAGTGTTTGTCACACTGTGTTCAGTGG...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 2 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGACATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCCTGCTCTTGCCTCCCTaGCCGGATTCCACAGATCTG +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGILLLPP*PDSTDL
Trigger: CAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAG...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCAGATTCCTCCCATTaGACAGATCAGGAAATGGGA +
Preference number: 2 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEADSSH*TDQEMG
Trigger: TCCCATTTCCTGATCTGTGCAATGGGAGGAATCTGC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 2 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGREHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACGATCTGAACACCACATaGGCAGCTGGACCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNDLNTT*AAGPLV
Trigger: CACCAGGGGTCCAGCTGCCCATGTGGTGTTCAGATC...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGTCATTCTCAGGCCATaGGTGGCACCGGCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIVILRP*VAPAWF
Trigger: AAACCAGGCCGGTGCCACCCATGGCCTGAGAATGAC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACCCTCAGAAAGCAGGTaGAGGAGTGGAACGTGGACT +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGREPSESR*RSGTWT
Trigger: AGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 2 (lower is better)
Translates to: TKENDSPPAPFNIQQGESGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp GTCTGGCCCATGCTTCAAAACAGAAAGGACTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCTTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: VWPMLQNRKDSKLAE*EAPLSVIKATPWAA
Trigger: TGCTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp TGGGTCAGAGAGGGAACTTCTGAAGCTACACGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGACTTGGGAAGGCAGAGGATAGCAAAG +
Preference number: 2 (lower is better)
Translates to: WVREGTSEATRTSLG*NRPKRDLGRQRIAK
Trigger: CTTTGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCCGGATTCCACAGATCTaGACACCACATGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIRIPQI*TPHGQL
Trigger: CAGCTGCCCATGTGGTGTTCAGATCTGTGGAATCCG...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGCCCTCGGGCCATTTTaGAGCAAAAACAGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIALGPF*SKNSLC
Trigger: GCACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCACACTTCAAAGTGCCTaGGCTTTCCACAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGTLQSA*AFHRAS
Trigger: GCTGGCCCTGTGGAAAGCTCAGGCACTTTGAAGTGT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACAGATAATGAGAGCCTaGCTGGCCCAGGCCTACCCC +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERQIMRA*LAQAYP
Trigger: GGGGTAGGCCTGGGCCAGTCAGGCTCTCATTATCTG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGREPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: AEPSCKHLSMEETFATAGLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: THTQIYAFGFPCAMWARALGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTCCCATCACCCACCCCTaGTCACTCTCTCAACAGTCA +
Preference number: 2 (lower is better)
Translates to: GGTGLVLLQFMPQDYTLVPITHP*SLSQQS
Trigger: TGACTGTTGAGAGAGTGAGCAGGGGTGGGTGATGGG...AACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCACACAGGCCCTAATGTaGTACCCCAGGGTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCTQALM*YPRVFR
Trigger: TCTGAACACCCTGGGGTAGCACATTAGGGCCTGTGT...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGTCTTTCCACAGGCCTTaGCACACACAGGCCCTAATG +
Preference number: 2 (lower is better)
Translates to: PKSTSPVRPTIETPKLFESFHRP*HTQALM
Trigger: CATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGA...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCTCCACACTTCAAAGTaGCTGAGCTTTCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRLHTSK*LSFPQG
Trigger: GCCCTGTGGAAAGCTCAGGCACTTTGAAGTGTGGAG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: THTQIYAFGFPCAMWARARLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAAAGTGGAGCCCAGAGATaGAGCTTGGTAGCCCTCGGG +
Preference number: 2 (lower is better)
Translates to: LHLLPLIYSRERVSKGRESGAQR*SLVALG
Trigger: CCCGAGGGCTACCAAGCTCCATCTCTGGGCTCCACT...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 90 bp GAAGCTACACGAACAAGCTTGGGCTTGAACCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCAAAGAAATGGTTTCTCAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: EATRTSLGLNRPKRD*GRQRIAKKWFLRGW
Trigger: CCAGCCTCTGAGAAACCATTTCTTTGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: THTQIYAFGFPCAMWARAFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAAGACAGGTTAGAAGTTaGCACGACCTGAGAGACCCT +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGRERQVRS*HDLRDP
Trigger: AGGGTCTCTCAGGTCGTGTCAACTTCTAACCTGTCT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: LEISEPASALVLLTLSIWGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGTTTCCTGAAGTCACATaGAGAGTCAGGGACTCTGCT +
Preference number: 2 (lower is better)
Translates to: SKLRHPDGREVCDPQPILFPEVT*RVRDSA
Trigger: AGCAGAGTCCCTGACTCTGCATGTGACTTCAGGAAA...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCCAAACCAAGAGAGGGTaGTGGGAGCTCTTCCCAGAA +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIQTKRG*WELFPE
Trigger: TTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTG...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: RGNYLVGERLADRERTSADFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ATQPKKALPAVTPTSGREMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCTTGCGGGAAAGGATTaGAAATGCAGAGGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: PKSTSPVRPTIETPKLFELAGKD*KCRGGV
Trigger: TACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAG...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGCAATGGAGAGTTTCTaGAAGAGCACTGCAAACCAA +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFAMESF*KSTANQ
Trigger: TTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR TCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCACTCTAGGCCTCCACTaGACACAGTGTGACAAACAC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGTLGLH*TQCDKH
Trigger: GTGTTTGTCACACTGTGTTCAGTGGAGGCCTAGAGT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCT +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLGLPSG*PKSTSP
Trigger: AGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCC...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LEISEPASALVLLTLSIWTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: GGTGLVLLQFMPQDYTLVHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...AACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKGLQIDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: THTQIYAFGFPCAMWARAMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: LHLLPLIYSRERVSKGREPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: LEISEPASALVLLTLSIWADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGCCCTCGGGCCATTTTaGAGCAAAAACAGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: TKENDSPPAPFNIQQGESALGPF*SKNSLC
Trigger: GCACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCACACTTCAAAGTGCCTaGGCTTTCCACAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVTLQSA*AFHRAS
Trigger: GCTGGCCCTGTGGAAAGCTCAGGCACTTTGAAGTGT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGCCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 2 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFLENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACAACGTCTATACCCAGTaGAGCCCAGAGATGGAGCTT +
Preference number: 2 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYNVYTQ*SPEMEL
Trigger: AAGCTCCATCTCTGGGCTCCACTGGGTATAGACGTT...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAAAAGGGAGGACAAATaGCTCAAAAACGTCTATACC +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFKREDK*LKNVYT
Trigger: GGTATAGACGTTTTTGAGCCATTTGTCCTCCCTTTT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGAGACCTTCCCCTGTTaGTCATTCTCAGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVETFPC*SFSGHG
Trigger: CCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIRLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCTCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGISSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: GGTGLVLLQFMPQDYTLVVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...AACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 2 (lower is better)
Translates to: RIQPKQEASANVSQEFDPWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 2 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAAGGGTGTGGTTTTCCTaGAGTCACATGCAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERRVWFS*SHMQSQ
Trigger: CTGACTCTGCATGTGACTTCAGGAAAACCACACCCT...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 2 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGICKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 2 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: RANTCPWKRLLPQLELLGTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 2 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGTTTTACTCCAGTTTATaGCACAAGACTACACACTGG +
Preference number: 2 (lower is better)
Translates to: SKLRHPDGREVCDPQPILFYSSL*HKTTHW
Trigger: CCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAA...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGGCACAGATCAGGAAATaGGAGCCTAGGGTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWAQIRK*EPRVWF
Trigger: AAACCACACCCTAGGCTCCCATTTCCTGATCTGTGC...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTC +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKG*QIERGRQLFVSHEF
Trigger: GAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 90 bp AAAGAAATGGTTTCTCAGAGGCTGGGTTGGAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCTCCCTCTGCACTGGAGTGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: KEMVSQRLGWKTSPA*KITSPSPSALECLC
Trigger: GCAGAGACACTCCAGTGCAGAGGGAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 2 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACTCGCTATGGATAAGTaGGAAACCTCAAGTCCACAC +
Preference number: 2 (lower is better)
Translates to: LHLLPLIYSRERVSKGRELAMDK*ETSSPH
Trigger: GTGTGGACTTGAGGTTTCTCACTTATCCATAGCGAG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: NYLVGERLADRERTSAVCHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGTCTTTCCACAGGCCTTaGCACACACAGGCCCTAATG +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKSFHRP*HTQALM
Trigger: CATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGA...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCAGCAAAAACAGCCTGTaGCTGAGCACAGGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGSKNSL*LSTGSF
Trigger: GAAACTCCCTGTGCTCAGGCACAGGCTGTTTTTGCT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCCTGGGTTTGCACAATaGGTCCAGACCTACCTCTAC +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKPGFAQ*VQTYLY
Trigger: GTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAATAAAGAAAGCAGATaGGAGCAGAGCGGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVNKESR*EQSGPC
Trigger: GCAAGGGCCGCTCTGCTCCCATCTGCTTTCTTTATT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGTTCAGCTACTGTCCATaGAGTACTTTTTCCAAACAT +
Preference number: 2 (lower is better)
Translates to: SKLRHPDGREVCDPQPILFSYCP*STFSKH
Trigger: ATGTTTGGAAAAAGTACTCCATGGACAGTAGCTGAA...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTGGCAGAAGGCAATTTaGACTTCCATCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVWQKAI*TSIRLT
Trigger: GGTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTCAGAGTTTAAAGCATaGTTCCATTCACATCATCTC +
Preference number: 2 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLSEFKA*FHSHHL
Trigger: GAGATGATGTGAATGGAATCATGCTTTAAACTCTGA...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 2 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: THTQIYAFGFPCAMWARAFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
3UTR-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCAAAAGGGAGGACAAATaGCTCAAAAACGTCTATACC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGKREDK*LKNVYT
Trigger: GGTATAGACGTTTTTGAGCCATTTGTCCTCCCTTTT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAAAATTCCAAATGCTaGCATCTCATGACCAAGAGT +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGQNSKC*HLMTKS
Trigger: ACTCTTGGTCATGAGATGCCAGCATTTGGAATTTTG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 90 bp TTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACTTGTTGGATTTTGTCCTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LPWDSLKASSSFCLN*SYFFCTCWILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR TCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: QFGDERGNYLVGERLADRTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 2 (lower is better)
Translates to: HTYADICLWVSMCNVGQGLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCTCATGACCAAGAGTTaGCAGTCTATGAACCATGTT +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLMTKS*QSMNHV
Trigger: AACATGGTTCATAGACTGGCAACTCTTGGTCATGAG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 2 (lower is better)
Translates to: LAFSYCLISILSRRLFKWHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 2 (lower is better)
Translates to: RGNYLVGERLADRERTSALSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 2 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 2 (lower is better)
Translates to: LHLLPLIYSRERVSKGREPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 2 (lower is better)
Translates to: SRASGKLALLLFLSENKKTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGACACAGGCCCTAATGTaGTACCCCAGGGTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LAFSYCLISILSRRLFKWTQALM*YPRVFR
Trigger: TCTGAACACCCTGGGGTAGCACATTAGGGCCTGTGT...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAACAAAATTCCAAATaGTGGCATCTCATGACCAAG +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGQQNSK*WHLMTK
Trigger: CTTGGTCATGAGATGCCAGCATTTGGAATTTTGTTG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVRRLFK*SMTGFP
Trigger: AGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 2 (lower is better)
Translates to: KYHTYADICLWVSMCNVGPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCAATAACCTTTTATCTTaGGTGTCTGCTCAGAGTTTA +
Preference number: 2 (lower is better)
Translates to: SSLVTREATIWLVKGLQINNLLS*VSAQSL
Trigger: TAAACTCTGAGCAGACACCCAAGATAAAAGGTTATT...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTTGGAAATGCAGAGGTaGGGTACGTACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKLEMQR*GTYNWK
Trigger: CTTCCAGTTGTACGTACCCCACCTCTGCATTTCCAA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 2 (lower is better)
Translates to: RIQPKQEASANVSQEFDPSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 2 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 2 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 2 (lower is better)
Translates to: RIQPKQEASANVSQEFDPPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCGGGCTCTCCTGGCCTaGTCTCCCACACCGCCGCCA +
Preference number: 3 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFRALLA*SPTPPP
Trigger: TGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 72 bp TGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTaGACTCAGGAGACCGGGGTTGGGCCTGACTCCACC +
Preference number: 3 (lower is better)
Translates to: CRPSESRWRSGT*TQETGVGPDST
Trigger: GGTGGAGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 72 bp CCAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGAAAGGACTCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: PGPPALRAQCRV*PMLQNRKDSKL
Trigger: CAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGGGCGGGGCCCAGGCTaGCGGGAAAGGATTGGAAAT +
Preference number: 3 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEGRGPG*RERIGN
Trigger: ATTTCCAATCCTTTCCCGCAAGCCTGGGCCCCGCCC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp ACACCCACCTGCACCCACCCAGGGTGCCCTAAGGCCTaGGTTTGCACAATGGGTCCAGACCTACCTCTACCT +
Preference number: 3 (lower is better)
Translates to: TPTCTHPGCPKA*VCTMGPDLPLP
Trigger: AGGTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCCTGGGTGGGTGCAGGTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGACCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCCCAGAGATGGAGCTaGGTAGCCCTCGGGCCATTT +
Preference number: 3 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEAQRWS*VALGPF
Trigger: AAATGGCCCGAGGGCTACCAAGCTCCATCTCTGGGC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 72 bp GGGCACAGCCTGGGGGCGGGCACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAAGAGACTTTTGCCACA +
Preference number: 3 (lower is better)
Translates to: GHSLGAGTAEPS*KHLSMEETFAT
Trigger: TGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 72 bp TCCCACCTATGTGAGGTAGTTAGGACAACACCCACCTaGACCCACCCAGGGTGCCCTAAGGCCTGGGTTTGC +
Preference number: 3 (lower is better)
Translates to: SHLCEVVRTTPT*THPGCPKAWVC
Trigger: GCAAACCCAGGCCTTAGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCTAACTACCTCACATAGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 72 bp CACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACTCCAAGTTGGCCGAAT +
Preference number: 3 (lower is better)
Translates to: HRLSERSAGSGP*FKTERTPSWPN
Trigger: ATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 3 (lower is better)
Translates to: DGREVCDPQPILNAGSPGWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 3 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 3 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: KLRHPDGREVCDPQPILNEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: SKLRHPDGREVCDPQPILEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCA +
Preference number: 3 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFRPKRD*GRQRIA
Trigger: TGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 72 bp AGGGCGGGGCCCAGGCTTGCGGGAAAGGATTGGAAATaGAGAGGTGGGGTACGTACAACTGGAAGTAGACAC +
Preference number: 3 (lower is better)
Translates to: RAGPRLAGKDWK*RGGVRTTGSRH
Trigger: GTGTCTACTTCCAGTTGTACGTACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAGCCTGGGCCCCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp GTTTCTGGAAGAGCACTGCAAACCAAGAGAGGGTGCTaGGAGCTCTTCCCAGAAAAGAAGGGCGGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: VSGRALQTKRGC*ELFPEKKGGAQ
Trigger: CTGGGCCCCGCCCTTCTTTTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp TTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: LEAPLSVIKATP*AAPGDPRVAVG
Trigger: TCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGACCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: LEISEPASALVLLTLSIWPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 72 bp TCACATGCAGAGTCAGGGACTCTGCTCTTGCCTCCCTaGCCGGATTCCACAGATCTGAACACCACATGGGCA +
Preference number: 3 (lower is better)
Translates to: SHAESGTLLLPP*PDSTDLNTTWA
Trigger: TGCCCATGTGGTGTTCAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAGAGTCCCTGACTCTGCATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 72 bp AGAGTTTCTGGAAGAGCACTGCAAACCAAGAGAGGGTaGTGGGAGCTCTTCCCAGAAAAGAAGGGCGGGGCC +
Preference number: 3 (lower is better)
Translates to: RVSGRALQTKRG*WELFPEKKGGA
Trigger: GGCCCCGCCCTTCTTTTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp GACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGCACAGCCTGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: DVSCLFHMSSDP*QNLWWGTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 72 bp CAGCAAGCAGGCGCAGGTAGAGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCACTGCAAACCAAGAGA +
Preference number: 3 (lower is better)
Translates to: QQAGAGRGGGQQ*RVSGRALQTKR
Trigger: TCTCTTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCCTCTACCTGCGCCTGCTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp CCCACCCAGGGTGCCCTAAGGCCTGGGTTTGCACAATaGGTCCAGACCTACCTCTACCTCTCCAGTTTCATT +
Preference number: 3 (lower is better)
Translates to: PTQGALRPGFAQ*VQTYLYLSSFI
Trigger: AATGAAACTGGAGAGGTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCCTGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR CCA 72 bp AGGGAGGACAAATGGCTCAAAAACGTCTATACCCAGTaGAGCCCAGAGATGGAGCTTGGTAGCCCTCGGGCC +
Preference number: 3 (lower is better)
Translates to: REDKWLKNVYTQ*SPEMELGSPRA
Trigger: GGCCCGAGGGCTACCAAGCTCCATCTCTGGGCTCCACTGGGTATAGACGTTTTTGAGCCATTTGTCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 72 bp TGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: CTVHTTRGQHSF*DQGQYGLSLGQ
Trigger: CTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGACGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 3 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGAGCGAAGCCTGGGCTTaGCATGCCTGTCATAGCAGC +
Preference number: 3 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRSEAWA*HACHSS
Trigger: GCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGCT...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 72 bp CTACCTCTCCAGTTTCATTCTCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCCCAGCAAGCAGGCGCA +
Preference number: 3 (lower is better)
Translates to: LPLQFHSPLAQS*GPPCQAQQAGA
Trigger: TGCGCCTGCTTGCTGGGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGGAGAATGAAACTGGAGAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 72 bp CCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATaGCACAAGACTACACACTGGTTAGCTCCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: PWVAPAWFYSSL*HKTTHWLAPLG
Trigger: CCCAAGGGGAGCTAACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 72 bp GAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTaGCACCGGCCTGGTTTTACTCCAGTTTATGCCACA +
Preference number: 3 (lower is better)
Translates to: ETFPCWSFSGHG*HRPGFTPVYAT
Trigger: TGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 3 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp AGGGAACTTCTGAAGCTACACGAACAAGCTTGGGCTTaGACCGACCCAAGAGGGACTTGGGAAGGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: RELLKLHEQAWA*TDPRGTWEGRG
Trigger: TCCTCTGCCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp CAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTTGGGCTTGAACCGACC +
Preference number: 3 (lower is better)
Translates to: QYGLSLGQRGNF*SYTNKLGLEPT
Trigger: GGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 72 bp GACTTCCATCAGGCTGACCCAAGAGCACAAGCCCTGTaGGGCCAACAATTGAGACTCCTAAGCTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: DFHQADPRAQAL*GQQLRLLSSLS
Trigger: GCTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 3 (lower is better)
Translates to: ATQPKKALPAVTPTSGRETGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: HTYADICLWVSMCNVGQGPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAAGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LHLLPLIYSRERVSKGREEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTGCTTGCGGGAAAGGATaGGAAATGCAGAGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: GGTGLVLLQFMPQDYTLVACGKG*EMQRWG
Trigger: ACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAGC...AACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACATGGCAGAAGGCAATTaGGACTTCCATCAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: KLRHPDGREVCDPQPILNMAEGN*DFHQAD
Trigger: GTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCAT...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp GAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTGGTGGGGCACAGCCTG +
Preference number: 3 (lower is better)
Translates to: ERGRQLFVSHEF*SLAESVVGHSL
Trigger: CAGGCTGTGCCCCACCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp TCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGCTTTATAAACTTCCCT +
Preference number: 3 (lower is better)
Translates to: SLSQPQLWCSLP*ASGASSFINFP
Trigger: AGGGAAGTTTATAAAGCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp CAGATCAGGAAATGGGAGCCTAGGGTGTGGTTTTCCTaGAGTCACATGCAGAGTCAGGGACTCTGCTCTTGC +
Preference number: 3 (lower is better)
Translates to: QIRKWEPRVWFS*SHMQSQGLCSC
Trigger: GCAAGAGCAGAGTCCCTGACTCTGCATGTGACTTCAGGAAAACCACACCCTAGGCTCCCATTTCCTGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR TCA 72 bp TCTGATGGCAGAAGGCAATTTGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCTGTGCGGCCAACAATT +
Preference number: 3 (lower is better)
Translates to: SDGRRQFGLPSG*PKSTSPVRPTI
Trigger: AATTGTTGGCCGCACAGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 72 bp CTTTTGCCACAGCTGGAACTGCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCTGAGAAAAAGTGTCTG +
Preference number: 3 (lower is better)
Translates to: LLPQLELLGRHK*TCQRCPEKKCL
Trigger: CAGACACTTTTTCTCAGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR GCA 72 bp ACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGGGCAGGCACAAATGCA +
Preference number: 3 (lower is better)
Translates to: TLVQTLVHGRDF*HSWNCWAGTNA
Trigger: TGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 72 bp CAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACAAATGCACCTGCCAGA +
Preference number: 3 (lower is better)
Translates to: QTLVHGRDFCHS*NCWAGTNAPAR
Trigger: TCTGGCAGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CCA 72 bp CTGTTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTaGTTTTACTCCAGTTTATGCCACAAGACTACACAC +
Preference number: 3 (lower is better)
Translates to: LLVILRPWVAPA*FYSSLCHKTTH
Trigger: GTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 3 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: LEISEPASALVLLTLSIWEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 3 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCAGCCCTCGGGCCATTTaGAAGCAAAAACAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: HTYADICLWVSMCNVGQGSPRAI*KQKQPV
Trigger: CACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGCT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGTCTCATGACCAAGAGTaGCCAGTCTATGAACCATGT +
Preference number: 3 (lower is better)
Translates to: LEISEPASALVLLTLSIWSHDQE*PVYEPC
Trigger: ACATGGTTCATAGACTGGCAACTCTTGGTCATGAGA...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCTGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: TQIYAFGFPCAMWARARACTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGAATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: PASQHADPQKAGGGVERGILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 3 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: RGNYLVGERLADRERTSAPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 3 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 3 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 3 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 3 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp AGAGTCCCAGCTGCCTTGATCCCTAAATCTCCGCAGTaGCTCCCAAAACTCCTTAAAACTCTAGGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: RVPAALIPKSPQ*LPKLLKTLGLH
Trigger: GTGGAGGCCTAGAGTTTTAAGGAGTTTTGGGAGTCACTGCGGAGATTTAGGGATCAAGGCAGCTGGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR TCA 72 bp TGTGGGAAGAAACAGAATAGGAGACAGGTTAGAAGTTaGCACGACCTGAGAGACCCTGCTGCCTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: CGKKQNRRQVRS*HDLRDPAAFPF
Trigger: GAAGGGGAAGGCAGCAGGGTCTCTCAGGTCGTGTCAACTTCTAACCTGTCTCCTATTCTGTTTCTTCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 72 bp GTGACTAAGTACCACACATACGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VTKYHTYADICL*VSMCNVGQGQS
Trigger: GCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTTAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: QFGDERGNYLVGERLADRPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 3 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 3 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGATTCTTTCCACAGGCCTaGCCACACACAGGCCCTAAT +
Preference number: 3 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERFFPQA*PHTGPN
Trigger: ATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGAA...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 3 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp AGACCCTGCTGCCTTCCCCTTCCCAGTTCACATCCGTaGTTCACACACAGTTTGCTACTGAACAGACTGAAT +
Preference number: 3 (lower is better)
Translates to: RPCCLPLPSSHP*FTHSLLLNRLN
Trigger: ATTCAGTCTGTTCAGTAGCAAACTGTGTGTGAATCACGGATGTGAACTGGGAAGGGGAAGGCAGCAGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: THTQIYAFGFPCAMWARAEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 3 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR TCA 72 bp AATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGGCACCCAGATGGGAGG +
Preference number: 3 (lower is better)
Translates to: NLILPVNVVWYH*LESKLRHPDGR
Trigger: CCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACTGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 3 (lower is better)
Translates to: KLRHPDGREVCDPQPILNLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 3 (lower is better)
Translates to: SSLVTREATIWLVKGLQIPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 3 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGATGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: QFGDERGNYLVGERLADRCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SSLVTREATIWLVKGLQILLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 3 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 3 (lower is better)
Translates to: ATQPKKALPAVTPTSGRESFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 72 bp GCTACTGAACAGACTGAATCAGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCAACAAAATTCCAAATG +
Preference number: 3 (lower is better)
Translates to: ATEQTESAKPGL*MPVIAATKFQM
Trigger: CATTTGGAATTTTGTTGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGCTGATTCAGTCTGTTCAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR GCA 72 bp AATGGTTTCTCAGAGGCTGGGTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCCTTCTCCCTCTGCACT +
Preference number: 3 (lower is better)
Translates to: NGFSEAGLENQP*FENYKSFSLCT
Trigger: AGTGCAGAGGGAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 3 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 3 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR TCA 72 bp AGCCTTCATTTCTCTGCTCACTGGCAAAAGAAAATCTaGCTCCACCAGGAAGCATGTGATCATGTCCATTCT +
Preference number: 3 (lower is better)
Translates to: SLHFSAHWQKKI*LHQEACDHVHS
Trigger: AGAATGGACATGATCACATGCTTCCTGGTGGAGTCAGATTTTCTTTTGCCAGTGAGCAGAGAAATGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
3UTR TCA 72 bp CAGAGTTTAAAGCATGATTCCATTCACATCATCTCCTaGAAGATTAGGAATGGTGGGGCAGATTCCTCCCAT +
Preference number: 3 (lower is better)
Translates to: QSLKHDSIHIIS*KIRNGGADSSH
Trigger: ATGGGAGGAATCTGCCCCACCATTCCTAATCTTTCAGGAGATGATGTGAATGGAATCATGCTTTAAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR GCA 72 bp GCTACTGTCCATGGAGTACTTTTTCCAAACATATTCTaGACAGATGCCAATAAAGAAAGCAGATGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: ATVHGVLFPNIF*TDANKESRWEQ
Trigger: CTGCTCCCATCTGCTTTCTTTATTGGCATCTGTGCAGAATATGTTTGGAAAAAGTACTCCATGGACAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR-3UTR CAA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 3 (lower is better)
Translates to: RIQPKQEASANVSQEFDPLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CCA 72 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTaGGTGTCTGCTCAGAGTTTAAAGCATGATTCCATT +
Preference number: 3 (lower is better)
Translates to: HDSNEQGNNLLS*VSAQSLKHDSI
Trigger: AATGGAATCATGCTTTAAACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
3UTR TCA 72 bp TGTAACTTAAAAACGAACAGTTTGTTGACAAAGATGTaGCTAAGTACCACACATACGCAGATATATGCCTTT +
Preference number: 3 (lower is better)
Translates to: CNLKTNSLLTKM*LSTTHTQIYAF
Trigger: AAAGGCATATATCTGCGTATGTGTGGTACTTAGTCACATCTTTGTCAACAAACTGTTCGTTTTTAAGTTACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAGCGGCTGCTCGAAGATaGTCCGCACGTCGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTAAARR*SARRGV
Trigger: GACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGC...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR CCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAACGGGCGCTGCCCGATaGCCGGGGACGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGTGAAR*PGTPWP
Trigger: TGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGGTGCAGCGCAGCGCCTaGCGCAGCACCTCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGVQRSA*RSTSRP
Trigger: CGGACGAGAGGTGCTGCGGCAGGCGCTGCGCTGCAC...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGTCCTGGCTGAAACACTaGCCCCCAGGCCCATCACCC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRESWLKH*PPGPSP
Trigger: GGGTGATGGGCCTGGGGGTCAGTGTTTCAGCCAGGA...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACCTCTCCCAGCAGTGTaGCCTCGAGCACAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTPLPAV*PRAQLS
Trigger: GGAAAGCTGTGCTCGAGGTCACACTGCTGGGAGAGG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGCCCAGGCCCTCCTCTaGTCTTTAGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGAQALL*SLAGEG
Trigger: GCCTTCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGAACTCGGCGAAGCAGTaGCCCTCGCCTCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEENSAKQ*PSPRSA
Trigger: GGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTT...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGAGGACAACACCCACCTaGACCCACCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGRTTPT*THPGCP
Trigger: AGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCCTCTCCCAGCAGTGTaGCCTCGAGCACAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREPLPAV*PRAQLS
Trigger: GGAAAGCTGTGCTCGAGGTCACACTGCTGGGAGAGG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATTCTGCTTGATCTCCTaGAGTGTGGGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTFCLIS*SVGGRC
Trigger: ACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCGCCCAGGCCCTCCTCTaGTCTTTAGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGAQALL*SLAGEG
Trigger: GCCTTCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGC...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGGCTCTCCGAGCGCAGTaGCGGGTCTGGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEALRAQ*RVWPML
Trigger: AAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGC...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACCTGAGAGACCCTGCTaGCTTCCCCTTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTPERPC*LPLPSS
Trigger: TGAACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCACGGGCGCTGCCCGATaGCCGGGGACGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLTGAAR*PGTPWP
Trigger: TGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGGTGAGGGTGCTTTCTaGAGAGGGTCTGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREGEGAF*RGSVPG
Trigger: TCCCGGGACAGACCCTCTCCAGAAAGCACCCTCACC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAGCACAGGGAGTTTCTTaGTCCCCCTCCTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTAQGVS*SPSSLS
Trigger: ACTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGC...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGTTCTGCTTGATCTCCTaGAGTGTGGGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGFCLIS*SVGGRC
Trigger: ACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAA...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGGGACGCCATGGCCATaGCCGGCTAGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNGTPWP*PASGGS
Trigger: GCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS-3UTR GCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTGCGGCTGCTCGAAGATaGTCCGCACGTCGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSAAARR*SARRGV
Trigger: GACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGC...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCCCCGAGCCGGGAGCTaGTCGGGTAGCGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGPRAGS*SGSGPG
Trigger: GCCTGGTCCGCTACCCGACCAGCTCCCGGCTCGGGG...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATTCTTGAGCAGCCCCTaGATGACCTCACTGACGGTG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTFLSSP*MTSLTV
Trigger: CACCGTCAGTGAGGTCATCCAGGGGCTGCTCAAGAA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGTCCTTGGGCAGCACCTaGAGATCCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRESLGST*RSQSRS
Trigger: ACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGA...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREAQCRV*PMLQNR
Trigger: TCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGTCATTCTCAGGCCATaGGTGGCACCGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGVILRP*VAPAWF
Trigger: AAACCAGGCCGGTGCCACCCATGGCCTGAGAATGAC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGTGGGAGGGAGGTCTGTaGCCCTCAACCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREWEGGL*PSTHTE
Trigger: TTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCA...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGACACTTCAAAGTGCCTaGGCTTTCCACAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGTLQSA*AFHRAS
Trigger: GCTGGCCCTGTGGAAAGCTCAGGCACTTTGAAGTGT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAAAGAGCCGCTGGAGCTaGGCAGTGACTGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGKSRWS*AVTVPK
Trigger: CTTTGGGACAGTCACTGCTCAGCTCCAGCGGCTCTT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR GCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCGGCGGGCCGCCTaGGTTTCTTTCAGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLSRRAA*VSFSGV
Trigger: CACCCCGCTGAAAGAAACGCAGGCGGCCCGCCGGCT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGLLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRELGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCGCCGCAGTCTCTGCTaGAGACCAGGCCGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCRRSLC*RPGRSG
Trigger: CCCGCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCGCCGCCGCAGTCTCTaGTGCAGACCAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQRRRSL*CRPGRS
Trigger: GCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCGGCG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCGCCGCCGCAGTCTCTaGTGCAGACCAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCRRRSL*CRPGRS
Trigger: GCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCGGCG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACTCGGCGAAGCAGTaGCCCTCGCCTCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILNSAKQ*PSPRSA
Trigger: GGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTT...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR CCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGTCCCCGGGCTCCGCTTaGCGTAAGCCCCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWSPGSA*RKPLAL
Trigger: CAGAGCTAGGGGCTTACGCCAAGCGGAGCCCGGGGA...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGAQCRV*PMLQNR
Trigger: TCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGC...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGAACGCGGGCTCTCCTaGCCTTGTCTCCCACACCGC +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFERGLS*PCLPHR
Trigger: GCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATCTCAGAGGCTGGGTTaGAAAACCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTSQRLG*KTSPAL
Trigger: CAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACATGGTTTCTCAGAGGCTaGGTTGGAAAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTWFLRG*VGKPAL
Trigger: CAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCA...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTGGTGAGGGTGCTTTCTaGAGAGGGTCTGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTGEGAF*RGSVPG
Trigger: TCCCGGGACAGACCCTCTCCAGAAAGCACCCTCACC...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCGGGTGCCCTAAGGCCTaGGTTTGCACAATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGGCPKA*VCTMGP
Trigger: TGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCC...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCCCTCAGAAAGCAGGTaGAGGAGTGGAACGTGGACT +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREPSESR*RSGTWT
Trigger: AGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGGATCTGGTGCTTTTTaGAGACCGAGCGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGGSGAF*RPSGSS
Trigger: CGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR TCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCTGTCGATCTTCTGCTTaGTCTCCTGCAGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGCRSSA*SPAVWA
Trigger: CGCCCACACTGCAGGAGATCAAGCAGAAGATCGACA...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEELCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCTGGGAGGGAGGTCTGTaGCCCTCAACCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASWEGGL*PSTHTE
Trigger: TTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCA...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAACACTTCAAAGTGCCTaGGCTTTCCACAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGTLQSA*AFHRAS
Trigger: GCTGGCCCTGTGGAAAGCTCAGGCACTTTGAAGTGT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGGACTCGTCCGGGCTCTaGGGTTTCGTGTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLDSSGL*GFVSPA
Trigger: CGCCGGGGACACGAAACCGCAGAGCCCGGACGAGTC...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGGTTCCTCGTCCAGGCTaGAGTACCCACTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEVPRPG*STHCSC
Trigger: GCATGAGCAGTGGGTACTGCAGCCTGGACGAGGAAC...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASLLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAGGCGGCTTTGGCGACTaGGCTACTCCCGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREGGFGD*ATPEPA
Trigger: GGCTGGCTCGGGAGTAGCGCAGTCGCCAAAGCCGCC...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCGCCGCAGTCTCTGCTaGAGACCAGGCCGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLRRSLC*RPGRSG
Trigger: CCCGCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCGCCGCAGTCTCTGCTaGAGACCAGGCCGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGRRSLC*RPGRSG
Trigger: CCCGCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCAACTCGGCGAAGCAGTaGCCCTCGCCTCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGNSAKQ*PSPRSA
Trigger: GGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTT...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCGTGCAGCGCAGCGCCTaGCGCAGCACCTCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARAVQRSA*RSTSRP
Trigger: CGGACGAGAGGTGCTGCGGCAGGCGCTGCGCTGCAC...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAACCCTCCTGCTGACTaGAGTCCAACTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGNPPAD*SPTGSG
Trigger: GCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR GCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCTCCACACTTCAAAGTaGCTGAGCTTTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRELHTSK*LSFPQG
Trigger: GCCCTGTGGAAAGCTCAGGCACTTTGAAGTGTGGAG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACAATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACGAACGCGGGCTCTCCTaGCCTTGTCTCCCACACCGC +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHERGLS*PCLPHR
Trigger: GCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTC...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCTTCTCCCTCTGCACTaGAGTGTCTCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGLLPLH*SVSAVL
Trigger: CAGGACTGCAGAGACACTCCAGTGCAGAGGGAGAAG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTGGCAGCGGCGGCTTTaGCGACTGCGCTACTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAWQRRL*RLRYSR
Trigger: TCGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCGCTCCGCCGGGACTCTaGGATCCTGCGGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGAPPGL*DPAAAR
Trigger: TCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGC...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGTGGGTGGCACCGGCCTaGTTTTACTCCAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREWVAPA*FYSSLC
Trigger: GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCA...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGAGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PASQHADPQKAGGGVERGGLPSG*PKSTSP
Trigger: AGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCC...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCTGCAGTACCCACTaGTCATGCTGCTGTCCACGG +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGGCSTH*SCCCPR
Trigger: CCGTGGACAGCAGCATGAGCAGTGGGTACTGCAGCC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEELLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCGCACTGGAGTGTCTCTaGAGTCCTGGCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASALECL*SPGYLL
Trigger: CAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGC...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCACTGGGATCCTGCGGCTaGTCGAAGATGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPLGSCG*SKMLRT
Trigger: CGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAG...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGGGACTCTGGGATCCTaGGGCTGCTCGAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWGTLGS*GCSKML
Trigger: GAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTGCAGCGCAGCGCCTaGCGCAGCACCTCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAVQRSA*RSTSRP
Trigger: CGGACGAGAGGTGCTGCGGCAGGCGCTGCGCTGCAC...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGACAACAGTCACCTTCCTaGCCGTGCTGCGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRQQSPS*PCCVAP
Trigger: GGGAGCCACGCAGCACGGGCAGGAAGGTGACTGTTG...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGATCCTTGGGCAGCACCTaGAGATCCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PASQHADPQKAGGGVERGSLGST*RSQSRS
Trigger: ACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGA...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGPLFTS*QEKPAA
Trigger: TGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGGAACGCGGGCTCTCCTaGCCTTGTCTCCCACACCGC +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRERGLS*PCLPHR
Trigger: GCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTC...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGGGCAGCTGGACCCCTaGTGCTCAGGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGGQLDP*CSGEAH
Trigger: GTGGGCTTCTCCTGAGCACCAGGGGTCCAGCTGCCC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGACGGGCGCTGCCCGATaGCCGGGGACGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWTGAAR*PGTPWP
Trigger: TGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGT...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTCCGCCGGGACTCTaGGATCCTGCGGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWAPPGL*DPAAAR
Trigger: TCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAGTGGAGCCCAGAGATaGAGCTTGGTAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFSGAQR*SLVALG
Trigger: CCCGAGGGCTACCAAGCTCCATCTCTGGGCTCCACT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGAAGCAGGTGGAGGAGTaGAACGTGGACTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEKQVEE*NVDSGD
Trigger: GTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTT...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGAACCTCTGCAGGATCTaGTGCTTTTTGGAGACCGAG +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRENLCRI*CFLETE
Trigger: CTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTT...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR TCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARAWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCAGATAATGAGAGCCTaGCTGGCCCAGGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYQIMRA*LAQAYP
Trigger: GGGGTAGGCCTGGGCCAGTCAGGCTCTCATTATCTG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFARARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGCTCTCCGAGCGCAGTaGCGGGTCTGGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGALRAQ*RVWPML
Trigger: AAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCCTAAGGCCTGGGTTTaGACAATGGGTCCAGACCTA +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEPKAWV*TMGPDL
Trigger: TAGGTCTGGACCCATTGTGCAAACCCAGGCCTTAGG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTCACCTTCCTGCCCGTaGTGCGTGGCTCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFASPSCP*CVAPTY
Trigger: ATAGGTGGGAGCCACGCAGCACGGGCAGGAAGGTGA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATCACCTTCCTGCCCGTaGTGCGTGGCTCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRSPSCP*CVAPTY
Trigger: ATAGGTGGGAGCCACGCAGCACGGGCAGGAAGGTGA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTTCTTTCCACAGGCCTTaGCACACACAGGCCCTAATG +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTSFHRP*HTQALM
Trigger: CATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGA...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEAKPGL*MPVIAA
Trigger: TGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCGACCTGAGAGACCCTaGTGCCTTCCCCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFARPERP*CLPLPS
Trigger: ACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGGTCG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAGGCTCTTCGGGAGCCTaGAGAAGAGCCGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREGSSGA*RRAAGA
Trigger: AGCTCCAGCGGCTCTTCTGCAGGCTCCCGAAGAGCC...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARAEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGTGCTGGAGGCCGATaGGGAACCCAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLSAGGR*GTQVAQ
Trigger: CTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAGTGCTGGAGGCCGATaGGGAACCCAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPSAGGR*GTQVAQ
Trigger: CTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGGAGGGAGGCAGTGCTaGAGGCCGATGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWGGRQC*RPMGNP
Trigger: TGGGTTCCCCATCGGCCTCCAGCACTGCCTCCCTCC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTCCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTPLFTS*QEKPAA
Trigger: TGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGG...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCACCACATGGGCAGCTaGACCCCTGGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGHHMGS*TPGAQE
Trigger: CTCCTGAGCACCAGGGGTCCAGCTGCCCATGTGGTG...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGATGGCCGGGGACGCCATaGCCATGCCCGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRWPGTP*PCPASG
Trigger: GCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCA...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCGCTCCGCCGGGACTCTaGGATCCTGCGGCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCAPPGL*DPAAAR
Trigger: TCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGC...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTTCTCAGGCCATGGGTaGCACCGGCCTGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEFSGHG*HRPGFT
Trigger: AGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAA...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGAGACCTTCCCCTGTTaGTCATTCTCAGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEETFPC*SFSGHG
Trigger: CCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTCGGCCCTTGCTGAAATaGGGAGAAGGGACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSRPLLK*GEGTES
Trigger: GGACTCTGTCCCTTCTCCCCATTTCAGCAAGGGCCG...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp ATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: IGGSPLCNQGNS*GSTWRSQSRSG
Trigger: CCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCTCGCGCCTCACTCCCTaGCTCGTCCGGGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGSRLTP*LVRALR
Trigger: CCGCAGAGCCCGGACGAGTCAGGGAGTGAGGCGCGA...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGGTGCTCCTTACCCTaGGCATCTGGGGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLWCSLP*ASGASS
Trigger: GCTACTGGCCCCAGATGCTCAGGGTAAGGAGCACCA...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGQRGNF*SYTNKL
Trigger: AAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACAAACACTTACACACTaGGCAACACAACCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTQTLTH*ATQPKK
Trigger: CTTCTTTGGTTGTGTTGCTCAGTGTGTAAGTGTTTG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTAGGGTGTGGTTTTCCTaGAGTCACATGCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTRVWFS*SHMQSQ
Trigger: CTGACTCTGCATGTGACTTCAGGAAAACCACACCCT...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR TCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACGGACTTCCATCAGGCTaGCCCAAGAGCACAAGCCCT +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYGLPSG*PKSTSP
Trigger: AGGGCTTGTGCTCTTGGGTCAGCCTGATGGAAGTCC...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCAGATAATGAGAGCCTaGCTGGCCCAGGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCQIMRA*LAQAYP
Trigger: GGGGTAGGCCTGGGCCAGTCAGGCTCTCATTATCTG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAATGCTGGCATCTCATaGCCAAGAGTTGCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGNAGIS*PRVASL
Trigger: TAGACTGGCAACTCTTGGTCATGAGATGCCAGCATT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCTCCCTCCGCCGCCGTaGAGAGCGCCATCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLPPPP*RAPSPH
Trigger: GTGCGGAGATGGCGCTCTGCACGGCGGCGGAGGGAG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACTTCTGCTTGATCTCCTaGAGTGTGGGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHFCLIS*SVGGRC
Trigger: ACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAA...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCCAGGCCCTCCTCTaGTCTTTAGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWAQALL*SLAGEG
Trigger: GCCTTCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACCTGCTCTTGCCTCCCTaGCCGGATTCCACAGATCTG +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNLLLPP*PDSTDL
Trigger: CAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAG...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGGCAGATTCCTCCCATTaGACAGATCAGGAAATGGGA +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGADSSH*TDQEMG
Trigger: TCCCATTTCCTGATCTGTGCAATGGGAGGAATCTGC...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTGGGACGCCATGGCCATaGCCGGCTAGTGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCGTPWP*PASGGS
Trigger: GCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCC...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS-3UTR GCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGCGGCTGCTCGAAGATaGTCCGCACGTCGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIAAARR*SARRGV
Trigger: GACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGGGGACTCTGGGATCCTaGGGCTGCTCGAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQGTLGS*GCSKML
Trigger: GAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCC...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR GCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGAGGACAACACCCACCTaGACCCACCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWRTTPT*THPGCP
Trigger: AGGGCACCCTGGGTGGGTGCAGGTGGGTGTTGTCCT...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCGACCTGAGAGACCCTaGTGCCTTCCCCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFERPERP*CLPLPS
Trigger: ACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGGTCG...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTGGCAGAATCTGTGGTaGGGCACAGCCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCWQNLW*GTAWGR
Trigger: CCGCCCCCAGGCTGTGCCCCACCACAGATTCTGCCA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTAGTGCTGGAGGCCGATaGGGAACCCAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGSAGGR*GTQVAQ
Trigger: CTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATCCTTGGGCAGCACCTaGAGATCCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPSLGST*RSQSRS
Trigger: ACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTSMDSA*VREGTS
Trigger: AGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACT...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTCTTGCGGGAAAGGATTaGAAATGCAGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTLAGKD*KCRGGV
Trigger: TACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAG...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACA +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEQAAAF*VTGEFT
Trigger: TGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGGGTGAGGGTGCTTTCTaGAGAGGGTCTGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLGEGAF*RGSVPG
Trigger: TCCCGGGACAGACCCTCTCCAGAAAGCACCCTCACC...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp AAGAAGGGCGGGGCCCAGGCTTGCGGGAAAGGATTGGAAATGCAGAGGTGGGGTGGTTTACAGACATTCTaGCTGAAGGTCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KKGGAQACGKGLEMQRWGGLQTF*LKVTVR
Trigger: CCTCACCGTGACCTTCAGCCAGAATGTCTGTAAACC...ACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAGCCTGGGCCCCGCCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGAGTGGAGCCCAGAGATaGAGCTTGGTAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRSGAQR*SLVALG
Trigger: CCCGAGGGCTACCAAGCTCCATCTCTGGGCTCCACT...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGTCATTCTCAGGCCATaGGTGGCACCGGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNVILRP*VAPAWF
Trigger: AAACCAGGCCGGTGCCACCCATGGCCTGAGAATGAC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp ACCAGGAGGAGAGGAAGCAGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TRRRGSRTGYPG*PWDSLKASSSF
Trigger: GAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCTTCCTCTCCTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp CTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTTGCCACAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LGAGTAEPSCKH*SMEETFATAGT
Trigger: AGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGIVRKF*SSGMEK
Trigger: CTTCTCCATCCCTGAACTTCAGAACTTCCTAACAAT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGAACAAGCTTGGGCTTaGACCGACCCAAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTREQAWA*TDPRGT
Trigger: AGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEQRGNF*SYTNKL
Trigger: AAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGACAGGACGAAGGAAAATaGCTCTCCACCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGQDEGK*LSTCSL
Trigger: AAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCCTG...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGGAGACGTTTCTAACATaGGTCATTTTTGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRREETFLT*VIFATG
Trigger: GCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTC...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTAAAACAGCCTGTGCCTaGGCACAGGGAGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSKTACA*AQGVSW
Trigger: CCAAGAAACTCCCTGTGCTCAGGCACAGGCTGTTTT...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCCCTCGGGCCATTTTaGAGCAAAAACAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNALGPF*SKNSLC
Trigger: GCACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCGCCCTCGGGCCATTTTaGAGCAAAAACAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARAALGPF*SKNSLC
Trigger: GCACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGC...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTCAGTGTGACAAACACTaGGACCTTCCCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSQCDKH*DLPLLV
Trigger: GACCAACAGGGGAAGGTCTCAGTGTTTGTCACACTG...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTCTCGCTATGGATAAGTaGGAAACCTCAAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTLAMDK*ETSSPH
Trigger: GTGTGGACTTGAGGTTTCTCACTTATCCATAGCGAG...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGAAGTTGACACGACCTaGGAGACCCTGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITEVDTT*ETLLPS
Trigger: GGAAGGCAGCAGGGTCTCTCAGGTCGTGTCAACTTC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGAAGGCATCCCACTGTaGGGCGAGAGGGAGATTTGT +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNEGIPL*GEREIC
Trigger: ACAAATCTCCCTCTCGCCTCACAGTGGGATGCCTTC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGCTGGAGCTGAGCAGTaGCTGTCCCAAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIAGAEQ*LSQSRQ
Trigger: CTGCCTGCTTTGGGACAGTCACTGCTCAGCTCCAGC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR GCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAACCCACTGCTCATGCTaGTGTCCACGGTCATCTACC +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPTHCSC*CPRSST
Trigger: GGTAGATGACCGTGGACAGCAGCATGAGCAGTGGGT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAGTACCCACTGCTCATaGTGCTGTCCACGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFSTHCS*CCPRSS
Trigger: AGATGACCGTGGACAGCAGCATGAGCAGTGGGTACT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGAAGCTCTGGAGACTATaGACAGTTCATACGACGAGG +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEKLWRL*TVHTTR
Trigger: CCTCGTCGTATGAACTGTGCATAGTCTCCAGAGCTT...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAACCCTCCTGCTGACTaGAGTCCAACTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYNPPAD*SPTGSG
Trigger: GCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCCCATCACCCACCCCTaGTCACTCTCTCAACAGTCA +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAPITHP*SLSQQS
Trigger: TGACTGTTGAGAGAGTGAGCAGGGGTGGGTGATGGG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCCCAGCCTCCCAACATaGAGACCCTCAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITPSLPT*RPSESR
Trigger: CCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGGG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACAACAAAATTCCAAATaGTGGCATCTCATGACCAAG +
Preference number: 4 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTQQNSK*WHLMTK
Trigger: CTTGGTCATGAGATGCCAGCATTTGGAATTTTGTTG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCCTGAGAGACCCTGCTaGCTTCCCCTTCCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQPERPC*LPLPSS
Trigger: TGAACTGGGAAGGGGAAGGCAGCAGGGTCTCTCAGG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACCCTCCGGGCCCCGTTaGGGAACCTCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREPSGPR*GTSAGS
Trigger: AGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTTCTTGAGCAGCCCCTaGATGACCTCACTGACGGTG +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYFLSSP*MTSLTV
Trigger: CACCGTCAGTGAGGTCATCCAGGGGCTGCTCAAGAA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRGGGQQ*RVSGRA
Trigger: TGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNGGGQQ*RVSGRA
Trigger: TGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARARLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHRLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAACGCGGGCTCTCCTaGCCTTGTCTCCCACACCGC +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIERGLS*PCLPHR
Trigger: GCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGGQHSF*DQGQYG
Trigger: TCCATACTGCCCCTGATCCCAGAAGGAATGCTGACC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCAGTTACTCCCACCTCTaGGAGGGAACGGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFASYSHL*EGTGTR
Trigger: TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACT...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGTTACTCCCACCTCTaGGAGGGAACGGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLSYSHL*EGTGTR
Trigger: TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGATCTGAACACCACATaGGCAGCTGGACCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITDLNTT*AAGPLV
Trigger: CACCAGGGGTCCAGCTGCCCATGTGGTGTTCAGATC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGGTGAGGGTGCTTTCTaGAGAGGGTCTGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGGEGAF*RGSVPG
Trigger: TCCCGGGACAGACCCTCTCCAGAAAGCACCCTCACC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGACCTGGGTTTGCACAATaGGTCCAGACCTACCTCTAC +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGPGFAQ*VQTYLY
Trigger: GTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGG...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGGGGTGCCCTAAGGCCTaGGTTTGCACAATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEGCPKA*VCTMGP
Trigger: TGGACCCATTGTGCAAACCCAGGCCTTAGGGCACCC...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTCACAAGACTACACACTaGTTAGCTCCCCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSHKTTH*LAPLGG
Trigger: TCCCCCAAGGGGAGCTAACCAGTGTGTAGTCTTGTG...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAGCAGGTGGAGGAGTaGAACGTGGACTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARAKQVEE*NVDSGD
Trigger: GTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTT...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp GAGGGAACTTCTGAAGCTACACGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGACTTGGGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EGTSEATRTSLG*NRPKRDLGRQR
Trigger: CCTCTGCCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLLCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGATTTTTAAATGGTCAATaGCTGGCTTCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGFLNGQ*LASLWG
Trigger: TCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAA...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCTTTTTAAATGGTCAATaGCTGGCTTCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASFLNGQ*LASLWG
Trigger: TCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAA...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTGGGAGGGAGGTCTGTaGCCCTCAACCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGWEGGL*PSTHTE
Trigger: TTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGKPALL*KLQVLL
Trigger: GAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCGAACAAGCTTGGGCTTaGACCGACCCAAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCEQAWA*TDPRGT
Trigger: AGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTC...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCACAGGACGAAGGAAAATaGCTCTCCACCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPQDEGK*LSTCSL
Trigger: AAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCCTG...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCAGGACGAAGGAAAATaGCTCTCCACCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAQDEGK*LSTCSL
Trigger: AAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCCTG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCAAACACTTACACACTaGGCAACACAACCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASQTLTH*ATQPKK
Trigger: CTTCTTTGGTTGTGTTGCTCAGTGTGTAAGTGTTTG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCGATAAACCCTCCTGCTaGCTGCAGTCCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFADKPSC*LQSNWI
Trigger: GATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATC...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR TCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGTGTCCGTAAGATGGTaGAGTTCAAGGGAGACGTTT +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEVSVRW*SSRETF
Trigger: AAACGTCTCCCTTGAACTTCACCATCTTACGGACAC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGTCCTGGCTGAAACACTaGCCCCCAGGCCCATCACCC +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWSWLKH*PPGPSP
Trigger: GGGTGATGGGCCTGGGGGTCAGTGTTTCAGCCAGGA...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCGAAGGCATCCCACTGTaGGGCGAGAGGGAGATTTGT +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCEGIPL*GEREIC
Trigger: ACAAATCTCCCTCTCGCCTCACAGTGGGATGCCTTC...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYLRHSG*QVNLQS
Trigger: GGACTGTAAATTCACCTGTCACCCAGAATGCCGCAG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTTCTGCTTGATCTCCTaGAGTGTGGGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARAFCLIS*SVGGRC
Trigger: ACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITLLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGCCCAGGCCCTCCTCTaGTCTTTAGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRAQALL*SLAGEG
Trigger: GCCTTCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTGCTCTCCGAGCGCAGTaGCGGGTCTGGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCALRAQ*RVWPML
Trigger: AAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGC...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACGGCGGGGCCCAGGCTTaGGGGAAAGGATTGGAAATG +
Preference number: 4 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYGGAQA*GKGLEM
Trigger: CATTTCCAATCCTTTCCCGCAAGCCTGGGCCCCGCC...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACTGGGATCCTGCGGCTaGTCGAAGATGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERLGSCG*SKMLRT
Trigger: CGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR GCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCAACCCTCCTGCTGACTaGAGTCCAACTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITNPPAD*SPTGSG
Trigger: GCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTT...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACCTTCCTGCCCGTGCTaGGTGGCTCCCACCTATGTG +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERPSCPC*VAPTYV
Trigger: CACATAGGTGGGAGCCACGCAGCACGGGCAGGAAGG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACACACAGGCCCTAATGTaGTACCCCAGGGTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYTQALM*YPRVFR
Trigger: TCTGAACACCCTGGGGTAGCACATTAGGGCCTGTGT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCTCTTTCCACAGGCCTTaGCACACACAGGCCCTAATG +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARASFHRP*HTQALM
Trigger: CATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGA...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGACTCCACACTTCAAAGTaGCTGAGCTTTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRLHTSK*LSFPQG
Trigger: GCCCTGTGGAAAGCTCAGGCACTTTGAAGTGTGGAG...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGRLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACTTCTCCCTCTGCACTaGAGTGTCTCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGRELLPLH*SVSAVL
Trigger: CAGGACTGCAGAGACACTCCAGTGCAGAGGGAGAAG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCTTCTCCCTCTGCACTaGAGTGTCTCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQLLPLH*SVSAVL
Trigger: CAGGACTGCAGAGACACTCCAGTGCAGAGGGAGAAG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTTCTCCCTCTGCACTaGAGTGTCTCTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGLLPLH*SVSAVL
Trigger: CAGGACTGCAGAGACACTCCAGTGCAGAGGGAGAAG...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLGQHSF*DQGQYG
Trigger: TCCATACTGCCCCTGATCCCAGAAGGAATGCTGACC...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGTTGCCTTTGAAGCTCTaGAGACTATGCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGLPLKL*RLCTVH
Trigger: ATGAACTGTGCATAGTCTCCAGAGCTTCAAAGGCAA...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCTTGCCTTTGAAGCTCTaGAGACTATGCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: DGREVCDPQPILNAGSPGLPLKL*RLCTVH
Trigger: ATGAACTGTGCATAGTCTCCAGAGCTTCAAAGGCAA...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGAGTTACTCCCACCTCTaGGAGGGAACGGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQSYSHL*EGTGTR
Trigger: TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACT...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCTGGTTAGCTCCCCTTaGGGGATGGAGGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLLVSSP*GMEVKK
Trigger: TTTCTTGACCTCCATCCCCCAAGGGGAGCTAACCAG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACGGCCCTTGCTGAAATaGGGAGAAGGGACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGRPLLK*GEGTES
Trigger: GGACTCTGTCCCTTCTCCCCATTTCAGCAAGGGCCG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp GTCAGAGAGGGAACTTCTGAAGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAGAGGGACTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VREGTSEATRTS*GLNRPKRDLGR
Trigger: CCTTCCCAAGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTIVRKF*SSGMEK
Trigger: CTTCTCCATCCCTGAACTTCAGAACTTCCTAACAAT...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTKPALL*KLQVLL
Trigger: GAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTT...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGAACAAGCTTGGGCTTaGACCGACCCAAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIEQAWA*TDPRGT
Trigger: AGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGAACAAGCTTGGGCTTaGACCGACCCAAGAGGGACT +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWEQAWA*TDPRGT
Trigger: AGTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCAGGACGAAGGAAAATaGCTCTCCACCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRQDEGK*LSTCSL
Trigger: AAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCCTG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCAGGACGAAGGAAAATaGCTCTCCACCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCQDEGK*LSTCSL
Trigger: AAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCCTG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACGGATTCCACAGATCTaGACACCACATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGRIPQI*TPHGQL
Trigger: CAGCTGCCCATGTGGTGTTCAGATCTGTGGAATCCG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGACTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGLRHSG*QVNLQL
Trigger: TAACTGTAAATTCACCTGTCACCCAGAATGCCGCAG...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR TCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGGATAAACCCTCCTGCTaGCTGCAGTCCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRDKPSC*LQSNWI
Trigger: GATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATC...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR TCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCCACCAGGAAGCATGTaGTCATGTCCATTCTCACCC +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGPPGSM*SCPFSP
Trigger: GGGTGAGAATGGACATGATCACATGCTTCCTGGTGG...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCAGTGTGACAAACACTaGGACCTTCCCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEQCDKH*DLPLLV
Trigger: GACCAACAGGGGAAGGTCTCAGTGTTTGTCACACTG...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCCACTGAACACAGTGTaGCAAACACTGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAPLNTV*QTLRPS
Trigger: GGAAGGTCTCAGTGTTTGTCACACTGTGTTCAGTGG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACACTCTAGGCCTCCACTaGACACAGTGTGACAAACAC +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHTLGLH*TQCDKH
Trigger: GTGTTTGTCACACTGTGTTCAGTGGAGGCCTAGAGT...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAAAGGACTTGGCCTCTaGTGGCAGAAGGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPKGLGL*WQKAIW
Trigger: CCAAATTGCCTTCTGCCATCAGAGGCCAAGTCCTTT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAATTCTGGGTGACAGGTaGATTTACAGTCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREILGDR*IYSPEP
Trigger: GGGCTCGGGACTGTAAATTCACCTGTCACCCAGAAT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: QPPNMQTLRKQVEEWNVDASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...GTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGCTGGGCAGGCACAAATaGACCTGCCAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWLGRHK*TCQRCP
Trigger: AGGACATCTCTGGCAGGTGCATTTGTGCCTGCCCAG...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARAHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGAGGGCCAGGGCAGGCTaGAGCTTCTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWRARAG*SFSGDL
Trigger: GAGATCTCCAGAGAAGCTGCAGCCTGCCCTGGCCCT...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGCCCAGGCCCTCCTCTaGTCTTTAGCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESAQALL*SLAGEG
Trigger: GCCTTCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGGCACTGGAGTGTCTCTaGAGTCCTGGCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQALECL*SPGYLL
Trigger: CAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGC...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAAAGCTCTGGAGACTATaGACAGTTCATACGACGAGG +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGKLWRL*TVHTTR
Trigger: CCTCGTCGTATGAACTGTGCATAGTCTCCAGAGCTT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGTTAATGTTAGAGACATaGAGGACGAAGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRELMLET*RTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAA...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGTTTCCTGAAGTCACATaGAGAGTCAGGGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWFPEVT*RVRDSA
Trigger: AGCAGAGTCCCTGACTCTGCATGTGACTTCAGGAAA...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCAAACCAAGAGAGGGTaGTGGGAGCTCTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEQTKRG*WELFPE
Trigger: TTCTGGGAAGAGCTCCCAGCACCCTCTCTTGGTTTG...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTCGCCGCCGCAGTCTCTaGTGCAGACCAGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPRRRSL*CRPGRS
Trigger: GCTCCGGCCTGGTCTGCAGCAGAGACTGCGGCGGCG...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCTGGGATCCTGCGGCTaGTCGAAGATGCTCCGCACG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLGSCG*SKMLRT
Trigger: CGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000581503.6
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGAACCCTCCTGCTGACTaGAGTCCAACTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLNPPAD*SPTGSG
Trigger: GCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCCTTCCTGCCCGTGCTaGGTGGCTCCCACCTATGTG +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGPSCPC*VAPTYV
Trigger: CACATAGGTGGGAGCCACGCAGCACGGGCAGGAAGG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGACACAGGCCCTAATGTaGTACCCCAGGGTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFETQALM*YPRVFR
Trigger: TCTGAACACCCTGGGGTAGCACATTAGGGCCTGTGT...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGCGAAGCCTGGGCTTTaGATGCCTGTCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGAKPGL*MPVIAA
Trigger: TGCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTTCTTGAGCAGCCCCTaGATGACCTCACTGACGGTG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARAFLSSP*MTSLTV
Trigger: CACCGTCAGTGAGGTCATCCAGGGGCTGCTCAAGAA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIGGGQQ*RVSGRA
Trigger: TGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCC...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNGGGQQ*RVSGRA
Trigger: TGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCC...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAATACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAAQCRV*PMLQNR
Trigger: TCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGC...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREPLFTS*QEKPAA
Trigger: TGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGG...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILSMDSA*VREGTS
Trigger: AGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACT...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFASMDSA*VREGTS
Trigger: AGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACT...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGGQHSF*DQGQYG
Trigger: TCCATACTGCCCCTGATCCCAGAAGGAATGCTGACC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTAGGCTGAGCATGAGATaGCTAACCAGGGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSRLSMR*LTRVFV
Trigger: CACAAAAACCCTGGTTAGCCATCTCATGCTCAGCCT...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGTTACTCCCACCTCTaGGAGGGAACGGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGISYSHL*EGTGTR
Trigger: TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCGCACAGATCAGGAAATaGGAGCCTAGGGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLAQIRK*EPRVWF
Trigger: AAACCACACCCTAGGCTCCCATTTCCTGATCTGTGC...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTTGGCCGGGGACGCCATaGCCATGCCCGGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLWPGTP*PCPASG
Trigger: GCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCA...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS-3UTR CCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCGGTTTACAGACATTCTaGCTGAAGGTCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAGLQTF*LKVTVR
Trigger: CCTCACCGTGACCTTCAGCCAGAATGTCTGTAAACC...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCTTCTCAGGCCATGGGTaGCACCGGCCTGGTTTTACT +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIFSGHG*HRPGFT
Trigger: AGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAA...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGAGACCTTCCCCTGTTaGTCATTCTCAGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWETFPC*SFSGHG
Trigger: CCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp AACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTGGGCAGGCACAAATGC +
Preference number: 4 (lower is better)
Translates to: NPRANTCPWKRL*PQLELLGRHKC
Trigger: GCATTTGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGTTTACAGACATTCTTTaGAAGATGTTTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEFTDIL*KMFALR
Trigger: GCGCAGAGCAAACATCTTTCAAAGAATGTCTGTAAA...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR TCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTGTCGATCTTCTGCTTaGTCTCCTGCAGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCCRSSA*SPAVWA
Trigger: CGCCCACACTGCAGGAGATCAAGCAGAAGATCGACA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCTTTGCCGGCTGGTGTaGGGTTCCAGTTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQILCRLV*GSSLVT
Trigger: CGTCACCAAACTGGAACCTCACACCAGCCGGCAAAG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPVVWYH*LESKLR
Trigger: CCTGAGTTTTGACTCCAATCAGTGATACCAGACCAC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGACAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRQRGNF*SYTNKL
Trigger: AAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTG...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCAGCTTGTGTTGCCTTTaGAGCTCTGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFASLCCL*SSGDYA
Trigger: TGCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCT...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGCTTGTGTTGCCTTTaGAGCTCTGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLSLCCL*SSGDYA
Trigger: TGCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAGCTTGTGTTGCCTTTaGAGCTCTGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILSLCCL*SSGDYA
Trigger: TGCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCT...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCCTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARALRHSG*QVNLQL
Trigger: TAACTGTAAATTCACCTGTCACCCAGAATGCCGCAG...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCTCGCTATGGATAAGTaGGAAACCTCAAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLLAMDK*ETSSPH
Trigger: GTGTGGACTTGAGGTTTCTCACTTATCCATAGCGAG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTAAAGGACTTGGCCTCTaGTGGCAGAAGGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGKGLGL*WQKAIW
Trigger: CCAAATTGCCTTCTGCCATCAGAGGCCAAGTCCTTT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCTCCCGCGCCTTTCCTaGCCCTCGCGTAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGLPRLS*PSRKAV
Trigger: AACTGCTTTACGCGAGGGGCAGGAAAGGCGCGGGAG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTTTTCTTTCAGCGGGGTaGGAGCGCTCGGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPFLSAG*ERSGGP
Trigger: CGGGCCGCCCGAGCGCTCGCACCCCGCTGAAAGAAA...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTTCTGCTTGATCTCCTaGAGTGTGGGCGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIFCLIS*SVGGRC
Trigger: ACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQETNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEESKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGCACTGGAGTGTCTCTaGAGTCCTGGCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGALECL*SPGYLL
Trigger: CAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTTTCTGGAAGAGCACTaGAAACCAAGAGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAFLEEH*KPREGA
Trigger: AGCACCCTCTCTTGGTTTGCAGTGCTCTTCCAGAAA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGAGCAAAAACAGCCTGTaGCTGAGCACAGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRSKNSL*LSTGSF
Trigger: GAAACTCCCTGTGCTCAGGCACAGGCTGTTTTTGCT...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGAGCACAAGCCCTGTaGGGCCAACAATTGAGACTC +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIRAQAL*GQQLRL
Trigger: GAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCAGAGCACAAGCCCTGTaGGGCCAACAATTGAGACTC +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGRAQAL*GQQLRL
Trigger: GAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGACAAAAGTGCAAACTTCTaGGGATTGTCCACAACCATG +
Preference number: 4 (lower is better)
Translates to: QPPNMQTLRKQVEEWNVDKSANF*GLSTTM
Trigger: CATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTT...GTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGGCAATGGAGAGTTTCTaGAAGAGCACTTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLAMESF*KSTCPS
Trigger: GGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGC...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLRLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTAGTGCTGGAGGCCGATaGGGAACCCAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCSAGGR*GTQVAQ
Trigger: CTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACT...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTCCTTGGGCAGCACCTaGAGATCCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQISLGST*RSQSRS
Trigger: ACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACATCAAGGCAACTCCTTaGGCAGCACCTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYIKATP*AAPGDP
Trigger: GGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGAT...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGGCGCAGTGCCGGGTCTaGCCCATGCTTCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWAQCRV*PMLQNR
Trigger: TCTGTTTTGAAGCATGGGCCAGACCCGGCACTGCGC...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCTCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLSSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACTCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNSSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTCTCAGAGGCTGGGTTaGAAAACCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGSQRLG*KTSPAL
Trigger: CAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTGGTTTCTCAGAGGCTaGGTTGGAAAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGWFLRG*VGKPAL
Trigger: CAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCAGGAAGGGAACGGTCTaGTTGGGTTCACTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITRKGTV*LGSLFL
Trigger: GAGAAAGAGTGAACCCAACCAGACCGTTCCCTTCCT...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATTGGAAATGCAGAGGTaGGGTACGTACAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPLEMQR*GTYNWK
Trigger: CTTCCAGTTGTACGTACCCCACCTCTGCATTTCCAA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACA +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITQAAAF*VTGEFT
Trigger: TGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTG...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCAATAAAGAAAGCAGATaGGAGCAGAGCGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGNKESR*EQSGPC
Trigger: GCAAGGGCCGCTCTGCTCCCATCTGCTTTCTTTATT...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCCCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGIVRKF*SSGMEK
Trigger: CTTCTCCATCCCTGAACTTCAGAACTTCCTAACAAT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWIVRKF*SSGMEK
Trigger: CTTCTCCATCCCTGAACTTCAGAACTTCCTAACAAT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATGGGAGGGAGGTCTGTaGCCCTCAACCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREWEGGL*PSTHTE
Trigger: TTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGVVWYH*LESKLR
Trigger: CCTGAGTTTTGACTCCAATCAGTGATACCAGACCAC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGKPALL*KLQVLL
Trigger: GAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFKPALL*KLQVLL
Trigger: GAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACCCACTGAACACAGTGTaGCAAACACTGAGACCTTCC +
Preference number: 4 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNPLNTV*QTLRPS
Trigger: GGAAGGTCTCAGTGTTTGTCACACTGTGTTCAGTGG...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACGCCGGAGTTTCAGATaGACTTTGATGAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGRRSFR*TLMKPV
Trigger: CACGGGTTTCATCAAAGTGCATCTGAAACTCCGGCG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWLLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQESKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SKLRHPDGREVCDPQPILGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTGCTCTCCGAGCGCAGTaGCGGGTCTGGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLALRAQ*RVWPML
Trigger: AAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGC...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTGCTCTCCGAGCGCAGTaGCGGGTCTGGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPALRAQ*RVWPML
Trigger: AAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGC...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCTCTCAGCCTGTTATCTaGTGGGAAATTGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARASQPVI*WEIGVS
Trigger: AGATACCCCAATTTCCCAGCAGATAACAGGCTGAGA...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCCCAGCCTCCCAACATaGAGACCCTCAGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGPSLPT*RPSESR
Trigger: CCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGGG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACTCTGCAGGATCTGGTaGTTTTTGGAGACCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGRELCRIW*FLETER
Trigger: CCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWGGGQQ*RVSGRA
Trigger: TGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCC...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGRLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTGAACGCGGGCTCTCCTaGCCTTGTCTCCCACACCGC +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLERGLS*PCLPHR
Trigger: GCGGTGTGGGAGACAAGGCCAGGAGAGCCCGCGTTC...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRSSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGTGTCTCTGCAGTCCTaGCTACTTGTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFVSLQS*LLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACAC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGTGTCTCTGCAGTCCTaGCTACTTGTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGVSLQS*LLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACAC...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTGGTTTCTCAGAGGCTaGGTTGGAAAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAWFLRG*VGKPAL
Trigger: CAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGATTGCCTTTGAAGCTCTaGAGACTATGCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGLPLKL*RLCTVH
Trigger: ATGAACTGTGCATAGTCTCCAGAGCTTCAAAGGCAA...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGAGGCTGAGCATGAGATaGCTAACCAGGGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRRLSMR*LTRVFV
Trigger: CACAAAAACCCTGGTTAGCCATCTCATGCTCAGCCT...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTAGTGGGTGGGCTTaGACACAGGTAGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLFSGWA*TQVGRE
Trigger: TTCCCTTCCTACCTGTGTCCAAGCCCACCCACTAAA...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGCAATGGAGAGTTTCTaGAAGAGCACTGCAAACCAA +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPAMESF*KSTANQ
Trigger: TTGGTTTGCAGTGCTCTTCCAGAAACTCTCCATTGC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGCACAGGGAGTTTCTTaGTCCCCCTCCTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVAQGVS*SPSSLS
Trigger: ACTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCAACGTCTATACCCAGTaGAGCCCAGAGATGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGNVYTQ*SPEMEL
Trigger: AAGCTCCATCTCTGGGCTCCACTGGGTATAGACGTT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTGGCAGAAGGCAATTTaGACTTCCATCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLWQKAI*TSIRLT
Trigger: GGTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCA...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp GGTTCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTaGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: GSSLVTREATIW*VKGLQIERGRQ
Trigger: CTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 72 bp GCTGACCCAAGAGCACAAGCCCTGTGCGGCCAACAATaGAGACTCCTAAGCTCTTTGAGCACAATAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ADPRAQALCGQQ*RLLSSLSTIEY
Trigger: GTACTCTATTGTGCTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp GTCTGGCCCATGCTTCAAAACAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAG +
Preference number: 4 (lower is better)
Translates to: VWPMLQNRKDSK*AELEAPLSVIK
Trigger: CTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCATGGGCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTGTCGATCTTCTGCTTaGTCTCCTGCAGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESCRSSA*SPAVWA
Trigger: CGCCCACACTGCAGGAGATCAAGCAGAAGATCGACA...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTGGGGGCGGGCACAGCTaGACCCTCGTGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPGGGHS*TLVQTL
Trigger: AAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCC...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGATTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATTTTTAAATGGTCAATaGCTGGCTTCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPFLNGQ*LASLWG
Trigger: TCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWVVWYH*LESKLR
Trigger: CCTGAGTTTTGACTCCAATCAGTGATACCAGACCAC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCCAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIQRGNF*SYTNKL
Trigger: AAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTG...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAAGCTTGTGTTGCCTTTaGAGCTCTGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGSLCCL*SSGDYA
Trigger: TGCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCT...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTTA +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLLRHSG*QVNLQL
Trigger: TAACTGTAAATTCACCTGTCACCCAGAATGCCGCAG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGATAAACCCTCCTGCTaGCTGCAGTCCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRDKPSC*LQSNWI
Trigger: GATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR TCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAAGATAAACCCTCCTGCTaGCTGCAGTCCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREDKPSC*LQSNWI
Trigger: GATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATC...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR TCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTGGCAAAAGAAAATCTaGCTCCACCAGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGWQKKI*LHQEAC
Trigger: ACATGCTTCCTGGTGGAGTCAGATTTTCTTTTGCCA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAATGCTGGCATCTCATaGCCAAGAGTTGCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGINAGIS*PRVASL
Trigger: TAGACTGGCAACTCTTGGTCATGAGATGCCAGCATT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCTGCTGATGTGCAGCTaGTTGATGGCATCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGLLMCS*LMASRG
Trigger: GCCCCTAGATGCCATCAAGCAGCTGCACATCAGCAG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARATNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGCACTGGAGTGTCTCTaGAGTCCTGGCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERALECL*SPGYLL
Trigger: CAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGC...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAAGCTCTGGAGACTATaGACAGTTCATACGACGAGG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARAKLWRL*TVHTTR
Trigger: CCTCGTCGTATGAACTGTGCATAGTCTCCAGAGCTT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAAGCTCTGGAGACTATaGACAGTTCATACGACGAGG +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGIKLWRL*TVHTTR
Trigger: CCTCGTCGTATGAACTGTGCATAGTCTCCAGAGCTT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFALQQEP*LLLMLE
Trigger: CTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTCAGCTGGACCCCTGGTaGTCAGGAGAAGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPQLDPW*SGEAHS
Trigger: GCTGTGGGCTTCTCCTGAGCACCAGGGGTCCAGCTG...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTGGGTGTCTGCTCAGAGTGGGACTCTGGGATCCTaGGGCTGCTCGAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: HDSNEQGNNLLSWVSAQSGTLGS*GCSKML
Trigger: GAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCC...ACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACAATCACAGAGCTCATTaGAGCAGAACTGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHNHRAH*SRTGTR
Trigger: TCTAGTTCCAGTTCTGCTGCAATGAGCTCTGTGATT...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCTCATGACCAAGAGTTaGCAGTCTATGAACCATGTT +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYLMTKS*QSMNHV
Trigger: AACATGGTTCATAGACTGGCAACTCTTGGTCATGAG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCAAAAGTGCAAACTTCTaGGGATTGTCCACAACCATG +
Preference number: 4 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLKSANF*GLSTTM
Trigger: CATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTT...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCGCAATGGAGAGTTTCTaGAAGAGCACTTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCAMESF*KSTCPS
Trigger: GGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGC...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTACCCAGGTTTGCCCTaGGATTCTCTTAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWYPGLP*DSLKAS
Trigger: GGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCACAGCTGGAACTGCTaGGCAGGCACAAATGCACCT +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLHSWNC*AGTNAP
Trigger: AGGTGCATTTGTGCCTGCCCAGCAGTTCCAGCTGTG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGTGGTGGGGCACAGCCTaGGGGCGGGCACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWWWGTA*GRAQLN
Trigger: GTTCAGCTGTGCCCGCCCCCAGGCTGTGCCCCACCA...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTCCTTCCTTTGCCGGCTaGTGTGAGGTTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESPSFAG*CEVPVW
Trigger: CCAAACTGGAACCTCACACCAGCCGGCAAAGGAAGG...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLRLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARARLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTGGGTGTCTGCTCAGAGTAGTGCTGGAGGCCGATaGGGAACCCAAGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HDSNEQGNNLLSWVSAQSSAGGR*GTQVAQ
Trigger: CTGGGCTACTTGGGTTCCCCATCGGCCTCCAGCACT...ACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGTCCTTGGGCAGCACCTaGAGATCCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKSLGST*RSQSRS
Trigger: ACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGA...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWPLFTS*QEKPAA
Trigger: TGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCTCTGGTATCACTGATTaGAGTCAAAACTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITSGITD*SQNSGT
Trigger: GGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGA...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTCTCAGAGGCTGGGTTaGAAAACCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWSQRLG*KTSPAL
Trigger: CAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTCTCAGAGGCTGGGTTaGAAAACCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQISQRLG*KTSPAL
Trigger: CAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTGGTTTCTCAGAGGCTaGGTTGGAAAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWWFLRG*VGKPAL
Trigger: CAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCAGGGAACGGTCTGGTTaGGTTCACTCTTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCRERSG*VHSFSY
Trigger: GTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACA +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAQAAAF*VTGEFT
Trigger: TGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTG...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCTGGTTAGCTCCCCTTaGGGGATGGAGGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWLVSSP*GMEVKK
Trigger: TTTCTTGACCTCCATCCCCCAAGGGGAGCTAACCAG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATGGGTGGCACCGGCCTaGTTTTACTCCAGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREWVAPA*FYSSLC
Trigger: GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTGGCAGAAGGCAATTTaGACTTCCATCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAWQKAI*TSIRLT
Trigger: GGTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCCCTCAGAAAGCAGGTaGAGGAGTGGAACGTGGACT +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVPSESR*RSGTWT
Trigger: AGTCCACGTTCCACTCCTCCACCTGCTTTCTGAGGG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: KLRHPDGREVCDPQPILNLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTTTTTTAAATGGTCAATaGCTGGCTTCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGFLNGQ*LASLWG
Trigger: TCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAA...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARACKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWCKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCAAACACTTACACACTaGGCAACACAACCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQQTLTH*ATQPKK
Trigger: CTTCTTTGGTTGTGTTGCTCAGTGTGTAAGTGTTTG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGCAAACACTTACACACTaGGCAACACAACCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLQTLTH*ATQPKK
Trigger: CTTCTTTGGTTGTGTTGCTCAGTGTGTAAGTGTTTG...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTGGGTGTCTGCTCAGAGTGAAGTTGACACGACCTaGGAGACCCTGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HDSNEQGNNLLSWVSAQSEVDTT*ETLLPS
Trigger: GGAAGGCAGCAGGGTCTCTCAGGTCGTGTCAACTTC...ACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACGCCGGAGTTTCAGATaGACTTTGATGAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGRERRSFR*TLMKPV
Trigger: CACGGGTTTCATCAAAGTGCATCTGAAACTCCGGCG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTCCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: AGTAEPSCKHLSMEETFASKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: LEISEPASALVLLTLSIWPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGCACTGGAGTGTCTCTaGAGTCCTGGCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESALECL*SPGYLL
Trigger: CAACAAGTAGCCAGGACTGCAGAGACACTCCAGTGC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGLQQEP*LLLMLE
Trigger: CTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAAATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGREMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARAREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: ATQPKKALPAVTPTSGREADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TQIYAFGFPCAMWARARARRLFK*SMTGFP
Trigger: AGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCT...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSARLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTCTGGTATCACTGATTaGAGTCAAAACTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGSGITD*SQNSGT
Trigger: GGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCTCTGGTATCACTGATTaGAGTCAAAACTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGISGITD*SQNSGT
Trigger: GGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGA...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGTGTCTCTGCAGTCCTaGCTACTTGTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITVSLQS*LLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACAC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTGGTTTCTCAGAGGCTaGGTTGGAAAACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVWFLRG*VGKPAL
Trigger: CAGGGCTGGTTTTCCAACCCAGCCTCTGAGAAACCA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRSMDSA*VREGTS
Trigger: AGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACT...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTTGCCTTTGAAGCTCTaGAGACTATGCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGLPLKL*RLCTVH
Trigger: ATGAACTGTGCATAGTCTCCAGAGCTTCAAAGGCAA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACA +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERQAAAF*VTGEFT
Trigger: TGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGAATAAAGAAAGCAGATaGGAGCAGAGCGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWNKESR*EQSGPC
Trigger: GCAAGGGCCGCTCTGCTCCCATCTGCTTTCTTTATT...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp GTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VTREATIWLVKG*QIERGRQLFVS
Trigger: TGAAACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
3UTR CAA 72 bp ATGCTTCAAAACAGAAAGGACTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTAATCAAGGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: MLQNRKDSKLAE*EAPLSVIKATP
Trigger: AGGAGTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCTGTTTTGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCCAGGTTCACCTCCTTaGTGGCATCATAGATGGACT +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCPGSPP*WHHRWT
Trigger: AGTCCATCTATGATGCCATCAAGGAGGTGAACCTGG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: PKSTSPVRPTIETPKLFELLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: RANTCPWKRLLPQLELLGLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIVVWYH*LESKLR
Trigger: CCTGAGTTTTGACTCCAATCAGTGATACCAGACCAC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACAGAGAGGGAACTTCTaGAGCTACACGAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERQRGNF*SYTNKL
Trigger: AAGCTTGTTCGTGTAGCTTCAGAAGTTCCCTCTCTG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAAACACTTACACACTaGGCAACACAACCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGQTLTH*ATQPKK
Trigger: CTTCTTTGGTTGTGTTGCTCAGTGTGTAAGTGTTTG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGTGTCCGTAAGATGGTaGAGTTCAAGGGAGACGTTT +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRVSVRW*SSRETF
Trigger: AAACGTCTCCCTTGAACTTCACCATCTTACGGACAC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTGGCAAAAGAAAATCTaGCTCCACCAGGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCWQKKI*LHQEAC
Trigger: ACATGCTTCCTGGTGGAGTCAGATTTTCTTTTGCCA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTAGACAGGTTAGAAGTTaGCACGACCTGAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCRQVRS*HDLRDP
Trigger: AGGGTCTCTCAGGTCGTGTCAACTTCTAACCTGTCT...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACGAAAGATGTTTGCTCTaGGCATTTCTGAAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYERCLL*AFLKKV
Trigger: TACCTTTTTCAGAAATGCGCAGAGCAAACATCTTTC...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR GCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCGCCGGAGTTTCAGATaGACTTTGATGAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCRRSFR*TLMKPV
Trigger: CACGGGTTTCATCAAAGTGCATCTGAAACTCCGGCG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCGCCGGAGTTTCAGATaGACTTTGATGAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVRRSFR*TLMKPV
Trigger: CACGGGTTTCATCAAAGTGCATCTGAAACTCCGGCG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCACAAATAAATCTGAATaGACCAGGAGGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGTNKSE*TRRRGS
Trigger: GCTTCCTCTCCTCCTGGTGCATTCAGATTTATTTGT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCATGGAAGAGACTTTTaGCACAGCTGGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGHGRDF*HSWNCW
Trigger: CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLTYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARATYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCATTAATGTTAGAGACATaGAGGACGAAGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPLMLET*RTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAA...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCCTAAGGCCTGGGTTTaGACAATGGGTCCAGACCTA +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKPKAWV*TMGPDL
Trigger: TAGGTCTGGACCCATTGTGCAAACCCAGGCCTTAGG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGTTTTACTCCAGTTTATaGCACAAGACTACACACTGG +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQFYSSL*HKTTHW
Trigger: CCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAA...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTCTCAGCCTGTTATCTaGTGGGAAATTGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCSQPVI*WEIGVS
Trigger: AGATACCCCAATTTCCCAGCAGATAACAGGCTGAGA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTGCAATGGAGAGTTTCTaGAAGAGCACTTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCAMESF*KSTCPS
Trigger: GGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGC...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGGCAATGGAGAGTTTCTaGAAGAGCACTTGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLAMESF*KSTCPS
Trigger: GGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGC...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCATGAGTTCTGATCCTTaGCAGAATCTGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGMSSDP*QNLWWG
Trigger: GCCCCACCACAGATTCTGCCAAGGATCAGAACTCAT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGAACAACAGGCACCTTaGGGCCGCGGGAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKEQQAP*GRGNSP
Trigger: AGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGRESSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGTGTCTCTGCAGTCCTaGCTACTTGTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWVSLQS*LLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACAC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGTGTCTCTGCAGTCCTaGCTACTTGTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGVSLQS*LLVGIF
Trigger: AAAAATTCCAACAAGTAGCCAGGACTGCAGAGACAC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKGQHSF*DQGQYG
Trigger: TCCATACTGCCCCTGATCCCAGAAGGAATGCTGACC...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCAGGCTGAGCATGAGATaGCTAACCAGGGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIRLSMR*LTRVFV
Trigger: CACAAAAACCCTGGTTAGCCATCTCATGCTCAGCCT...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAGGAGTTTTAGTGGGTaGGCTTGGACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVRSFSG*AWTQVG
Trigger: TCCTACCTGTGTCCAAGCCCACCCACTAAAACTCCT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGGGTTTACAGACATTCTaGCTGAAGGTCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLGLQTF*LKVTVR
Trigger: CCTCACCGTGACCTTCAGCCAGAATGTCTGTAAACC...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGAAAAGGGAGGACAAATaGCTCAAAAACGTCTATACC +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQKREDK*LKNVYT
Trigger: GGTATAGACGTTTTTGAGCCATTTGTCCTCCCTTTT...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGTTTCACATGAGTTCTaGTCCTTGGCAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRVSHEF*SLAESV
Trigger: CACAGATTCTGCCAAGGATCAGAACTCATGTGAAAC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: HTYADICLWVSMCNVGQGTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGTGGTCTGGTATCACTaGTTGGAGTCAAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVVVWYH*LESKLR
Trigger: CCTGAGTTTTGACTCCAATCAGTGATACCAGACCAC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWCKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTAGCTTGTGTTGCCTTTaGAGCTCTGGAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCSLCCL*SSGDYA
Trigger: TGCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCT...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTGGGTGTCTGCTCAGAGTAAAACAGCCTGTGCCTaGGCACAGGGAGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HDSNEQGNNLLSWVSAQSKTACA*AQGVSW
Trigger: CCAAGAAACTCCCTGTGCTCAGGCACAGGCTGTTTT...ACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCTTCACTCAGTTTCATaGCCAGGCAGTTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLHSVS*PGSSSL
Trigger: GAGAGAAGAACTGCCTGGGCATGAAACTGAGTGAAG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCGCCGGAGTTTCAGATaGACTTTGATGAAACCCGTG +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKRRSFR*TLMKPV
Trigger: CACGGGTTTCATCAAAGTGCATCTGAAACTCCGGCG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGATATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: THTQIYAFGFPCAMWARASKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTACATACGCAGATATATaGCTTTGGGTTTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSATYADI*LWVSMC
Trigger: GCACATGGAAACCCAAAGGCATATATCTGCGTATGT...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: EATIWLVKGLQIERGRQLLENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCLQQEP*LLLMLE
Trigger: CTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTTTTACTCCAGTTTATaGCACAAGACTACACACTGG +
Preference number: 4 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNFYSSL*HKTTHW
Trigger: CCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAA...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCAAAAGTGCAAACTTCTaGGGATTGTCCACAACCATG +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCKSANF*GLSTTM
Trigger: CATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTAAAAGTGCAAACTTCTaGGGATTGTCCACAACCATG +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAKSANF*GLSTTM
Trigger: CATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTT...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGATTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AEPSCKHLSMEETFATAGFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTGACTTTTGCCACAGCTaGAACTGCTGGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPDFCHS*NCWAGT
Trigger: TGTGCCTGCCCAGCAGTTCCAGCTGTGGCAAAAGTC...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAAGAGAGGCAACTATTTaGTTGGTGAAAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERREATI*LVKGLQ
Trigger: CTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCT...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGAGGCTGAAGACAGCTTaGACACCTTTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLRLKTA*TPFSAL
Trigger: CAATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCT...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGATCTGGTATCACTGATTaGAGTCAAAACTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERSGITD*SQNSGT
Trigger: GGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGA...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTCCTCCCTGTCAATGTaGTCTGGTATCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVSSLSM*SGITDW
Trigger: CCAATCAGTGATACCAGACCACATTGACAGGGAGGA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGAGTATGGACTCAGCCTaGGTCAGAGAGGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKSMDSA*VREGTS
Trigger: AGAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAGGCTGAGCATGAGATaGCTAACCAGGGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVRLSMR*LTRVFV
Trigger: CACAAAAACCCTGGTTAGCCATCTCATGCTCAGCCT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTAGGCTGAGCATGAGATaGCTAACCAGGGTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESRLSMR*LTRVFV
Trigger: CACAAAAACCCTGGTTAGCCATCTCATGCTCAGCCT...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGGGTTTACAGACATTCTaGCTGAAGGTCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKGLQTF*LKVTVR
Trigger: CCTCACCGTGACCTTCAGCCAGAATGTCTGTAAACC...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000581503.6
ENST00000636182.1
CDS-3UTR CCA 90 bp CATGACAGTAATGAACAGGGCAATAACCTTTTATCTTGGGTGTCTGCTCAGAGTCCTGGGTTTGCACAATaGGTCCAGACCTACCTCTAC +
Preference number: 4 (lower is better)
Translates to: HDSNEQGNNLLSWVSAQSPGFAQ*VQTYLY
Trigger: GTAGAGGTAGGTCTGGACCCATTGTGCAAACCCAGG...ACTCTGAGCAGACACCCAAGATAAAAGGTTATTGCCCTGTTCATTACTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGAACGTCTATACCCAGTaGAGCCCAGAGATGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKNVYTQ*SPEMEL
Trigger: AAGCTCCATCTCTGGGCTCCACTGGGTATAGACGTT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGCCTTTAGCACAAAGCTaGGGACCTCCGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWPLAQS*GPPCQA
Trigger: GGCCTGACACGGAGGTCCTCAGCTTTGTGCTAAAGG...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGGGAACAGTCCTTTTATaGGCATTACCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLGTVLL*ALPCFQ
Trigger: CTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCC...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGATTTTTAAATGGTCAATaGCTGGCTTCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRFLNGQ*LASLWG
Trigger: TCCCCAAAGGGAAGCCAGTCATTGACCATTTAAAAA...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESCKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCACAAGACTACACACTGGTTTCAGAGTTTAAAGCATaGTTCCATTCACATCATCTC +
Preference number: 4 (lower is better)
Translates to: GGTGLVLLQFMPQDYTLVSEFKA*FHSHHL
Trigger: GAGATGATGTGAATGGAATCATGCTTTAAACTCTGA...AACCAGTGTGTAGTCTTGTGGCATAAACTGGAGTAAAACCAGGCCGGTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR TCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTCCACCAGGAAGCATGTaGTCATGTCCATTCTCACCC +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLPPGSM*SCPFSP
Trigger: GGGTGAGAATGGACATGATCACATGCTTCCTGGTGG...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSAYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGRELQQEP*LLLMLE
Trigger: CTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGAGGCTGCAGCTTCTCTaGAGATCTCTGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKRLQLL*RSLSQP
Trigger: AGGCTGGCTCAGAGATCTCCAGAGAAGCTGCAGCCT...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGGCAGATATATGCCTTTaGGTTTCCATGTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWADICL*VSMCNV
Trigger: CACATTGCACATGGAAACCCAAAGGCATATATCTGC...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTCTGGTATCACTGATTaGAGTCAAAACTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVSGITD*SQNSGT
Trigger: GGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTGGTCAGCATTCCTTCTaGGATCAGGGGCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLGQHSF*DQGQYG
Trigger: TCCATACTGCCCCTGATCCCAGAAGGAATGCTGACC...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR CCA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACTTCAGCTACTGTCCATaGAGTACTTTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNFSYCP*STFSKH
Trigger: ATGTTTGGAAAAAGTACTCCATGGACAGTAGCTGAA...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCIVRKF*SSGMEK
Trigger: CTTCTCCATCCCTGAACTTCAGAACTTCCTAACAAT...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTTCTCTGGAGATCTCTaGGCCAGCCTCAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKFSGDL*ASLSFG
Trigger: ACCAAAGCTGAGGCTGGCTCAGAGATCTCCAGAGAA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTAAACCAGCCCTGCTTTaGAAATTACAAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESKPALL*KLQVLL
Trigger: GAGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTT...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGAGACGTTTCTAACATaGGTCATTTTTGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVETFLT*VIFATG
Trigger: GCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTACTCTAGGCCTCCACTaGACACAGTGTGACAAACAC +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPTLGLH*TQCDKH
Trigger: GTGTTTGTCACACTGTGTTCAGTGGAGGCCTAGAGT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTAGACAGGTTAGAAGTTaGCACGACCTGAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPRQVRS*HDLRDP
Trigger: AGGGTCTCTCAGGTCGTGTCAACTTCTAACCTGTCT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGATATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGATCAAAGAGGAATCAATaGCAGAGAAAGAACACACAG +
Preference number: 4 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERSKRNQ*QRKNTQ
Trigger: CTGTGTGTTCTTTCTCTGGCATTGATTCCTCTTTGA...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: LHLLPLIYSRERVSKGRELENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQILENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTTTAATGTTAGAGACATaGAGGACGAAGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: RGNYLVGERLADRERTSALMLET*RTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAA...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCTCATGACCAAGAGTTaGCAGTCTATGAACCATGTT +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCLMTKS*QSMNHV
Trigger: AACATGGTTCATAGACTGGCAACTCTTGGTCATGAG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCAACAAAATTCCAAATaGTGGCATCTCATGACCAAG +
Preference number: 4 (lower is better)
Translates to: SSLVTREATIWLVKGLQIQQNSK*WHLMTK
Trigger: CTTGGTCATGAGATGCCAGCATTTGGAATTTTGTTG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCAAAAGTGCAAACTTCTaGGGATTGTCCACAACCATG +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGKSANF*GLSTTM
Trigger: CATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRRRLFK*SMTGFP
Trigger: AGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCT...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWRRLFK*SMTGFP
Trigger: AGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCT...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAGGATAGCAAAGAAATaGTTTCTCAGAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVRIAKK*FLRGWV
Trigger: AACCCAGCCTCTGAGAAACCATTTCTTTGCTATCCT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCTTGCCTTTGAAGCTCTaGAGACTATGCACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVLPLKL*RLCTVH
Trigger: ATGAACTGTGCATAGTCTCCAGAGCTTCAAAGGCAA...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGCAAAATTCCAAATGCTaGCATCTCATGACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWQNSKC*HLMTKS
Trigger: ACTCTTGGTCATGAGATGCCAGCATTTGGAATTTTG...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
3UTR CAA 72 bp CTTGTTGGATTTTGTCCTGCTCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTTCAGGGATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LVGFCPAPLFPG*LGSSEVQGWRR
Trigger: CCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGACAAAATCCAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR TCA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCYPLKK*KLLGIV
Trigger: GACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATA...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGCCGGTTACCCAGGTTTaGCCTGGGATTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWPVTQV*PGILLR
Trigger: CCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGGCCGGGTCTGGCCCATaGTTCAAAACAGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWAGSGP*FKTERT
Trigger: AGTCCTTTCTGTTTTGAAGCATGGGCCAGACCCGGC...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGLENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGAGCAAAAACAGCCTGTaGCTGAGCACAGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKSKNSL*LSTGSF
Trigger: GAAACTCCCTGTGCTCAGGCACAGGCTGTTTTTGCT...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGAATCACAGAGCTCATTaGAGCAGAACTGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: SRASGKLALLLFLSENKKNHRAH*SRTGTR
Trigger: TCTAGTTCCAGTTCTGCTGCAATGAGCTCTGTGATT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCTTTTGCACTTGTTaGATTTTGTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NYLVGERLADRERTSAVCFFCTC*ILSCSS
Trigger: AGAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAA...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCAGGAGACTTTTTAAATaGTCAATGACTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KYHTYADICLWVSMCNVGRRLFK*SMTGFP
Trigger: AGGGAAGCCAGTCATTGACCATTTAAAAAGTCTCCT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGCCATTGTTCACTTCCTaGCAGGAGAAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWPLFTS*QEKPAA
Trigger: TGCTGCTGGCTTCTCCTGCCAGGAAGTGAACAATGG...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGTCTCAGAGGCTGGGTTaGAAAACCAGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWSQRLG*KTSPAL
Trigger: CAAAGCAGGGCTGGTTTTCCAACCCAGCCTCTGAGA...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CCA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGTTCAGCTACTGTCCATaGAGTACTTTTTCCAAACAT +
Preference number: 4 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWFSYCP*STFSKH
Trigger: ATGTTTGGAAAAAGTACTCCATGGACAGTAGCTGAA...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CCA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTCAAAATTCCAAATGCTaGCATCTCATGACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: TKENDSPPAPFNIQQGESQNSKC*HLMTKS
Trigger: ACTCTTGGTCATGAGATGCCAGCATTTGGAATTTTG...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR GCA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGATTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QFGDERGNYLVGERLADRLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGCTGTTTGTTTCACATaGGTTCTGATCCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKAVCFT*VLILGR
Trigger: TCTGCCAAGGATCAGAACTCATGTGAAACAAACAGC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGCCTCCTCCAGTTTCTaGCTAAACTTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKASSSF*LNLSYF
Trigger: GAAGTATGACAAGTTTAGGCAGAAACTGGAGGAGGC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGACAGCTGAACCCTCGTaGAAACACTTGTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWTAEPS*KHLSME
Trigger: TTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGT...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGGCTTAGCTCAGACCTaGAAAAGGAATGTGCTACAA +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKGLAQT*KRNVLQ
Trigger: TTGTAGCACATTCCTTTTGCAGGTCTGAGCTAAGCC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTTTGCAGCAGGAGCCATaGCTTCTATTAATGTTAGAG +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLLQQEP*LLLMLE
Trigger: CTCTAACATTAATAGAAGGCATGGCTCCTGCTGCAA...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR TCA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTACTCCTATTTCTCTCTaGAAACAAAAAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RIQPKQEASANVSQEFDPTPISL*KQKGTE
Trigger: CTCAGTGCCTTTTTGTTTTCAGAGAGAAATAGGAGT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGTGTAAGTCAGGAATTTaGTCCTCCCTGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWCKSGI*SSLSMW
Trigger: CCACATTGACAGGGAGGATCAAATTCCTGACTTACA...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR TCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTTGTTGACAAAGATGTaGCTAAGTACCACACATACG +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKLLTKM*LSTTHT
Trigger: CGTATGTGTGGTACTTAGTCACATCTTTGTCAACAA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTCCTGCAAAAGGAATGTaGTACAACTTTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLPAKGM*YNFSLI
Trigger: TATGAGTGAAAAGTTGTAGCACATTCCTTTTGCAGG...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTTGGAAAACCAGCCCTaGTTTGAAAATTACAAGTCC +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKLENQP*FENYKS
Trigger: GGACTTGTAATTTTCAAAGCAGGGCTGGTTTTCCAA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTTAATGTTAGAGACATaGAGGACGAAGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKLMLET*RTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGTTAATGTTAGAGACATaGAGGACGAAGGAAAATGAC +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWLMLET*RTKEND
Trigger: GTCATTTTCCTTCGTCCTGCATGTCTCTAACATTAA...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR GCA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGTTGTCATACTTCTTTTaGACTTGTTGGATTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LAFSYCLISILSRRLFKWLSYFF*TCWILS
Trigger: GGACAAAATCCAACAAGTGCAAAAGAAGTATGACAA...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS GCA 90 bp CCCGGGCGCCCGGCTCGCGCCTCACTCCCTGACTCGTCCGGGCTCTaGGGTTTCGTGTCCCCGGCGCCAGCGCCCTCCCTCCGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: PGRPARASLPDSSGL*GFVSPAPAPSLRRR
Trigger: ACGGCGGCGGAGGGAGGGCGCTGGCGCCGGGGACACGAAACCGCAGAGCCCGGACGAGTCAGGGAGTGAGGCGCGAGCCGGGCGCCCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS GCA 90 bp TCGGGCGGCCCGGTAACCTGCTCCTGTCCCCGCGCCGCCTGCGCCTaGAGAGCCCCGGGCGCCCGGCTCGCGCCTCACTCCCTGACTCGT +
Preference number: 5 (lower is better)
Translates to: SGGPVTCSCPRAACA*RAPGARLAPHSLTR
Trigger: ACGAGTCAGGGAGTGAGGCGCGAGCCGGGCGCCCGGGGCTCTGCAGGCGCAGGCGGCGCGGGGACAGGAGCAGGTTACCGGGCCGCCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS GCA 90 bp CGCCTCGCTCCGCCGGGACTCTGGGATCCTGCGGCTGCTCGAAGATaGTCCGCACGTCGCGGGGTCGGGGCGCTCCAGGCCGCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: RLAPPGLWDPAAARR*SARRGVGALQAAAA
Trigger: TGCGGCGGCGGCCTGGAGCGCCCCGACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS GCA 90 bp GGACCAGGCAGAGCCGGCGGGCCGCCTGCGTTTCTTTCAGCGGGGTaGGAGCGCTCGGGCGGCCCGGTAACCTGCTCCTGTCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: GPGRAGGPPAFLSAG*ERSGGPVTCSCPRA
Trigger: GGCGCGGGGACAGGAGCAGGTTACCGGGCCGCCCGAGCGCTCGCACCCCGCTGAAAGAAACGCAGGCGGCCCGCCGGCTCTGCCTGGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS GCA 90 bp TCACACCAGCCGGGGCCGCCCGGCAGCACCAACTCGGCGAAGCAGTaGCCCTCGCCTCGCTCCGCCGGGACTCTGGGATCCTGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SHQPGPPGSTNSAKQ*PSPRSAGTLGSCGC
Trigger: GCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTTGGTGCTGCCGGGCGGCCCCGGCTGGTGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CCA 90 bp GCGGCGGCTCGGGGTCCAATAGTAGCGGGTACGGGCGCTGCCCGATaGCCGGGGACGCCATGGCCATGCCCGGCTAGTGGCGGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: AAARGPIVAGTGAAR*PGTPWPCPASGGSF
Trigger: AAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGTACCCGCTACTATTGGACCCCGAGCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS CCA 90 bp CCAACTCGGCGAAGCAGTGCCCCTCGCCTCGCTCCGCCGGGACTCTaGGATCCTGCGGCTGCTCGAAGATGCTCCGCACGTCGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: PTRRSSAPRLAPPGL*DPAAARRCSARRGV
Trigger: GACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CCA 90 bp CCAATAGTAGCGGGTACGGGCGCTGCCCGATGGCCGGGGACGCCATaGCCATGCCCGGCTAGTGGCGGCAGCTTTGGCAGCGGCGGCTTT +
Preference number: 5 (lower is better)
Translates to: PIVAGTGAARWPGTP*PCPASGGSFGSGGF
Trigger: AAAGCCGCCGCTGCCAAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGTACCCGCTACTATTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS GCA 90 bp CCAGACCCCGGAGGCCTCTGGAGGCCGGAGGAAAGGGAGGGGACCTaGCAGGGAGTAGCCACAGAATTCAGAGTGAGGGCAGAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PDPGGLWRPEEREGT*QGVATEFRVRAEAP
Trigger: TGGCGCCTCTGCCCTCACTCTGAATTCTGTGGCTACTCCCTGGCAGGTCCCCTCCCTTTCCTCCGGCCTCCAGAGGCCTCCGGGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS CCA 90 bp CCACTGAGGGCTCTGGCTATCAGCCTTCCAGACCCCGGAGGCCTCTaGAGGCCGGAGGAAAGGGAGGGGACCTGCCAGGGAGTAGCCACA +
Preference number: 5 (lower is better)
Translates to: PLRALAISLPDPGGL*RPEEREGTCQGVAT
Trigger: TGTGGCTACTCCCTGGCAGGTCCCCTCCCTTTCCTCCGGCCTCCAGAGGCCTCCGGGGTCTGGAAGGCTGATAGCCAGAGCCCTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS GCA 90 bp TCCCGAGCCCTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTGGTaGTTTTTGGAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SRALRAPLRNLCRIW*FLETERLFGSLQKS
Trigger: GCTCTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGCTCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS CCA 90 bp CCCTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTGGTGCTTTTTaGAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAGAGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: PSGPRCGTSAGSGAF*RPSGSSGACRRAAG
Trigger: TCCAGCGGCTCTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS CCA 90 bp CAGTCCCGAGCCCTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTaGTGCTTTTTGGAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QSRALRAPLRNLCRI*CFLETERLFGSLQK
Trigger: CTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGCTCGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGTTGGCAGCGGCGGCTTaGGCGACTGCGCTACTCCCG +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGLAAAA*ATALLP
Trigger: CGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCAA...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS-3UTR CAA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGGCCCTCCGGGCCCCGTaGCGGAACCTCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEALRAP*RNLCRI
Trigger: GATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGC...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS TCA 90 bp GAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAGAGCCGCTGGAGCTaGGCAGTGACTGTCCCAAAGCAGGCAGCGGTTGCCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ETERLFGSLQKSRWS*AVTVPKQAAVAFSS
Trigger: GGAGGAGAAGGCAACCGCTGCCTGCTTTGGGACAGTCACTGCTCAGCTCCAGCGGCTCTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGCGGGCTCTCCTGGCCTaGTCTCCCACACCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQERALLA*SPTPPP
Trigger: TGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCG...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS GCA 90 bp AGCAGTCTTCCAGTTCCTCGTCCAGGCTGCAGTACCCACTGCTCATaGTGCTGTCCACGGTCATCTACCCCGGAGTTCCCGGCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: SSLPVPRPGCSTHCS*CCPRSSTPEFPAEA
Trigger: GGCCTCGGCCGGGAACTCCGGGGTAGATGACCGTGGACAGCAGCATGAGCAGTGGGTACTGCAGCCTGGACGAGGAACTGGAAGACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR CAA 90 bp CAGGCCCACCGGCTCTCCGAGCGCAGTGCCGGGTCTGGCCCATGCTTCAAAACACGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: QAHRLSERSAGSGPCFKTRTSLG*NRPKRD
Trigger: GTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCG...TGTTTTGAAGCATGGGCCAGACCCGGCACTGCGCTCGGAGAGCCGGTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS GCA 90 bp GTGAATTTACAGTCCCGAGCCCTCCGGGCCCCGTTGCGGAACCTCTaGAGGATCTGGTGCTTTTTGGAGACCGAGCGGCTCTTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: VNLQSRALRAPLRNL*RIWCFLETERLFGS
Trigger: GCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGCTCGGGACTGTAAATTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCTTGGCAGCGGCGGCTTaGGCGACTGCGCTACTCCCG +
Preference number: 5 (lower is better)
Translates to: PVTQVCPGILLRPPPVSALAAAA*ATALLP
Trigger: CGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCAA...GGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580449.5
CDS CCA 90 bp ACCCTCCTGCTGACTGCAGTCCAACTGGATCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACAGTCCCGAGCCCTCCGGGCCCCGTT +
Preference number: 5 (lower is better)
Translates to: TLLLTAVQLDQAAAF*VTGEFTVPSPPGPV
Trigger: AACGGGGCCCGGAGGGCTCGGGACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGCTGTCGATCTTCTGCTaGATCTCCTGCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGLSIFC*ISCSVG
Trigger: GCCCACACTGCAGGAGATCAAGCAGAAGATCGACAG...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGCGGGCTCTCCTGGCCTaGTCTCCCACACCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLRALLA*SPTPPP
Trigger: TGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCG...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASRTSLG*NRPKRD
Trigger: GTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCAGCATTCACAGCGGTaGCAGCAGGAGCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASQHSQR*QQEPCL
Trigger: AAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCACTAGTGGCGGCAGCTTaGGCAGCGGCGGCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPLVAAA*AAAALA
Trigger: CGCCAAAGCCGCCGCTGCCAAAGCTGCCGCCACTAG...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCC +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGNQGNS*GSTWRS
Trigger: GGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCC +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGNQGNS*GSTWRS
Trigger: GGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCC +
Preference number: 5 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGNQGNS*GSTWRS
Trigger: GGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGSKLAE*EAPLSV
Trigger: TACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGA...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGRKDSK*AELEAP
Trigger: GGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEERPKRD*GRQRIA
Trigger: TGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCG...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCGCTTGCGGGAAAGGATaGGAAATGCAGAGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASACGKG*EMQRWG
Trigger: ACCCCACCTCTGCATTTCCAATCCTTTCCCGCAAGC...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGGGGCGGGGCCCAGGCTaGCGGGAAAGGATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LEISEPASALVLLTLSIWGRGPG*RERIGN
Trigger: ATTTCCAATCCTTTCCCGCAAGCCTGGGCCCCGCCC...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS GCA 90 bp GGAGCAGGGGCCAGGTTGAGGGTGGACGGGCGCTTACCAGTTTCATaGCCAGGCAGTTCTTCTCTCGCGTGTTGTAGCTGTCGATCTTCT +
Preference number: 5 (lower is better)
Translates to: GAGARLRVDGRLPVS*PGSSSLACCSCRSS
Trigger: AGAAGATCGACAGCTACAACACGCGAGAGAAGAACTGCCTGGGCATGAAACTGGTAAGCGCCCGTCCACCCTCAACCTGGCCCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS CCA 90 bp TGTCAGGCCCAGCAAGCAGGCGCAGGTAGAGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCACTTGTCCGTCCTTGTGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: CQAQQAGAGRGGGQQ*RVSGRALVRPCVSA
Trigger: AGCGGATACACAAGGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCCTCTACCTGCGCCTGCTTGCTGGGCCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS CCA 90 bp CCACAGCTCCCACCCAAGGCCGGCAGGAGTTTTAGTGGGTGGGCTTaGACACAGGTAGGAAGGGAACGGTCTGGTTGGGTTCACTCTTTC +
Preference number: 5 (lower is better)
Translates to: PQLPPKAGRSFSGWA*TQVGRERSGWVHSF
Trigger: GAAAGAGTGAACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCACCCACTAAAACTCCTGCCGGCCTTGGGTGGGAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS CCA 90 bp ACCCTCCTGCTGACTGCAGTCCAACTGGATCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACAGTTAGTGCAGCGCAGCGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: TLLLTAVQLDQAAAF*VTGEFTVSAAQRLP
Trigger: CGGCAGGCGCTGCGCTGCACTAACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS-3UTR CAA 90 bp AAGGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: KATPWAAPGDPRVAVGGGTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...CCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCAGGGACTCTGCTCTTGCCTCCCTGCCCGGATTCCACAGATCTGAACACCACAAGCACAGGGAGTTTCTaGGTCCCCCTCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SGTLLLPPCPDSTDLNTTSTGSF*VPLLPE
Trigger: CTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGCT...TGTGGTGTTCAGATCTGTGGAATCCGGGCAGGGAGGCAAGAGCAGAGTCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGATGGCAGAAGGCAATTaGGACTTCCATCAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGMAEGN*DFHQAD
Trigger: GTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCAT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAATGACTGGCTTCCCTTaGGGGAAACACATGACGATG +
Preference number: 5 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGMTGFP*GKHMTM
Trigger: CATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCAT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACGGGCTCTCCTGGCCTaGTCTCCCACACCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: QFGDERGNYLVGERLADRRALLA*SPTPPP
Trigger: TGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCG...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCCGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFRTSLG*NRPKRD
Trigger: GTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCG...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCGAGCTTGTGTTGCCTTaGAAGCTCTGGAGACTATGC +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGELVLP*KLWRLC
Trigger: GCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCTC...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTCAGCATTCACAGCGGTaGCAGCAGGAGCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSQHSQR*QQEPCL
Trigger: AAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTG...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGCAAAGCAGGCAGCGGTaGCCTTCTCCTCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQQSRQR*PSPPGP
Trigger: AGGGCCAGGAGGAGAAGGCAACCGCTGCCTGCTTTG...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp GGAGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGAGCACTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: GGRWGTQVAQALLCSLAGSTCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGTGCT...CCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCAACTCCTTGGGCAGCACCTGGAGATCCCAGAGTCGCAGTGGGAGGAGGGAGCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GNSLGSTWRSQSRSGRRELLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...CTCCCTCCTCCCACTGCGACTCTGGGATCTCCAGGTGCTGCCCAAGGAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGRKDSK*AELEAP
Trigger: GGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: THTQIYAFGFPCAMWARAPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCAGCATTCACAGCGGTaGCAGCAGGAGCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLQHSQR*QQEPCL
Trigger: AAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGAGCACAGGGAGTTTCTaGGTCCCCCTCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PKSTSPVRPTIETPKLFESTGSF*VPLLPE
Trigger: CTCAGGGAGGAGGGGGACCAAGAAACTCCCTGTGCT...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGGCCCAGAGATGGAGCTaGGTAGCCCTCGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEAQRWS*VALGPF
Trigger: AAATGGCCCGAGGGCTACCAAGCTCCATCTCTGGGC...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGGAGCAGAGCGGCCCTaGCTGAAATGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWGAERP*LKWGEG
Trigger: CCCTTCTCCCCATTTCAGCAAGGGCCGCTCTGCTCC...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: LEISEPASALVLLTLSIWTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PVTQVCPGILLRPPPVSAPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...GGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCGGGCTCTCCTGGCGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: DGREVCDPQPILNAGSPGEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...GCCAGGAGAGCCCGCGTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 5 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEEKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCC +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYNQGNS*GSTWRS
Trigger: GGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYSKLAE*EAPLSV
Trigger: TACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHSKLAE*EAPLSV
Trigger: TACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGA...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: KLRHPDGREVCDPQPILNRKDSK*AELEAP
Trigger: GGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCT...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCGGGCTCTCCTGGCCTaGTCTCCCACACCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKRALLA*SPTPPP
Trigger: TGGCGGCGGTGTGGGAGACAAGGCCAGGAGAGCCCG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRRPKRD*GRQRIA
Trigger: TGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCG...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAG +
Preference number: 5 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPATRTS*GLNRPK
Trigger: CTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGC...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGGAGCTTGTGTTGCCTTaGAAGCTCTGGAGACTATGC +
Preference number: 5 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQEELVLP*KLWRLC
Trigger: GCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCTC...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAGACTCTTTCTCCTACCTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: AIPIEGGSQQHSQRLQQETLSPT*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGGTAGGAGAAAGAGT...CTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCTAGTGGCGGCAGCTTaGGCAGCGGCGGCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLVAAA*AAAALA
Trigger: CGCCAAAGCCGCCGCTGCCAAAGCTGCCGCCACTAG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS-3UTR CAA 90 bp CCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTTTCTGCCTTCTTTCCACAGGCCTaGCCACACACAGGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: PVTQVCPGILLRPPPVSAFFPQA*PHTGPN
Trigger: ATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGAA...GGCAGAAACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCTTCTTTCCACAGGCCTaGCCACACACAGGCCCTAAT +
Preference number: 5 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFFFPQA*PHTGPN
Trigger: ATTAGGGCCTGTGTGTGGCAAGGCCTGTGGAAAGAA...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGGCCCAGAGATGGAGCTaGGTAGCCCTCGGGCCATTT +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLAQRWS*VALGPF
Trigger: AAATGGCCCGAGGGCTACCAAGCTCCATCTCTGGGC...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGCTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGACAACCATGAACTTCTaGAGCAGCCCCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: SKLRHPDGREVCDPQPILTTMNF*SSPWMT
Trigger: GGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGT...CAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCCTGGGGGCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGAGCACTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: SLGAGTAEPSCKHLSMEESTCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGTGCT...CTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGCCCCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGCAGGTGGAGGAGTGGAACGTGGACTCAGGAGACCGGGGTTGGGCCTGACTTGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KAGGGVERGLRRPGLGLTCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...AGTCAGGCCCAACCCCGGTCTCCTGAGTCCACGTTCCACTCCTCCACCTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 5 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGAGAAAGGACTCCAAGTaGGCCGAATTGGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLRKDSK*AELEAP
Trigger: GGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTTCT...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAG +
Preference number: 5 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGATRTS*GLNRPK
Trigger: CTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAG +
Preference number: 5 (lower is better)
Translates to: RANTCPWKRLLPQLELLGATRTS*GLNRPK
Trigger: CTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGC...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TGGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAG +
Preference number: 5 (lower is better)
Translates to: WSGITDWSQNSGTQMGGRATRTS*GLNRPK
Trigger: CTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGC...CCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGAGTTGCGAGCTTGTGTaGCCTTTGAAGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LEISEPASALVLLTLSIWSCELV*PLKLWR
Trigger: TCTCCAGAGCTTCAAAGGCAACACAAGCTCGCAACT...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCAGCATTCACAGCGGTaGCAGCAGGAGCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: THTQIYAFGFPCAMWARAQHSQR*QQEPCL
Trigger: AAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTG...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCGTAGCAGCCGAGATCTaGACAGTGATGCTGGAACCA +
Preference number: 5 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLVAAEI*TVMLEP
Trigger: TGGTTCCAGCATCACTGTCAAGATCTCGGCTGCTAC...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACAGCGAAGCCTGGGCTTaGCATGCCTGTCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNSEAWA*HACHSS
Trigger: GCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGCT...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS CCA 90 bp TTTAGTGGGTGGGCTTGGACACAGGTAGGAAGGGAACGGTCTGGTTaGGTTCACTCTTTCTCCTACCTTGTCCGTCCTTGTGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: FSGWAWTQVGRERSG*VHSFSYLVRPCVSA
Trigger: AGCGGATACACAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCACCCACTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGCTGTCGATCTTCTGCTaGATCTCCTGCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWLSIFC*ISCSVG
Trigger: GCCCACACTGCAGGAGATCAAGCAGAAGATCGACAG...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACTTTCTGGAAGAGCACTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHFLEEH*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGTGCTCTTCCAGAAA...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581888.1
CDS-3UTR CAA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATTTCTGGAAGAGCACTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRFLEEH*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGTGCTCTTCCAGAAA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGACCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGGACCGGTTACCCAGGTTTGCCCTGGGATTCTCTTAAGGCCTCCTCCAGTCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 5 (lower is better)
Translates to: SRTGYPGLPWDSLKASSSPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...ACTGGAGGAGGCCTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGACCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: AEPSCKHLSMEETFATAGPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGACTCCAAGTTGGCCGAATTGGAGGCTCCCCTCTCTGTAATCAAGGCAACCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KGLQVGRIGGSPLCNQGNPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...GTTGCCTTGATTACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGAGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: QFGDERGNYLVGERLADREPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGCCAGCCTCAGCTTaGGTGCTCCTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSLVTREATIWLVKGLQIEPASA*VLLTLS
Trigger: GCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTC...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCATGACTGGCTTCCCTTaGGGGAAACACATGACGATG +
Preference number: 5 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAMTGFP*GKHMTM
Trigger: CATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCAT...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCCCACACCGCCGCCATaGTTCACTTCCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGPTPPP*FTSWQE
Trigger: CTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: RGNYLVGERLADRERTSARPKRD*GRQRIA
Trigger: TGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCG...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CACAGCTTTCCACCCTTCTCAGCCTGTTATCTGCTGGGAAATTGGGGTATCTACCGAACAAGCTTGGGCTaGAACCGACCCAAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HSFPPFSACYLLGNWGIYRTSLG*NRPKRD
Trigger: GTCCCTCTTGGGTCGGTTCAAGCCCAAGCTTGTTCG...GTAGATACCCCAATTTCCCAGCAGATAACAGGCTGAGAAGGGTGGAAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAGTTGCGAGCTTGTGTaGCCTTTGAAGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RRYMPLGFHVQCGPGPEPSCELV*PLKLWR
Trigger: TCTCCAGAGCTTCAAAGGCAACACAAGCTCGCAACT...TGGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGAAGTTGCGAGCTTGTGTaGCCTTTGAAGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRSCELV*PLKLWR
Trigger: TCTCCAGAGCTTCAAAGGCAACACAAGCTCGCAACT...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAGTTGCGAGCTTGTGTaGCCTTTGAAGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYSCELV*PLKLWR
Trigger: TCTCCAGAGCTTCAAAGGCAACACAAGCTCGCAACT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAAGCCCTCGGGCCATTTaGAAGCAAAAACAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: ATQPKKALPAVTPTSGRESPRAI*KQKQPV
Trigger: CACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGCT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTGGAGCAGAGCGGCCCTaGCTGAAATGGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TKENDSPPAPFNIQQGESGAERP*LKWGEG
Trigger: CCCTTCTCCCCATTTCAGCAAGGGCCGCTCTGCTCC...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CCAGCCTCCCAACATGCAGACCCTCAGAAAGCAGGTGGAGGAGTGGAACGTGGATCTCATGACCAAGAGTaGCCAGTCTATGAACCATGT +
Preference number: 5 (lower is better)
Translates to: PASQHADPQKAGGGVERGSHDQE*PVYEPC
Trigger: ACATGGTTCATAGACTGGCAACTCTTGGTCATGAGA...TCCACGTTCCACTCCTCCACCTGCTTTCTGAGGGTCTGCATGTTGGGAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QFGDERGNYLVGERLADRLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGACAACCATGAACTTCTaGAGCAGCCCCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLTTMNF*SSPWMT
Trigger: GGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCACAACCATGAACTTCTaGAGCAGCCCCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: THTQIYAFGFPCAMWARATTMNF*SSPWMT
Trigger: GGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: KLRHPDGREVCDPQPILNANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGCCGATGGGGAACCCAAGTAGCCCAGGCCCTCCTCTGCTCTTTAGCTGGGGAAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: RPMGNPSSPGPPLLFSWGSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...TCCCCAGCTAAAGAGCAGAGGAGGGCCTGGGCTACTTGGGTTCCCCATCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGCCTTGTCTCCCACACCGCCGCCATTGTTCACTTCCTGGCAGGAGAAGCCAGCAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: GLVSHTAAIVHFLAGEASSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...GCTGGCTTCTCCTGCCAGGAAGTGAACAATGGCGGCGGTGTGGGAGACAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: THTQIYAFGFPCAMWARATGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: HTYADICLWVSMCNVGQGPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 5 (lower is better)
Translates to: HTYADICLWVSMCNVGQGWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KLRHPDGREVCDPQPILNERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGAGATCTCTGAGCCAGCCTCAGCTTTGGTGCTCCTTACCCTGAGCATCTGGCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: LEISEPASALVLLTLSIWRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...CCAGATGCTCAGGGTAAGGAGCACCAAAGCTGAGGCTGGCTCAGAGATCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCGCGGGAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGATGACTGGCTTCCCTTaGGGGAAACACATGACGATG +
Preference number: 5 (lower is better)
Translates to: PREQSFYEHYPAFRGLAQMTGFP*GKHMTM
Trigger: CATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCAT...CTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTCCCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTGAGCTTGTGTTGCCTTaGAAGCTCTGGAGACTATGC +
Preference number: 5 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGELVLP*KLWRLC
Trigger: GCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCTC...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCGAGCTTGTGTTGCCTTaGAAGCTCTGGAGACTATGC +
Preference number: 5 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITELVLP*KLWRLC
Trigger: GCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCTC...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TTGGTCATTCTCAGGCCATGGGTGGCACCGGCCTGGTTTTACTCCAGTTTATGCGAGCTTGTGTTGCCTTaGAAGCTCTGGAGACTATGC +
Preference number: 5 (lower is better)
Translates to: LVILRPWVAPAWFYSSLCELVLP*KLWRLC
Trigger: GCATAGTCTCCAGAGCTTCAAAGGCAACACAAGCTC...GCATAAACTGGAGTAAAACCAGGCCGGTGCCACCCATGGCCTGAGAATGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGACAGCATTCACAGCGGTaGCAGCAGGAGCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: QFGDERGNYLVGERLADRQHSQR*QQEPCL
Trigger: AAGGCATGGCTCCTGCTGCAACCGCTGTGAATGCTG...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGATGGCAGAAGGCAATTaGGACTTCCATCAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLMAEGN*DFHQAD
Trigger: GTCAGCCTGATGGAAGTCCAAATTGCCTTCTGCCAT...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCTGTCGATCTTCTGCTaGATCTCCTGCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWLSIFC*ISCSVG
Trigger: GCCCACACTGCAGGAGATCAAGCAGAAGATCGACAG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCTGATGTGCAGCTGCTaGATGGCATCTAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGLMCSC*MASRGR
Trigger: CCTGCCCCTAGATGCCATCAAGCAGCTGCACATCAG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAGCACTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYSTCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGTGCT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACTCGATGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KEGTTSSYSHLWEGTGTRCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...TCGAGTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGGGGCAGTATGGACTCCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VHTTRGQHSFWDQGQYGLLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...GAGTCCATACTGCCCCTGATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: AGTAEPSCKHLSMEETFAEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GTGACAAACACTGAGACCTTCCCCTGTTGGTCATTCTCAGGCCATGGGTGGCACGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VTNTETFPCWSFSGHGWHEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...GTGCCACCCATGGCCTGAGAATGACCAACAGGGGAAGGTCTCAGTGTTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: RANTCPWKRLLPQLELLGERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGACCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: AGTAEPSCKHLSMEETFARRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGATGACTGGCTTCCCTTaGGGGAAACACATGACGATG +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWMTGFP*GKHMTM
Trigger: CATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCAT...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGAGTTGCGAGCTTGTGTaGCCTTTGAAGCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LVQTLVHGRDFCHSWNCWSCELV*PLKLWR
Trigger: TCTCCAGAGCTTCAAAGGCAACACAAGCTCGCAACT...CCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCCTACCTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: TQIYAFGFPCAMWARARALPCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGGTAG...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CAA 90 bp AGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTAGCAGCCGAGATCTaGACAGTGATGCTGGAACCA +
Preference number: 5 (lower is better)
Translates to: RGNYLVGERLADRERTSAVAAEI*TVMLEP
Trigger: TGGTTCCAGCATCACTGTCAAGATCTCGGCTGCTAC...AGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCAGCGAAGCCTGGGCTTaGCATGCCTGTCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVSEAWA*HACHSS
Trigger: GCTGCTATGACAGGCATGCAAAGCCCAGGCTTCGCT...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCCATCCCCATAGAGGGAGGTTCTCAGCAGCATTCACAGCGGTTGCAGCAGGAATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SHPHRGRFSAAFTAVAAGILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...TCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGACCGGTTACCCAGGTTaGCCCTGGGATTCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWTGYPG*PWDSLK
Trigger: CTTAAGAGAATCCCAGGGCAAACCTGGGTAACCGGT...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 5 (lower is better)
Translates to: HTYADICLWVSMCNVGQGPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...GCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTAATCAAGGCAACTCCTaGGGCAGCACCTGGAGATCC +
Preference number: 5 (lower is better)
Translates to: TKENDSPPAPFNIQQGESNQGNS*GSTWRS
Trigger: GGATCTCCAGGTGCTGCCCAAGGAGTTGCCTTGATT...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: TKENDSPPAPFNIQQGESSKLAE*EAPLSV
Trigger: TACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGA...ACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCGACCCAAGAGGGACTaGGGAAGGCAGAGGATAGCA +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKRPKRD*GRQRIA
Trigger: TGCTATCCTCTGCCTTCCCAAGTCCCTCTTGGGTCG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGAGCCCTCGGGCCATTTaGAAGCAAAAACAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWSPRAI*KQKQPV
Trigger: CACAGGCTGTTTTTGCTTCAAAATGGCCCGAGGGCT...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGTCTCATGACCAAGAGTaGCCAGTCTATGAACCATGT +
Preference number: 5 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLSHDQE*PVYEPC
Trigger: ACATGGTTCATAGACTGGCAACTCTTGGTCATGAGA...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCAGGATCTGGTGCTTTTaGGAGACCGAGCGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGRIWCF*ETERLF
Trigger: GAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCACAACCATGAACTTCTaGAGCAGCCCCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGTTMNF*SSPWMT
Trigger: GGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGT...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCTGGAGACTATGCACAGTTCATACGACGAGGGGTCAGCATTCCTTCTGGGATCAGCACTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: SGDYAQFIRRGVSIPSGISTCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGTGCT...GATCCCAGAAGGAATGCTGACCCCTCGTCGTATGAACTGTGCATAGTCTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCTTTCTGGAAGAGCACTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: SSLVTREATIWLVKGLQIFLEEH*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGTGCTCTTCCAGAAA...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGACGAAGGAAAATGACTCTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGATTTCTGGAAGAGCACTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: GRRKMTLHLLPLIYSRERFLEEH*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGTGCTCTTCCAGAAA...TCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAGAGTCATTTTCCTTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAACTCAGGCACCCAGATGGGAGGGAGGTCTGTGACCCTCAACCCATACTGAACATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KLRHPDGREVCDPQPILNILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...GTTCAGTATGGGTTGAGGGTCACAGACCTCCCTCCCATCTGGGTGCCTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCTTCTGGGATCAGGGGCAGTATGGACTCAGCCTGGGTCAGAGAGGGAACTTCAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: SFWDQGQYGLSLGQRGNFSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...GAAGTTCCCTCTCTGACCCAGGCTGAGTCCATACTGCCCCTGATCCCAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: AEPSCKHLSMEETFATAGEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...TCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCTGGTTGGTGAAAGGCTaGCAGATCGAGAGAGGACGT +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGWLVKG*QIERGR
Trigger: ACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCA...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TQIYAFGFPCAMWARARAKTSPA*KITSPS
Trigger: AGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTT...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS TCA 90 bp TGGATTTTGTCCTGCTCCTCTTTTTCCAGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAGGCATCCCACTTGTCCGTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: WILSCSSFSRIVRKF*SSGMEKASHLSVLV
Trigger: CACAAGGACGGACAAGTGGGATGCCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGACAAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580449.5
CDS-3UTR CAA 90 bp ACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCAGAGCCTTCTTTGAAAGATGTTaGCTCTGCGCATTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: TQIYAFGFPCAMWARARAFFERC*LCAFLK
Trigger: TTTCAGAAATGCGCAGAGCAAACATCTTTCAAAGAA...GGCTCTGGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR CAA 90 bp CGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCACAGCTGGAACTGCTGGGCCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RANTCPWKRLLPQLELLGPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...GCCCAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CCCAAGAGCACAAGCCCTGTGCGGCCAACAATTGAGACTCCTAAGCTCTTTGAGCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: PKSTSPVRPTIETPKLFEPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...CTCAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAGGGCTTGTGCTCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp CTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTCTGCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LVSLIGVKTQAPRWEGGLPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...CAGACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCAACACAACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAAATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ATQPKKALPAVTPTSGREILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...TTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTTGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TGTGAACAACAGGCACCTTGGGGCCGCGGGAACAGTCCTTTTATGAGCATTACCATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: CEQQAPWGRGNSPFMSITILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...GGTAATGCTCATAAAAGGACTGTTCCCGCGGCCCCAAGGTGCCTGTTGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GCGGGCACAGCTGAACCCTCGTGCAAACACTTGTCCATGGAAGAGACTTTTGCCCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: AGTAEPSCKHLSMEETFALVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GGCAAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGGTTCAGCTGTGCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACCAAAGAAGGCACTACCAGCAGTTACTCCCACCTCTGGGAGGGAACGGGTACAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: NQRRHYQQLLPPLGGNGYSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...GTACCCGTTCCCTCCCAGAGGTGGGAGTAACTGCTGGTAGTGCCTTCTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GGTCTGGTATCACTGATTGGAGTCAAAACTCAGGCACCCAGATGGGAGGGAGGTAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: GLVSLIGVKTQAPRWEGGKTSPA*KITSPS
Trigger: AGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTT...ACCTCCCTCCCATCTGGGTGCCTGAGTTTTGACTCCAATCAGTGATACCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGAAGGGAACGGTCTGGTaGGGTTCACTCTTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLKGTVW*GSLFLL
Trigger: TAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCTT...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581503.6
CDS-3UTR CAA 90 bp TGCAGATCGAGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCCCACTTGTCCGTCCTaGTGTATCCGCTTAAAAAGT +
Preference number: 5 (lower is better)
Translates to: CRSREDVSCLFHMSSDPWPTCPS*CIRLKS
Trigger: ACTTTTTAAGCGGATACACAAGGACGGACAAGTGGG...CCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCTCGATCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580449.5
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCTGTGCGGCCAACAATaGAGACTCCTAAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGLCGQQ*RLLSSL
Trigger: CAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAG...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS-3UTR CAA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCTGTGCGGCCAACAATaGAGACTCCTAAGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: NYLVGERLADRERTSAVCLCGQQ*RLLSSL
Trigger: CAAAGAGCTTAGGAGTCTCAATTGTTGGCCGCACAG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581503.6
ENST00000581888.1
CDS TCA 90 bp TGGATTTTGTCCTGCTCCTCTTTTTCCAGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAGGCATCCCACTCTACCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: WILSCSSFSRIVRKF*SSGMEKASHSTSPV
Trigger: AACTGGAGAGGTAGAGTGGGATGCCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGACAAAATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000579942.2
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGGTTTACAGACATTCTTaGAAAGATGTTTGCTCTGCG +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLVYRHS*KDVCSA
Trigger: CGCAGAGCAAACATCTTTCAAAGAATGTCTGTAAAC...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS-3UTR CAA 90 bp AGTCAGGAATTTGATCCTCCCTGTCAATGTGGTCTGGTATCACTGATTGGAGTCGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: SQEFDPPCQCGLVSLIGVANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...GACTCCAATCAGTGATACCAGACCACATTGACAGGGAGGATCAAATTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCGCAAACTTCTGGGGATaGTCCACAACCATGAACTTC +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGANFWG*STTMNF
Trigger: GAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAATGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LHLLPLIYSRERVSKGRECTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGTGGCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: EDVSCLFHMSSDPWQNLWLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...CCACAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: EATIWLVKGLQIERGRQLILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...CAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAGTACCACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KYHTYADICLWVSMCNVGERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...GCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGTGGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTCCTTTCTTCCTTCCTTaGCCGGCTGGTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: RIQPKQEASANVSQEFDPPFFLP*PAGVRF
Trigger: GAACCTCACACCAGCCGGCAAAGGAAGGAAGAAAGG...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAACGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: LHLLPLIYSRERVSKGRERRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGATGACTGGCTTCCCTTaGGGGAAACACATGACGATG +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKMTGFP*GKHMTM
Trigger: CATCGTCATGTGTTTCCCCAAAGGGAAGCCAGTCAT...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTTGCACTTGTTGGATTTaGTCCTGCTCCTCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: NYLVGERLADRERTSAVCCTCWI*SCSSFS
Trigger: GGAAAAAGAGGAGCAGGACAAAATCCAACAAGTGCA...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCTTCTTTTGCACTTGTaGGATTTTGTCCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLLLHL*DFVLLL
Trigger: GAGGAGCAGGACAAAATCCAACAAGTGCAAAAGAAG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ACACATACGCAGATATATGCCTTTGGGTTTCCATGTGCAATGTGGGCCAGGGCCCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: THTQIYAFGFPCAMWARALVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GGCCCTGGCCCACATTGCACATGGAAACCCAAAGGCATATATCTGCGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTGAGGACGTCAGCTGTTaGTTTCACATGAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: NYLVGERLADRERTSAVCEDVSC*FHMSSD
Trigger: ATCAGAACTCATGTGAAACAAACAGCTGACGTCCTC...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AACTATTTGGTTGGTGAAAGGCTTGCAGATCGAGAGAGGACGTCAGCTGTTTGTCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: NYLVGERLADRERTSAVCRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...ACAAACAGCTGACGTCCTCTCTCGATCTGCAAGCCTTTCACCAACCAAATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGTCCAAGTTGGCCGAATaGGAGGCTCCCCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKSKLAE*EAPLSV
Trigger: TACAGAGAGGGGAGCCTCCAATTCGGCCAACTTGGA...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGCTACACGAACAAGCTaGGGCTTGAACCGACCCAAG +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKATRTS*GLNRPK
Trigger: CTTGGGTCGGTTCAAGCCCAAGCTTGTTCGTGTAGC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGGAGAAGGCATCCCACTaGTCCGTCCTTGTGTATCCG +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKEKASH*SVLVYP
Trigger: CGGATACACAAGGACGGACAAGTGGGATGCCTTCTC...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580449.5
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGACAACCATGAACTTCTaGAGCAGCCCCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKTTMNF*SSPWMT
Trigger: GGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGT...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCCTCTTTTTCCAGGATaGTTAGGAAGTTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SSLVTREATIWLVKGLQIPLFPG*LGSSEV
Trigger: AACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp GAACAGTCCTTTTATGAGCATTACCCTGCTTTCAGGGGCTTAGCTCAGACCTGCAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: EQSFYEHYPAFRGLAQTCSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...GCAGGTCTGAGCTAAGCCCCTGAAAGCAGGGTAATGCTCATAAAAGGACTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGCCATGGAAGAGACTTTaGCCACAGCTGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKPWKRL*PQLELL
Trigger: CAGCAGTTCCAGCTGTGGCAAAAGTCTCTTCCATGG...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGCAGAGCTTCAGGCAAACTCGCCCTACTCCTATTTCTCTCTGAAAACAAAAAGCGCAGATATATGCCTTaGGGTTTCCATGTGCAATGT +
Preference number: 5 (lower is better)
Translates to: SRASGKLALLLFLSENKKRRYMP*GFHVQC
Trigger: ACATTGCACATGGAAACCCAAAGGCATATATCTGCG...CTTTTTGTTTTCAGAGAGAAATAGGAGTAGGGCGAGTTTGCCTGAAGCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CTCCACCTGCTCCCTTTAATATACAGCAGGGAGAGAGTTTCTAAAGGGAGGGAAAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LHLLPLIYSRERVSKGREKTSPA*KITSPS
Trigger: AGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTT...TTCCCTCCCTTTAGAAACTCTCTCCCTGCTGTATATTAAAGGGAGCAGGTGGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp CAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCGAAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QFGDERGNYLVGERLADRKTSPA*KITSPS
Trigger: AGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTT...TCGATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp TCCAGTTTGGTGACGAGAGAGGCAACTATTTGGTTGGTGAAAGGCTTGCAGATCCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: SSLVTREATIWLVKGLQILVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...GATCTGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTCGTCACCAAACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTGAGAGAGGCAACTATTaGGTTGGTGAAAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: RIQPKQEASANVSQEFDPERGNY*VGERLA
Trigger: TGCAAGCCTTTCACCAACCAAATAGTTGCCTCTCTC...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTAAGGCTGAAGACAGCTaGGACACCTTTCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: RIQPKQEASANVSQEFDPKAEDS*DTFLCI
Trigger: AATGCAGAGAAAGGTGTCCAAGCTGTCTTCAGCCTT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGAGAGGACGTCAGCTGTTTGTTTCACATGAGTTCTGATCCTTGGCAGAATCTGCTTGTCATACTTCTTTaGCACTTGTTGGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: REDVSCLFHMSSDPWQNLLVILL*HLLDFV
Trigger: GACAAAATCCAACAAGTGCAAAAGAAGTATGACAAG...CAGATTCTGCCAAGGATCAGAACTCATGTGAAACAAACAGCTGACGTCCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AAAGGAATGTGCTACAACTTTTCACTCATAAATAATGGTCCTGTACGTGGCAAGCCCTCGTGCAAACACTaGTCCATGGAAGAGACTTTT +
Preference number: 5 (lower is better)
Translates to: KGMCYNFSLINNGPVRGKPSCKH*SMEETF
Trigger: AAAAGTCTCTTCCATGGACAAGTGTTTGCACGAGGG...CTTGCCACGTACAGGACCATTATTTATGAGTGAAAAGTTGTAGCACATTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp AGGATTCAGCCTAAACAAGAAGCCAGTGCAAATGTAAGTCAGGAATTTGATCCTATACTTCTTTTGCACTaGTTGGATTTTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: RIQPKQEASANVSQEFDPILLLH*LDFVLL
Trigger: GAGCAGGACAAAATCCAACAAGTGCAAAAGAAGTAT...AGGATCAAATTCCTGACTTACATTTGCACTGGCTTCTTGTTTAGGCTGAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS-3UTR CAA 90 bp ATGGTGAAGTTCAAGGGAGACGTTTCTAACATGAGTCATTTTTGCAACAGGCTTAGTTTCTGCCTAAACTaGTCATACTTCTTTTGCACT +
Preference number: 5 (lower is better)
Translates to: MVKFKGDVSNMSHFCNRLSFCLN*SYFFCT
Trigger: AGTGCAAAAGAAGTATGACAAGTTTAGGCAGAAACT...AAGCCTGTTGCAAAAATGACTCATGTTAGAAACGTCTCCCTTGAACTTCACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000636182.1
CDS-3UTR CAA 90 bp TTGGCTTTCTCTTACTGTCTGATTTCCATACTTAGCAGGAGACTTTTTAAATGGAAAACCAGCCCTGCTTaGAAAATTACAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LAFSYCLISILSRRLFKWKTSPA*KITSPS
Trigger: AGAAGGACTTGTAATTTTCAAAGCAGGGCTGGTTTT...CCATTTAAAAAGTCTCCTGCTAAGTATGGAAATCAGACAGTAAGAGAAAGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581503.6
ENST00000581888.1
ENST00000636182.1
CDS GCA 72 bp ACGGGCGCTGCCCGATGGCCGGGGACGCCATGGCCATaGCCGGCTAGTGGCGGCAGCTTTGGCAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: TGAARWPGTPWP*PASGGSFGSGG
Trigger: GCCGCCGCTGCCAAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS GCA 72 bp CCGGGGCCGCCCGGCAGCACCAACTCGGCGAAGCAGTaGCCCTCGCCTCGCTCCGCCGGGACTCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: PGPPGSTNSAKQ*PSPRSAGTLGS
Trigger: GGATCCCAGAGTCCCGGCGGAGCGAGGCGAGGGGCACTGCTTCGCCGAGTTGGTGCTGCCGGGCGGCCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS GCA 72 bp CCGGCTCGCGCCTCACTCCCTGACTCGTCCGGGCTCTaGGGTTTCGTGTCCCCGGCGCCAGCGCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PARASLPDSSGL*GFVSPAPAPSL
Trigger: GAGGGAGGGCGCTGGCGCCGGGGACACGAAACCGCAGAGCCCGGACGAGTCAGGGAGTGAGGCGCGAGCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS GCA 72 bp GGCGGCTCGGGGTCCAATAGTAGCGGGTACGGGCGCTaGCCGATGGCCGGGGACGCCATGGCCATGCCCGGC +
Preference number: 6 (lower is better)
Translates to: GGSGSNSSGYGR*PMAGDAMAMPG
Trigger: GCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGTACCCGCTACTATTGGACCCCGAGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS GCA 72 bp CCGCCGGGACTCTGGGATCCTGCGGCTGCTCGAAGATaGTCCGCACGTCGCGGGGTCGGGGCGCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PPGLWDPAAARR*SARRGVGALQA
Trigger: GGCCTGGAGCGCCCCGACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CCA 72 bp GCGGGTACGGGCGCTGCCCGATGGCCGGGGACGCCATaGCCATGCCCGGCTAGTGGCGGCAGCTTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: AGTGAARWPGTP*PCPASGGSFGS
Trigger: GCTGCCAAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGTACCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS GCA 72 bp TCGCCTCGCTCCGCCGGGACTCTGGGATCCTGCGGCTaGTCGAAGATGCTCCGCACGTCGCGGGGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: SPRSAGTLGSCG*SKMLRTSRGRG
Trigger: GCCCCGACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CAA 90 bp GATGGCCGGGGACGCCATGGCCATGCCCGGCTAGTGGCGGCAGCTTaGGCAGCGGCGGCTTTGGCGACTGCGCTACTCCCGAGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DGRGRHGHARLVAAA*AAAALATALLPSQP
Trigger: GGGCTGGCTCGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCAAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS GCA 72 bp AGAGCCGGCGGGCCGCCTGCGTTTCTTTCAGCGGGGTaGGAGCGCTCGGGCGGCCCGGTAACCTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: RAGGPPAFLSAG*ERSGGPVTCSC
Trigger: ACAGGAGCAGGTTACCGGGCCGCCCGAGCGCTCGCACCCCGCTGAAAGAAACGCAGGCGGCCCGCCGGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS GCA 72 bp TGCCCCTCGCCTCGCTCCGCCGGGACTCTGGGATCCTaGGGCTGCTCGAAGATGCTCCGCACGTCGCGGGGT +
Preference number: 6 (lower is better)
Translates to: CPSPRSAGTLGS*GCSKMLRTSRG
Trigger: ACCCCGCGACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCGAGGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CCA 72 bp CGGGGTCCAATAGTAGCGGGTACGGGCGCTGCCCGATaGCCGGGGACGCCATGGCCATGCCCGGCTAGTGGC +
Preference number: 6 (lower is better)
Translates to: RGPIVAGTGAAR*PGTPWPCPASG
Trigger: GCCACTAGCCGGGCATGGCCATGGCGTCCCCGGCCATCGGGCAGCGCCCGTACCCGCTACTATTGGACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS CAA 72 bp GCCCGGCTAGTGGCGGCAGCTTTGGCAGCGGCGGCTTaGGCGACTGCGCTACTCCCGAGCCAGCCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: ARLVAAALAAAA*ATALLPSQPRE
Trigger: CTCTCGGGGCTGGCTCGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCAAAGCTGCCGCCACTAGCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579436.7
CDS CAA 72 bp GGACGCCATGGCCATGCCCGGCTAGTGGCGGCAGCTTaGGCAGCGGCGGCTTTGGCGACTGCGCTACTCCCG +
Preference number: 6 (lower is better)
Translates to: GRHGHARLVAAA*AAAALATALLP
Trigger: CGGGAGTAGCGCAGTCGCCAAAGCCGCCGCTGCCAAAGCTGCCGCCACTAGCCGGGCATGGCCATGGCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579436.7
ENST00000580449.5
CDS CCA 72 bp CGAAGCAGTGCCCCTCGCCTCGCTCCGCCGGGACTCTaGGATCCTGCGGCTGCTCGAAGATGCTCCGCACGT +
Preference number: 6 (lower is better)
Translates to: RSSAPRLAPPGL*DPAAARRCSAR
Trigger: ACGTGCGGAGCATCTTCGAGCAGCCGCAGGATCCCAGAGTCCCGGCGGAGCGAGGCGAGGGGCACTGCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CAA 90 bp GCCCTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTGGTGCTTTTaGGAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: ALRAPLRNLCRIWCF*ETERLFGSLQKSRW
Trigger: CCAGCGGCTCTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS GCA 72 bp CAGTCCCGAGCCCTCCGGGCCCCGTTGCGGAACCTCTaGAGGATCTGGTGCTTTTTGGAGACCGAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: QSRALRAPLRNL*RIWCFLETERL
Trigger: GAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGCTCGGGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS CCA 72 bp GCCCTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTaGTGCTTTTTGGAGACCGAGCGGCTCTTCGGGAGC +
Preference number: 6 (lower is better)
Translates to: ALRAPLRNLCRI*CFLETERLFGS
Trigger: GCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS CAA 90 bp GGCAGAGGCGCCAAACCCGAAGCGGGTGGTGGAGCAGGGGCCAGGTaGAGGGTGGACGGGCGCTTACCAGTTTCATGCCCAGGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: GRGAKPEAGGGAGAR*RVDGRLPVSCPGSS
Trigger: AGAACTGCCTGGGCATGAAACTGGTAAGCGCCCGTCCACCCTCAACCTGGCCCCTGCTCCACCACCCGCTTCGGGTTTGGCGCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS TCA 72 bp CGGCTCTTCGGGAGCCTGCAGAAGAGCCGCTGGAGCTaGGCAGTGACTGTCCCAAAGCAGGCAGCGGTTGCC +
Preference number: 6 (lower is better)
Translates to: RLFGSLQKSRWS*AVTVPKQAAVA
Trigger: GGCAACCGCTGCCTGCTTTGGGACAGTCACTGCTCAGCTCCAGCGGCTCTTCTGCAGGCTCCCGAAGAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS GCA 72 bp CTCCGGGCCCCGTTGCGGAACCTCTGCAGGATCTGGTaGTTTTTGGAGACCGAGCGGCTCTTCGGGAGCCTG +
Preference number: 6 (lower is better)
Translates to: LRAPLRNLCRIW*FLETERLFGSL
Trigger: CAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS TCA 72 bp CCAACTGGATCAGGCTGCGGCATTCTGGGTGACAGGTaGATTTACAGTCCCGAGCCCTCCGGGCCCCGTTGC +
Preference number: 6 (lower is better)
Translates to: PTGSGCGILGDR*IYSPEPSGPRC
Trigger: GCAACGGGGCCCGGAGGGCTCGGGACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS GCA 72 bp CCAGTTCCTCGTCCAGGCTGCAGTACCCACTGCTCATaGTGCTGTCCACGGTCATCTACCCCGGAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: PVPRPGCSTHCS*CCPRSSTPEFP
Trigger: CGGGAACTCCGGGGTAGATGACCGTGGACAGCAGCATGAGCAGTGGGTACTGCAGCCTGGACGAGGAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577571.5
CDS CAA 72 bp GCCCCGTTGCGGAACCTCTGCAGGATCTGGTGCTTTTaGGAGACCGAGCGGCTCTTCGGGAGCCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: APLRNLCRIWCF*ETERLFGSLQK
Trigger: CTTCTGCAGGCTCCCGAAGAGCCGCTCGGTCTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS TCA 72 bp CTGCAGTCCAACTGGATCAGGCTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTCCCGAGCCCTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LQSNWIRLRHSG*QVNLQSRALRA
Trigger: GGCCCGGAGGGCTCGGGACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS CCA 72 bp CAGCTCCCACCCAAGGCCGGCAGGAGTTTTAGTGGGTaGGCTTGGACACAGGTAGGAAGGGAACGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: QLPPKAGRSFSG*AWTQVGRERSG
Trigger: ACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCACCCACTAAAACTCCTGCCGGCCTTGGGTGGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS GCA 72 bp AGTCTTCCAGTTCCTCGTCCAGGCTGCAGTACCCACTaGTCATGCTGCTGTCCACGGTCATCTACCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SLPVPRPGCSTH*SCCCPRSSTPE
Trigger: CTCCGGGGTAGATGACCGTGGACAGCAGCATGAGCAGTGGGTACTGCAGCCTGGACGAGGAACTGGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577571.5
ENST00000605120.1
CDS GCA 72 bp GAGAGGGTCTGTCCCGGGATAAACCCTCCTGCTGACTaGAGTCCAACTGGATCAGGCTGCGGCATTCTGGGT +
Preference number: 6 (lower is better)
Translates to: ERVCPGINPPAD*SPTGSGCGILG
Trigger: ACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATCCCGGGACAGACCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS CCA 72 bp CCACCCAAGGCCGGCAGGAGTTTTAGTGGGTGGGCTTaGACACAGGTAGGAAGGGAACGGTCTGGTTGGGTT +
Preference number: 6 (lower is better)
Translates to: PPKAGRSFSGWA*TQVGRERSGWV
Trigger: AACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCACCCACTAAAACTCCTGCCGGCCTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS CAA 72 bp CAGGTGAATTTACAGTCCCGAGCCCTCCGGGCCCCGTaGCGGAACCTCTGCAGGATCTGGTGCTTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: QVNLQSRALRAP*RNLCRIWCFLE
Trigger: CTCCAAAAAGCACCAGATCCTGCAGAGGTTCCGCAACGGGGCCCGGAGGGCTCGGGACTGTAAATTCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS TCA 72 bp TCTGGAGAGGGTCTGTCCCGGGATAAACCCTCCTGCTaGCTGCAGTCCAACTGGATCAGGCTGCGGCATTCT +
Preference number: 6 (lower is better)
Translates to: SGEGLSRDKPSC*LQSNWIRLRHS
Trigger: AGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAGCAGGAGGGTTTATCCCGGGACAGACCCTCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000636182.1
CDS GCA 72 bp GCCAGGTTGAGGGTGGACGGGCGCTTACCAGTTTCATaGCCAGGCAGTTCTTCTCTCGCGTGTTGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: ARLRVDGRLPVS*PGSSSLACCSC
Trigger: ACAGCTACAACACGCGAGAGAAGAACTGCCTGGGCATGAAACTGGTAAGCGCCCGTCCACCCTCAACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS CCA 72 bp CAGCAAGCAGGCGCAGGTAGAGGGGGCGGTCAGCAATaGAGAGTTTCTGGAAGAGCACTTGTCCGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: QQAGAGRGGGQQ*RVSGRALVRPC
Trigger: ACAAGGACGGACAAGTGCTCTTCCAGAAACTCTCCATTGCTGACCGCCCCCTCTACCTGCGCCTGCTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS CCA 72 bp CTGACTGCAGTCCAACTGGATCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACAGTCCCGAGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: LTAVQLDQAAAF*VTGEFTVPSPP
Trigger: CGGAGGGCTCGGGACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636182.1
CDS TCA 72 bp TCTTCTCTCGCGTGTTGTAGCTGTCGATCTTCTGCTTaGTCTCCTGCAGTGTGGGCGGGCGCTGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: SSLACCSCRSSA*SPAVWAGAVSP
Trigger: AGGAGACACAGCGCCCGCCCACACTGCAGGAGATCAAGCAGAAGATCGACAGCTACAACACGCGAGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000605120.1
ENST00000605653.1
ENST00000636182.1
CDS TCA 72 bp CTGCAGTCCAACTGGATCAGGCTGCGGCATTCTGGGTaGCAGGTGAATTTACAGTTAGTGCAGCGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: LQSNWIRLRHSG*QVNLQLVQRSA
Trigger: GGCGCTGCGCTGCACTAACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CCA 72 bp TGGGTGGGCTTGGACACAGGTAGGAAGGGAACGGTCTaGTTGGGTTCACTCTTTCTCCTACCTTGTCCGTCC +
Preference number: 6 (lower is better)
Translates to: WVGLDTGRKGTV*LGSLFLLPCPS
Trigger: GGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS TCA 72 bp AGTCAGATCTATTTCCCTAAAGCACATGGAGGCCACTaGGGGCTCTGGCTATCAGCCTTCCAGACCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SQIYFPKAHGGH*GLWLSAFQTPE
Trigger: CTCCGGGGTCTGGAAGGCTGATAGCCAGAGCCCTCAGTGGCCTCCATGTGCTTTAGGGAAATAGATCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605120.1
CDS CAA 72 bp GTGGGCTTGGACACAGGTAGGAAGGGAACGGTCTGGTaGGGTTCACTCTTTCTCCTACCTTGTCCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: VGLDTGRKGTVW*GSLFLLPCPSL
Trigger: CAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS GCA 72 bp CAAAGCCTCTCTAACCAAGAAGTGAGCATCCAGCCCTaGAGAGTGGAACTAACTGCACGGACTCGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: QSLSNQEVSIQP*RVELTARTRSE
Trigger: CTCACTCCGAGTCCGTGCAGTTAGTTCCACTCTGCAGGGCTGGATGCTCACTTCTTGGTTAGAGAGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605653.1
CDS CCA 72 bp TGGGCTTGGACACAGGTAGGAAGGGAACGGTCTGGTTaGGTTCACTCTTTCTCCTACCTTGTCCGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: WAWTQVGRERSG*VHSFSYLVRPC
Trigger: ACAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCCTTCCTACCTGTGTCCAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS CCA 72 bp CTGACTGCAGTCCAACTGGATCAGGCTGCGGCATTCTaGGTGACAGGTGAATTTACAGTTAGTGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LTAVQLDQAAAF*VTGEFTVSAAQ
Trigger: CTGCGCTGCACTAACTGTAAATTCACCTGTCACCCAGAATGCCGCAGCCTGATCCAGTTGGACTGCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579436.7
ENST00000580449.5
ENST00000581503.6
CDS CAA 72 bp GCAAACTTCTGGGGATTGTCCACAACCATGAACTTCTaGAGCAGCCCCTGGATGACCTCACTGACGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ANFWGLSTTMNF*SSPWMTSLTVV
Trigger: CACCACCGTCAGTGAGGTCATCCAGGGGCTGCTCAAGAAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000579942.2
ENST00000580449.5
ENST00000581503.6
ENST00000581888.1
ENST00000605653.1
ENST00000636182.1
CDS CAA 90 bp GGAACGGTCTGGTTGGGTTCACTCTTTCTCCTACCTTGTCCGTCCTaGTGTATCCGCTTAAAAAGTGCAAACTTCTGGGGATTGTCCACA +
Preference number: 6 (lower is better)
Translates to: GTVWLGSLFLLPCPS*CIRLKSANFWGLST
Trigger: TGTGGACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS TCA 72 bp TCCTGCTCCTCTTTTTCCAGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAGGCATCCCACTCTACC +
Preference number: 6 (lower is better)
Translates to: SCSSFSRIVRKF*SSGMEKASHST
Trigger: GGTAGAGTGGGATGCCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000579942.2
ENST00000636182.1
CDS TCA 72 bp TCCTGCTCCTCTTTTTCCAGGATTGTTAGGAAGTTCTaGAGTTCAGGGATGGAGAAGGCATCCCACTTGTCC +
Preference number: 6 (lower is better)
Translates to: SCSSFSRIVRKF*SSGMEKASHLS
Trigger: GGACAAGTGGGATGCCTTCTCCATCCCTGAACTTCAGAACTTCCTAACAATCCTGGAAAAAGAGGAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580449.5
CDS CAA 72 bp GGGAACGGTCTGGTTGGGTTCACTCTTTCTCCTACCTaGTCCGTCCTTGTGTATCCGCTTAAAAAGTGCAAA +
Preference number: 6 (lower is better)
Translates to: GNGLVGFTLSPT*SVLVYPLKKCK
Trigger: TTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCAGACCGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS CAA 72 bp TGGTTGGGTTCACTCTTTCTCCTACCTTGTCCGTCCTaGTGTATCCGCTTAAAAAGTGCAAACTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: WLGSLFLLPCPS*CIRLKSANFWG
Trigger: TCCCCAGAAGTTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGGTAGGAGAAAGAGTGAACCCAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS GCA 72 bp GAGCACTTGTCCGTCCTTGTGTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTCCACAACCATGAACTT +
Preference number: 6 (lower is better)
Translates to: EHLSVLVYPLKK*KLLGIVHNHEL
Trigger: AAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000577571.5
ENST00000579436.7
ENST00000581888.1
ENST00000636182.1
CDS GCA 72 bp CCTACCTTGTCCGTCCTTGTGTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTCCACAACCATGAACTT +
Preference number: 6 (lower is better)
Translates to: PTLSVLVYPLKK*KLLGIVHNHEL
Trigger: AAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579942.2
ENST00000581503.6
CDS GCA 72 bp TCCCACTTGTCCGTCCTTGTGTATCCGCTTAAAAAGTaGAAACTTCTGGGGATTGTCCACAACCATGAACTT +
Preference number: 6 (lower is better)
Translates to: SHLSVLVYPLKK*KLLGIVHNHEL
Trigger: AAGTTCATGGTTGTGGACAATCCCCAGAAGTTTGCACTTTTTAAGCGGATACACAAGGACGGACAAGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000580449.5
ENST00000605653.1