RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASSF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101265

Ensembl transcript IDs: ENST00000379376.2, ENST00000379400.8, ENST00000478553.1

Found 597 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCGGTGGCTACTCTTTGTCTTCTTACCCCAGTTCTGTGCAGCTTaGAGAAGCCCTTCTGGGCTTCCACTCCATGCCCCACAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: SRWLLFVFLPQFCAA*RSPSGLPLHAPQGW
Trigger: CCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp AGAAGCCCTTCTGGGCTTCCACTCCATGCCCCACAGGGCTGGTGCTaGTGTCCCTATGGAGGAAGGAGACTTGCTATAAAACCCTTGGCG +
Preference number: 1 (lower is better)
Translates to: RSPSGLPLHAPQGWC*CPYGGRRLAIKPLA
Trigger: CGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp TGGGCTTCCACTCCATGCCCCACAGGGCTGGTGCTGCTGTCCCTATaGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGG +
Preference number: 1 (lower is better)
Translates to: WASTPCPTGLVLLSL*RKETCYKTLGEMPG
Trigger: CCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp GCTTGCAGAAGCCCTTCTGGGCTTCCACTCCATGCCCCACAGGGCTaGTGCTGCTGTCCCTATGGAGGAAGGAGACTTGCTATAAAACCC +
Preference number: 1 (lower is better)
Translates to: ACRSPSGLPLHAPQG*CCCPYGGRRLAIKP
Trigger: GGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp CTTTGTCTTCTTACCCCAGTTCTGTGCAGCTTGCAGAAGCCCTTCTaGGCTTCCACTCCATGCCCCACAGGGCTGGTGCTGCTGTCCCTA +
Preference number: 1 (lower is better)
Translates to: LCLLTPVLCSLQKPF*ASTPCPTGLVLLSL
Trigger: TAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp CCTCTACCCCAGCTAGGCTCAAAGACGCCTGCTATCAGGAGCTCCTaGTCTTGCTTGGTCAATCTCCATAGCCAGGCACCCAGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: PLPQLGSKTPAIRSS*SCLVNLHSQAPRSK
Trigger: CTTGGACCTGGGTGCCTGGCTATGGAGATTGACCAAGCAAGATCAGGAGCTCCTGATAGCAGGCGTCTTTGAGCCTAGCTGGGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp GCACCCAGGTCCAAGCATCTGTCTCCCTCCTCAAACGATATCAGCTaGACTGATGCCCAGCTGCCTGTCAAGCTTCCTGATAGGAGTCCC +
Preference number: 1 (lower is better)
Translates to: APRSKHLSPSSNDIS*TDAQLPVKLPDRSP
Trigger: GGGACTCCTATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGAGGAGGGAGACAGATGCTTGGACCTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp AAGCCTCTCCCGGTGGCTACTCTTTGTCTTCTTACCCCAGTTCTGTaGAGCTTGCAGAAGCCCTTCTGGGCTTCCACTCCATGCCCCACA +
Preference number: 1 (lower is better)
Translates to: KPLPVATLCLLTPVL*SLQKPFWASTPCPT
Trigger: TGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGGAGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp GGGCCGCATGCCATCTTTCTGCAGTCTACGTTAAGACCACAGCTGTaGGCCTTCTCAAGAAGCCATAGGTATGAATCGGGGGCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: GPHAIFLQSTLRPQL*AFSRSHRYESGAGG
Trigger: CCCTCCTGCCCCCGATTCATACCTATGGCTTCTTGAGAAGGCTCACAGCTGTGGTCTTAACGTAGACTGCAGAAAGATGGCATGCGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp CGGAGCTGGGGAGGTTTGTGTCTAAATGTTTCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCTTATGGGCAATGGCGGTTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: RSWGGLCLNVSMERK*LASWGSYGQWRFLG
Trigger: CCCCAGGAACCGCCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGAAACATTTAGACACAAACCTCCCCAGCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp ATCTGTCTCCCTCCTCAAACGATATCAGCTGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTC +
Preference number: 1 (lower is better)
Translates to: ICLPPQTISAALMPS*LSSFLIGVPGHRLF
Trigger: GAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGAGGAGGGAGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp CAGATCAGTGGCTCCTCTGATTTTCCTGCTCACGAGCAGCACATGTaGCAAGCTCACGGCTCTTGTGCTGGTTGCCTGGAATTTAATTAC +
Preference number: 1 (lower is better)
Translates to: QISGSSDFPAHEQHM*QAHGSCAGCLEFNY
Trigger: GTAATTAAATTCCAGGCAACCAGCACAAGAGCCGTGAGCTTGGCACATGTGCTGCTCGTGAGCAGGAAAATCAGAGGAGCCACTGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp AAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATaGCATCTTTCTGCAGTCTACGTTAAGACCACAGCTGTGAGCCTT +
Preference number: 1 (lower is better)
Translates to: KETCYKTLGEMPGAA*HLSAVYVKTTAVSL
Trigger: AAGGCTCACAGCTGTGGTCTTAACGTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp TGTCCCTATGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATaGCAGGGGCCGCATGCCATCTTTCTGCAGTCTACGTTAAGACCA +
Preference number: 1 (lower is better)
Translates to: CPYGGRRLAIKPLAK*QGPHAIFLQSTLRP
Trigger: TGGTCTTAACGTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp GTTGGAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGACATGAAGATGGGCTGCGTTCAAGGC +
Preference number: 1 (lower is better)
Translates to: VGKNGLDCKHRPSFK*RKTFDDMKMGCVQG
Trigger: GCCTTGAACGCAGCCCATCTTCATGTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp CTGGAAACAGGTCTGCGATCTGCAGGGAAGACTCCAAAGGTAAACTaGGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAT +
Preference number: 1 (lower is better)
Translates to: LETGLRSAGKTPKVN*GFPTTACASCAQLN
Trigger: ATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTTGGAGTCTTCCCTGCAGATCGCAGACCTGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp CAAGCTCACGGCTCTTGTGCTGGTTGCCTGGAATTTAATTACATGTaGAAGTATCAGGTAGGCACATGGACACGTACCATGTGTGCACAC +
Preference number: 1 (lower is better)
Translates to: QAHGSCAGCLEFNYM*KYQVGTWTRTMCAH
Trigger: GTGTGCACACATGGTACGTGTCCATGTGCCTACCTGATACTTTCACATGTAATTAAATTCCAGGCAACCAGCACAAGAGCCGTGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp AGCAAGATGAGGCTTCATTCTTGGAATGCATCTCCACACACAAGGTaGGGGCAACTTGCAAGAACCCAGAGGTTGGAAAGAATGGTCTTG +
Preference number: 1 (lower is better)
Translates to: SKMRLHSWNASPHTR*GQLARTQRLERMVL
Trigger: CAAGACCATTCTTTCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTGTGTGTGGAGATGCATTCCAAGAATGAAGCCTCATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp ACAAAATGGAAAAGTGTGGTCTGCATTACGTGGAAGTGTGTTGTGTaGGATGGGATCTCCTCTCACTTCCACCTCCTGACCTCCCATCTT +
Preference number: 1 (lower is better)
Translates to: TKWKSVVCITWKCVV*DGISSHFHLLTSHL
Trigger: AAGATGGGAGGTCAGGAGGTGGAAGTGAGAGGAGATCCCATCTCACACAACACACTTCCACGTAATGCAGACCACACTTTTCCATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp CCTCTTGCCTCAACTCAACTCCAAGTTGAAGTCCATCCAGCCTTGTaGACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGC +
Preference number: 1 (lower is better)
Translates to: PLASTQLQVEVHPAL*TFFTNTYREDYLLC
Trigger: GCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTGAGGCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp GCTTCATTCTTGGAATGCATCTCCACACACAAGGTGAGGGCAACTTaGAAGAACCCAGAGGTTGGAAAGAATGGTCTTGACTGCAAACAT +
Preference number: 1 (lower is better)
Translates to: ASFLECISTHKVRAT*KNPEVGKNGLDCKH
Trigger: ATGTTTGCAGTCAAGACCATTCTTTCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTGTGTGTGGAGATGCATTCCAAGAATGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp GTGACTAATATCCAGAAATCCTCTTGCCTCAACTCAACTCCAAGTTaGAGTCCATCCAGCCTTGTGCACGTTCTTCACCAATACGTACAG +
Preference number: 1 (lower is better)
Translates to: VTNIQKSSCLNSTPS*SPSSLVHVLHQYVQ
Trigger: CTGTACGTATTGGTGAAGAACGTGCACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGATATTAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp CTTAGTATCGCTCCCTTGGAAAGTGATCTGGCCAACTGGACATGTTaGAGTATTTCCCCATCTAACACTATCGTAGTGCTAGTGCAAATC +
Preference number: 1 (lower is better)
Translates to: LSIAPLESDLANWTC*SISPSNTIVVLVQI
Trigger: GATTTGCACTAGCACTACGATAGTGTTAGATGGGGAAATACTGCAACATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp GACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATaGTTTGGCCGCTGTAAGACACTGAAATTGCCTTGTTCATGTAGA +
Preference number: 1 (lower is better)
Translates to: DAYGDLLSPISFFTS*FGRCKTLKLPCSCR
Trigger: TCTACATGAACAAGGCAATTTCAGTGTCTTACAGCGGCCAAACCATGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp TTCTCTTCTGGTGAGGGAAGAGAGGATTGTGAAAATATTTCTCCTTaGAGCATCAGCATGTCTCAGATCAAAATCTTGACCCGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: FSSGEGREDCENISP*SISMSQIKILTRGL
Trigger: GAGGCCTCGGGTCAAGATTTTGATCTGAGACATGCTGATGCTTCAAGGAGAAATATTTTCACAATCCTCTCTTCCCTCACCAGAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp CTCCTATCTCATTCTTCACGTCATGGTTTGGCCGCTGTAAGACACTaGAATTGCCTTGTTCATGTAGAAATTTCTCTTTTGGCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: LLSHSSRHGLAAVRH*NCLVHVEISLLAGH
Trigger: GTGCCCAGCCAAAAGAGAAATTTCTACATGAACAAGGCAATTTCAGTGTCTTACAGCGGCCAAACCATGACGTGAAGAATGAGATAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp ACTGCAAGACCATGTGATACCAGTGAGAAAATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCAACTGCTGCTATTTCAAAGAACCCT +
Preference number: 1 (lower is better)
Translates to: TARPCDTSEKICSTL*QSVSVSTAAISKNP
Trigger: AGGGTTCTTTGAAATAGCAGCAGTTGAAACAGAGACACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGTATCACATGGTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp ATCAAAATCTTGACCCGAGGCCTCAGCATTTTTCTTGCAGATGGGTaGCTAATATCCAGAAATCCTCTTGCCTCAACTCAACTCCAAGTT +
Preference number: 1 (lower is better)
Translates to: IKILTRGLSIFLADG*LISRNPLASTQLQV
Trigger: AACTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGATATTAGTCACCCATCTGCAAGAAAAATGCTGAGGCCTCGGGTCAAGATTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 90 bp TTAAGAGAGCTTCTTGCTCTTCTGTGGCCAATTTCTTCACTCTCCTaGCACTTTGAAGTAACCACTCAACTCCACAGACTTCTTGTTGAG +
Preference number: 1 (lower is better)
Translates to: LRELLALLWPISSLS*HFEVTTQLHRLLVE
Trigger: CTCAACAAGAAGTCTGTGGAGTTGAGTGGTTACTTCAAAGTGTCAGGAGAGTGAAGAAATTGGCCACAGAAGAGCAAGAAGCTCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp TTACATGTGAAAGTATCAGGTAGGCACATGGACACGTACCATGTGTaGACACACATGTACACACACACATTTTGGGTCCTCCTTATAACT +
Preference number: 1 (lower is better)
Translates to: LHVKVSGRHMDTYHV*THMYTHTFWVLLIT
Trigger: AGTTATAAGGAGGACCCAAAATGTGTGTGTGTACATGTGTGTGCACACATGGTACGTGTCCATGTGCCTACCTGATACTTTCACATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp GCAAGACTTTGTGCAAAACGATTTAAGTGGAAACGTGAAAATGTGTaGTGCTATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATC +
Preference number: 1 (lower is better)
Translates to: ARLCAKRFKWKRENV*CYIRDAYGDLLSPI
Trigger: GATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATAGCAGCACACATTTTCACGTTTCCACTTAAATCGTTTTGCACAAAGTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 90 bp AGACTTTGTGCAAAACGATTTAAGTGGAAACGTGAAAATGTGTGCTaGTATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCA +
Preference number: 1 (lower is better)
Translates to: RLCAKRFKWKRENVC*YIRDAYGDLLSPIS
Trigger: TGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATAGCAGCACACATTTTCACGTTTCCACTTAAATCGTTTTGCACAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 90 bp TCATCTCATCTGAGCGAAGCAAGACTTTGTGCAAAACGATTTAAGTaGAAACGTGAAAATGTGTGCTGCTATATCAGGGACGCTTATGGT +
Preference number: 1 (lower is better)
Translates to: SSHLSEARLCAKRFK*KRENVCCYIRDAYG
Trigger: ACCATAAGCGTCCCTGATATAGCAGCACACATTTTCACGTTTCCACTTAAATCGTTTTGCACAAAGTCTTGCTTCGCTCAGATGAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCTCGGGGGCAGGAGGGTaGCCAGGGCAGAAACGTCTC +
Preference number: 2 (lower is better)
Translates to: WRKETCYKTLGEMPGAACSGAGG*PGQKRL
Trigger: GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGA...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCGGCAATGGCGGTTCCTaGGGTGCCCAGATCCCCTCG +
Preference number: 2 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFGNGGS*GAQIPS
Trigger: CGAGGGGATCTGGGCACCCCAGGAACCGCCATTGCC...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp CTCCCGGTGGCTACTCTTTGTCTTCTTACCCCAGTTCTGTGCAGCTaGCAGAAGCCCTTCTGGGCTTCCACTCCATGCCCCACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LPVATLCLLTPVLCS*QKPFWASTPCPTGL
Trigger: CAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCCTGGCCACACTAGCTaGTCAGCACTGTGTACGCAC +
Preference number: 2 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLPGHTS*SALCTH
Trigger: GTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCCTGCTCCCTGGCACTTaGGAGGAGAAATCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: HQALATLAGQHCVRTSEILLPGT*EEKSFL
Trigger: AAGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAG...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCAAGGTGGAGAAGAGATaGGCAGTGCCTCTACCCCAG +
Preference number: 2 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLKVEKR*AVPLPQ
Trigger: CTGGGGTAGAGGCACTGCCCATCTCTTCTCCACCTT...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGAC +
Preference number: 2 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLRPSFK*RKTFDD
Trigger: GTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTTCCTGGGGGTCTTATaGGCAATGGCGGTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFFLGVL*AMAVPG
Trigger: CCCAGGAACCGCCATTGCCCATAAGACCCCCAGGAA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTGGCTTGGCCGGAGCTaGGGAGGTTTGTGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLWLGRS*GGLCLN
Trigger: ATTTAGACACAAACCTCCCCAGCTCCGGCCAAGCCA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp TGGTGCTGCTGTCCCTATGGAGGAAGGAGACTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCGCATGCCATCTTTCTGCAGTCTACG +
Preference number: 2 (lower is better)
Translates to: WCCCPYGGRRLAIKP*AKCQGPHAIFLQST
Trigger: CGTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGGGTCTTATGGGCAATaGCGGTTCCTGGGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: ERMVLTANIAPASSAGRPGSYGQ*RFLGCP
Trigger: TGGGCACCCCAGGAACCGCCATTGCCCATAAGACCC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTAGACAGACGTGTGGCTaGTCCCTGGCACTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: ERMVLTANIAPASSAGRPRQTCG*SLALER
Trigger: CCTCTCAAGTGCCAGGGAGCAGCCACACGTCTGTCT...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCGGGGGCAGGAGGGTaGCCAGGGCAGAAACGTCTC +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFSGAGG*PGQKRL
Trigger: GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGA...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTGGGTCTTATGGGCAATaGCGGTTCCTGGGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIGSYGQ*RFLGCP
Trigger: TGGGCACCCCAGGAACCGCCATTGCCCATAAGACCC...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp TCTTTCCCAGCTGTAACAAAGGAAGCCTCTCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCTGTGCAGCTTGCAGAAGCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: SFPAVTKEASPGGYS*SSYPSSVQLAEALL
Trigger: CAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGGAGAGGCTTCCTTTGTTACAGCTGGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATGGCGGTTCCTGGGGTaGCCAGATCCCCTCGTTCTC +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSWRFLG*PDPLVL
Trigger: GAGAACGAGGGGATCTGGGCACCCCAGGAACCGCCA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGATCACATAGGTGGCTaGTCAGAGGAGCTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHDHIGG*SEELRR
Trigger: TCTCCTCAGCTCCTCTGAGCAGCCACCTATGTGATC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAAACCCTTGGCGAAATaGCAGGGGCCGCATGCCATC +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIKPLAK*QGPHAI
Trigger: GATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACGTGTGGCTGCTCCCTaGCACTTGAGAGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRRVAAP*HLRGEI
Trigger: GATTTCTCCTCTCAAGTGCCAGGGAGCAGCCACACG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCCTGGCCACACTAGCTaGTCAGCACTGTGTACGCAC +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIPGHTS*SALCTH
Trigger: GTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCAACCTGAAACTTCCTaGCCACCAGGCCACCAGGCC +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPQPETS*PPGHQA
Trigger: GGCCTGGTGGCCTGGTGGCCAGGAAGTTTCAGGTTG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCGATATCAGCTGCACTaGTGCCCAGCTGCCTGTCAA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRYQLH*CPAACQ
Trigger: TTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCACGAGCAGCACATGTaGCAAGCTCACGGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIHEQHM*QAHGSC
Trigger: ACAAGAGCCGTGAGCTTGGCACATGTGCTGCTCGTG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGCTCCATCCTCCCCATaGACCTTCACCAGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKAPSSP*TFTRWP
Trigger: AGGCCACCTGGTGAAGGTGCATGGGGAGGATGGAGC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGCTCCATCCTCCCCATaGACCTTCACCAGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFAPSSP*TFTRWP
Trigger: AGGCCACCTGGTGAAGGTGCATGGGGAGGATGGAGC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGATCACATAGGTGGCTaGTCAGAGGAGCTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRDHIGG*SEELRR
Trigger: TCTCCTCAGCTCCTCTGAGCAGCCACCTATGTGATC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATA +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRALMPS*LSSFLI
Trigger: TATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCCACAGGGCTGGTGCTaGTGTCCCTATGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSPQGWC*CPYGGR
Trigger: CCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATAGACAGGCTGTCAGCTaGGTACAGAGAAACACACAG +
Preference number: 2 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHRQAVS*VQRNTQ
Trigger: CTGTGTGTTTCTCTGTACCCAGCTGACAGCCTGTCT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATGGAAAGAATGGTCTTaGCTGCAAACATCGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRWKEWS*LQTSPQ
Trigger: CTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTGGCGGTTCCTGGGGTaGCCAGATCCCCTCGTTCTC +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVWRFLG*PDPLVL
Trigger: GAGAACGAGGGGATCTGGGCACCCCAGGAACCGCCA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATTCTTTCCATCAGACTTaGCGCAAGGTTATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHSFHQT*RKVMWL
Trigger: CAGCCACATAACCTTGCGGCAAGTCTGATGGAAAGA...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGACATGAAGATGGGCTaGGTTCAAGGCACCTGTCAT +
Preference number: 2 (lower is better)
Translates to: ERMVLTANIAPASSAGRPDMKMG*VQGTCH
Trigger: ATGACAGGTGCCTTGAACGCAGCCCATCTTCATGTC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAGGCTCAAAGACGCCTaGTATCAGGAGCTCCTGATC +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRLKDA*YQELLI
Trigger: GATCAGGAGCTCCTGATAGCAGGCGTCTTTGAGCCT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCTTGTGCTGGTTGCCTaGAATTTAATTACATGTGAA +
Preference number: 2 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLLVLVA*NLITCE
Trigger: TTCACATGTAATTAAATTCCAGGCAACCAGCACAAG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCGTGTGGCTGCTCCCTaGCACTTGAGAGGAGAAATC +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPRVAAP*HLRGEI
Trigger: GATTTCTCCTCTCAAGTGCCAGGGAGCAGCCACACG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp TGCCTGTCAAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTaGCCCTTTTCTCCCATTGGGGTTGGATTTAAAGATCACATAGGT +
Preference number: 2 (lower is better)
Translates to: CLSSFLIGVPGHRLF*PFSPIGVGFKDHIG
Trigger: ACCTATGTGATCTTTAAATCCAACCCCAATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTTGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTGCTCCAGGTAGCAAATaGTGGCTTGGCCGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVAPGSK*WLGRSW
Trigger: CCAGCTCCGGCCAAGCCATCATTTGCTACCTGGAGC...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAAACAACCCAAATGGTaGACCTGGAGAACCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRKQPKW*TWRTLF
Trigger: GAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCACGATATCAGCTGCACTaGTGCCCAGCTGCCTGTCAA +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSRYQLH*CPAACQ
Trigger: TTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCG...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTTAGGACGTGAGAAATaGCCTCTCAAGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFILGREK*PLKRAG
Trigger: TCCTGCCCTCTTGAGAGGTCATTTCTCACGTCCTAA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAAGAATGGTCTTGACTaGAAACATCGCCCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRKNGLD*KHRPSF
Trigger: GAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTCAAACGATATCAGCTaGACTGATGCCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFISNDIS*TDAQLP
Trigger: AGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGGCAATGGCGGTTCCTaGGGTGCCCAGATCCCCTCG +
Preference number: 2 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEGNGGS*GAQIPS
Trigger: CGAGGGGATCTGGGCACCCCAGGAACCGCCATTGCC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCAAGTGCCTAGCTTCCTaGGGGTCTTATGGGCAATGG +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPKCLAS*GSYGQW
Trigger: CCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAGACAGGCTGTCAGCTaGGTACAGAGAAACACACAG +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRQAVS*VQRNTQ
Trigger: CTGTGTGTTTCTCTGTACCCAGCTGACAGCCTGTCT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCATGCCCCACAGGGCTaGTGCTGCTGTCCCTATGGA +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLHAPQG*CCCPYG
Trigger: TCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGATCAGTGGCTCCTCTaGTTTTCCTGCTCACGAGCA +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFDQWLL*FSCSRA
Trigger: TGCTCGTGAGCAGGAAAATCAGAGGAGCCACTGATC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGATCAGTGGCTCCTCTaGTTTTCCTGCTCACGAGCA +
Preference number: 2 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLDQWLL*FSCSRA
Trigger: TGCTCGTGAGCAGGAAAATCAGAGGAGCCACTGATC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACATTTCCCTTCAACCTaGAACTTCCTGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKHFPST*NFLATR
Trigger: CCTGGTGGCCAGGAAGTTTCAGGTTGAAGGGAAATG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCTCAGATCAAAATCTTaGCCCGAGGCCTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFILRSKS*PEASAF
Trigger: AAATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTCTTTCCATCAGACTTaGCGCAAGGTTATGTGGCTG +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFISFHQT*RKVMWL
Trigger: CAGCCACATAACCTTGCGGCAAGTCTGATGGAAAGA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCAAGGTGAGGGCAACTTaGAAGAACCCAGAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPKVRAT*KNPEVG
Trigger: TCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGGCACAGACTGTTCTTaGCCTTTTCTCCCATTGGGG +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKGTDCS*PFLPLG
Trigger: CCCCAATGGGAGAAAAGGGCAAGAACAGTCTGTGCC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGGCACAGACTGTTCTTaGCCTTTTCTCCCATTGGGG +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFGTDCS*PFLPLG
Trigger: CCCCAATGGGAGAAAAGGGCAAGAACAGTCTGTGCC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTCAACTGCCCAGCTCTaGAAACATTCTGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFISTAQL*KHSVER
Trigger: TCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTAAGTGCCTAGCTTCCTaGGGGTCTTATGGGCAATGG +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFKCLAS*GSYGQW
Trigger: CCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTT...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCCATGGAGGCAGAGATaGAGGCAGAATCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSPWRQR*RQNPLF
Trigger: GAAGAGTGGATTCTGCCTCCATCTCTGCCTCCATGG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGCTCCAGGTAGCAAATaGTGGCTTGGCCGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLAPGSK*WLGRSW
Trigger: CCAGCTCCGGCCAAGCCATCATTTGCTACCTGGAGC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKSMERK*LASWGS
Trigger: AGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFSMERK*LASWGS
Trigger: AGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGA...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAAGGTGAGGGCAACTTaGAAGAACCCAGAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSKVRAT*KNPEVG
Trigger: TCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTGGAGGAAGGAGACTTaGTATAAAACCCTTGGCGAA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIWRKET*YKTLGE
Trigger: TTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACAGTGTAAAAATACGTaGGCTTATTGCATCTACCCC +
Preference number: 2 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRQCKNT*AYCIYP
Trigger: GGGGTAGATGCAATAAGCCCACGTATTTTTACACTG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGCTCCTGATCTTGCTTaGTCAATCTCCATAGCCAGG +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSAPDLA*SISIAR
Trigger: CCTGGCTATGGAGATTGACCAAGCAAGATCAGGAGC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGAAGTCCACCTTCCTTTaGAGGCACCAACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLKSTFL*RHQPGA
Trigger: AGCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAGTGATCTGGCCAACTaGACATGTTGCAGTATTTCC +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFISDLAN*TCCSIS
Trigger: GGAAATACTGCAACATGTCCAGTTGGCCAGATCACT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGTGTGTTGTGTGAGATaGGATCTCCTCTCACTTCCA +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPVCCVR*DLLSLP
Trigger: TGGAAGTGAGAGGAGATCCCATCTCACACAACACAC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp AATCCTCTTGCCTCAACTCAACTCCAAGTTGAAGTCCATCCAGCCTaGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTG +
Preference number: 2 (lower is better)
Translates to: NPLASTQLQVEVHPA*CTFFTNTYREDYLL
Trigger: CAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTGAGGCAAGAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTCTCCACACACAAGGTaGGGGCAACTTGCAAGAACC +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVSPHTR*GQLART
Trigger: GGTTCTTGCAAGTTGCCCTCACCTTGTGTGTGGAGA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGCCTAAAGAGCTTCCCTaGACCCCACACTCAGTAGCA +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEEPKELP*TPHSVA
Trigger: TGCTACTGAGTGTGGGGTTCAGGGAAGCTCTTTAGG...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACAGGTTCTTAGGACGTaGGAAATGACCTCTCAAGAG +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKQVLRT*EMTSQE
Trigger: CTCTTGAGAGGTCATTTCTCACGTCCTAAGAACCTG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTATATCTCATCTCATCTaGGCGAAGCAAGACTTTGTG +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIISHLI*AKQDFV
Trigger: CACAAAGTCTTGCTTCGCTCAGATGAGATGAGATAT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCAGACAGACGTGTGGCTaGTCCCTGGCACTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLRQTCG*SLALER
Trigger: CCTCTCAAGTGCCAGGGAGCAGCCACACGTCTGTCT...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATA +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEEALMPS*LSSFLI
Trigger: TATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGC...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGCTTACCCCAGTTCTGTaGAGCTTGCAGAAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEELTPVL*SLQKPF
Trigger: GAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAG...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCACCAGTGAGAAAATCTaGTCCACACTGTGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPTSEKI*STLWQS
Trigger: ACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTGGCTTGGCCGGAGCTaGGGAGGTTTGTGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVWLGRS*GGLCLN
Trigger: ATTTAGACACAAACCTCCCCAGCTCCGGCCAAGCCA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCTTGCAGAAGCCCTTCTaGGCTTCCACTCCATGCCCC +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLLQKPF*ASTPCP
Trigger: GGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAA...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp ATCTCATTCTTCACGTCATGGTTTGGCCGCTGTAAGACACTGAAATaGCCTTGTTCATGTAGAAATTTCTCTTTTGGCTGGGCACAGTGG +
Preference number: 2 (lower is better)
Translates to: ISFFTSWFGRCKTLK*PCSCRNFSFGWAQW
Trigger: CCACTGTGCCCAGCCAAAAGAGAAATTTCTACATGAACAAGGCAATTTCAGTGTCTTACAGCGGCCAAACCATGACGTGAAGAATGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTGAGATCTTTGTTTCTTaGGACATTTCCTTCCACTCA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIEIFVS*DISFHS
Trigger: TGAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTC...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCGCTCCCTTGGAAAGTaGTCTGGCCAACTGGACATG +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLRSLGK*SGQLDM
Trigger: CATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTTAGGACGTGAGAAATaGCCTCTCAAGAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLGREK*PLKRAG
Trigger: TCCTGCCCTCTTGAGAGGTCATTTCTCACGTCCTAA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGACATGAAGATGGGCTaGGTTCAAGGCACCTGTCAT +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLDMKMG*VQGTCH
Trigger: ATGACAGGTGCCTTGAACGCAGCCCATCTTCATGTC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAACTCAGGAGGTGTTTaGATTCACAGAACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFINSGGV*IHRTVL
Trigger: AAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGCCAACTGGACATGTTaGAGTATTTCCCCATCTAAC +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFANWTC*SISPSN
Trigger: GTTAGATGGGGAAATACTGCAACATGTCCAGTTGGC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGCCAACTGGACATGTTaGAGTATTTCCCCATCTAAC +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSANWTC*SISPSN
Trigger: GTTAGATGGGGAAATACTGCAACATGTCCAGTTGGC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAGTGATCTGGCCAACTaGACATGTTGCAGTATTTCC +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSSDLAN*TCCSIS
Trigger: GGAAATACTGCAACATGTCCAGTTGGCCAGATCACT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGAGGGCAGGACAAAATaGAAAAGTGTGGTCTGCATT +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKEGRTK*KSVVCI
Trigger: AATGCAGACCACACTTTTCCATTTTGTCCTGCCCTC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSICSTL*QSVSVS
Trigger: TGAAACAGAGACACTTTGCCACAGTGTGGAGCAGAT...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCCCAACCCTATAAACTaGTCTTTTGTCCTTTACACA +
Preference number: 2 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIPNPIN*SFVLYT
Trigger: TGTGTAAAGGACAAAAGACCAGTTTATAGGGTTGGG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGAAACAACCCAAATGGTaGACCTGGAGAACCCTCTTC +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLKQPKW*TWRTLF
Trigger: GAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTTAAGACCACAGCTGTaGGCCTTCTCAAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLRPQL*AFSRSH
Trigger: ATGGCTTCTTGAGAAGGCTCACAGCTGTGGTCTTAA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGAACTCAACTCCAAGTTaGAGTCCATCCAGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLNSTPS*SPSSLV
Trigger: CACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGAATACGTGGGCTTATTaGATCTACCCCACGGATGGT +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEENTWAY*IYPTDG
Trigger: ACCATCCGTGGGGTAGATGCAATAAGCCCACGTATT...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGAC +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLRPSFK*RKTFDD
Trigger: GTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTCAACTGCCCAGCTCTaGAAACATTCTGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVSTAQL*KHSVER
Trigger: TCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTGGAAAAGTGTGGTCTaGATTACGTGGAAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSWKSVV*ITWKCV
Trigger: AACACACTTCCACGTAATGCAGACCACACTTTTCCA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCACTTAAGAGAGCTTCTTaGTCTTCTGTGGCCAATTTC +
Preference number: 2 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSLKRAS*SSVANF
Trigger: GAAATTGGCCACAGAAGAGCAAGAAGCTCTCTTAAG...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTATCAGGTAGGCACATaGACACGTACCATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEEYQVGT*TRTMCA
Trigger: TGCACACATGGTACGTGTCCATGTGCCTACCTGATA...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCCTTGGAAAGTGATCTaGCCAACTGGACATGTTGCA +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLPWKVI*PTGHVA
Trigger: TGCAACATGTCCAGTTGGCCAGATCACTTTCCAAGG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTGTGTGTTGTGTGAGATaGGATCTCCTCTCACTTCCA +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVVCCVR*DLLSLP
Trigger: TGGAAGTGAGAGGAGATCCCATCTCACACAACACAC...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTGAGATCTTTGTTTCTTaGGACATTTCCTTCCACTCA +
Preference number: 2 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSEIFVS*DISFHS
Trigger: TGAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTC...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAATGGAAAGAATGGTCTTaGCTGCAAACATCGCCCCAG +
Preference number: 2 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEWKEWS*LQTSPQ
Trigger: CTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCA...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCACTCAGTAGCAAGATaGGGCTTCATTCTTGGAATG +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVHSVAR*GFILGM
Trigger: CATTCCAAGAATGAAGCCTCATCTTGCTACTGAGTG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGCTATCAGGAGCTCCTaGTCTTGCTTGGTCAATCTC +
Preference number: 2 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEAIRSS*SCLVNL
Trigger: GAGATTGACCAAGCAAGATCAGGAGCTCCTGATAGC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCTGGAAGTGTGTTGTGTaGGATGGGATCTCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLWKCVV*DGISSH
Trigger: GTGAGAGGAGATCCCATCTCACACAACACACTTCCA...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCTCAAACGATATCAGCTaGACTGATGCCCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLSNDIS*TDAQLP
Trigger: AGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGA...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATGTCTCTGTTTCAACTaGTGCTATTTCAAAGAACCC +
Preference number: 2 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKCLCFN*CYFKEP
Trigger: GGGTTCTTTGAAATAGCAGCAGTTGAAACAGAGACA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTTAGTATCGCTCCCTTaGAAAGTGATCTGGCCAACT +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLVSLP*KVIWPT
Trigger: AGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCAAAATGGAAAAGTGTaGTCTGCATTACGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFQNGKV*SALRGS
Trigger: ACTTCCACGTAATGCAGACCACACTTTTCCATTTTG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp GAAGTTCTCCAAATCATTTTCTCAATTGCAAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCTTTCCCAGCTGTAACAAAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: EVLQIIFSIAKLRRC*HSQNCSFPAVTKEA
Trigger: GGCTTCCTTTGTTACAGCTGGGAAAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTTTGCAATTGAGAAAATGATTTGGAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCCATCTTTAAAAAGCTaGGTCTGCCTTAGTATCGCT +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVPSLKS*VCLSIA
Trigger: AGCGATACTAAGGCAGACTCAGCTTTTTAAAGATGG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGATCCAGAAATCCTCTTaGCTCAACTCAACTCCAAGT +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLIQKSS*LNSTPS
Trigger: ACTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGAT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCTATCAGGTAGGCACATaGACACGTACCATGTGTGCA +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLYQVGT*TRTMCA
Trigger: TGCACACATGGTACGTGTCCATGTGCCTACCTGATA...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGCAGTGTAAAAATACGTaGGCTTATTGCATCTACCCC +
Preference number: 2 (lower is better)
Translates to: NFRFIARNYINSHKSVEEQCKNT*AYCIYP
Trigger: GGGGTAGATGCAATAAGCCCACGTATTTTTACACTG...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCACCAGTGAGAAAATCTaGTCCACACTGTGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLTSEKI*STLWQS
Trigger: ACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGT...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCAAAATGGAAAAGTGTaGTCTGCATTACGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVQNGKV*SALRGS
Trigger: ACTTCCACGTAATGCAGACCACACTTTTCCATTTTG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLICSTL*QSVSVS
Trigger: TGAAACAGAGACACTTTGCCACAGTGTGGAGCAGAT...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCCCAACCCTATAAACTaGTCTTTTGTCCTTTACACA +
Preference number: 2 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLPNPIN*SFVLYT
Trigger: TGTGTAAAGGACAAAAGACCAGTTTATAGGGTTGGG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAAACTCAGGAGGTGTTTaGATTCACAGAACTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SNTIVVLVQIKENSYKPENSGGV*IHRTVL
Trigger: AAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 90 bp GAATCCACTCTTCACAGGTTTCCACATAGAACATCACATATGTCTTaGTCATTTAAAACAATCAACGTTTCCAGTGTAAAAATACGTGGG +
Preference number: 2 (lower is better)
Translates to: ESTLHRFPHRTSHMS*SFKTINVSSVKIRG
Trigger: CCCACGTATTTTTACACTGGAAACGTTGATTGTTTTAAATGACAAAGACATATGTGATGTTCTATGTGGAAACCTGTGAAGAGTGGATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCTTGTGCTGGTTGCCTaGAATTTAATTACATGTGAA +
Preference number: 2 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLLVLVA*NLITCE
Trigger: TTCACATGTAATTAAATTCCAGGCAACCAGCACAAG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp CTGGCCACCAGGCCACCAGGCCCTGGCCACACTAGCTaGTCAGCACTGTGTACGCACCAGCGAGATCTTTGT +
Preference number: 3 (lower is better)
Translates to: LATRPPGPGHTS*SALCTHQRDLC
Trigger: ACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTGGCCTGGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp AGCCCTTCTGGGCTTCCACTCCATGCCCCACAGGGCTaGTGCTGCTGTCCCTATGGAGGAAGGAGACTTGCT +
Preference number: 3 (lower is better)
Translates to: SPSGLPLHAPQG*CCCPYGGRRLA
Trigger: AGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp GGGCTGGTGCTGCTGTCCCTATGGAGGAAGGAGACTTaGTATAAAACCCTTGGCGAAATGCCAGGGGCCGCA +
Preference number: 3 (lower is better)
Translates to: GLVLLSLWRKET*YKTLGEMPGAA
Trigger: TGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCAAAGTCCACCTTCCTTaGGAGGCACCAACCAGGGGC +
Preference number: 3 (lower is better)
Translates to: WRKETCYKTLGEMPGAACKVHLP*EAPTRG
Trigger: GCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTTT...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp GGCTCCTCTGATTTTCCTGCTCACGAGCAGCACATGTaGCAAGCTCACGGCTCTTGTGCTGGTTGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: GSSDFPAHEQHM*QAHGSCAGCLE
Trigger: TTCCAGGCAACCAGCACAAGAGCCGTGAGCTTGGCACATGTGCTGCTCGTGAGCAGGAAAATCAGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp CCTCCTCAAACGATATCAGCTGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATAGGAGTCCCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: PPQTISAALMPS*LSSFLIGVPGH
Trigger: GTGCCCTGGGACTCCTATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp TCTGGGCTTCCACTCCATGCCCCACAGGGCTGGTGCTaGTGTCCCTATGGAGGAAGGAGACTTGCTATAAAA +
Preference number: 3 (lower is better)
Translates to: SGLPLHAPQGWC*CPYGGRRLAIK
Trigger: TTTTATAGCAAGTCTCCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATGGAGTGGAAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp CAAAGACGCCTGCTATCAGGAGCTCCTGATCTTGCTTaGTCAATCTCCATAGCCAGGCACCCAGGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: QRRLLSGAPDLA*SISIARHPGPS
Trigger: GCTTGGACCTGGGTGCCTGGCTATGGAGATTGACCAAGCAAGATCAGGAGCTCCTGATAGCAGGCGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp CCCATTGGGGTTGGATTTAAAGATCACATAGGTGGCTaGTCAGAGGAGCTGAGGAGAAGCTCCATCCTCCCC +
Preference number: 3 (lower is better)
Translates to: PIGVGFKDHIGG*SEELRRSSILP
Trigger: GGGGAGGATGGAGCTTCTCCTCAGCTCCTCTGAGCAGCCACCTATGTGATCTTTAAATCCAACCCCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp GGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATaGCAGGGGCCGCATGCCATCTTTCTGCAGTCTACG +
Preference number: 3 (lower is better)
Translates to: GGRRLAIKPLAK*QGPHAIFLQST
Trigger: CGTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTGCCCTTTTCTCCCATaGGGGTTGGATTTAAAGATC +
Preference number: 3 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLCPFLP*GLDLKI
Trigger: GATCTTTAAATCCAACCCCAATGGGAGAAAAGGGCA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GGTCTGCGATCTGCAGGGAAGACTCCAAAGGTAAACTaGGGGTTTCCCACCACAGCTTGTGCATCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: GLRSAGKTPKVN*GFPTTACASCA
Trigger: AGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTTGGAGTCTTCCCTGCAGATCGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp TCCAAGCATCTGTCTCCCTCCTCAAACGATATCAGCTaGACTGATGCCCAGCTGCCTGTCAAGCTTCCTGAT +
Preference number: 3 (lower is better)
Translates to: SKHLSPSSNDIS*TDAQLPVKLPD
Trigger: ATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGAGGAGGGAGACAGATGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTGTAGCAAATGATGGCTaGGCCGGAGCTGGGGAGGTT +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIVANDG*AGAGEV
Trigger: AACCTCCCCAGCTCCGGCCAAGCCATCATTTGCTAC...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAAAGTCCACCTTCCTTaGGAGGCACCAACCAGGGGC +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIKVHLP*EAPTRG
Trigger: GCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTTT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCCAAGCTCACGGCTCTaGTGCTGGTTGCCTGGAATT +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIPSSRL*CWLPGI
Trigger: AATTCCAGGCAACCAGCACAAGAGCCGTGAGCTTGG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp TGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATaGCATCTTTCTGCAGTCTACGTTAAGACCACAGCT +
Preference number: 3 (lower is better)
Translates to: CYKTLGEMPGAA*HLSAVYVKTTA
Trigger: AGCTGTGGTCTTAACGTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTGCTGCTCCCTGGCACTaGAGAGGAGAAATCTTTCCT +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIAAPWH*RGEIFP
Trigger: AGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAGC...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIPGGYS*SSYPSS
Trigger: AGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GCCATCTTTCTGCAGTCTACGTTAAGACCACAGCTGTaGGCCTTCTCAAGAAGCCATAGGTATGAATCGGGG +
Preference number: 3 (lower is better)
Translates to: AIFLQSTLRPQL*AFSRSHRYESG
Trigger: CCCCGATTCATACCTATGGCTTCTTGAGAAGGCTCACAGCTGTGGTCTTAACGTAGACTGCAGAAAGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp AAAAGTGTGGTCTGCATTACGTGGAAGTGTGTTGTGTaGGATGGGATCTCCTCTCACTTCCACCTCCTGACC +
Preference number: 3 (lower is better)
Translates to: KSVVCITWKCVV*DGISSHFHLLT
Trigger: GGTCAGGAGGTGGAAGTGAGAGGAGATCCCATCTCACACAACACACTTCCACGTAATGCAGACCACACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp GGAGGTTTGTGTCTAAATGTTTCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCTTATGGGCAATGGCGG +
Preference number: 3 (lower is better)
Translates to: GGLCLNVSMERK*LASWGSYGQWR
Trigger: CCGCCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGAAACATTTAGACACAAACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp AATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGACATGAAGATGGGCTGC +
Preference number: 3 (lower is better)
Translates to: NGLDCKHRPSFK*RKTFDDMKMGC
Trigger: GCAGCCCATCTTCATGTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCACTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCG +
Preference number: 3 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSLAIKP*AKCQGP
Trigger: CGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAG...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCG +
Preference number: 3 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSLAIKP*AKCQGP
Trigger: CGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp AACTTGCAAGAACCCAGAGGTTGGAAAGAATGGTCTTaGCTGCAAACATCGCCCCAGCTTCAAGTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: NLQEPRGWKEWS*LQTSPQLQVQE
Trigger: TTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAACCTCTGGGTTCTTGCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp AGGCTTCATTCTTGGAATGCATCTCCACACACAAGGTaGGGGCAACTTGCAAGAACCCAGAGGTTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: RLHSWNASPHTR*GQLARTQRLER
Trigger: TCTTTCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTGTGTGTGGAGATGCATTCCAAGAATGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp GAGTCTGCCTTAGTATCGCTCCCTTGGAAAGTGATCTaGCCAACTGGACATGTTGCAGTATTTCCCCATCTA +
Preference number: 3 (lower is better)
Translates to: ESALVSLPWKVI*PTGHVAVFPHL
Trigger: TAGATGGGGAAATACTGCAACATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAGGCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTGTAGCAAATGATGGCTaGGCCGGAGCTGGGGAGGTT +
Preference number: 3 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVVANDG*AGAGEV
Trigger: AACCTCCCCAGCTCCGGCCAAGCCATCATTTGCTAC...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGCTGCTCCCTGGCACTaGAGAGGAGAAATCTTTCCT +
Preference number: 3 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSAAPWH*RGEIFP
Trigger: AGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAGC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFPGGYS*SSYPSS
Trigger: AGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTCTCAGATCAAAATCTaGACCCGAGGCCTCAGCATT +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFISQIKI*TRGLSI
Trigger: AATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAGA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCGGAGCTGGGGAGGTTaGTGTCTAAATGTTTCCATG +
Preference number: 3 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRSWGG*CLNVSM
Trigger: CATGGAAACATTTAGACACAAACCTCCCCAGCTCCG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCAAGGTGAGGGCAACTaGCAAGAACCCAGAGGTTGG +
Preference number: 3 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVQGEGN*QEPRGW
Trigger: CCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACTTAGTATCGCTCCCTaGGAAAGTGATCTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKLSIAP*ESDLAN
Trigger: GTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp CTCCTTGAAGCATCAGCATGTCTCAGATCAAAATCTTaGCCCGAGGCCTCAGCATTTTTCTTGCAGATGGGT +
Preference number: 3 (lower is better)
Translates to: LLEASACLRSKS*PEASAFFLQMG
Trigger: ACCCATCTGCAAGAAAAATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAGACATGCTGATGCTTCAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp AAAGTATCAGGTAGGCACATGGACACGTACCATGTGTaGACACACATGTACACACACACATTTTGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: KVSGRHMDTYHV*THMYTHTFWVL
Trigger: GAGGACCCAAAATGTGTGTGTGTACATGTGTGTGCACACATGGTACGTGTCCATGTGCCTACCTGATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp GGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATaGTTTGGCCGCTGTAAGACACTGAAATTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: GDLLSPISFFTS*FGRCKTLKLPC
Trigger: ACAAGGCAATTTCAGTGTCTTACAGCGGCCAAACCATGACGTGAAGAATGAGATAGGAGACAGGAGATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCGAGATCTTTGTTTCTaGAGACATTTCCTTCCACTC +
Preference number: 3 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRDLCF*RHFLPL
Trigger: GAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTCG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTTGGAAAGAATGGTCTaGACTGCAAACATCGCCCCA +
Preference number: 3 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSLERMV*TANIAP
Trigger: TGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATTGGAAAGAATGGTCTaGACTGCAAACATCGCCCCA +
Preference number: 3 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKLERMV*TANIAP
Trigger: TGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAGGGAAGACTATCTTTaGTGCTTTTCAGCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSREDYL*CFSASP
Trigger: GGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GGCTCTTGTGCTGGTTGCCTGGAATTTAATTACATGTaGAAGTATCAGGTAGGCACATGGACACGTACCATG +
Preference number: 3 (lower is better)
Translates to: GSCAGCLEFNYM*KYQVGTWTRTM
Trigger: CATGGTACGTGTCCATGTGCCTACCTGATACTTTCACATGTAATTAAATTCCAGGCAACCAGCACAAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp TTGACCCGAGGCCTCAGCATTTTTCTTGCAGATGGGTaGCTAATATCCAGAAATCCTCTTGCCTCAACTCAA +
Preference number: 3 (lower is better)
Translates to: LTRGLSIFLADG*LISRNPLASTQ
Trigger: TTGAGTTGAGGCAAGAGGATTTCTGGATATTAGTCACCCATCTGCAAGAAAAATGCTGAGGCCTCGGGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GGCTCCCTTGCTGAGGCCCTGTCAGATTATGTTAGATaGGTAAACGCATCAGTGTGTAAGTTCAGAACCAAA +
Preference number: 3 (lower is better)
Translates to: GSLAEALSDYVR*VNASVCKFRTK
Trigger: TTTGGTTCTGAACTTACACACTGATGCGTTTACTCATCTAACATAATCTGACAGGGCCTCAGCAAGGGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp TCAACTCAACTCCAAGTTGAAGTCCATCCAGCCTTGTaGACGTTCTTCACCAATACGTACAGGGAAGACTAT +
Preference number: 3 (lower is better)
Translates to: STQLQVEVHPAL*TFFTNTYREDY
Trigger: ATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp CTTAGTATCGCTCCCTTGGAAAGTGATCTGGCCAACTaGACATGTTGCAGTATTTCCCCATCTAACACTATC +
Preference number: 3 (lower is better)
Translates to: LSIAPLESDLAN*TCCSISPSNTI
Trigger: GATAGTGTTAGATGGGGAAATACTGCAACATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCGGAGCTGGGGAGGTTaGTGTCTAAATGTTTCCATG +
Preference number: 3 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLRSWGG*CLNVSM
Trigger: CATGGAAACATTTAGACACAAACCTCCCCAGCTCCG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCT +
Preference number: 3 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPKLRRC*HSQNCS
Trigger: AGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCTTAGTATCGCTCCCTaGGAAAGTGATCTGGCCAAC +
Preference number: 3 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLLSIAP*ESDLAN
Trigger: GTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp CTTCTTGCTCTTCTGTGGCCAATTTCTTCACTCTCCTaGCACTTTGAAGTAACCACTCAACTCCACAGACTT +
Preference number: 3 (lower is better)
Translates to: LLALLWPISSLS*HFEVTTQLHRL
Trigger: AAGTCTGTGGAGTTGAGTGGTTACTTCAAAGTGTCAGGAGAGTGAAGAAATTGGCCACAGAAGAGCAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CCA 72 bp CCATGTGATACCAGTGAGAAAATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCAACTGCTGCTATTTCA +
Preference number: 3 (lower is better)
Translates to: PCDTSEKICSTL*QSVSVSTAAIS
Trigger: TGAAATAGCAGCAGTTGAAACAGAGACACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGTATCACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTTCTTTCCATCAGACTaGCCGCAAGGTTATGTGGCT +
Preference number: 3 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVFFPSD*PQGYVA
Trigger: AGCCACATAACCTTGCGGCAAGTCTGATGGAAAGAA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp GCAAAACGATTTAAGTGGAAACGTGAAAATGTGTGCTaGTATATCAGGGACGCTTATGGTGATCTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: AKRFKWKRENVC*YIRDAYGDLLS
Trigger: AGACAGGAGATCACCATAAGCGTCCCTGATATAGCAGCACACATTTTCACGTTTCCACTTAAATCGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTGCACCAGCGAGATCTTaGTTTCTTGAGACATTTCCT +
Preference number: 3 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVAPARS*FLETFP
Trigger: AGGAAATGTCTCAAGAAACAAAGATCTCGCTGGTGC...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GGTGAGGGAAGAGAGGATTGTGAAAATATTTCTCCTTaGAGCATCAGCATGTCTCAGATCAAAATCTTGACC +
Preference number: 3 (lower is better)
Translates to: GEGREDCENISP*SISMSQIKILT
Trigger: GGTCAAGATTTTGATCTGAGACATGCTGATGCTTCAAGGAGAAATATTTTCACAATCCTCTCTTCCCTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR TCA 72 bp GTAAACGCATCAGTGTGTAAGTTCAGAACCAAACGTTaGATCAAGTCATGTACCATCGCTGAAAGGCAAGTT +
Preference number: 3 (lower is better)
Translates to: VNASVCKFRTKR*IKSCTIAERQV
Trigger: AACTTGCCTTTCAGCGATGGTACATGACTTGATTCAACGTTTGGTTCTGAACTTACACACTGATGCGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCGAGATCTTTGTTTCTaGAGACATTTCCTTCCACTC +
Preference number: 3 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLRDLCF*RHFLPL
Trigger: GAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTCG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGATGAGGCTTCATTCTaGGAATGCATCTCCACACAC +
Preference number: 3 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLDEASF*ECISTH
Trigger: GTGTGTGGAGATGCATTCCAAGAATGAAGCCTCATC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCT +
Preference number: 3 (lower is better)
Translates to: NFRFIARNYINSHKSVEEKLRRC*HSQNCS
Trigger: AGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTT...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR GCA 72 bp ACTGGTCTTTTGTCCTTTACACAATTTCAGGTTCATTaGACGCAATTACATAAACTCCCACAAATCGGTCGA +
Preference number: 3 (lower is better)
Translates to: TGLLSFTQFQVH*TQLHKLPQIGR
Trigger: TCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCTAGTGGTTAGTAGTTaGCTTTGTGGAAATTCTTCT +
Preference number: 3 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLVVSS*LCGNSS
Trigger: AGAAGAATTTCCACAAAGCAAACTACTAACCACTAG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACTAGTGGTTAGTAGTTaGCTTTGTGGAAATTCTTCT +
Preference number: 3 (lower is better)
Translates to: SNTIVVLVQIKENSYKPELVVSS*LCGNSS
Trigger: AGAAGAATTTCCACAAAGCAAACTACTAACCACTAG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCCCACAGGGCTGGTGCTaGTGTCCCTATGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIPQGWC*CPYGGR
Trigger: CCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGG...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGTGGAGCTTGGCATCTaGTCACCCTCCGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLVELGI*SPSGGA
Trigger: TGCCCCGCCGGAGGGTGACCAGATGCCAAGCTCCAC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCAAACCCTTGGCGAAATaGCAGGGGCCGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIKPLAK*QGPHAI
Trigger: GATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGCCCCACAGGGCTGGTaGTGCTGTCCCTATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLAPQGW*CCPYGG
Trigger: TCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTGATGGAGAAGCGGTaGCGTCTGATTCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEILMEKR*RLIRRW
Trigger: CCAGCGGCGAATCAGACGCCACCGCTTCTCCATCAA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCGCCTGGAAACAGGTCTaGGATCTGCAGGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIAWKQV*DLQGRL
Trigger: GAGTCTTCCCTGCAGATCGCAGACCTGTTTCCAGGC...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCGTGGAGCTTGGCATCTaGTCACCCTCCGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFVELGI*SPSGGA
Trigger: TGCCCCGCCGGAGGGTGACCAGATGCCAAGCTCCAC...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGGCCCCTGGAGTCTGTaGAGCTTGGCATCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLGPWSL*SLASGH
Trigger: GTGACCAGATGCCAAGCTCCACAGACTCCAGGGGCC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTTCAGAGTGGTTCCCTaGGCCCCCAGGTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLFRVVP*APRLQP
Trigger: TGGCTGTAACCTGGGGGCTCAGGGAACCACTCTGAA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCATGGAGGGGGTCGAATaGGTTCGTTGTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIMEGVE*VRCHPA
Trigger: TGCAGGATGACAACGAACGCATTCGACCCCCTCCAT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCAGGCTCAAAGACGCCTaGTATCAGGAGCTCCTGATC +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIRLKDA*YQELLI
Trigger: GATCAGGAGCTCCTGATAGCAGGCGTCTTTGAGCCT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCAGGGTCTTATGGGCAATaGCGGTTCCTGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAGSYGQ*RFLGCP
Trigger: TGGGCACCCCAGGAACCGCCATTGCCCATAAGACCC...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCACATGCCCCACAGGGCTaGTGCTGCTGTCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAHAPQG*CCCPYG
Trigger: TCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATG...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCATGCCAGGGGCCGCATaGCATCTTTCTGCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLMPGAA*HLSAVY
Trigger: GTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCAT...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGGCAATGGCGGTTCCTaGGGTGCCCAGATCCCCTCG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHGNGGS*GAQIPS
Trigger: CGAGGGGATCTGGGCACCCCAGGAACCGCCATTGCC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCGTGTGGCTGCTCCCTaGCACTTGAGAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLRVAAP*HLRGEI
Trigger: GATTTCTCCTCTCAAGTGCCAGGGAGCAGCCACACG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCGGAAGCCTCTCCCGGTaGCTACTCTTTGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIGSLSR*LLFVFL
Trigger: TAAGAAGACAAAGAGTAGCCACCGGGAGAGGCTTCC...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGGGCCACGTCGTAGGTaGCTTCCTCCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHGPRRR*LPPPGP
Trigger: AGGACCAGGTGGAGGAAGTCACCTACGACGTGGCCC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCAAGGTTACAGCCAGAGTaGCAGGAGGAGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVARLQPE*QEEEDG
Trigger: TCCATCCTCCTCCTCCTGGCACTCTGGCTGTAACCT...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGCACCCCAACATCACTaGGTGTGCGCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACAPQHH*VCASAV
Trigger: CACAGCTGATGCGCACACGCAGTGATGTTGGGGTGC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCGCACCCCAACATCACTaGGTGTGCGCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFAPQHH*VCASAV
Trigger: CACAGCTGATGCGCACACGCAGTGATGTTGGGGTGC...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCCCAGAGGCGGATGTTaGAGTGAGCTGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFPRGGC*SELRSH
Trigger: GTGGGATCTCAGCTCACTGCAACATCCGCCTCTGGG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTCTCACCACTCGTATaGACCACGTACAAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIFSPLV*TTYKAN
Trigger: GTTTGCCTTGTACGTGGTCCATACGAGTGGTGAGAA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTTGCAGAAGCCCTTCTaGGCTTCCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFLQKPF*ASTPCP
Trigger: GGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGCTATCAGGAGCTCCTaGTCTTGCTTGGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLAIRSS*SCLVNL
Trigger: GAGATTGACCAAGCAAGATCAGGAGCTCCTGATAGC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTTAGGACGTGAGAAATaGCCTCTCAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLLGREK*PLKRAG
Trigger: TCCTGCCCTCTTGAGAGGTCATTTCTCACGTCCTAA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCAAACACTTTGGAGATCTaGTCACATGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVANTLEI*SHGPWR
Trigger: CCTCCAGGGCCCATGTGAGCAGATCTCCAAAGTGTT...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCGCCAACTGGACATGTTaGAGTATTTCCCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIANWTC*SISPSN
Trigger: GTTAGATGGGGAAATACTGCAACATGTCCAGTTGGC...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGCATCTGCAGGCGAATaGGCCGGCGCAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFASAGE*AGAGPR
Trigger: CCTGGGGCCTGCGCCGGCCCATTCGCCTGCAGATGC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTGTGCGCATCAGCTGTaGGGTGTCCTCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPCAHQL*GVLLQG
Trigger: CCCCTGCAGGAGGACACCCCACAGCTGATGCGCACA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGGCTCAGATTGTTGCTaGGGTCTCGGCTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACGSDCC*GLGYLL
Trigger: GAGGAGATAGCCGAGACCCCAGCAACAATCTGAGCC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGCTCCTGATCTTGCTTaGTCAATCTCCATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLAPDLA*SISIAR
Trigger: CCTGGCTATGGAGATTGACCAAGCAAGATCAGGAGC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp GCTACTCTTTGTCTTCTTACCCCAGTTCTGTGCAGCTaGCAGAAGCCCTTCTGGGCTTCCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: ATLCLLTPVLCS*QKPFWASTPCP
Trigger: GGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATCGGGGCATCCACCTCTaGGATCTGAACTTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHRGIHL*DLNFGH
Trigger: GTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCG...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCCCATCTTTAAAAAGCTaGGTCTGCCTTAGTATCGCT +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIPSLKS*VCLSIA
Trigger: AGCGATACTAAGGCAGACTCAGCTTTTTAAAGATGG...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCGTAGACACAGCCTTTaGTCTCCCGAAAAACACGTT +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLRRHSL*SPEKHV
Trigger: AACGTGTTTTTCGGGAGAGCAAAGGCTGTGTCTACG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379400.8
CDS-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCTCTTCTTCCTCCCGGTaGCGGAGCTGTAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACSSSSR*RSCKFW
Trigger: CCAGAATTTACAGCTCCGGCACCGGGAGGAAGAAGA...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGGAGCACGGTGTACTTaGGCATCAGCTTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLGARCT*ASASLL
Trigger: AAGTAAAGAAGCTGATGCGCAAGTACACCGTGCTCC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTGGCGGTTCCTGGGGTaGCCAGATCCCCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIWRFLG*PDPLVL
Trigger: GAGAACGAGGGGATCTGGGCACCCCAGGAACCGCCA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGCTCCATCCTCCCCATaGACCTTCACCAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPAPSSP*TFTRWP
Trigger: AGGCCACCTGGTGAAGGTGCATGGGGAGGATGGAGC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTCGGGGGCAGGAGGGTaGCCAGGGCAGAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPSGAGG*PGQKRL
Trigger: GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCAAACGTGAAAATGTGTaGTGCTATATCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIKRENV*CYIRDA
Trigger: AGCGTCCCTGATATAGCAGCACACATTTTCACGTTT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCAAGTGCCTAGCTTCCTaGGGGTCTTATGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFKCLAS*GSYGQW
Trigger: CCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTT...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTGGCTTGGCCGGAGCTaGGGAGGTTTGTGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFWLGRS*GGLCLN
Trigger: ATTTAGACACAAACCTCCCCAGCTCCGGCCAAGCCA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATCCTGGCCACACTAGCTaGTCAGCACTGTGTACGCAC +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHPGHTS*SALCTH
Trigger: GTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCACCAGAAACATCAGCCTaGAAACAGGTCTGCGATCTG +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAPETSA*KQVCDL
Trigger: CAGATCGCAGACCTGTTTCCAGGCTGATGTTTCTGG...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCTGGAAGTGTGTTGTGTaGGATGGGATCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACWKCVV*DGISSH
Trigger: GTGAGAGGAGATCCCATCTCACACAACACACTTCCA...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCACAGGTTCTTAGGACGTaGGAAATGACCTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAQVLRT*EMTSQE
Trigger: CTCTTGAGAGGTCATTTCTCACGTCCTAAGAACCTG...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTCTTGCAGATGGGTaGCTAATATCCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIFLADG*LISRNP
Trigger: AGGATTTCTGGATATTAGTCACCCATCTGCAAGAAA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCACTCCAAAGGTAAACTaGGGGTTTCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFTPKVN*GFPTTA
Trigger: AGCTGTGGTGGGAAACCCTCAGTTTACCTTTGGAGT...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATCACGAGCAGCACATGTaGCAAGCTCACGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHHEQHM*QAHGSC
Trigger: ACAAGAGCCGTGAGCTTGGCACATGTGCTGCTCGTG...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCAAGGTGAGGGCAACTTaGAAGAACCCAGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACKVRAT*KNPEVG
Trigger: TCCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTT...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTAAACCCTTGGCGAAATaGCAGGGGCCGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPKPLAK*QGPHAI
Trigger: GATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTT...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCAACTCAGGAGGTGTTTaGATTCACAGAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEINSGGV*IHRTVL
Trigger: AAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACCCAGAGGCGGATGTTaGAGTGAGCTGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRPRGGC*SELRSH
Trigger: GTGGGATCTCAGCTCACTGCAACATCCGCCTCTGGG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCAACAGGTCTGCGATCTaGAGGGAAGACTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACNRSAI*REDSKG
Trigger: ACCTTTGGAGTCTTCCCTGCAGATCGCAGACCTGTT...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGCATCTGCAGGCGAATaGGCCGGCGCAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLASAGE*AGAGPR
Trigger: CCTGGGGCCTGCGCCGGCCCATTCGCCTGCAGATGC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTGCTCACATGGGCCCTaGAGGATTCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPCSHGP*RIRAIS
Trigger: GCTGATTGCCCGAATCCTCCAGGGCCCATGTGAGCA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCATATCAGGTAGGCACATaGACACGTACCATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAYQVGT*TRTMCA
Trigger: TGCACACATGGTACGTGTCCATGTGCCTACCTGATA...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATTGCAGAAGCCCTTCTaGGCTTCCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRLQKPF*ASTPCP
Trigger: GGGGCATGGAGTGGAAGCCCAGAAGGGCTTCTGCAA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCAGTGTGTTGTGTGAGATaGGATCTCCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVAVCCVR*DLLSLP
Trigger: TGGAAGTGAGAGGAGATCCCATCTCACACAACACAC...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCCCCAACCCTATAAACTaGTCTTTTGTCCTTTACACA +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEIPNPIN*SFVLYT
Trigger: TGTGTAAAGGACAAAAGACCAGTTTATAGGGTTGGG...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCTTCTTGCTCTTCTGTaGCCAATTTCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLLLALL*PISSLS
Trigger: GGAGAGTGAAGAAATTGGCCACAGAAGAGCAAGAAG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTCATTCTTCACGTCATaGTTTGGCCGCTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLSFFTS*FGRCKT
Trigger: TGTCTTACAGCGGCCAAACCATGACGTGAAGAATGA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCCAGAAACATCAGCCTaGAAACAGGTCTGCGATCTG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFPETSA*KQVCDL
Trigger: CAGATCGCAGACCTGTTTCCAGGCTGATGTTTCTGG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp TGTCCCTATGGAGGAAGGAGACTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCGCATGCCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPYGGRRLAIKP*AKCQGPHAIFL
Trigger: CAGAAAGATGGCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCATAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTTCAGAGTGGTTCCCTaGGCCCCCAGGTTACAGCCA +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIFRVVP*APRLQP
Trigger: TGGCTGTAACCTGGGGGCTCAGGGAACCACTCTGAA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCAGACCTTTGATGACATaGAGATGGGCTGCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFRPLMT*RWAAFK
Trigger: CTTGAACGCAGCCCATCTTCATGTCATCAAAGGTCT...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTCGCTCCCTTGGAAAGTaGTCTGGCCAACTGGACATG +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPRSLGK*SGQLDM
Trigger: CATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCG...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCCTCACTTCCACCTCCTaGCCTCCCATCTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACLTSTS*PPIFKK
Trigger: CTTTTTAAAGATGGGAGGTCAGGAGGTGGAAGTGAG...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCAGGTTCTTAGGACGTaGGAAATGACCTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFQVLRT*EMTSQE
Trigger: CTCTTGAGAGGTCATTTCTCACGTCCTAAGAACCTG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCTCAGATCAAAATCTTaGCCCGAGGCCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFLRSKS*PEASAF
Trigger: AAATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTGTGCTACAGAGCTTTaGCATAAAACATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HQALATLAGQHCVRTSEICATEL*HKTWFL
Trigger: CAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGTATGGCTCCCTTGCTaGGGCCCTGTCAGATTATGT +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHVWLPC*GPVRLC
Trigger: ACATAATCTGACAGGGCCTCAGCAAGGGAGCCATAC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGCTATATCCCCAGGCTaGCGTAGACACAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRAISPG*RRHSLC
Trigger: GCAAAGGCTGTGTCTACGGCAGCCTGGGGATATAGC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACGTTCGTTGTCATCCTaGATCTGCAGGCGAATGGGC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRRSLSS*ICRRMG
Trigger: GCCCATTCGCCTGCAGATGCAGGATGACAACGAACG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTGGCGGTTCCTGGGGTaGCCAGATCCCCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFWRFLG*PDPLVL
Trigger: GAGAACGAGGGGATCTGGGCACCCCAGGAACCGCCA...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTCTTTCCATCAGACTTaGCGCAAGGTTATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFSFHQT*RKVMWL
Trigger: CAGCCACATAACCTTGCGGCAAGTCTGATGGAAAGA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGCTCCATCCTCCCCATaGACCTTCACCAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPAPSSP*TFTRWP
Trigger: AGGCCACCTGGTGAAGGTGCATGGGGAGGATGGAGC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGGCACAGACTGTTCTTaGCCTTTTCTCCCATTGGGG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHGTDCS*PFLPLG
Trigger: CCCCAATGGGAGAAAAGGGCAAGAACAGTCTGTGCC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATAGGCTCAAAGACGCCTaGTATCAGGAGCTCCTGATC +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHRLKDA*YQELLI
Trigger: GATCAGGAGCTCCTGATAGCAGGCGTCTTTGAGCCT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGCCCCACAGGGCTGGTaGTGCTGTCCCTATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFAPQGW*CCPYGG
Trigger: TCCTCCATAGGGACAGCAGCACCAGCCCTGTGGGGC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCATCCAGAAATCCTCTTaGCTCAACTCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLIQKSS*LNSTPS
Trigger: ACTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGAT...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGCCTGGAAACAGGTCTaGGATCTGCAGGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPAWKQV*DLQGRL
Trigger: GAGTCTTCCCTGCAGATCGCAGACCTGTTTCCAGGC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGGCCCCTGGAGTCTGTaGAGCTTGGCATCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPGPWSL*SLASGH
Trigger: GTGACCAGATGCCAAGCTCCACAGACTCCAGGGGCC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCTGTGCGCATCAGCTGTaGGGTGTCCTCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLCAHQL*GVLLQG
Trigger: CCCCTGCAGGAGGACACCCCACAGCTGATGCGCACA...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATATCCCCTCGTTCTCATaGCTCAGATTGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHIPSFS*LRLLLG
Trigger: CCCCAGCAACAATCTGAGCCATGAGAACGAGGGGAT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGGGTCTTATGGGCAATaGCGGTTCCTGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPGSYGQ*RFLGCP
Trigger: TGGGCACCCCAGGAACCGCCATTGCCCATAAGACCC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTTCCTGGGGGTCTTATaGGCAATGGCGGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIFLGVL*AMAVPG
Trigger: CCCAGGAACCGCCATTGCCCATAAGACCCCCAGGAA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAAGTCCACCTTCCTTTaGAGGCACCAACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRKSTFL*RHQPGA
Trigger: AGCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGCTCCAGGTAGCAAATaGTGGCTTGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLAPGSK*WLGRSW
Trigger: CCAGCTCCGGCCAAGCCATCATTTGCTACCTGGAGC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATTGGAAAGAATGGTCTTaGCTGCAAACATCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHWKEWS*LQTSPQ
Trigger: CTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCA...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATTCGGCGATGTATCTGTaGCACCACATTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHSAMYL*HHILCA
Trigger: AGCACAGAGAATGTGGTGTCACAGATACATCGCCGA...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCTTCAGAACCAAACGTTaGATCAAGTCATGTACCATC +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLFRTKR*IKSCTI
Trigger: GATGGTACATGACTTGATTCAACGTTTGGTTCTGAA...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAGGTTACAGCCAGAGTaGCAGGAGGAGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRLQPE*QEEEDG
Trigger: TCCATCCTCCTCCTCCTGGCACTCTGGCTGTAACCT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACATGGCTCAGATTGTTaGTGGGGTCTCGGCTATCTC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRHGSDC*WGLGYL
Trigger: GAGATAGCCGAGACCCCAGCAACAATCTGAGCCATG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPALMPS*LSSFLI
Trigger: TATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTCGGGGGCAGGAGGGTaGCCAGGGCAGAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEESGAGG*PGQKRL
Trigger: GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGA...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCCACAGGGCTGGTGCTaGTGTCCCTATGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFPQGWC*CPYGGR
Trigger: CCTTCCTCCATAGGGACAGCAGCACCAGCCCTGTGG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACTTACCCCAGTTCTGTaGAGCTTGCAGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRLTPVL*SLQKPF
Trigger: GAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGAGAATGTGACCTTGTaGTTAATTCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACENVTL*LIPPSQ
Trigger: CTGGGATGGTGGAATTAAGCACAAGGTCACATTCTC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTGGAGTCTGTGGAGCTTaGCATCTGGTCACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSGVCGA*HLVTLR
Trigger: CCGGAGGGTGACCAGATGCCAAGCTCCACAGACTCC...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCGTCTGATTCGCCGCTaGTCACTAGGCGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPRLIRR*SLGVLT
Trigger: TGTGAGGACGCCTAGTGACCAGCGGCGAATCAGACG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTTGATGGAGAAGCGGTaGCGTCTGATTCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPLMEKR*RLIRRW
Trigger: CCAGCGGCGAATCAGACGCCACCGCTTCTCCATCAA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGGAGATCTGCTCACATaGGCCCTGGAGGATTCGGGC +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKGDLLT*ALEDSG
Trigger: GCCCGAATCCTCCAGGGCCCATGTGAGCAGATCTCC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCGTGTGGCTGCTCCCTaGCACTTGAGAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIRVAAP*HLRGEI
Trigger: GATTTCTCCTCTCAAGTGCCAGGGAGCAGCCACACG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCAACCTGAAACTTCCTaGCCACCAGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFQPETS*PPGHQA
Trigger: GGCCTGGTGGCCTGGTGGCCAGGAAGTTTCAGGTTG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCCAACCTGAAACTTCCTaGCCACCAGGCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLQPETS*PPGHQA
Trigger: GGCCTGGTGGCCTGGTGGCCAGGAAGTTTCAGGTTG...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTAAGTCCACCTTCCTTTaGAGGCACCAACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIKSTFL*RHQPGA
Trigger: AGCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTT...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCAAAATGGAAAAGTGTaGTCTGCATTACGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLQNGKV*SALRGS
Trigger: ACTTCCACGTAATGCAGACCACACTTTTCCATTTTG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGAGGGCAGGACAAAATaGAAAAGTGTGGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACEGRTK*KSVVCI
Trigger: AATGCAGACCACACTTTTCCATTTTGTCCTGCCCTC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCCTTCTTGCTCTTCTGTaGCCAATTTCTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACLLALL*PISSLS
Trigger: GGAGAGTGAAGAAATTGGCCACAGAAGAGCAAGAAG...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp GCTGTAACAAAGGAAGCCTCTCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCTGTGCAGCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AVTKEASPGGYS*SSYPSSVQLAE
Trigger: TTCTGCAAGCTGCACAGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGGAGAGGCTTCCTTTGTTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCGGGGCATCCACCTCTaGGATCTGAACTTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRGIHL*DLNFGH
Trigger: GTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTGTAGAAATGGCCGTTaGTGGAGAAGCGGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPCRNGR*WRSGGV
Trigger: GACGCCACCGCTTCTCCATCAACGGCCATTTCTACA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATAGACCTTTGATGACATaGAGATGGGCTGCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHRPLMT*RWAAFK
Trigger: CTTGAACGCAGCCCATCTTCATGTCATCAAAGGTCT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTGGAAAGAATGGTCTTaGCTGCAAACATCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPWKEWS*LQTSPQ
Trigger: CTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCGATATCAGCTGCACTaGTGCCCAGCTGCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPRYQLH*CPAACQ
Trigger: TTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATAACTCAACTCCAAGTTaGAGTCCATCCAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHNSTPS*SPSSLV
Trigger: CACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAGACAGACGTGTGGCTaGTCCCTGGCACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSRQTCG*SLALER
Trigger: CCTCTCAAGTGCCAGGGAGCAGCCACACGTCTGTCT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTAGACAGACGTGTGGCTaGTCCCTGGCACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRQTCG*SLALER
Trigger: CCTCTCAAGTGCCAGGGAGCAGCCACACGTCTGTCT...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGACATGAAGATGGGCTaGGTTCAAGGCACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRDMKMG*VQGTCH
Trigger: ATGACAGGTGCCTTGAACGCAGCCCATCTTCATGTC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATAAGAATGGTCTTGACTaGAAACATCGCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHKNGLD*KHRPSF
Trigger: GAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCAAACGTGAAAATGTGTaGTGCTATATCAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFKRENV*CYIRDA
Trigger: AGCGTCCCTGATATAGCAGCACACATTTTCACGTTT...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACTGAGATCTGAACTTTaGGCACAGTCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRLRSEL*AQSGAS
Trigger: TGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCGTCTGATTCGCCGCTaGTCACTAGGCGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRLIRR*SLGVLT
Trigger: TGTGAGGACGCCTAGTGACCAGCGGCGAATCAGACG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGACAGAGCCATAGGCTaGTGTGAACACGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPDRAIG*CEHGCL
Trigger: AAGACATCCGTGTTCACACCAGCCTATGGCTCTGTC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTCAGCGGGTAATCGGTaGCCTTCAGCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPSAGNR*PSASVS
Trigger: AGAAACAGAAGCTGAAGGCCACCGATTACCCGCTGA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAGACAGGCTGTCAGCTaGGTACAGAGAAACACACAG +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRRQAVS*VQRNTQ
Trigger: CTGTGTGTTTCTCTGTACCCAGCTGACAGCCTGTCT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTATTAGCCGGGCGTGGTaGCGGGTCCCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSISRAW*RVPVIP
Trigger: TGGAATTACAGGGACCCGCCACCACGCCCGGCTAAT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp CAACTTGCAAGAACCCAGAGGTTGGAAAGAATGGTCTaGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLARTQRLERMV*TANIAPASSAG
Trigger: TCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAACCTCTGGGTTCTTGCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp GCCTCAACTCAACTCCAAGTTGAAGTCCATCCAGCCTaGTGCACGTTCTTCACCAATACGTACAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ASTQLQVEVHPA*CTFFTNTYRED
Trigger: GTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATCACTCAGTAGCAAGATaGGGCTTCATTCTTGGAATG +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHHSVAR*GFILGM
Trigger: CATTCCAAGAATGAAGCCTCATCTTGCTACTGAGTG...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACGATATCAGCTGCACTaGTGCCCAGCTGCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKRYQLH*CPAACQ
Trigger: TTGACAGGCAGCTGGGCATCAGTGCAGCTGATATCG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATTAAGACCACAGCTGTaGGCCTTCTCAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRLRPQL*AFSRSH
Trigger: ATGGCTTCTTGAGAAGGCTCACAGCTGTGGTCTTAA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCACGCTCCCTTGGAAAGTaGTCTGGCCAACTGGACATG +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSRSLGK*SGQLDM
Trigger: CATGTCCAGTTGGCCAGATCACTTTCCAAGGGAGCG...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACTCAGATCAAAATCTTaGCCCGAGGCCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRLRSKS*PEASAF
Trigger: AAATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCAGGGACGCTTATGGTaGTCTCCTGTCTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPQGRLW*SPVSYL
Trigger: GAGATAGGAGACAGGAGATCACCATAAGCGTCCCTG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCATCAGATTATGTTAGATaGGTAAACGCATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GSRDRELSADFYIQLQVASDYVR*VNASVC
Trigger: ACACACTGATGCGTTTACTCATCTAACATAATCTGA...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCGTTCGTTGTCATCCTaGATCTGCAGGCGAATGGGC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRSLSS*ICRRMG
Trigger: GCCCATTCGCCTGCAGATGCAGGATGACAACGAACG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCCACGAGCAGCACATGTaGCAAGCTCACGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLHEQHM*QAHGSC
Trigger: ACAAGAGCCGTGAGCTTGGCACATGTGCTGCTCGTG...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTCTTTCCATCAGACTTaGCGCAAGGTTATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPSFHQT*RKVMWL
Trigger: CAGCCACATAACCTTGCGGCAAGTCTGATGGAAAGA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAATACGTGGGCTTATTaGATCTACCCCACGGATGGT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRNTWAY*IYPTDG
Trigger: ACCATCCGTGGGGTAGATGCAATAAGCCCACGTATT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTATGCCAGGGGCCGCATaGCATCTTTCTGCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSMPGAA*HLSAVY
Trigger: GTAGACTGCAGAAAGATGGCATGCGGCCCCTGGCAT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTGTCTCTGTTTCAACTaGTGCTATTTCAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFCLCFN*CYFKEP
Trigger: GGGTTCTTTGAAATAGCAGCAGTTGAAACAGAGACA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATACCAGTGAGAAAATCTaGTCCACACTGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHTSEKI*STLWQS
Trigger: ACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGT...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCCAGGAGGAGGAGGATaGAGGGGGTCGAATGCGTTC +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLPGGGG*RGSNAF
Trigger: GAACGCATTCGACCCCCTCCATCCTCCTCCTCCTGG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTCAGGGGCTTCAGAGTaGTTCCCTGAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVSGASE*FPEPPG
Trigger: ACCTGGGGGCTCAGGGAACCACTCTGAAGCCCCTGA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCTGAGATCTGAACTTTaGGCACAGTCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFILRSEL*AQSGAS
Trigger: TGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATTCTCACCACTCGTATaGACCACGTACAAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRFSPLV*TTYKAN
Trigger: GTTTGCCTTGTACGTGGTCCATACGAGTGGTGAGAA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGGGAGATCTGCTCACATaGGCCCTGGAGGATTCGGGC +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEEGDLLT*ALEDSG
Trigger: GCCCGAATCCTCCAGGGCCCATGTGAGCAGATCTCC...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGGCTCAGATTGTTGCTaGGGTCTCGGCTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFGSDCC*GLGYLL
Trigger: GAGGAGATAGCCGAGACCCCAGCAACAATCTGAGCC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGGCAATGGCGGTTCCTaGGGTGCCCAGATCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLGNGGS*GAQIPS
Trigger: CGAGGGGATCTGGGCACCCCAGGAACCGCCATTGCC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTGGCTTGGCCGGAGCTaGGGAGGTTTGTGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPWLGRS*GGLCLN
Trigger: ATTTAGACACAAACCTCCCCAGCTCCGGCCAAGCCA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCCATGGAGGCAGAGATaGAGGCAGAATCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPPWRQR*RQNPLF
Trigger: GAAGAGTGGATTCTGCCTCCATCTCTGCCTCCATGG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGCTTTCTATTACATCTaGAAGAAGGGGGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRAFYYI*KKGAPH
Trigger: ATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp AGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTaGCCCTTTTCTCCCATTGGGGTTGGATTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: SFLIGVPGHRLF*PFSPIGVGFKD
Trigger: ATCTTTAAATCCAACCCCAATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp AATGGAAAAGTGTGGTCTGCATTACGTGGAAGTGTGTaGTGTGAGATGGGATCTCCTCTCACTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NGKVWSALRGSV*CEMGSPLTSTS
Trigger: GGAGGTGGAAGTGAGAGGAGATCCCATCTCACACAACACACTTCCACGTAATGCAGACCACACTTTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGGGCCACGTCGTAGGTaGCTTCCTCCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLGPRRR*LPPPGP
Trigger: AGGACCAGGTGGAGGAAGTCACCTACGACGTGGCCC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCGGCCAACTAAGGCCCTaGACATTCAAAATAAAAATT +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFGQLRP*TFKIKI
Trigger: AATTTTTATTTTGAATGTTCAGGGCCTTAGTTGGCC...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGCCTGGCCAAGATGGTaGAACCCCACCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLAWPRW*NPTSTK
Trigger: TTTAGTAGAGGTGGGGTTTCACCATCTTGGCCAGGC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGCCTGGCCAAGATGGTaGAACCCCACCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSAWPRW*NPTSTK
Trigger: TTTAGTAGAGGTGGGGTTTCACCATCTTGGCCAGGC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATCTTCTTCCTCCCGGTaGCGGAGCTGTAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKSSSSR*RSCKFW
Trigger: CCAGAATTTACAGCTCCGGCACCGGGAGGAAGAAGA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSRPSFK*RKTFDD
Trigger: GTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTGCACTGATGCCCAGCTaGCTGTCAAGCTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSALMPS*LSSFLI
Trigger: TATCAGGAAGCTTGACAGGCAGCTGGGCATCAGTGC...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCTTACCCCAGTTCTGTaGAGCTTGCAGAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSLTPVL*SLQKPF
Trigger: GAAGGGCTTCTGCAAGCTGCACAGAACTGGGGTAAG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGGGGCTTCAGGCCCCTaGAGTCTGTGGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEGASGP*SLWSLA
Trigger: TGCCAAGCTCCACAGACTCCAGGGGCCTGAAGCCCC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTCAGCGGGTAATCGGTaGCCTTCAGCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPSAGNR*PSASVS
Trigger: AGAAACAGAAGCTGAAGGCCACCGATTACCCGCTGA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAAGTGCCTAGCTTCCTaGGGGTCTTATGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSKCLAS*GSYGQW
Trigger: CCATTGCCCATAAGACCCCCAGGAAGCTAGGCACTT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCTTGTGCTGGTTGCCTaGAATTTAATTACATGTGAA +
Preference number: 4 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFLVLVA*NLITCE
Trigger: TTCACATGTAATTAAATTCCAGGCAACCAGCACAAG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGGAAGCCTCTCCCGGTaGCTACTCTTTGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPGSLSR*LLFVFL
Trigger: TAAGAAGACAAAGAGTAGCCACCGGGAGAGGCTTCC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGATTAGCCGGGCGTGGTaGCGGGTCCCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEEISRAW*RVPVIP
Trigger: TGGAATTACAGGGACCCGCCACCACGCCCGGCTAAT...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGCAAAACGATTTAAGTaGAAACGTGAAAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: WRKETCYKTLGEMPGAACAKRFK*KRENVC
Trigger: GCACACATTTTCACGTTTCCACTTAAATCGTTTTGC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGCTCCAGGTAGCAAATaGTGGCTTGGCCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEAPGSK*WLGRSW
Trigger: CCAGCTCCGGCCAAGCCATCATTTGCTACCTGGAGC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCAAACAACCCAAATGGTaGACCTGGAGAACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPKQPKW*TWRTLF
Trigger: GAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTTAAGACCACAGCTGTaGGCCTTCTCAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPLRPQL*AFSRSH
Trigger: ATGGCTTCTTGAGAAGGCTCACAGCTGTGGTCTTAA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCTTAGGACGTGAGAAATaGCCTCTCAAGAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLLGREK*PLKRAG
Trigger: TCCTGCCCTCTTGAGAGGTCATTTCTCACGTCCTAA...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGGTTTTTCCTTCACTTaGTCACCTTGTAACATAAGC +
Preference number: 4 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHGFSFT*SPCNIS
Trigger: GCTTATGTTACAAGGTGATCAAGTGAAGGAAAAACC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCTCGGCGATGTATCTGTaGCACCACATTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLSAMYL*HHILCA
Trigger: AGCACAGAGAATGTGGTGTCACAGATACATCGCCGA...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTACTCCAAAGGTAAACTaGGGGTTTCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFTPKVN*GFPTTA
Trigger: AGCTGTGGTGGGAAACCCTCAGTTTACCTTTGGAGT...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTCCAGATACCGGATCTaGTCGTCCGCTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEESRYRI*SSAVLS
Trigger: AGAGAGGACAGCGGACGAGCAGATCCGGTATCTGGA...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGGAGCACGGTGTACTTaGGCATCAGCTTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPGARCT*ASASLL
Trigger: AAGTAAAGAAGCTGATGCGCAAGTACACCGTGCTCC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSSMERK*LASWGS
Trigger: AGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGACATGAAGATGGGCTaGGTTCAAGGCACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSDMKMG*VQGTCH
Trigger: ATGACAGGTGCCTTGAACGCAGCCCATCTTCATGTC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTCAAACGATATCAGCTaGACTGATGCCCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSSNDIS*TDAQLP
Trigger: AGGCAGCTGGGCATCAGTGCAGCTGATATCGTTTGA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAACAGGTCTGCGATCTaGAGGGAAGACTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSNRSAI*REDSKG
Trigger: ACCTTTGGAGTCTTCCCTGCAGATCGCAGACCTGTT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACCAGGAGGAGGAGGATaGAGGGGGTCGAATGCGTTC +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEPGGGG*RGSNAF
Trigger: GAACGCATTCGACCCCCTCCATCCTCCTCCTCCTGG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGGAGTCTGTGGAGCTTaGCATCTGGTCACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLGVCGA*HLVTLR
Trigger: CCGGAGGGTGACCAGATGCCAAGCTCCACAGACTCC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGACAGAGCCATAGGCTaGTGTGAACACGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLDRAIG*CEHGCL
Trigger: AAGACATCCGTGTTCACACCAGCCTATGGCTCTGTC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTGTGACTTCCTCCACCTaGTCCTTCTCCATTAGGAAC +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSVTSST*SFSIRN
Trigger: GTTCCTAATGGAGAAGGACCAGGTGGAGGAAGTCAC...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGTGACTTCCTCCACCTaGTCCTTCTCCATTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLVTSST*SFSIRN
Trigger: GTTCCTAATGGAGAAGGACCAGGTGGAGGAAGTCAC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTAGACAGGCTGTCAGCTaGGTACAGAGAAACACACAG +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRQAVS*VQRNTQ
Trigger: CTGTGTGTTTCTCTGTACCCAGCTGACAGCCTGTCT...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTAAGGTGGAGAAGAGATaGGCAGTGCCTCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVKVEKR*AVPLPQ
Trigger: CTGGGGTAGAGGCACTGCCCATCTCTTCTCCACCTT...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCATGCCCCACAGGGCTaGTGCTGCTGTCCCTATGGA +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLHAPQG*CCCPYG
Trigger: TCCATAGGGACAGCAGCACCAGCCCTGTGGGGCATG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGGATCAGTGGCTCCTCTaGTTTTCCTGCTCACGAGCA +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEEDQWLL*FSCSRA
Trigger: TGCTCGTGAGCAGGAAAATCAGAGGAGCCACTGATC...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAAAACAACCCAAATGGTaGACCTGGAGAACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSKQPKW*TWRTLF
Trigger: GAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTT...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCATTTCCCTTCAACCTaGAACTTCCTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVHFPST*NFLATR
Trigger: CCTGGTGGCCAGGAAGTTTCAGGTTGAAGGGAAATG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGTCTCCACACACAAGGTaGGGGCAACTTGCAAGAACC +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLSPHTR*GQLART
Trigger: GGTTCTTGCAAGTTGCCCTCACCTTGTGTGTGGAGA...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCTCACTTCCACCTCCTaGCCTCCCATCTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFLTSTS*PPIFKK
Trigger: CTTTTTAAAGATGGGAGGTCAGGAGGTGGAAGTGAG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAATTTCTTCACTCTCCTaGCACTTTGAAGTAACCACT +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRISSLS*HFEVTT
Trigger: AGTGGTTACTTCAAAGTGTCAGGAGAGTGAAGAAAT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCAGGGACGCTTATGGTaGTCTCCTGTCTCCTATCTC +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVQGRLW*SPVSYL
Trigger: GAGATAGGAGACAGGAGATCACCATAAGCGTCCCTG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATTCAGAACCAAACGTTaGATCAAGTCATGTACCATC +
Preference number: 4 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRFRTKR*IKSCTI
Trigger: GATGGTACATGACTTGATTCAACGTTTGGTTCTGAA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGTATGGCTCCCTTGCTaGGGCCCTGTCAGATTATGT +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLVWLPC*GPVRLC
Trigger: ACATAATCTGACAGGGCCTCAGCAAGGGAGCCATAC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTATGGAGGGGGTCGAATaGGTTCGTTGTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVMEGVE*VRCHPA
Trigger: TGCAGGATGACAACGAACGCATTCGACCCCCTCCAT...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCATGGCTCAGATTGTTaGTGGGGTCTCGGCTATCTC +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLHGSDC*WGLGYL
Trigger: GAGATAGCCGAGACCCCAGCAACAATCTGAGCCATG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGATCACATAGGTGGCTaGTCAGAGGAGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLDHIGG*SEELRR
Trigger: TCTCCTCAGCTCCTCTGAGCAGCCACCTATGTGATC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATCAACTGCCCAGCTCTaGAAACATTCTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSSTAQL*KHSVER
Trigger: TCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAACTGCCCAGCTCTaGAAACATTCTGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFSTAQL*KHSVER
Trigger: TCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGA...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCTGCTCACATGGGCCCTaGAGGATTCGGGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLCSHGP*RIRAIS
Trigger: GCTGATTGCCCGAATCCTCCAGGGCCCATGTGAGCA...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCCCATTAGGAACACTTTaGAGATCTGCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLPLGTL*RSAHMG
Trigger: GCCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGG...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCCATTAGGAACACTTTaGAGATCTGCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFPLGTL*RSAHMG
Trigger: GCCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTATCAGGTAGGCACATaGACACGTACCATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSYQVGT*TRTMCA
Trigger: TGCACACATGGTACGTGTCCATGTGCCTACCTGATA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTCAGTGTAAAAATACGTaGGCTTATTGCATCTACCCC +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIQCKNT*AYCIYP
Trigger: GGGGTAGATGCAATAAGCCCACGTATTTTTACACTG...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCCATGGAGGCAGAGATaGAGGCAGAATCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVPWRQR*RQNPLF
Trigger: GAAGAGTGGATTCTGCCTCCATCTCTGCCTCCATGG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACCTGGCCACACTAGCTaGTCAGCACTGTGTACGCAC +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEPGHTS*SALCTH
Trigger: GTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCACCTTGGAAAGTGATCTaGCCAACTGGACATGTTGCA +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSPWKVI*PTGHVA
Trigger: TGCAACATGTCCAGTTGGCCAGATCACTTTCCAAGG...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTGCTTTCTATTACATCTaGAAGAAGGGGGCGCCACAT +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFAFYYI*KKGAPH
Trigger: ATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGC...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCTGCTCCCTGGCACTTaGGAGGAGAAATCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLLPGT*EEKSFL
Trigger: AAGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGTGGAAGTGTGTTGTGTaGGATGGGATCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLWKCVV*DGISSH
Trigger: GTGAGAGGAGATCCCATCTCACACAACACACTTCCA...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCAACATCACTGCGTGTaGGCATCAGCTGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLQHHCV*ASAVGC
Trigger: ACACCCCACAGCTGATGCGCACACGCAGTGATGTTG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCTGGAGGAAGGAGACTTaGTATAAAACCCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLWRKET*YKTLGE
Trigger: TTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGCCAACTGGACATGTTaGAGTATTTCCCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKANWTC*SISPSN
Trigger: GTTAGATGGGGAAATACTGCAACATGTCCAGTTGGC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGAGAATGTGACCTTGTaGTTAATTCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSENVTL*LIPPSQ
Trigger: CTGGGATGGTGGAATTAAGCACAAGGTCACATTCTC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCGTGAAAATGTGTGCTaGTATATCAGGGACGCTTAT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPRENVC*YIRDAY
Trigger: ATAAGCGTCCCTGATATAGCAGCACACATTTTCACG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTCCCACCACAGCTTGTaGATCTTGTGCTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSSHHSL*ILCSVK
Trigger: TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGCTCCTGATCTTGCTTaGTCAATCTCCATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLAPDLA*SISIAR
Trigger: CCTGGCTATGGAGATTGACCAAGCAAGATCAGGAGC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAAAGGTGGAGAAGAGATaGGCAGTGCCTCTACCCCAG +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEKVEKR*AVPLPQ
Trigger: CTGGGGTAGAGGCACTGCCCATCTCTTCTCCACCTT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATTAGTATCGCTCCCTTaGAAAGTGATCTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSLVSLP*KVIWPT
Trigger: AGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTGCAAAACGATTTAAGTaGAAACGTGAAAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: ERMVLTANIAPASSAGRPAKRFK*KRENVC
Trigger: GCACACATTTTCACGTTTCCACTTAAATCGTTTTGC...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACATTTCCCTTCAACCTaGAACTTCCTGGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEHFPST*NFLATR
Trigger: CCTGGTGGCCAGGAAGTTTCAGGTTGAAGGGAAATG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCCATCTTTAAAAAGCTaGGTCTGCCTTAGTATCGCT +
Preference number: 4 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFPSLKS*VCLSIA
Trigger: AGCGATACTAAGGCAGACTCAGCTTTTTAAAGATGG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTTGTGCTACAGAGCTTTaGCATAAAACATGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VIGQSFLLHLEEGGATFICATEL*HKTWFL
Trigger: CAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACA...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCATATCTCATCTCATCTaGGCGAAGCAAGACTTTGTG +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLISHLI*AKQDFV
Trigger: CACAAAGTCTTGCTTCGCTCAGATGAGATGAGATAT...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTATATCTCATCTCATCTaGGCGAAGCAAGACTTTGTG +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSISHLI*AKQDFV
Trigger: CACAAAGTCTTGCTTCGCTCAGATGAGATGAGATAT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAAACACTTTGGAGATCTaGTCACATGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPENTLEI*SHGPWR
Trigger: CCTCCAGGGCCCATGTGAGCAGATCTCCAAAGTGTT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACGCCCCAGCTTCAAGTaGAGGAAGACCTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPERPSFK*RKTFDD
Trigger: GTCATCAAAGGTCTTCCTGCACTTGAAGCTGGGGCG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGAAGAATGGTCTTGACTaGAAACATCGCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLKNGLD*KHRPSF
Trigger: GAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGATCACATAGGTGGCTaGTCAGAGGAGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLDHIGG*SEELRR
Trigger: TCTCCTCAGCTCCTCTGAGCAGCCACCTATGTGATC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATGGAAAAGTGTGGTCTaGATTACGTGGAAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSWKSVV*ITWKCV
Trigger: AACACACTTCCACGTAATGCAGACCACACTTTTCCA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCTTAAGAGAGCTTCTTaGTCTTCTGTGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSLKRAS*SSVANF
Trigger: GAAATTGGCCACAGAAGAGCAAGAAGCTCTCTTAAG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCATCCCCTCGTTCTCATaGCTCAGATTGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLIPSFS*LRLLLG
Trigger: CCCCAGCAACAATCTGAGCCATGAGAACGAGGGGAT...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCAAAATGGAAAAGTGTaGTCTGCATTACGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPQNGKV*SALRGS
Trigger: ACTTCCACGTAATGCAGACCACACTTTTCCATTTTG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGAGATCTTTGTTTCTTaGGACATTTCCTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLEIFVS*DISFHS
Trigger: TGAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGCACTCAGTAGCAAGATaGGGCTTCATTCTTGGAATG +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEEHSVAR*GFILGM
Trigger: CATTCCAAGAATGAAGCCTCATCTTGCTACTGAGTG...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGCTATCAGGAGCTCCTaGTCTTGCTTGGTCAATCTC +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLAIRSS*SCLVNL
Trigger: GAGATTGACCAAGCAAGATCAGGAGCTCCTGATAGC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGGTTTTTCCTTCACTTaGTCACCTTGTAACATAAGC +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSGFSFT*SPCNIS
Trigger: GCTTATGTTACAAGGTGATCAAGTGAAGGAAAAACC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGACTCTCCTGACACTTTaGAGTAACCACTCAACTCCA +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLTLLTL*SNHSTP
Trigger: TGGAGTTGAGTGGTTACTTCAAAGTGTCAGGAGAGT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTACTCTCCTGACACTTTaGAGTAACCACTCAACTCCA +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVTLLTL*SNHSTP
Trigger: TGGAGTTGAGTGGTTACTTCAAAGTGTCAGGAGAGT...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTATTTCTTCACTCTCCTaGCACTTTGAAGTAACCACT +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSISSLS*HFEVTT
Trigger: AGTGGTTACTTCAAAGTGTCAGGAGAGTGAAGAAAT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAATCCATGGAAAGAAAGTaGCTAGCTTCCTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPESMERK*LASWGS
Trigger: AGACCCCCAGGAAGCTAGGCACTTTCTTTCCATGGA...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAAACTCAGGAGGTGTTTaGATTCACAGAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKNSGGV*IHRTVL
Trigger: AAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTT...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGTCCATCCAGCCTTGTaGACGTTCTTCACCAATACG +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEVHPAL*TFFTNT
Trigger: CGTATTGGTGAAGAACGTGCACAAGGCTGGATGGAC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGTCCATCCAGCCTTGTaGACGTTCTTCACCAATACG +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLVHPAL*TFFTNT
Trigger: CGTATTGGTGAAGAACGTGCACAAGGCTGGATGGAC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGTCCCACCACAGCTTGTaGATCTTGTGCTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLSHHSL*ILCSVK
Trigger: TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGA...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGAGTGATCTGGCCAACTaGACATGTTGCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEESDLAN*TCCSIS
Trigger: GGAAATACTGCAACATGTCCAGTTGGCCAGATCACT...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTAGTATCGCTCCCTTaGAAAGTGATCTGGCCAACT +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEELVSLP*KVIWPT
Trigger: AGTTGGCCAGATCACTTTCCAAGGGAGCGATACTAA...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEEICSTL*QSVSVS
Trigger: TGAAACAGAGACACTTTGCCACAGTGTGGAGCAGAT...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCCCAACCCTATAAACTaGTCTTTTGTCCTTTACACA +
Preference number: 4 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSPNPIN*SFVLYT
Trigger: TGTGTAAAGGACAAAAGACCAGTTTATAGGGTTGGG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTCATTCTTCACGTCATaGTTTGGCCGCTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVSFFTS*FGRCKT
Trigger: TGTCTTACAGCGGCCAAACCATGACGTGAAGAATGA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAAGGCAAACTCCTCTGCTaGATTCTCAATCTTAAATTT +
Preference number: 4 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKGKLLC*ILNLKF
Trigger: AAATTTAAGATTGAGAATTCAGCAGAGGAGTTTGCC...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCAACTCAACTCCAAGTTaGAGTCCATCCAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLNSTPS*SPSSLV
Trigger: CACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTT...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATCAGATTATGTTAGATaGGTAAACGCATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSSDYVR*VNASVC
Trigger: ACACACTGATGCGTTTACTCATCTAACATAATCTGA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAAATACGTGGGCTTATTaGATCTACCCCACGGATGGT +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPENTWAY*IYPTDG
Trigger: ACCATCCGTGGGGTAGATGCAATAAGCCCACGTATT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTGGAAAAGTGTGGTCTaGATTACGTGGAAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVWKSVV*ITWKCV
Trigger: AACACACTTCCACGTAATGCAGACCACACTTTTCCA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCCAATTTCAGGTTCATTaGACGCAATTACATAAACTC +
Preference number: 4 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPQFQVH*TQLHKL
Trigger: GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTG...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCTTAAGAGAGCTTCTTaGTCTTCTGTGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLKRAS*SSVANF
Trigger: GAAATTGGCCACAGAAGAGCAAGAAGCTCTCTTAAG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGCGTGAAAATGTGTGCTaGTATATCAGGGACGCTTAT +
Preference number: 4 (lower is better)
Translates to: NFRFIARNYINSHKSVEERENVC*YIRDAY
Trigger: ATAAGCGTCCCTGATATAGCAGCACACATTTTCACG...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCAGTGTAAAAATACGTaGGCTTATTGCATCTACCCC +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVQCKNT*AYCIYP
Trigger: GGGGTAGATGCAATAAGCCCACGTATTTTTACACTG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGTGTGTTGTGTGAGATaGGATCTCCTCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLVCCVR*DLLSLP
Trigger: TGGAAGTGAGAGGAGATCCCATCTCACACAACACAC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGTTTCTTGCAGATGGGTaGCTAATATCCAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLFLADG*LISRNP
Trigger: AGGATTTCTGGATATTAGTCACCCATCTGCAAGAAA...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAATGGAGGAAGGAGACTTaGTATAAAACCCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEWRKET*YKTLGE
Trigger: TTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTGTCTCTGTTTCAACTaGTGCTATTTCAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVCLCFN*CYFKEP
Trigger: GGGTTCTTTGAAATAGCAGCAGTTGAAACAGAGACA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAACCAGTGAGAAAATCTaGTCCACACTGTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPETSEKI*STLWQS
Trigger: ACTTTGCCACAGTGTGGAGCAGATTTTCTCACTGGT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCCAATTTCAGGTTCATTaGACGCAATTACATAAACTC +
Preference number: 4 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLQFQVH*TQLHKL
Trigger: GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTG...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAATCTGCTCCACACTGTaGCAAAGTGTCTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEICSTL*QSVSVS
Trigger: TGAAACAGAGACACTTTGCCACAGTGTGGAGCAGAT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGGGCCAACTAAGGCCCTaGACATTCAAAATAAAAATT +
Preference number: 4 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLGQLRP*TFKIKI
Trigger: AATTTTTATTTTGAATGTTCAGGGCCTTAGTTGGCC...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR GCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAATCCAGAAATCCTCTTaGCTCAACTCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEIQKSS*LNSTPS
Trigger: ACTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGAT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
3UTR CAA 72 bp CAAATCATTTTCTCAATTGCAAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCTTTCCCAGCTGTAACA +
Preference number: 4 (lower is better)
Translates to: QIIFSIAKLRRC*HSQNCSFPAVT
Trigger: TGTTACAGCTGGGAAAGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTTTGCAATTGAGAAAATGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGAGATCTTTGTTTCTTaGGACATTTCCTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEEIFVS*DISFHS
Trigger: TGAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR TCA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAGGCAAACTCCTCTGCTaGATTCTCAATCTTAAATTT +
Preference number: 4 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEGKLLC*ILNLKF
Trigger: AAATTTAAGATTGAGAATTCAGCAGAGGAGTTTGCC...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS GCA 90 bp CAGGAGGAGGAGGATGGAGGGGGTCGAATGCGTTCGTTGTCATCCTaGATCTGCAGGCGAATGGGCCGGCGCAGGCCCCAGGAGATGTTC +
Preference number: 5 (lower is better)
Translates to: QEEEDGGGRMRSLSS*ICRRMGRRRPQEMF
Trigger: GAACATCTCCTGGGGCCTGCGCCGGCCCATTCGCCTGCAGATGCAGGATGACAACGAACGCATTCGACCCCCTCCATCCTCCTCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS CCA 90 bp TCCCTGAGCCCCCAGGTTACAGCCAGAGTGCCAGGAGGAGGAGGATaGAGGGGGTCGAATGCGTTCGTTGTCATCCTGCATCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: SLSPQVTARVPGGGG*RGSNAFVVILHLQA
Trigger: CGCCTGCAGATGCAGGATGACAACGAACGCATTCGACCCCCTCCATCCTCCTCCTCCTGGCACTCTGGCTGTAACCTGGGGGCTCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCGTAGCAAATGATGGCTaGGCCGGAGCTGGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: HQALATLAGQHCVRTSEIVANDG*AGAGEV
Trigger: AACCTCCCCAGCTCCGGCCAAGCCATCATTTGCTAC...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS TCA 90 bp TGTGGAGCTTGGCATCTGGTCACCCTCCGGCGGGGCATCCACCTCTaGGATCTGAACTTTGGGCACAGTCAGGGGCTTCAGAGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: CGAWHLVTLRRGIHL*DLNFGHSQGLQSGS
Trigger: GGAACCACTCTGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCGCCGGAGGGTGACCAGATGCCAAGCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS TCA 90 bp TGTGGAGCTTGGCATCTGGTCACCCTCCGGCGGGGCATCCACCTCTaGGATCTGAACTTTGGGCACAGTCAGGGGCTTCAGAGTGGTTTT +
Preference number: 5 (lower is better)
Translates to: CGAWHLVTLRRGIHL*DLNFGHSQGLQSGF
Trigger: AAAACCACTCTGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCGCCGGAGGGTGACCAGATGCCAAGCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478553.1
CDS GCA 90 bp TCGGAAGGAGAGGCTATATCCCCAGGCTGCCGTAGACACAGCCTTTaGTCTCCCGAAAAACACGTTCTAGGCGCCGGGATTCCAGATACC +
Preference number: 5 (lower is better)
Translates to: SEGEAISPGCRRHSL*SPEKHVLGAGIPDT
Trigger: GGTATCTGGAATCCCGGCGCCTAGAACGTGTTTTTCGGGAGAGCAAAGGCTGTGTCTACGGCAGCCTGGGGATATAGCCTCTCCTTCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379400.8
CDS-3UTR CAA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCAGTGGTCATGGTGCTGTaGATGCGGACGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: GSRDRELSADFYIQLQVAVVMVL*MRTLVT
Trigger: TGTCACCAACGTCCGCATCAACAGCACCATGACCAC...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTGGAAAGAATGGTCTaGACTGCAAACATCGCCCCA +
Preference number: 5 (lower is better)
Translates to: HQALATLAGQHCVRTSEILERMV*TANIAP
Trigger: TGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCCAGTTCTGTGCAGCTaGCAGAAGCCCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFPVLCS*QKPFWA
Trigger: AGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCGTGGTCATGGTGCTGTaGATGCGGACGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: WRKETCYKTLGEMPGAACVVMVL*MRTLVT
Trigger: TGTCACCAACGTCCGCATCAACAGCACCATGACCAC...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCTTAGTATCGCTCCCTaGGAAAGTGATCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLLSIAP*ESDLAN
Trigger: GTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTATCCAGAAATCCTCTaGCCTCAACTCAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: HQALATLAGQHCVRTSEIYPEIL*PQLNSK
Trigger: CTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGATA...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCGTTTCCCACCACAGCTaGTGCATCTTGTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLVSHHS*CILCSV
Trigger: AACTGAGCACAAGATGCACAAGCTGTGGTGGGAAAC...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTGGAGTCTGTGGAGCTaGGCATCTGGTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: ERMVLTANIAPASSAGRPWSLWS*ASGHPP
Trigger: CGGAGGGTGACCAGATGCCAAGCTCCACAGACTCCA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATGGAGTCTGTGGAGCTaGGCATCTGGTCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRWSLWS*ASGHPP
Trigger: CGGAGGGTGACCAGATGCCAAGCTCCACAGACTCCA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCGGAGCACGGTGTACTaGCGCATCAGCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFRSTVY*RISFFT
Trigger: AGTAAAGAAGCTGATGCGCAAGTACACCGTGCTCCG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCTCATGGCTCAGATTGTaGCTGGGGTCTCGGCTATCT +
Preference number: 5 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFSWLRL*LGSRLS
Trigger: AGATAGCCGAGACCCCAGCAACAATCTGAGCCATGA...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCTTCTCATGGCTCAGATaGTTGCTGGGGTCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: WRKETCYKTLGEMPGAACFSWLR*LLGSRL
Trigger: TAGCCGAGACCCCAGCAACAATCTGAGCCATGAGAA...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: WRKETCYKTLGEMPGAACPGGYS*SSYPSS
Trigger: AGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGG...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CACCAGGCCCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCT +
Preference number: 5 (lower is better)
Translates to: HQALATLAGQHCVRTSEIKLRRC*HSQNCS
Trigger: AGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTT...GATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGGGCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATGGTCGAATGCGTTCGTaGTCATCCTGCATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHGRMRS*SSCICR
Trigger: CCTGCAGATGCAGGATGACAACGAACGCATTCGACC...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCCGGAGCTGGGGAGGTTaGTGTCTAAATGTTTCCATG +
Preference number: 5 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFRSWGG*CLNVSM
Trigger: CATGGAAACATTTAGACACAAACCTCCCCAGCTCCG...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGACCAGTTCTGTGCAGCTaGCAGAAGCCCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRPVLCS*QKPFWA
Trigger: AGCCCAGAAGGGCTTCTGCAAGCTGCACAGAACTGG...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAGCTTCCTGATAGGAGTCCCAGGGCACAGACTGTTCTTGCCCTTTTCTCCCATTTCTCATGGCTCAGATaGTTGCTGGGGTCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: KLPDRSPRAQTVLALFSHFSWLR*LLGSRL
Trigger: TAGCCGAGACCCCAGCAACAATCTGAGCCATGAGAA...ATGGGAGAAAAGGGCAAGAACAGTCTGTGCCCTGGGACTCCTATCAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCCGAGATCTTTGTTTCTaGAGACATTTCCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLRDLCF*RHFLPL
Trigger: GAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTCG...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AGAAGCCATAGGTATGAATCGGGGGCAGGAGGGTGCCCAGGGCAGAAACGTCTCAAACTCAGGAGGTGTTaGCATTCACAGAACTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSHRYESGAGGCPGQKRLKLRRC*HSQNCS
Trigger: AGAACAGTTCTGTGAATGCAAACACCTCCTGAGTTT...GAGACGTTTCTGCCCTGGGCACCCTCCTGCCCCCGATTCATACCTATGGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TGGAGGAAGGAGACTTGCTATAAAACCCTTGGCGAAATGCCAGGGGCCGCATGCTTACGTGGAAGTGTGTaGTGTGAGATGGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: WRKETCYKTLGEMPGAACLRGSV*CEMGSP
Trigger: AGGAGATCCCATCTCACACAACACACTTCCACGTAA...GCATGCGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAGTCTCCTTCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCTAGGCGTCCTCACATaGCCACGGCGACGCACCCCA +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLGVLT*PRRRTP
Trigger: TGGGGTGCGTCGCCGTGGCAATGTGAGGACGCCTAG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGCTGCTCCCTGGCACTaGAGAGGAGAAATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRAAPWH*RGEIFP
Trigger: AGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAGC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GGGTCCAGGGATAGGGAGCTGTCTGCTGACTTCTACATCCAGCTCCAGGTAGCACACAGCTTGTGCATCTaGTGCTCAGTTAAATACAGT +
Preference number: 5 (lower is better)
Translates to: GSRDRELSADFYIQLQVAHSLCI*CSVKYS
Trigger: ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTG...TGCTACCTGGAGCTGGATGTAGAAGTCAGCAGACAGCTCCCTATCCCTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCAGGTCGAATGCGTTCGTaGTCATCCTGCATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSGRMRS*SSCICR
Trigger: CCTGCAGATGCAGGATGACAACGAACGCATTCGACC...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTCCAAGCTCACGGCTCTaGTGCTGGTTGCCTGGAATT +
Preference number: 5 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSPSSRL*CWLPGI
Trigger: AATTCCAGGCAACCAGCACAAGAGCCGTGAGCTTGG...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACCAAGCTCACGGCTCTaGTGCTGGTTGCCTGGAATT +
Preference number: 5 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKPSSRL*CWLPGI
Trigger: AATTCCAGGCAACCAGCACAAGAGCCGTGAGCTTGG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGCTGCTCCCTGGCACTaGAGAGGAGAAATCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPAAPWH*RGEIFP
Trigger: AGGAAAGATTTCTCCTCTCAAGTGCCAGGGAGCAGC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACAAGGTGAGGGCAACTaGCAAGAACCCAGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKQGEGN*QEPRGW
Trigger: CCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTTACGTGGAAGTGTGTaGTGTGAGATGGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: ERMVLTANIAPASSAGRPLRGSV*CEMGSP
Trigger: AGGAGATCCCATCTCACACAACACACTTCCACGTAA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAAGGGAAGACTATCTTTaGTGCTTTTCAGCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRREDYL*CFSASP
Trigger: GGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCT...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATCTCAGATCAAAATCTaGACCCGAGGCCTCAGCATT +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRSQIKI*TRGLSI
Trigger: AATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAGA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCAGACAGGAGAATCACTaGAACCCCAGAGGCGGATGT +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPRQENH*NPRGGC
Trigger: ACATCCGCCTCTGGGGTTCAAGTGATTCTCCTGTCT...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GTGATAGGGCAGAGCTTTCTATTACATCTGGAAGAAGGGGGCGCCACATTCATTGTTTCCCACCACAGCTaGTGCATCTTGTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VIGQSFLLHLEEGGATFIVSHHS*CILCSV
Trigger: AACTGAGCACAAGATGCACAAGCTGTGGTGGGAAAC...AATGAATGTGGCGCCCCCTTCTTCCAGATGTAATAGAAAGCTCTGCCCTATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CCTGGCCACACTAGCTGGTCAGCACTGTGTACGCACCAGCGAGATCTTTGTTTCACAAGGCTAAAACAATaGGGAAAACCCTTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: PGHTSWSALCTHQRDLCFTRLKQ*GKPFRN
Trigger: GTTTCTGAAGGGTTTTCCCAATTGTTTTAGCCTTGT...GAAACAAAGATCTCGCTGGTGCGTACACAGTGCTGACCAGCTAGTGTGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTCGGAGCACGGTGTACTaGCGCATCAGCTTCTTTACT +
Preference number: 5 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFRSTVY*RISFFT
Trigger: AGTAAAGAAGCTGATGCGCAAGTACACCGTGCTCCG...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTAAAGTCCACCTTCCTTaGGAGGCACCAACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVKVHLP*EAPTRG
Trigger: GCCCCTGGTTGGTGCCTCCAAAGGAAGGTGGACTTT...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTAGACAGGAGAATCACTaGAACCCCAGAGGCGGATGT +
Preference number: 5 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSRQENH*NPRGGC
Trigger: ACATCCGCCTCTGGGGTTCAAGTGATTCTCCTGTCT...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GAAAGAATGGTCTTGACTGCAAACATCGCCCCAGCTTCAAGTGCAGGAAGACCTTCAATCTTAAATTTGTaGAGCAGCAGCTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: ERMVLTANIAPASSAGRPSILNL*SSSFRT
Trigger: GGTCCTGAAGCTGCTGCTCAACAAATTTAAGATTGA...AGGTCTTCCTGCACTTGAAGCTGGGGCGATGTTTGCAGTCAAGACCATTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTCCATTAGGAACACTTaGGAGATCTGCTCACATGGG +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPSIRNT*EICSHG
Trigger: CCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGGA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTTCTTTCCATCAGACTaGCCGCAAGGTTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPFFPSD*PQGYVA
Trigger: AGCCACATAACCTTGCGGCAAGTCTGATGGAAAGAA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGCAAGGTGAGGGCAACTaGCAAGAACCCAGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLQGEGN*QEPRGW
Trigger: CCAACCTCTGGGTTCTTGCAAGTTGCCCTCACCTTG...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVLAIKP*AKCQGP
Trigger: CGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GCCTTGTGCACGTTCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTAAATGTATGGCTCCCTaGCTGAGGCCCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: ALCTFFTNTYREDYLLCFKCMAP*LRPCQI
Trigger: AATCTGACAGGGCCTCAGCAAGGGAGCCATACATTT...AAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGAACGTGCACAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGATTCTCAATCTTAAATTaGTTGAGCAGCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRFSILN*LSSSFR
Trigger: CCTGAAGCTGCTGCTCAACAAATTTAAGATTGAGAA...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCGTAGCAAATGATGGCTaGGCCGGAGCTGGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLVANDG*AGAGEV
Trigger: AACCTCCCCAGCTCCGGCCAAGCCATCATTTGCTAC...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATTCTTTCCATCAGACTaGCCGCAAGGTTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKFFPSD*PQGYVA
Trigger: AGCCACATAACCTTGCGGCAAGTCTGATGGAAAGAA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCGCACCAGCGAGATCTTaGTTTCTTGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPAPARS*FLETFP
Trigger: AGGAAATGTCTCAAGAAACAAAGATCTCGCTGGTGC...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TATATCAGGGACGCTTATGGTGATCTCCTGTCTCCTATCTCATTCTTCACGTCATTGGAAAGAATGGTCTaGACTGCAAACATCGCCCCA +
Preference number: 5 (lower is better)
Translates to: YIRDAYGDLLSPISFFTSLERMV*TANIAP
Trigger: TGGGGCGATGTTTGCAGTCAAGACCATTCTTTCCAA...TGACGTGAAGAATGAGATAGGAGACAGGAGATCACCATAAGCGTCCCTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTGATGAGGCTTCATTCTaGGAATGCATCTCCACACAC +
Preference number: 5 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSDEASF*ECISTH
Trigger: GTGTGTGGAGATGCATTCCAAGAATGAAGCCTCATC...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTCCCGGTGGCTACTCTTaGTCTTCTTACCCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVPGGYS*SSYPSS
Trigger: AGAACTGGGGTAAGAAGACAAAGAGTAGCCACCGGG...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp CTTTCCTCAACTGCCCAGCTCTGCAAACATTCTGTGGAGAGAAGGTGGAGAAGAGTTCAGAACCAAACGTaGAATCAAGTCATGTACCAT +
Preference number: 5 (lower is better)
Translates to: LSSTAQLCKHSVERRWRRVQNQT*NQVMYH
Trigger: ATGGTACATGACTTGATTCAACGTTTGGTTCTGAAC...TCTTCTCCACCTTCTCTCCACAGAATGTTTGCAGAGCTGGGCAGTTGAGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS TCA 90 bp CGCATCAGCTTCTTTACTTCCCGATCTTCTTCCTCCTGGAGCTTCTaGATGAAGCTTTTAAGTACCGGCATCTCGAACTTTATATACTGG +
Preference number: 5 (lower is better)
Translates to: RISFFTSRSSSSWSF*MKLLSTGISNFIYW
Trigger: CCAGTATATAAAGTTCGAGATGCCGGTACTTAAAAGCTTCATTCAGAAGCTCCAGGAGGAAGAAGATCGGGAAGTAAAGAAGCTGATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS-3UTR CAA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGCACCAGCGAGATCTTaGTTTCTTGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLAPARS*FLETFP
Trigger: AGGAAATGTCTCAAGAAACAAAGATCTCGCTGGTGC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATGCCCTTTTCTCCCATaGGGGTTGGATTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKCPFLP*GLDLKI
Trigger: GATCTTTAAATCCAACCCCAATGGGAGAAAAGGGCA...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCTTGCTATAAAACCCTaGGCGAAATGCCAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLLAIKP*AKCQGP
Trigger: CGGCCCCTGGCATTTCGCCAAGGGTTTTATAGCAAG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAATACAGTTCAATCTTAAATTTGTaGAGCAGCAGCTTCAGGACC +
Preference number: 5 (lower is better)
Translates to: KLRVSHHSLCILCSVKYSSILNL*SSSFRT
Trigger: GGTCCTGAAGCTGCTGCTCAACAAATTTAAGATTGA...ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTTCACCAATACGTACAGGGAAGACTATCTTTTGTGCTTTTCAGCCTCTCCCCTTCTCAATCTTAAATTaGTTGAGCAGCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSPIRTGKTIFCAFQPLPFSILN*LSSSFR
Trigger: CCTGAAGCTGCTGCTCAACAAATTTAAGATTGAGAA...GGGGAGAGGCTGAAAAGCACAAAAGATAGTCTTCCCTGTACGTATTGGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AATTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTCCATTAGGAACACTTaGGAGATCTGCTCACATGGG +
Preference number: 5 (lower is better)
Translates to: NFRFIARNYINSHKSVEESIRNT*EICSHG
Trigger: CCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGGA...CTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCCGAGATCTTTGTTTCTaGAGACATTTCCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLRDLCF*RHFLPL
Trigger: GAGTGGAAGGAAATGTCTCAAGAAACAAAGATCTCG...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTGATGAGGCTTCATTCTaGGAATGCATCTCCACACAC +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVDEASF*ECISTH
Trigger: GTGTGTGGAGATGCATTCCAAGAATGAAGCCTCATC...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp AAAGGTAAACTGAGGGTTTCCCACCACAGCTTGTGCATCTTGTGCTCAGTTAAACACAGCTTGTGCATCTaGTGCTCAGTTAAATACAGT +
Preference number: 5 (lower is better)
Translates to: KGKLRVSHHSLCILCSVKHSLCI*CSVKYS
Trigger: ACTGTATTTAACTGAGCACAAGATGCACAAGCTGTG...TTTAACTGAGCACAAGATGCACAAGCTGTGGTGGGAAACCCTCAGTTTACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACTTAGTATCGCTCCCTaGGAAAGTGATCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SNTIVVLVQIKENSYKPELSIAP*ESDLAN
Trigger: GTTGGCCAGATCACTTTCCAAGGGAGCGATACTAAG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTTCAGGTTCATTGCACGCAATTACATAAACTCCCACAAATCGGTCGAAGAGTTTATCCAGAAATCCTCTaGCCTCAACTCAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: FQVHCTQLHKLPQIGRRVYPEIL*PQLNSK
Trigger: CTTGGAGTTGAGTTGAGGCAAGAGGATTTCTGGATA...AACTCTTCGACCGATTTGTGGGAGTTTATGTAATTGCGTGCAATGAACCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TTCTACCAACATATAAACAACCCAAATGGTGAACCTGGAGAACCCTCTTCCCTCGTTCAGAACCAAACGTaGAATCAAGTCATGTACCAT +
Preference number: 5 (lower is better)
Translates to: FYQHINNPNGEPGEPSSLVQNQT*NQVMYH
Trigger: ATGGTACATGACTTGATTCAACGTTTGGTTCTGAAC...GAGGGAAGAGGGTTCTCCAGGTTCACCATTTGGGTTGTTTATATGTTGGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAAAAATGTATGGCTCCCTaGCTGAGGCCCTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEKCMAP*LRPCQI
Trigger: AATCTGACAGGGCCTCAGCAAGGGAGCCATACATTT...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCAACTCAACTCCAAGTaGAAGTCCATCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLQLNSK*KSIQPC
Trigger: ACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAACAACTCAACTCCAAGTaGAAGTCCATCCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SNTIVVLVQIKENSYKPEQLNSK*KSIQPC
Trigger: ACAAGGCTGGATGGACTTCAACTTGGAGTTGAGTTG...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAATCTCAGATCAAAATCTaGACCCGAGGCCTCAGCATT +
Preference number: 5 (lower is better)
Translates to: SNTIVVLVQIKENSYKPESQIKI*TRGLSI
Trigger: AATGCTGAGGCCTCGGGTCAAGATTTTGATCTGAGA...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp TCTAACACTATCGTAGTGCTAGTGCAAATCAAAGAGAACTCTTATAAGCCAGAATGCCCTTTTCTCCCATaGGGGTTGGATTTAAAGATC +
Preference number: 5 (lower is better)
Translates to: SNTIVVLVQIKENSYKPECPFLP*GLDLKI
Trigger: GATCTTTAAATCCAACCCCAATGGGAGAAAAGGGCA...TTCTGGCTTATAAGAGTTCTCTTTGATTTGCACTAGCACTACGATAGTGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GACACCACATTCTCTGTGCTACAGAGCTTTGACATAAAACATGGTTTTTGGTTGACAAGGCTAAAACAATaGGGAAAACCCTTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: DTTFSVLQSFDIKHGFWLTRLKQ*GKPFRN
Trigger: GTTTCTGAAGGGTTTTCCCAATTGTTTTAGCCTTGT...CAACCAAAAACCATGTTTTATGTCAAAGCTCTGTAGCACAGAGAATGTGGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS-3UTR CAA 90 bp GGTCTTTTGTCCTTTACACAATTTCAGGTTCATTGCACGCAATTACATAAACTCCTAGTGGTTAGTAGTTaGCTTTGTGGAAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLLSFTQFQVHCTQLHKLLVVSS*LCGNSS
Trigger: AGAAGAATTTCCACAAAGCAAACTACTAACCACTAG...GAGTTTATGTAATTGCGTGCAATGAACCTGAAATTGTGTAAAGGACAAAAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS GCA 72 bp GAGGATGGAGGGGGTCGAATGCGTTCGTTGTCATCCTaGATCTGCAGGCGAATGGGCCGGCGCAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: EDGGGRMRSLSS*ICRRMGRRRPQ
Trigger: CTGGGGCCTGCGCCGGCCCATTCGCCTGCAGATGCAGGATGACAACGAACGCATTCGACCCCCTCCATCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS CCA 72 bp CCGTTGATGGAGAAGCGGTGGCGTCTGATTCGCCGCTaGTCACTAGGCGTCCTCACATTGCCACGGCGACGC +
Preference number: 6 (lower is better)
Translates to: PLMEKRWRLIRR*SLGVLTLPRRR
Trigger: GCGTCGCCGTGGCAATGTGAGGACGCCTAGTGACCAGCGGCGAATCAGACGCCACCGCTTCTCCATCAACGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CAA 90 bp AAGCGGTGGCGTCTGATTCGCCGCTGGTCACTAGGCGTCCTCACATaGCCACGGCGACGCACCCCAACATCACTGCGTGTGCGCATCAGC +
Preference number: 6 (lower is better)
Translates to: KRWRLIRRWSLGVLT*PRRRTPTSLRVRIS
Trigger: GCTGATGCGCACACGCAGTGATGTTGGGGTGCGTCGCCGTGGCAATGTGAGGACGCCTAGTGACCAGCGGCGAATCAGACGCCACCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS GCA 72 bp TCCTCACATTGCCACGGCGACGCACCCCAACATCACTaGGTGTGCGCATCAGCTGTGGGGTGTCCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: SSHCHGDAPQHH*VCASAVGCPPA
Trigger: TGCAGGAGGACACCCCACAGCTGATGCGCACACGCAGTGATGTTGGGGTGCGTCGCCGTGGCAATGTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CAA 72 bp CGTCTGATTCGCCGCTGGTCACTAGGCGTCCTCACATaGCCACGGCGACGCACCCCAACATCACTGCGTGTG +
Preference number: 6 (lower is better)
Translates to: RLIRRWSLGVLT*PRRRTPTSLRV
Trigger: CACACGCAGTGATGTTGGGGTGCGTCGCCGTGGCAATGTGAGGACGCCTAGTGACCAGCGGCGAATCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS TCA 72 bp TGGCATCTGGTCACCCTCCGGCGGGGCATCCACCTCTaGGATCTGAACTTTGGGCACAGTCAGGGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: WHLVTLRRGIHL*DLNFGHSQGLQ
Trigger: CTGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCGCCGGAGGGTGACCAGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CCA 72 bp CCTCCGGCGGGGCATCCACCTCTGAGATCTGAACTTTaGGCACAGTCAGGGGCTTCAGAGTGGTTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: PPAGHPPLRSEL*AQSGASEWFPE
Trigger: CTCAGGGAACCACTCTGAAGCCCCTGACTGTGCCCAAAGTTCAGATCTCAGAGGTGGATGCCCCGCCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS GCA 72 bp CAGAGTGCCAGGAGGAGGAGGATGGAGGGGGTCGAATaGGTTCGTTGTCATCCTGCATCTGCAGGCGAATGG +
Preference number: 6 (lower is better)
Translates to: QSARRRRMEGVE*VRCHPASAGEW
Trigger: CCATTCGCCTGCAGATGCAGGATGACAACGAACGCATTCGACCCCCTCCATCCTCCTCCTCCTGGCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS GCA 72 bp GTGCCCAGATCCCCTCGTTCTCATGGCTCAGATTGTTaGTGGGGTCTCGGCTATCTCCTCCAGCCTCTGTCG +
Preference number: 6 (lower is better)
Translates to: VPRSPRSHGSDC*WGLGYLLQPLS
Trigger: CGACAGAGGCTGGAGGAGATAGCCGAGACCCCAGCAACAATCTGAGCCATGAGAACGAGGGGATCTGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CCA 72 bp CCCCAGGTTACAGCCAGAGTGCCAGGAGGAGGAGGATaGAGGGGGTCGAATGCGTTCGTTGTCATCCTGCAT +
Preference number: 6 (lower is better)
Translates to: PQVTARVPGGGG*RGSNAFVVILH
Trigger: ATGCAGGATGACAACGAACGCATTCGACCCCCTCCATCCTCCTCCTCCTGGCACTCTGGCTGTAACCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS CAA 72 bp GGTGCCCAGATCCCCTCGTTCTCATGGCTCAGATTGTaGCTGGGGTCTCGGCTATCTCCTCCAGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: GAQIPSFSWLRL*LGSRLSPPASV
Trigger: GACAGAGGCTGGAGGAGATAGCCGAGACCCCAGCAACAATCTGAGCCATGAGAACGAGGGGATCTGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS GCA 72 bp GAGGCTATATCCCCAGGCTGCCGTAGACACAGCCTTTaGTCTCCCGAAAAACACGTTCTAGGCGCCGGGATT +
Preference number: 6 (lower is better)
Translates to: EAISPGCRRHSL*SPEKHVLGAGI
Trigger: AATCCCGGCGCCTAGAACGTGTTTTTCGGGAGAGCAAAGGCTGTGTCTACGGCAGCCTGGGGATATAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379400.8
CDS CCA 72 bp CCCAGATCCCCTCGTTCTCATGGCTCAGATTGTTGCTaGGGTCTCGGCTATCTCCTCCAGCCTCTGTCGAAT +
Preference number: 6 (lower is better)
Translates to: PRSPRSHGSDCC*GLGYLLQPLSN
Trigger: ATTCGACAGAGGCTGGAGGAGATAGCCGAGACCCCAGCAACAATCTGAGCCATGAGAACGAGGGGATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CCA 72 bp CTATTCTATGAGGAGTGGTCCCAGTGGGGAGGGTGCTaGGGCATGGGGCGCCCTGTTAGAAATATACAGGCT +
Preference number: 6 (lower is better)
Translates to: LFYEEWSQWGGC*GMGRPVRNIQA
Trigger: AGCCTGTATATTTCTAACAGGGCGCCCCATGCCCCAGCACCCTCCCCACTGGGACCACTCCTCATAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478553.1
CDS CCA 72 bp TGGTCTGCAGGGAGCAGACCCCTGGCTGATCTCGCTTaGCTGACTCTGACAGAGCCTGACATTCCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: WSAGSRPLADLA*LTLTEPDIPFP
Trigger: AGGAAAAGGAATGTCAGGCTCTGTCAGAGTCAGCCAAGCGAGATCAGCCAGGGGTCTGCTCCCTGCAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478553.1
CDS GCA 72 bp ACCTGGTCCTTCTCCATTAGGAACACTTTGGAGATCTaGTCACATGGGCCCTGGAGGATTCGGGCAATCAGC +
Preference number: 6 (lower is better)
Translates to: TWSFSIRNTLEI*SHGPWRIRAIS
Trigger: GCTGATTGCCCGAATCCTCCAGGGCCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGGAGAAGGACCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379376.2
ENST00000379400.8
CDS CCA 72 bp CTTCCTCCACCTGGTCCTTCTCCATTAGGAACACTTTaGAGATCTGCTCACATGGGCCCACCACTCGTATGG +
Preference number: 6 (lower is better)
Translates to: LPPPGPSPLGTL*RSAHMGPPLVW
Trigger: CCATACGAGTGGTGGGCCCATGTGAGCAGATCTCCAAAGTGTTCCTAATGGAGAAGGACCAGGTGGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478553.1
CDS CCA 72 bp GCTGTTGATGCGGACGTTGGTGACAGAGCCATAGGCTaGTGTGAACACGGATGTCTTATGGTTGTAGAAATG +
Preference number: 6 (lower is better)
Translates to: AVDADVGDRAIG*CEHGCLMVVEM
Trigger: CATTTCTACAACCATAAGACATCCGTGTTCACACCAGCCTATGGCTCTGTCACCAACGTCCGCATCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379376.2
ENST00000379400.8
ENST00000478553.1
CDS CAA 90 bp CAAGATTCAGAGAGCTTTGGTCAGAAGGTTCAAGTCATAAATGCTTaGGAGTGGGGCTATTCTATGAGGAGTGGTCCCAGTGGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: QDSESFGQKVQVINA*EWGYSMRSGPSGEG
Trigger: ACCCTCCCCACTGGGACCACTCCTCATAGAATAGCCCCACTCCAAAGCATTTATGACTTGAACCTTCTGACCAAAGCTCTCTGAATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478553.1
CDS CAA 72 bp GAGAGCTTTGGTCAGAAGGTTCAAGTCATAAATGCTTaGGAGTGGGGCTATTCTATGAGGAGTGGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: ESFGQKVQVINA*EWGYSMRSGPS
Trigger: ACTGGGACCACTCCTCATAGAATAGCCCCACTCCAAAGCATTTATGACTTGAACCTTCTGACCAAAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478553.1