RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASSF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000068028

Ensembl transcript IDs: ENST00000327761.7, ENST00000357043.6, ENST00000359365.8, ENST00000359365.9, ENST00000395117.6, ENST00000395126.7, ENST00000478619.1, ENST00000482447.1, ENST00000488024.1, ENST00000494145.1, ENST00000616212.4

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGTCCTGGGCCCCGCCGGGCATCCTGCAAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAGGGCGCACCAGCTTCAGCTGAACCT +
Preference number: 1 (lower is better)
Translates to: PVLGPAGHPARRVAS*WRAQRQGAPASAEP
Trigger: AGGTTCAGCTGAAGCTGGTGCGCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGGCCCAGGACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR CCA 90 bp CTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: LTRHALGAACCLPST*GYKRSPKGAGVQGL
Trigger: GAGGCCCTGCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR GCA 90 bp GCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCG +
Preference number: 1 (lower is better)
Translates to: ALSHSHGTHLALPAV*LPPGGTRGHPRGQA
Trigger: CGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR GCA 90 bp CCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGGGGGTACAAGAGGTCACCCAAGGGG +
Preference number: 1 (lower is better)
Translates to: PTGPVTLTRHALGAA*CLPSTWGYKRSPKG
Trigger: CCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR CCA 90 bp CCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTaGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTG +
Preference number: 1 (lower is better)
Translates to: PAQEGLHAHSFHRPH*PCHTHTARTWRCLL
Trigger: CAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CCA 90 bp TTCCACAGGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCCTTCCACCTGGGGGTACAAGAGGTC +
Preference number: 1 (lower is better)
Translates to: FHRPHWPCHTHTART*RCLLSAFHLGVQEV
Trigger: GACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCCTGTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR GCA 90 bp GTCATTTTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTaGCAGGAGCCGCAGCCGCAGGGGCTGCTCATCATCCAACAGCTT +
Preference number: 1 (lower is better)
Translates to: VIFLQDKAQGLVTGP*QEPQPQGLLIIQQL
Trigger: AAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCGGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAAAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR CCA 90 bp ATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTaGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCC +
Preference number: 1 (lower is better)
Translates to: MRAEGCRAIPGYTHR*TQGASYFAVLWAHS
Trigger: GGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CCA 90 bp CCACTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTaGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGT +
Preference number: 1 (lower is better)
Translates to: PLRPSNEGRGVQSHT*LHPQVDTGSKLLRC
Trigger: ACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR GCA 90 bp CTTCCGCAAGTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATCCACCACCAAGAACTTTCGCAGCAG +
Preference number: 1 (lower is better)
Translates to: LPQVHLAVTLSALKE*KLAGVIHHQELSQQ
Trigger: CTGCTGCGAAAGTTCTTGGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR CCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATT +
Preference number: 1 (lower is better)
Translates to: YTHRWTQGASYFAVL*AHSPSTGGPPCTLI
Trigger: AATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR GCA 90 bp GAGTACTTCTGCAGGATCTGGCGGAGGTGCTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTATGTAGTTCAGGCATGCTGAAGGCG +
Preference number: 1 (lower is better)
Translates to: EYFCRIWRRCSSSSR*RIRRKLCSSGMLKA
Trigger: CGCCTTCAGCATGCCTGAACTACATAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR TCA 90 bp GAACTTTCGCAGCAGGGCCTCAATGACTTCACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTTGACAGCATCCTTGGGCAGGTAAAA +
Preference number: 1 (lower is better)
Translates to: ELSQQGLNDFTCPCA*QHMQVLDSILGQVK
Trigger: TTTTACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGCGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR CCA 90 bp TGTACTGTGAGCCAGCACTCCCTGACCTCAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTT +
Preference number: 1 (lower is better)
Translates to: CTVSQHSLTSGCVRS*HCREKPRLFLNACL
Trigger: AAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAGGGAGTGCTGGCTCACAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR TCA 90 bp CTGCCTTATTCTGAGCACCCACCCTTAGCTCTGATAAGGATATCCTaGGACCACATTCAAGATCCAAAACCTTTCCTCATAGATGAGGGC +
Preference number: 1 (lower is better)
Translates to: LPYSEHPPLALIRIS*DHIQDPKPFLIDEG
Trigger: GCCCTCATCTATGAGGAAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGTGGGTGCTCAGAATAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR TCA 90 bp ACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCTGATAAGGATATCCTGAGACCACAT +
Preference number: 1 (lower is better)
Translates to: TVERNQDSSSMPALF*APTLSSDKDILRPH
Trigger: ATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GPTGPVTLTRHALGAACCALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: APLALSHSHGTHLALPAVLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: APLALSHSHGTHLALPAVMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CAA 90 bp ATTCCACAGGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGCCTTCCACCTGGGGGTACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: IPQAPLALSHSHGTH*ALPAVCLPPGGTRG
Trigger: ACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCCTGTGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR GCA 90 bp TTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCGCAGGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: FLQDKAQGLVTGPCQEPQARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...CTGCGGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CATTTTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: HFPSGQSSGPCHWALPGAHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...GGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CAA 90 bp TGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCG +
Preference number: 2 (lower is better)
Translates to: WGYKRSPKGAGVQGL*DLLAAIGVLLQDLA
Trigger: CGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR TCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCACACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACAGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCACTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEALHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: QGLLDLLAAIGVLLQDLAEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...CGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR GCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 2 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR TCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 2 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp CTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGGAGGTGCTGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LGSSGGNRSTSAGSGGGAAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...AGCACCTCCGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: YLATPTGGHREQATSLFSTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGAGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 2 (lower is better)
Translates to: EGRHPCKHDPVLFAGSPRVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...TCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR CCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACATACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCATACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR TCA 90 bp CAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 2 (lower is better)
Translates to: QGLLDLLAAIGVLLQDLAMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...CGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR TCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGCGCACCAGCTTCAGCTaGACCTTGATGAAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLRTSFS*TLMKPV
Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCG...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACACTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: WHCREKPRLFLNACLILSARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 2 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CCA 90 bp CTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGGAGGTGCTTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: LGSSGGNRSTSAGSGGGAYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...AGCACCTCCGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR TCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 2 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 2 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR CCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACAAGGTTGCTGTTGATCTaGGCATTGTACTCCTTGATC +
Preference number: 2 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTRLLLI*ALYSLI
Trigger: GATCAAGGAGTACAATGCCCAGATCAACAGCAACCT...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR TCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 2 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 2 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: WHCREKPRLFLNACLILSTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: VSKIFTSETKIEETSVCTPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPASALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CCA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: SETKIEETSVCTTPAAGLYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTACATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 2 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCATCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPASPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: WHCREKPRLFLNACLILSTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: IFTSETKIEETSVCTTPAALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: IFTSETKIEETSVCTTPAALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: VSKIFTSETKIEETSVCTALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCATACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTATCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 2 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 2 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR GCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: IFTSETKIEETSVCTTPACLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPALFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: IFTSETKIEETSVCTTPAVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 2 (lower is better)
Translates to: GTSSSYEALRHMLYCEPADILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR GCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR GCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTCATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 2 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 2 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR TCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: IFTSETKIEETSVCTTPALANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp GACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCGCAGCCGCAGGGGTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: DKAQGLVTGPCQEPQPQGSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...CCCCTGCGGCTGCGGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR GCA 72 bp GGCCCCGCCGGGCATCCTGCAAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAGGGCGCACCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: GPAGHPARRVAS*WRAQRQGAPAS
Trigger: TGAAGCTGGTGCGCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR CCA 72 bp AAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTaGGCCCCGCCGGGCATCCTGCAAGGAGGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: KGSAAPDTCAPS*APPGILQGGWL
Trigger: AAGCCACCCTCCTTGCAGGATGCCCGGCGGGGCCCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR CCA 72 bp CCCGCCGGGCATCCTGCAAGGAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGCGCACCAGCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: PAGHPARRVASC*RAQRQGAPASA
Trigger: AGCTGAAGCTGGTGCGCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR CCA 72 bp CACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTG +
Preference number: 3 (lower is better)
Translates to: HALGAACCLPST*GYKRSPKGAGV
Trigger: CACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR GCA 72 bp CACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACAAGAGGTCACCCAAGG +
Preference number: 3 (lower is better)
Translates to: HSHGTHLALPAV*LPPGGTRGHPR
Trigger: CCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CAA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACATCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR GCA 72 bp CCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGGGGGTACAAGAGGTCA +
Preference number: 3 (lower is better)
Translates to: PVTLTRHALGAA*CLPSTWGYKRS
Trigger: TGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR CCA 72 bp AGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGC +
Preference number: 3 (lower is better)
Translates to: RWTQGASYFAVL*AHSPSTGGPPC
Trigger: GCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCATCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEASHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CCA 72 bp CCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTaGCTACACCCACAGGTGGACACAGGGAGCAAGCTA +
Preference number: 3 (lower is better)
Translates to: PSNEGRGVQSHT*LHPQVDTGSKL
Trigger: TAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 3 (lower is better)
Translates to: GPTGPVTLTRHALGAACCMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR TCA 72 bp CACGTGCCCTTGTGCGTGACAGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGTAAAAGGAAGTGCGGC +
Preference number: 3 (lower is better)
Translates to: HVPLCVTAHAGA*QHPWAGKRKCG
Trigger: GCCGCACTTCCTTTTACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTCACGCACAAGGGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR TCA 72 bp CAGCAGGGCCTCAATGACTTCACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTTGACAGCATCCTTGGG +
Preference number: 3 (lower is better)
Translates to: QQGLNDFTCPCA*QHMQVLDSILG
Trigger: CCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR CAA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQSTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR GCA 72 bp GTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATCCACCACCAAGAACTT +
Preference number: 3 (lower is better)
Translates to: VHLAVTLSALKE*KLAGVIHHQEL
Trigger: AAGTTCTTGGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CAA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 3 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR TCA 72 bp CATCCACCACCAAGAACTTTCGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGCGTGACAGCACATGCA +
Preference number: 3 (lower is better)
Translates to: HPPPRTFAAGPQ*LHVPLCVTAHA
Trigger: TGCATGTGCTGTCACGCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGCGAAAGTTCTTGGTGGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR CAA 90 bp AGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: STGGPPCTLIPQAPLALSLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...TGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 3 (lower is better)
Translates to: SETKIEETSVCTTPAAGLKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR-3UTR CAA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CAA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 3 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR GCA 72 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTGTTTGCAGGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: PKPFLIDEGRHP*KHDPVLFAGSP
Trigger: TGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 3 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: IFTSETKIEETSVCTTPATKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CAA 90 bp AGGAAGTTATGTAGTTCAGGCATGCTGAAGGCGTCCCAGTTCACCTCCCCAGAGTGGGCATTGTACTCCTaGATCTTCTGCTCAATCTCA +
Preference number: 3 (lower is better)
Translates to: RKLCSSGMLKASQFTSPEWALYS*IFCSIS
Trigger: TGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCA...CTCTGGGGAGGTGAACTGGGACGCCTTCAGCATGCCTGAACTACATAACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
3UTR TCA 72 bp GCAGGATACGTAGGAAGTTATGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCTCCCCAGAGTCATTTT +
Preference number: 3 (lower is better)
Translates to: AGYVGSYVVQAC*RRPSSPPQSHF
Trigger: AAAATGACTCTGGGGAGGTGAACTGGGACGCCTTCAGCATGCCTGAACTACATAACTTCCTACGTATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
3UTR-3UTR CAA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 3 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 3 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR TCA 72 bp AGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCTGATAAGGATATCCTG +
Preference number: 3 (lower is better)
Translates to: RNQDSSSMPALF*APTLSSDKDIL
Trigger: CAGGATATCCTTATCAGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: WHCREKPRLFLNACLILSLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR TCA 72 bp TCTGAGCACCCACCCTTAGCTCTGATAAGGATATCCTaGGACCACATTCAAGATCCAAAACCTTTCCTCATA +
Preference number: 3 (lower is better)
Translates to: SEHPPLALIRIS*DHIQDPKPFLI
Trigger: TATGAGGAAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGTGGGTGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR-3UTR CAA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000359365.8
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCGCGGGCTGGAAGCGGTaGCCACGGCCAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVAGWKR*PRPGTS
Trigger: GCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGC...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCTGTCTGCCTTCCACCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCCGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCT +
Preference number: 4 (lower is better)
Translates to: AVCLPPGGTRGHPRGQACRCPAR*AARWHA
Trigger: AGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCG...GCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGCTGCCGTGTGGGGTTaGACGCGGTGCCCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLAAVWG*TRCPAR
Trigger: TCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCAGGGCCTCTTGGATCGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGTRGHPRGQACRASWIGPAAV*GCTRCP
Trigger: GGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCC...GATCCAAGAGGCCCTGCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCRKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCGGGCTGGAAGCGGTaGCCACGGCCAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLAGWKR*PRPGTS
Trigger: GCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGC...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCGCTGCCGTGTGGGGTTaGACGCGGTGCCCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASAAVWG*TRCPAR
Trigger: TCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGC...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATGCTGCCGTGTGGGGTTaGACGCGGTGCCCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHAAVWG*TRCPAR
Trigger: TCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGC...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCGGCCAGGGACCAGCTaGCGTGTGGGGTTGCACGCG +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTRPGTS*RVGLHA
Trigger: CGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLARRPR*SRHRGR
Trigger: GCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGGCTGCAGTAGCCACTaGTCGTCGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALGCSSH*SSCCSR
Trigger: CCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TGPVTLTRHALGAACCLPPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...AGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCAGGGCCTCTTGGATCGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: PGGTRGHPRGQACRASWIALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...GATCCAAGAGGCCCTGCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACCGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCT +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHRCPAR*AARWHA
Trigger: AGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCG...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCT +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPRCPAR*AARWHA
Trigger: AGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCG...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACATGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTWGCTR*PARCAA
Trigger: CGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCA...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGCGGCCAGGGACCAGCTaGCGTGTGGGGTTGCACGCG +
Preference number: 4 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQRPGTS*RVGLHA
Trigger: CGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCG...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCCGGCCAGGGACCAGCTaGCGTGTGGGGTTGCACGCG +
Preference number: 4 (lower is better)
Translates to: VHLAVTLSALKECKLAGVRPGTS*RVGLHA
Trigger: CGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCG...GACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTGAGAGGCGCGCGCACTaGAGGCCTTTGCGCACGACG +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTERRAH*RPLRTT
Trigger: CGTCGTGCGCAAAGGCCTGCAGTGCGCGCGCCTCTC...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGCTCGTCGCGCGCACTaGAGGCCTTTGCGCACGACG +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHARRAH*RPLRTT
Trigger: CGTCGTGCGCAAAGGCCTGCAGTGCGCGCGACGAGC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000616212.4
CDS-3UTR CCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGPVTLTRHALGAACCLPHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...AGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACCAGGCTCCCCCGACATaGCCCGGTTGGGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHQAPPT*PGWARA
Trigger: AGCACGGGCCCAACCGGGCCATGTCGGGGGAGCCTG...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTGGCAGGCTCCCCCGACATaGCCCGGTTGGGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ILGQVKGSAAPDTCAPSWQAPPT*PGWARA
Trigger: AGCACGGGCCCAACCGGGCCATGTCGGGGGAGCCTG...CCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILRCAAR*HAPAGC
Trigger: GCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCG...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTGGCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ILGQVKGSAAPDTCAPSWRCAAR*HAPAGC
Trigger: GCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCG...CCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp AGGAGCCGCAGCCGCAGGGGCTGCTCATCATCCAACAGCTTCCGCAAGTACACTCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSRSRRGCSSSNSFRKYTRCAAR*HAPAGC
Trigger: GCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCG...AGTGTACTTGCGGAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGCGGGCTGGAAGCGGTaGCCACGGCCAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHAGWKR*PRPGTS
Trigger: GCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCTCCCGCAGCTCAATaGGCTCAGGCTCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLAPAAQ*AQAPPT
Trigger: TGTCGGGGGAGCCTGAGCTCATTGAGCTGCGGGAGC...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCCAAGGGGGCAGGCGTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTAGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: PKGAGVQGLLDLLAAIGVARRPR*SRHRGR
Trigger: GCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGC...TACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAGCCCGGTTGGGCCCGTaGTTCGCTGGCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPARLGP*FAGFGR
Trigger: GCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGC...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATTCCACAGGCTCGTCCTaGTCCCGGCGCGGCCTGCGA +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHSTGSS*SRRGLR
Trigger: TCGCAGGCCGCGCCGGGACCAGGACGAGCCTGTGGA...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR CCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHGPAAV*GCTRCP
Trigger: GGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHGPAAV*GCTRCP
Trigger: GGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGGGGCCCGTGCTTCGCTaGCTTTGGGCGCTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLGPVLR*LWALAS
Trigger: GCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCC...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCGCACCAGCTTCAGCTaGACCTTGATGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCRTSFS*TLMKPV
Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCG...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILRKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHRKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATGCTCCCGCAGCTCAATaGGCTCAGGCTCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHAPAAQ*AQAPPT
Trigger: TGTCGGGGGAGCCTGAGCTCATTGAGCTGCGGGAGC...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTTGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSWGCTR*PARCAA
Trigger: CGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCA...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCTGCCGTGTGGGGTTaGACGCGGTGCCCCGCGCGA +
Preference number: 4 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLAAVWG*TRCPAR
Trigger: TCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGC...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGGGTGAACTTGCAATCTaGAGAGAGGCGCGCGCACTG +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALGELAI*REARAL
Trigger: CAGTGCGCGCGCCTCTCTGCAGATTGCAAGTTCACC...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS-3UTR CCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTCATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CATTTTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCCCGACATGGCCCGGTTaGGCCCGTGCTTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HFPSGQSSGPCHWALPGAPTWPG*ARASLA
Trigger: AGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGG...GGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATGCGGGCTGGAAGCGGTaGCCACGGCCAGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHAGWKR*PRPGTS
Trigger: GCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGC...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATGTGCTTCGCTGGCTTTaGGCGCTAGCAAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHVLRWL*ALASAG
Trigger: GCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCAC...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPRKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTRKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCAGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: STGGPPCTLIPQAPLALSAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...TGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: APLALSHSHGTHLALPAVSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTGCTCCCGCAGCTCAATaGGCTCAGGCTCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPAPAAQ*AQAPPT
Trigger: TGTCGGGGGAGCCTGAGCTCATTGAGCTGCGGGAGC...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPARRPR*SRHRGR
Trigger: GCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGC...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGCGCGCGGTGAAGTACTaGTCGAGCTCCGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQRAVKY*SSSESE
Trigger: CTCGGACTCGGAGCTCGAGCAGTACTTCACCGCGCG...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GCTGTCTGCCTTCCACCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AVCLPPGGTRGHPRGQACDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...GCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCCTCAATGACTTCACGTGCCCTTGTGCGTGACAGCACATGCAGGGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: RSRASMTSRALVRDSTCRALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...CCTGCATGTGCTGTCACGCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGGAAGTTATGTAGTTCAGGCATGCTGAAGGCGTCCCAGTTCACCTCCCCAGAGTGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RKLCSSGMLKASQFTSPEWGCTR*PARCAA
Trigger: CGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCA...CTCTGGGGAGGTGAACTGGGACGCCTTCAGCATGCCTGAACTACATAACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTCAGGCTCCCCCGACATaGCCCGGTTGGGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: YLATPTGGHREQATSLFSQAPPT*PGWARA
Trigger: AGCACGGGCCCAACCGGGCCATGTCGGGGGAGCCTG...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSRCAAR*HAPAGC
Trigger: GCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCG...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQGPAAV*GCTRCP
Trigger: GGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCC...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGTGCTTCGCTGGCTTTaGGCGCTAGCAAGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTVLRWL*ALASAG
Trigger: GCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCAC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
3UTR CAA 72 bp CCAGAGTCATTTTCCTTCAGGACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGGAGCCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PESFSFRTKLRA*SLGPARSRSRR
Trigger: CCTGCGGCTGCGGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAAAATGACTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QGLLDLLAAIGVLLQDLAPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...CGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp ACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TGPVTLTRHALGAACCLPSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...AGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTGGCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILGQVKGSAAPDTCAPSWRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...CCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTGGTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ILGQVKGSAAPDTCAPSWCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...CCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp TTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCATCCACTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LAVTLSALKECKLAGVIHCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...GTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTTGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPWGCTR*PARCAA
Trigger: CGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCA...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTGCTCGTCGCGCGCACTaGAGGCCTTTGCGCACGACG +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSARRAH*RPLRTT
Trigger: CGTCGTGCGCAAAGGCCTGCAGTGCGCGCGACGAGC...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000616212.4
CDS-3UTR CCA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATTGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHCLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCCAAGGGGGCAGGCGTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTATGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PKGAGVQGLLDLLAAIGVCLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...TACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCGCAGGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FLQDKAQGLVTGPCQEPQVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...CTGCGGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATGCGAGGTTCGCGCGGTaGAGTACTGCTCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHARFAR*STARAP
Trigger: CGGAGCTCGAGCAGTACTTCACCGCGCGAACCTCGC...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR TCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCGCACCAGCTTCAGCTaGACCTTGATGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTRTSFS*TLMKPV
Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGAGCCGCAGCCGCAGGGGCTGCTCATCATCCAACAGCTTCCGCAAGTACACTGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSRSRRGCSSSNSFRKYTAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...AGTGTACTTGCGGAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAGCTCCCGCAGCTCAATaGGCTCAGGCTCCCCCGACA +
Preference number: 4 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAAPAAQ*AQAPPT
Trigger: TGTCGGGGGAGCCTGAGCTCATTGAGCTGCGGGAGC...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHARRPR*SRHRGR
Trigger: GCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGC...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAGGTCCCGGCGCGGCCTaGGAGCTAGCGAGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAGPGAA*ELARFA
Trigger: CGCGAACCTCGCTAGCTCGCAGGCCGCGCCGGGACC...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp GTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: VHLAVTLSALKECKLAGVRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...GACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGAGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EGRHPCKHDPVLFAGSPRALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...TCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATGCAGGTGCTTGACAGCATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACGCACTTGGCGCTGCCTaGTGTCTGCCTTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: MQVLDSILGQVKGSAAPDALGAA*CLPSTW
Trigger: CCAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGC...GTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGATGCTGTCAAGCACCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTLHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCGCCCGGTTGGGCCCGTaGTTCGCTGGCTTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFARLGP*FAGFGR
Trigger: GCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGC...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGTGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWCLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAACACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACGTGCAGAGCCATACCTaGCTACACCCACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHVQSHT*LHPQVD
Trigger: GTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCAC...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GCTGTCTGCCTTCCACCTGGGGGTACAAGAGGTCACCCAAGGGGGCAGGCGTGCGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: AVCLPPGGTRGHPRGQACGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...GCACGCCTGCCCCCTTGGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGCGCACCAGCTTCAGCTaGACCTTGATGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWRTSFS*TLMKPV
Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCG...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACAGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: GPTGPVTLTRHALGAACCDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGCTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATCCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GGGTCATCCACCACCAAGAACTTTCGCAGCAGGGCCTCAATGACTTCACGTGCCCTGCACCACTCCTGCTaGAGGCCTGGAGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSTTKNFRSRASMTSRALHHSC*RPGAAS
Trigger: AGAAGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAG...GGCACGTGAAGTCATTGAGGCCCTGCTGCGAAAGTTCTTGGTGGTGGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGAGGGCCGTCACCCCTaGAAACATGACCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHEGRHP*KHDPVL
Trigger: CAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LALSHSHGTHLALPAVCLLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACATGAACCTGGGCCAGTaGCCACATTCACACAGACCC +
Preference number: 4 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHMNLGQ*PHSHRP
Trigger: GGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACATGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTCLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCATGCTCAATCTCAGCTTaGGAAAGGTCAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: STGGPPCTLIPQAPLALSCSISA*ERSGVS
Trigger: GGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCA...TGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACACGCACCAGCTTCAGCTaGACCTTGATGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTRTSFS*TLMKPV
Trigger: CACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCG...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPVVQAC*RRPSSP
Trigger: AGGTGAACTGGGACGCCTTCAGCATGCCTGAACTAC...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHVVQAC*RRPSSP
Trigger: AGGTGAACTGGGACGCCTTCAGCATGCCTGAACTAC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCCCCGTCCCCCAGTCCTaGGCGTCCGTAGCCGCCAAC +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSPVPQS*ASVAAN
Trigger: GTTGGCGGCTACGGACGCGCAGGACTGGGGGACGGG...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATCACTGCTCGTCGTGCTaGTCCAGGTCATTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHHCSSC*SRSFRK
Trigger: CTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTG...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTAGCGCGCTCAAAGAGTaGAAACTTGCGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPSALKE*KLAGVI
Trigger: GATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCT...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTAGGATCTGGCGGAGGTaGTCCTCCTCCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPRIWRR*SSSSRC
Trigger: GCAGCGGGAGGAGGAGGAGCACCTCCGCCAGATCCT...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GGGCACAGAGACAGGGCGCACCAGCTTCAGCTGAACCTTGATGAAGCCTGTGTAACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GHRDRAHQLQLNLDEACVTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...TACACAGGCTTCATCAAGGTTCAGCTGAAGCTGGTGCGCCCTGTCTCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAATGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: STGGPPCTLIPQAPLALSLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...TGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AAGCTCATGAAGAGGTTGCTGTTGATCTGGGCATTGTACTCCTTGATCTTCTGCCGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCT +
Preference number: 4 (lower is better)
Translates to: KLMKRLLLIWALYSLIFCRCPAR*AARWHA
Trigger: AGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCG...GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAGCAACCTCTTCATGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp CAGCTTCCGCAAGTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAATACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLPQVHLAVTLSALKECKYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...TTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CCA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGACATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EGRHPCKHDPVLFAGSPRHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...TCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTACAGGCTCCCCCGACATaGCCCGGTTGGGCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLQAPPT*PGWARA
Trigger: AGCACGGGCCCAACCGGGCCATGTCGGGGGAGCCTG...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGGGCCCGTGCTTCGCTaGCTTTGGGCGCTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVGPVLR*LWALAS
Trigger: GCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATAAGTACACTTGGCCGTaGCGCTCAGCGCGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHKYTWP*RSARSK
Trigger: CTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTACTT...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCGCGCTGCCTGCTGTCTaGCTTCCACCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFALPAV*LPPGGT
Trigger: TGTACCCCCAGGTGGAAGGCAGACAGCAGGCAGCGC...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTATGAGGGCAGAGGGGTaGAGAGCCATACCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSMRAEG*RAIPGY
Trigger: GTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCAT...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTGCAGGGCCTCTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGAGGAGACTTCTGTCTaGACCACTCCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VQGLLDLLAAIGVLLQDLEETSV*TTPAAG
Trigger: GCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTC...CAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAGAGGCCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTCCTTGTTGCGCGCACTaGAGGCCTTTGCGCACGACG +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPPCCAH*RPLRTT
Trigger: CGTCGTGCGCAAAGGCCTGCAGTGCGCGCAACAAGG...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482447.1
CDS-3UTR CCA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTACCGACATGGCCCGGTTaGGCCCGTGCTTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLPTWPG*ARASLA
Trigger: AGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGG...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCCGACATGGCCCGGTTaGGCCCGTGCTTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNPTWPG*ARASLA
Trigger: AGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCGGCCACCTGGGCGTCTaGAAACCGGCCGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSGHLGV*KPAGRP
Trigger: TGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCC...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395126.7
CDS-3UTR TCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACATGCTCAATCTCAGCTTaGGAAAGGTCAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTCSISA*ERSGVS
Trigger: GGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCA...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATTGCTCAATCTCAGCTTaGGAAAGGTCAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHCSISA*ERSGVS
Trigger: GGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCA...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: YLATPTGGHREQATSLFSVVQAC*RRPSSP
Trigger: AGGTGAACTGGGACGCCTTCAGCATGCCTGAACTAC...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHVVQAC*RRPSSP
Trigger: AGGTGAACTGGGACGCCTTCAGCATGCCTGAACTAC...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: YLATPTGGHREQATSLFSTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCCGAGTCCTCTTGGCTaGAGTAGCCACTGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVPSPLG*SSHCSS
Trigger: CGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGG...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTCTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 4 (lower is better)
Translates to: YLATPTGGHREQATSLFSLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGCGCAGCCGCAGGGGCTaGTCATCATCCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: SETKIEETSVCTTPAAGLRSRRG*SSSNSF
Trigger: GAAGCTGTTGGATGATGAGCAGCCCCTGCGGCTGCG...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATTTTCCTTCAGGACAAAGCTCAGGGCCTTGTCACTGGGCCCTGCCAGGAGCCCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: HFPSGQSSGPCHWALPGALFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...GGCTCCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGTCCTGAAGGAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTATGAACCTGGGCCAGTaGCCACATTCACACAGACCC +
Preference number: 4 (lower is better)
Translates to: YLATPTGGHREQATSLFSMNLGQ*PHSHRP
Trigger: GGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAAAGAACCGTCCTTGTTaGGCGCACTGCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQKNRPC*AHCRPL
Trigger: CAAAGGCCTGCAGTGCGCGCAACAAGGACGGTTCTT...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482447.1
CDS-3UTR CCA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATAGGTTGCTGTTGATCTaGGCATTGTACTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHRLLLI*ALYSLI
Trigger: GATCAAGGAGTACAATGCCCAGATCAACAGCAACCT...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GGGTCATCCACCACCAAGAACTTTCGCAGCAGGGCCTCAATGACTTCACGTGCCTACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GSSTTKNFRSRASMTSRAYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...GGCACGTGAAGTCATTGAGGCCCTGCTGCGAAAGTTCTTGGTGGTGGATGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACAGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAAAGGAAGTGCGGCGCCTaGCACTTGTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: QLNLDEACVRTVLVQAHERKCGA*HLCPVL
Trigger: CAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCT...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR TCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGRHPCKHDPVLFAGSPRLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...TCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SETKIEETSVCTTPAAGLRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CATACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: HTWLHPQVDTGSKLLRCSSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...AGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTACCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SETKIEETSVCTTPAAGLTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTACAGGAGGGCCTCCATaGACACTCATTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCTGGPP*TLIPQA
Trigger: GGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGT...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCCGGCCAGGGACCAGCTaGCGTGTGGGGTTGCACGCG +
Preference number: 4 (lower is better)
Translates to: VSKIFTSETKIEETSVCTRPGTS*RVGLHA
Trigger: CGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCG...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATCCTTGGGCAGGTAAAAGGAAGTGCGGCGCCTGACACTTGTGCCCCGTCCTGGAGGTTGCTGTTGATCTaGGCATTGTACTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: ILGQVKGSAAPDTCAPSWRLLLI*ALYSLI
Trigger: GATCAAGGAGTACAATGCCCAGATCAACAGCAACCT...CCAGGACGGGGCACAAGTGTCAGGCGCCGCACTTCCTTTTACCTGCCCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTTACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAACACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLNLDEACVRTVLVQAHEHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCATACTTCGCTGTTCTCTaGGCTCATTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAYFAVL*AHSPST
Trigger: TGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACGCACATGCAGGTGCTTaGCAGCATCCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSYEALRHMLYCEPALPDAHAGA*QHPWAG
Trigger: ACCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGC...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAGCAGCAGGGCCTCAATaGCTTCACGTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLAAGPQ*LHVPLC
Trigger: GCACAAGGGCACGTGAAGTCATTGAGGCCCTGCTGC...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGAAGTTATGTAGTTCAGGCATGCTGAAGGCGTCCCAGTTCACCTCCCCAGAGTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKLCSSGMLKASQFTSPESPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...CTCTGGGGAGGTGAACTGGGACGCCTTCAGCATGCCTGAACTACATAACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GTACACTTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: VHLAVTLSALKECKLAGVLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...GACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR TCA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGGTATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: RYEPGPVPTFTQTLAQGHDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...ATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTTGGATCTTCTGGCGGCAATAGGAGTACTTCTGCAGGATCTGGCGGAGGTGCTTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LGSSGGNRSTSAGSGGGALANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...AGCACCTCCGCCAGATCCTGCAGAAGTACTCCTATTGCCGCCAGAAGATCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGGAAGTTATGTAGTTCAGGCATGCTGAAGGCGTCCCAGTTCACCTCCCCAGAGTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: RKLCSSGMLKASQFTSPESSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...CTCTGGGGAGGTGAACTGGGACGCCTTCAGCATGCCTGAACTACATAACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR GCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTATGAACCTGGGCCAGTaGCCACATTCACACAGACCC +
Preference number: 4 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCMNLGQ*PHSHRP
Trigger: GGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAAGGTTGCTGTTGATCTaGGCATTGTACTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTRLLLI*ALYSLI
Trigger: GATCAAGGAGTACAATGCCCAGATCAACAGCAACCT...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTCCGACATGGCCCGGTTaGGCCCGTGCTTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IFTSETKIEETSVCTTPAPTWPG*ARASLA
Trigger: AGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGG...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACACACTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: NEGRGVQSHTWLHPQVDTLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...TGTGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CCTGGCCCAGGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: PGPGTSSSYEALRHMLYCQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...ACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCCTGGGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACAGCCACTGCTCGTCGTaGTGCTCCAGGTCATTTCGA +
Preference number: 4 (lower is better)
Translates to: SSYEALRHMLYCEPALPDSHCSS*CSRSFR
Trigger: TCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCT...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR GCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCAGGAGGGTGGCTTCTTaGTGGAGGGCACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSRRVAS*WRAQRQ
Trigger: CTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCT...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAACCCCGCCGGGCATCCTaGAAGGAGGGTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQPRRAS*KEGGFL
Trigger: CAAGAAGCCACCCTCCTTGCAGGATGCCCGGCGGGG...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACCTTCACGTGCCCTTGTaGGTGACAGCACATGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSYEALRHMLYCEPALPDLHVPL*VTAHAG
Trigger: ACCTGCATGTGCTGTCACGCACAAGGGCACGTGAAG...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATTACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCTACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTATGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLCLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAACACACGGCACGCACTTaGCGCTGCCTGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQHTART*RCLLSA
Trigger: GGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTG...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCTGCTCAATCTCAGCTTaGGAAAGGTCAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFCSISA*ERSGVS
Trigger: GGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCA...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAGTAGTTCAGGCATGCTaGAGGCGTCCCAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLVVQAC*RRPSSP
Trigger: AGGTGAACTGGGACGCCTTCAGCATGCCTGAACTAC...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GATCCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTTTAGCAAATAAGGTATaGACCTGGGCCAGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: DPKPFLIDEGRHPCKHDPLANKV*TWASAH
Trigger: GTGGGCACTGGCCCAGGTTCATACCTTATTTGCTAA...AGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACCAGGAGGCATTCAGCTaGGGCCACCACACATTACAT +
Preference number: 4 (lower is better)
Translates to: SSYEALRHMLYCEPALPDQEAFS*GHHTLH
Trigger: ATGTAATGTGTGGTGGCCTCAGCTGAATGCCTCCTG...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACTCCTCCTCCTCCCGCTaGAGGATACGTAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: SSYEALRHMLYCEPALPDSSSSR*RIRRKL
Trigger: TAACTTCCTACGTATCCTGCAGCGGGAGGAGGAGGA...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAACCAAGGGGGCAGGCGTaGAGGGCCTCTTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQPRGQA*RASWIF
Trigger: GAAGATCCAAGAGGCCCTGCACGCCTGCCCCCTTGG...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCACGCACTTGGCGCTaGCTGCTGTCTGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IFTSETKIEETSVCTTPAARTWR*LLSAFH
Trigger: GTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGC...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATATGAACCTGGGCCAGTaGCCACATTCACACAGACCC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNMNLGQ*PHSHRP
Trigger: GGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCACTTGCAATCTCACACTaGTACGCGGACTCTAATGTT +
Preference number: 4 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEALAISH*YADSNV
Trigger: AACATTAGAGTCCGCGTAGCAGTGTGAGATTGCAAG...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395126.7
CDS-3UTR CCA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAACATTCACACAGACCCTaGCCCAGGGACATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QLNLDEACVRTVLVQAHEHSHRP*PRDILL
Trigger: GAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATG...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR TCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCTCACCCCTGCAAACATaGCCCTGTTCTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSSPLQT*PCSVCR
Trigger: CCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGA...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCATGCCTGCCTTATTCTaGGCACCCACCCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSMPALF*APTLSS
Trigger: AGAGCTAAGGGTGGGTGCTCAGAATAAGGCAGGCAT...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAAGCGGTAGTGGCAGGTaGACTTGCAATCTCACACTG +
Preference number: 4 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLSGSGR*TCNLTL
Trigger: CAGTGTGAGATTGCAAGTTCACCTGCCACTACCGCT...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395126.7
CDS-3UTR GCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCTGTCTGCACCACTCCTaGTGCAGGCCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSKIFTSETKIEETSVCTCLHHS*CRPGAA
Trigger: AGCTGCTCCAGGCCTGCAGCAGGAGTGGTGCAGACA...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCAGGGTGGCTTCTTGCTaGAGGGCACAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: VSKIFTSETKIEETSVCTRVASC*RAQRQG
Trigger: GCCCTGTCTCTGTGCCCTCCAGCAAGAAGCCACCCT...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAGGGTGTGTGAGGAGTTaGCACTGTAGAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAGCVRS*HCREKP
Trigger: TGGTTTCTCTCTACAGTGCCAACTCCTCACACACCC...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTCTAATGTTGGCCACCTaGGCGTCTGGAAACCGGCCG +
Preference number: 4 (lower is better)
Translates to: IFTSETKIEETSVCTTPALMLAT*ASGNRP
Trigger: CGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAG...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395126.7
CDS-3UTR TCA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR TCA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGACATCCTCCTCATATaGAGCATTAAGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVDILLI*SIKAHA
Trigger: AGCATGTGCCTTAATGCTTCATATGAGGAGGATGTC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCCTCTTCCTCAATGCCTaGCTTATTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: WHCREKPRLFLNACLILSLFLNA*LILSTH
Trigger: GTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAG...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGAGGTTGCTGTTGATCTaGGCATTGTACTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SETKIEETSVCTTPAAGLRLLLI*ALYSLI
Trigger: GATCAAGGAGTACAATGCCCAGATCAACAGCAACCT...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CCA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAATACTTCTGCAGGATCTaGCGGAGGTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQYFCRI*RRCSSS
Trigger: GGAGGAGGAGCACCTCCGCCAGATCCTGCAGAAGTA...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CCA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTTGTCTGCCTTCCACCTaGGGGTACAAGAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: IFTSETKIEETSVCTTPACLPST*GYKRSP
Trigger: GGGTGACCTCTTGTACCCCCAGGTGGAAGGCAGACA...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTACGTGCCCTTGTGCGTaGCAGCACATGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFTCPCA*QHMQVL
Trigger: AAGCACCTGCATGTGCTGTCACGCACAAGGGCACGT...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp GTCTCCAAGATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACCTTTCCTCATAGATaGGGGCCGTCACCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VSKIFTSETKIEETSVCTTFPHR*GPSPLQ
Trigger: TTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGT...GGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAATCTTGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CTGACCTCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTGATAAGGATATCCTaGGACCACATTCAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LTSGCVRSWHCREKPRLFLIRIS*DHIQDP
Trigger: TGGATCTTGAATGTGGTCTCAGGATATCCTTATCAG...GAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGAGGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAAGACAGCACATGCAGGTaGTTGACAGCATCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQDSTCR*LTASLG
Trigger: GCCCAAGGATGCTGTCAAGCACCTGCATGTGCTGTC...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR TCA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAAGGGCATTGTACTCCTTaGTCTTCTGCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: QLNLDEACVRTVLVQAHEGHCTP*SSAQSQ
Trigger: CTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCC...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR GCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTGTGCGTGACAGCACATaGAGGTGCTTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFVRDST*RCLTAS
Trigger: GGATGCTGTCAAGCACCTGCATGTGCTGTCACGCAC...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR GCA 90 bp ACCCTTAGCTCTGATAAGGATATCCTGAGACCACATTCAAGATCCAAAACCTTTATGAACCTGGGCCAGTaGCCACATTCACACAGACCC +
Preference number: 4 (lower is better)
Translates to: TLSSDKDILRPHSRSKTFMNLGQ*PHSHRP
Trigger: GGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT...AAAGGTTTTGGATCTTGAATGTGGTCTCAGGATATCCTTATCAGAGCTAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
3UTR CAA 72 bp GAACCGTCCTTGTTCAAGCTCATGAAGAGGTTGCTGTaGATCTGGGCATTGTACTCCTTGATCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EPSLFKLMKRLL*IWALYSLIFCS
Trigger: TGAGCAGAAGATCAAGGAGTACAATGCCCAGATCAACAGCAACCTCTTCATGAGCTTGAACAAGGACGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS CCA 90 bp GCCGTGTGGGGTTGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGCGGCCCTTCCCAGCGCGCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: AVWGCTRCPARCAAR*HAPAGCGPSQRAQR
Trigger: CCGCTGGGCGCGCTGGGAAGGGCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS GCA 90 bp GGTGGCCACGGCCAGGGACCAGCTGCCGTGTGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCGCGTTGGCACGCTCCAGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GGHGQGPAAVWGCTR*PARCAARWHAPAGC
Trigger: GCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp CCGCGGGCTGGAAGCGGTGGCCACGGCCAGGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: PRAGSGGHGQGPAAV*GCTRCPARCAARWH
Trigger: GTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp CGGGGGCGGGTGCCAGCGTCCGGGCAAGCGCACAAGAGTGGCCTCTaGCCGGAGGCGAGGGCGGGAAGGTGCGGGAAGTGCGCGTGCGCG +
Preference number: 5 (lower is better)
Translates to: RGRVPASGQAHKSGL*PEARAGRCGKCACA
Trigger: CGCGCACGCGCACTTCCCGCACCTTCCCGCCCTCGCCTCCGGCCAGAGGCCACTCTTGTGCGCTTGCCCGGACGCTGGCACCCGCCCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS GCA 90 bp GTCCTGCGCGTCCGTAGCCGCCAACCACCGCCCCGGTCGCGTGCGTaGGTGTACGCGTGTCAGTGTGCGCGTGCGCCCGGGCCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: VLRVRSRQPPPRSRA*VYACQCARAPGPEP
Trigger: CGGCTCTGGCCCGGGCGCACGCGCACACTGACACGCGTACACGCACGCACGCGACCGGGGCGGTGGTTGGCGGCTACGGACGCGCAGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 90 bp CAGGGACCAGCTGCCGTGTGGGGTTGCACGCGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCTCCAGCCGGGTGCGGCCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QGPAAVWGCTRCPAR*AARWHAPAGCGPSQ
Trigger: CTGGGAAGGGCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp AGGTCGCACCACGTGTGCGTGGCGGGCCCCGCGGGCTGGAAGCGGTaGCCACGGCCAGGGACCAGCTGCCGTGTGGGGTTGCACGCGGTG +
Preference number: 5 (lower is better)
Translates to: RSHHVCVAGPAGWKR*PRPGTSCRVGLHAV
Trigger: CACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGCGGGGCCCGCCACGCACACGTGGTGCGACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp GAGCTCAGGCTCCCCCGACATGGCCCGGTTGGGCCCGTGCTTCGCTaGCTTTGGGCGCTAGCAAGCGCGGGCCGGGCGGGGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: ELRLPRHGPVGPVLR*LWALASAGRAGPQG
Trigger: GCCCTGTGGCCCCGCCCGGCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGGGGAGCCTGAGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000482447.1
ENST00000616212.4
CDS GCA 90 bp GGCACGCTCCAGCCGGGTGCGGCCCTTCCCAGCGCGCCCAGCGGGTaGCAGCTCCCGCAGCTCAATGAGCTCAGGCTCCCCCGACATGGC +
Preference number: 5 (lower is better)
Translates to: GTLQPGAALPSAPSG*QLPQLNELRLPRHG
Trigger: GCCATGTCGGGGGAGCCTGAGCTCATTGAGCTGCGGGAGCTGGCACCCGCTGGGCGCGCTGGGAAGGGCCGCACCCGGCTGGAGCGTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp TCGCCACAGAGGTCGCACCACGTGTGCGTGGCGGGCCCCGCGGGCTaGAAGCGGTGGCCACGGCCAGGGACCAGCTGCCGTGTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SPQRSHHVCVAGPAG*KRWPRPGTSCRVGL
Trigger: CAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGCGGGGCCCGCCACGCACACGTGGTGCGACCTCTGTGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 90 bp GCGCGGAGCCTGGGTCAGCCTGGGCCCGGGTCCGCTTGCAGCGGGTaGAGTACTTGCGGAGCCGGCAATCCAGGCTCCCCTCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ARSLGQPGPGSACSG*STCGAGNPGSPPSP
Trigger: GGGGCTGGGAGGGGAGCCTGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CCA 90 bp GCGGGAAGGTGCGGGAAGTGCGCGTGCGCGGAGCCTGGGTCAGCCTaGGCCCGGGTCCGCTTGCAGCGGGTGGAGTACTTGCGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: AGRCGKCACAEPGSA*ARVRLQRVEYLRSR
Trigger: CCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACTTCCCGCACCTTCCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS GCA 90 bp GCGCGCGGCACCCAGGCAGCCCTCGAGAATGCCTGCACTGTGGCCTaGCCATCCTCGCCCTTCCCATACGCCCTCGGCCCCGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: ARGTQAALENACTVA*PSSPFPYALGPALT
Trigger: GGTGAGCGCGGGGCCGAGGGCGTATGGGAAGGGCGAGGATGGGCAGGCCACAGTGCAGGCATTCTCGAGGGCTGCCTGGGTGCCGCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CCA 90 bp GGAGGCGAGGGCGGGAAGGTGCGGGAAGTGCGCGTGCGCGGAGCCTaGGTCAGCCTGGGCCCGGGTCCGCTTGCAGCGGGTGGAGTACTT +
Preference number: 5 (lower is better)
Translates to: GGEGGKVREVRVRGA*VSLGPGPLAAGGVL
Trigger: AAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACTTCCCGCACCTTCCCGCCCTCGCCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS GCA 90 bp AGTGCGCGTGCGCGGAGCCTGGGTCAGCCTGGGCCCGGGTCCGCTTaGAGCGGGTGGAGTACTTGCGGAGCCGGCAATCCAGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SARARSLGQPGPGSA*SGWSTCGAGNPGSP
Trigger: AGGGGAGCCTGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS TCA 90 bp CAGAGAGGCGCGCGCACTGCAGGCCTTTGCGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGCACCACGTGTGCGTGGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: QRGARTAGLCARRPR*SRHRGRTTCAWRAP
Trigger: CGGGGCCCGCCACGCACACGTGGTGCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCGCCTCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS TCA 90 bp AGGCTCGTCGCGCGCACTGCAGGCCTTTGCGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGCACCACGTGTGCGTGGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: RLVARTAGLCARRPR*SRHRGRTTCAWRAP
Trigger: CGGGGCCCGCCACGCACACGTGGTGCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCGACGAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000616212.4
CDS GCA 90 bp ACCGCCCCGGTCGCGTGCGTGCGTGTACGCGTGTCAGTGTGCGCGTaGGCCCGGGCCAGAGCCGCGCCGCAACCGTTAAGACTGAAACGT +
Preference number: 5 (lower is better)
Translates to: TAPVACVRVRVSVCA*ARARAAPQPLRLKR
Trigger: ACGTTTCAGTCTTAACGGTTGCGGCGCGGCTCTGGCCCGGGCGCACGCGCACACTGACACGCGTACACGCACGCACGCGACCGGGGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 90 bp GAGCTCCACTCACAGACCCCACCTACCACAGGGAACGGGGGCGGGTaGCAGCGTCCGGGCAAGCGCACAAGAGTGGCCTCTGGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ELHSQTPPTTGNGGG*QRPGKRTRVASGRR
Trigger: CCTCCGGCCAGAGGCCACTCTTGTGCGCTTGCCCGGACGCTGGCACCCGCCCCCGTTCCCTGTGGTAGGTGGGGTCTGTGAGTGGAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS-3UTR CAA 90 bp CCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTCCCGACATGGCCCGGTaGGGCCCGTGCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: PQHRRASMHTHSTGPTGPPDMAR*GPCFAG
Trigger: GCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGG...AGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS TCA 90 bp GTCCTTGTTGCGCGCACTGCAGGCCTTTGCGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGCACCACGTGTGCGTGGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: VLVARTAGLCARRPR*SRHRGRTTCAWRAP
Trigger: CGGGGCCCGCCACGCACACGTGGTGCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCAACAAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482447.1
CDS GCA 90 bp AGAACGCTCCTTGCGCGCGGCACCCAGGCAGCCCTCGAGAATGCCTaGACTGTGGCCTGCCCATCCTCGCCCTTCCCATACGCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: RTLLARGTQAALENA*TVACPSSPFPYALG
Trigger: GCCGAGGGCGTATGGGAAGGGCGAGGATGGGCAGGCCACAGTGCAGGCATTCTCGAGGGCTGCCTGGGTGCCGCGCGCAAGGAGCGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS-3UTR CAA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: LALSHSHGTHLALPAVCLAMRSA*ARSSRV
Trigger: CACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGC...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS TCA 90 bp CGTCCTGGTCCCGGCGCGGCCTGCGAGCTAGCGAGGTTCGCGCGGTaGAGTACTGCTCGAGCTCCGAGTCCGAGTCCTCTTGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RPGPGAACELARFAR*STARAPSPSPLGCS
Trigger: ACTGCAGCCAAGAGGACTCGGACTCGGAGCTCGAGCAGTACTTCACCGCGCGAACCTCGCTAGCTCGCAGGCCGCGCCGGGACCAGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS TCA 90 bp ACTTGCAATGCGCGCACTGCAGGCCTTTGCGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGCACCACGTGTGCGTGGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: TCNARTAGLCARRPR*SRHRGRTTCAWRAP
Trigger: CGGGGCCCGCCACGCACACGTGGTGCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCATTGCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359365.9
ENST00000478619.1
ENST00000488024.1
CDS TCA 90 bp CCACCTGGTCCCGGCGCGGCCTGCGAGCTAGCGAGGTTCGCGCGGTaGAGTACTGCTCGAGCTCCGAGTCCGAGTCCTCTTGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PPGPGAACELARFAR*STARAPSPSPLGCS
Trigger: ACTGCAGCCAAGAGGACTCGGACTCGGAGCTCGAGCAGTACTTCACCGCGCGAACCTCGCTAGCTCGCAGGCCGCGCCGGGACCAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS-3UTR CAA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGAGCTGCCGTGTGGGGTaGCACGCGGTGCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWSCRVG*HAVPRA
Trigger: CGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCT...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCATCCACAGCTGCCGTGTGGGGTaGCACGCGGTGCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: LAVTLSALKECKLAGVIHSCRVG*HAVPRA
Trigger: CGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCT...GTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CAA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACAGCTGCCGTGTGGGGTaGCACGCGGTGCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHSCRVG*HAVPRA
Trigger: CGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCT...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGCGTGCTTCGCTGGCTTaGGGCGCTAGCAAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALRASLA*GASKRG
Trigger: CCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACG...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWAMRSA*ARSSRV
Trigger: CACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGC...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQAMRSA*ARSSRV
Trigger: CACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGC...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS TCA 90 bp CGCAACAGTCCAGGCAGACGAGCGCGCGGCAGCGGTAGTGGCAGGTaGACTTGCAATCTGCAGAGAGGCGCGCGCACTGCAGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RNSPGRRARGSGSGR*TCNLQRGARTAGLC
Trigger: GCAAAGGCCTGCAGTGCGCGCGCCTCTCTGCAGATTGCAAGTTCACCTGCCACTACCGCTGCCGCGCGCTCGTCTGCCTGGACTGTTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS-3UTR CAA 90 bp CTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: LALSHSHGTHLALPAVCLSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...AAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: APLALSHSHGTHLALPAVKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS GCA 90 bp GCTCCGAGTCCGAGTCCTCTTGGCTGCAGTAGCCACTGCTCGTCGTaGTGCTCCAGGTCATTTCGAAAGAAGGCGCCTCCGCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: APSPSPLGCSSHCSS*CSRSFRKKAPPPRP
Trigger: TGGGCGAGGCGGAGGCGCCTTCTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGGACTCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS-3UTR CAA 90 bp GCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: APLALSHSHGTHLALPAVSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...GACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGCTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLLPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCAGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEAAMRSA*ARSSRV
Trigger: CACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGC...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGAHCRP*RTTPQM
Trigger: CATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGC...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCCGTGCTTCGCTGGCTTaGGGCGCTAGCAAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: WLHPQVDTGSKLLRCSLGRASLA*GASKRG
Trigger: CCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACG...GCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp ACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: TGPVTLTRHALGAACCLPKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...AGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCATCCACACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAVTLSALKECKLAGVIHTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...GTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CAA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGAGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: EGRHPCKHDPVLFAGSPRAHCRP*RTTPQM
Trigger: CATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGC...TCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS GCA 90 bp ACTGCTCGAGCTCCGAGTCCGAGTCCTCTTGGCTGCAGTAGCCACTaGTCGTCGTGCTGCTCCAGGTCATTTCGAAAGAAGGCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: TARAPSPSPLGCSSH*SSCCSRSFRKKAPP
Trigger: CGGAGGCGCCTTCTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGGACTCGGAGCTCGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS CCA 90 bp ATCTCACACTGCTACGCGGACTCTAATGTTGGCCACCTGGGCGTCTaGAAACCGGCCGGAAGGCCACAGGCAGAGAGGCCTGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: ISHCYADSNVGHLGV*KPAGRPQAERPAQQ
Trigger: CTGTTGAGCAGGCCTCTCTGCCTGTGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCAGTGTGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS-3UTR CAA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp AGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCAAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: STGGPPCTLIPQAPLALSSTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...TGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: YEPGPVPTFTQTLAQGHPLPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...AGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: FSGLIPPAQEGLHAHSFHTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...GTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: YLATPTGGHREQATSLFSAHCRP*RTTPQM
Trigger: CATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGC...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGACGCGGACTCTAATGTaGGCCACCTGGGCGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LWAHSPSTGGPPCTLIPQTRTLM*ATWASG
Trigger: TCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGT...CTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395126.7
CDS CCA 90 bp AACTTGCAATCTCACACTGCTACGCGGACTCTAATGTTGGCCACCTaGGCGTCTGGAAACCGGCCGGAAGGCCACAGGCAGAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: NLQSHTATRTLMLAT*ASGNRPEGHRQRGL
Trigger: CAGGCCTCTCTGCCTGTGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCAGTGTGAGATTGCAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS-3UTR CAA 90 bp GGCCCCACTGGCCCTGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GPTGPVTLTRHALGAACCLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...ACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACAGGGCCAGTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp AGCAAGCTACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SKLLRCSLGSFPQHRRASSTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...GGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTAGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGTCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: HSPSTGGPPCTLIPQAPLSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...CAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACAGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACAGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: YFAVLWAHSPSTGGPPCTGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...TGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: YLATPTGGHREQATSLFSSHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACCCGACATGGCCCGGTaGGGCCCGTGCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: GTSSSYEALRHMLYCEPAPDMAR*GPCFAG
Trigger: GCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGG...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACCCCGACATGGCCCGGTaGGGCCCGTGCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SSYEALRHMLYCEPALPDPDMAR*GPCFAG
Trigger: GCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGG...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCATCCACTCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: LAVTLSALKECKLAGVIHSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...GTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000482447.1
CDS-3UTR CAA 90 bp AGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATATGAAGCACTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: SAHIHTDPGPGTSSSYEALPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...TGCTTCATATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: YLATPTGGHREQATSLFSTKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATCCCGACATGGCCCGGTaGGGCCCGTGCTTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNPDMAR*GPCFAG
Trigger: GCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGG...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CTAAGGCCCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCATCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: LRPSNEGRGVQSHTWLHPSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...TGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGGGCCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACATCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: YLATPTGGHREQATSLFSGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTGGGCTCATAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: YTHRWTQGASYFAVLWAHKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...ATGAGCCCAGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCCAGCACAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: PSTGGPPCTLIPQAPLALLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...CAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTGTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAAAGCTGCCGTGTGGGGTaGCACGCGGTGCCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQSCRVG*HAVPRA
Trigger: CGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCT...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTAGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLAHCRP*RTTPQM
Trigger: CATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGC...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357043.6
ENST00000395117.6
ENST00000482447.1
ENST00000616212.4
CDS GCA 90 bp GGAGCAGGAGCATTCGAACGCGGAAATCGAGGTGCTAGTCCAAACTaGTCGGTCGGCTTTAGTCATAGCTGGATAATGCCCGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GAGAFERGNRGASPN*SVGFSHSWIMPGSG
Trigger: ACCTGAGCCGGGCATTATCCAGCTATGACTAAAGCCGACCGAGCAGTTTGGACTAGCACCTCGATTTCCGCGTTCGAATGCTCCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS-3UTR CAA 90 bp CCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTCATTGGGCATTGTACTCCTaGATCTTCTGCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: PGPVPTFTQTLAQGHPPHWALYS*IFCSIS
Trigger: TGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCA...ATGAGGAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp ATGAACCTGGGCCAGTGCCCACATTCACACAGACCCTGGCCCAGGGACATCCTCCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: MNLGQCPHSHRPWPRDILLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...GAGGATGTCCCTGGGCCAGGGTCTGTGTGAATGTGGGCACTGGCCCAGGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAATCAAAGAGTGCAAACTaGCGGGGGTCATCCACCACC +
Preference number: 5 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQSKSAN*RGSSTT
Trigger: GGTGGTGGATGACCCCCGCAAGTTTGCACTCTTTGA...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAACAAAGCTCAGGGCCTaGTCACTGGGCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTSSSYEALRHMLYCEPATKLRA*SLGPAR
Trigger: CCTGGCAGGGCCCAGTGACAAGGCCCTGAGCTTTGT...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCAAAACCTTTCCTCATAGATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: PKPFLIDEGRHPCKHDPVGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...AACAGGGTCATGTTTGCAGGGGTGACGGCCCTCATCTATGAGGAAAGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 5 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACCGAGTCCGAGTCCTCTaGGCTGCAGTAGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: SSYEALRHMLYCEPALPDRVRVL*AAVATA
Trigger: AGCAGTGGCTACTGCAGCCAAGAGGACTCGGACTCG...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS-3UTR CAA 90 bp TTGGCCGTGACGCTCAGCGCGCTCAAAGAGTGCAAACTTGCGGGGGTCATCCACTGGGCATTGTACTCCTaGATCTTCTGCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: LAVTLSALKECKLAGVIHWALYS*IFCSIS
Trigger: TGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCA...GTGGATGACCCCCGCAAGTTTGCACTCTTTGAGCGCGCTGAGCGTCACGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CAA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCCTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: WHCREKPRLFLNACLILSLPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TGTCACACTCACACGGCACGCACTTGGCGCTGCCTGCTGTCTGCCTTCCACCTGCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: CHTHTARTWRCLLSAFHLLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...CAGGTGGAAGGCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGAGTGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CAGGAGGGCCTCCATGCACACTCATTCCACAGGCCCCACTGGCCCTGTCACACTCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: QEGLHAHSFHRPHWPCHTLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...AGTGTGACAGGGCCAGTGGGGCCTGTGGAATGAGTGTGCATGGAGGCCCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CCAGTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 5 (lower is better)
Translates to: PVMRAEGCRAIPGYTHRWMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...CCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp GTAATGAGGGCAGAGGGGTGCAGAGCCATACCTGGCTACACCCACAGGTGGACATGGGCATTGTACTCCTaGATCTTCTGCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: VMRAEGCRAIPGYTHRWTWALYS*IFCSIS
Trigger: TGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCA...TGTCCACCTGTGGGTGTAGCCAGGTATGGCTCTGCACCCCTCTGCCCTCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp GGGACATCCTCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCAAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GTSSSYEALRHMLYCEPASTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...TGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGAGGATGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSYEALRHMLYCEPALPDSTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAACTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: QLNLDEACVRTVLVQAHELPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CAA 90 bp CGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACTCATCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: RCSLGSFPQHRRASMHTHLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...ATGAGTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp ACTTCGCTGTTCTCTGGGCTCATTCCCCCAGCACAGGAGGGCCTCCATGCACACCTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: TSLFSGLIPPAQEGLHAHLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...GTGTGCATGGAGGCCCTCCTGTGCTGGGGGAATGAGCCCAGAGAACAGCGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS CCA 90 bp AATCGAGGTGCTAGTCCAAACTGCTCGGTCGGCTTTAGTCATAGCTaGATAATGCCCGGCTCAGGTCTACCACAAGCCATACAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: NRGASPNCSVGFSHS*IMPGSGLPQAIQLL
Trigger: AAGCAGCTGTATGGCTTGTGGTAGACCTGAGCCGGGCATTATCCAGCTATGACTAAAGCCGACCGAGCAGTTTGGACTAGCACCTCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS-3UTR CAA 90 bp TGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: WHCREKPRLFLNACLILSKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...GCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCAGGGTGTGTGAGGAGTTGGCACTGTAGAGAGAAACCAAGACTCTTCCTCAATAAGGAGGGTGGCTTCTaGCTGGAGGGCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: SGCVRSWHCREKPRLFLNKEGGF*LEGTET
Trigger: TGTCTCTGTGCCCTCCAGCAAGAAGCCACCCTCCTT...ATTGAGGAAGAGTCTTGGTTTCTCTCTACAGTGCCAACTCCTCACACACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp CAGCTGAACCTTGATGAAGCCTGTGTAAGAACCGTCCTTGTTCAAGCTCATGAAGGCGTGCAGGGCCTCTaGGATCTTCTGGCGGCAATA +
Preference number: 5 (lower is better)
Translates to: QLNLDEACVRTVLVQAHEGVQGL*DLLAAI
Trigger: TATTGCCGCCAGAAGATCCAAGAGGCCCTGCACGCC...TTCATGAGCTTGAACAAGGACGGTTCTTACACAGGCTTCATCAAGGTTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395117.6
CDS-3UTR CAA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTTCACACGGCACGCACTaGGCGCTGCCTGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: IFTSETKIEETSVCTTPASHGTH*ALPAVC
Trigger: GCAGACAGCAGGCAGCGCCAAGTGCGTGCCGTGTGA...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp AAACATGACCCTGTTCTGTTTGCAGGGTCTCCAAGATTTTCACTTCTGAGACAACTTCCGCAAGTACACTaGGCCGTGACGCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: KHDPVLFAGSPRFSLLRQLPQVH*AVTLSA
Trigger: CGCGCTGAGCGTCACGGCCAAGTGTACTTGCGGAAG...TTGTCTCAGAAGTGAAAATCTTGGAGACCCTGCAAACAGAACAGGGTCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TACCTGGCTACACCCACAGGTGGACACAGGGAGCAAGCTACTTCGCTGTTCTCTATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 5 (lower is better)
Translates to: YLATPTGGHREQATSLFSMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...AGAGAACAGCGAAGTAGCTTGCTCCCTGTGTCCACCTGTGGGTGTAGCCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTGCAGGCCTGCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SETKIEETSVCTTPAAGLLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...CAGGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp ATGAGGGCCGTCACCCCTGCAAACATGACCCTGTTCTGTTTGCAGGGTCTCCAACTTCTGAGACAAAAATaGAGGAGACTTCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: MRAVTPANMTLFCLQGLQLLRQK*RRLLSA
Trigger: TGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAG...TTGGAGACCCTGCAAACAGAACAGGGTCATGTTTGCAGGGGTGACGGCCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACCTGTTGATCTGGGCATaGTACTCCTTGATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSYEALRHMLYCEPALPDLLIWA*YSLIFC
Trigger: GCAGAAGATCAAGGAGTACAATGCCCAGATCAACAG...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS-3UTR CAA 90 bp ATTTTCACTTCTGAGACAAAAATTGAGGAGACTTCTGTCTGCACCACTCCTGCTAGCACATGCAGGTGCTaGACAGCATCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: IFTSETKIEETSVCTTPASTCRC*TASLGR
Trigger: CCTGCCCAAGGATGCTGTCAAGCACCTGCATGTGCT...AGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCAGAAGTGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS-3UTR CAA 90 bp TCCTCATATGAAGCATTAAGGCACATGCTGTACTGTGAGCCAGCACTCCCTGACATGACCCTGTTCTGTTaGCAGGGTCTCCAAGATTTT +
Preference number: 5 (lower is better)
Translates to: SSYEALRHMLYCEPALPDMTLFC*QGLQDF
Trigger: AAAATCTTGGAGACCCTGCAAACAGAACAGGGTCAT...GTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTCATATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000482447.1
ENST00000616212.4
CDS CCA 90 bp CCGATAATGGGGATACCTAGGAGGTTCCGAGACACCTTACAGTCCTaGGTTAGTAACCTGGATCTCTTTTTCCACCTCTTTAGGCATTTT +
Preference number: 5 (lower is better)
Translates to: PIMGIPRRFRDTLQS*VSNLDLFFHLFRHF
Trigger: AAAATGCCTAAAGAGGTGGAAAAAGAGATCCAGGTTACTAACCCAGGACTGTAAGGTGTCTCGGAACCTCCTAGGTATCCCCATTATCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478619.1
CDS-3UTR CAA 90 bp AGAGAAACCAAGACTCTTCCTCAATGCCTGCCTTATTCTGAGCACCCACCCTTATGGGCATTGTACTCCTaGATCTTCTGCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: RETKTLPQCLPYSEHPPLWALYS*IFCSIS
Trigger: TGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCA...TAAGGGTGGGTGCTCAGAATAAGGCAGGCATTGAGGAAGAGTCTTGGTTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327761.7
ENST00000357043.6
ENST00000395117.6
ENST00000395126.7
ENST00000616212.4
CDS CAA 90 bp TGCCGTGTGGGGTTGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTGCGGCCCTTCCCAGCGCGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: CRVGLHAVPRAMRSA*ARSSRVRPFPARPA
Trigger: CGCTGGGCGCGCTGGGAAGGGCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS GCA 72 bp GCTGCCGTGTGGGGTTGCACGCGGTGCCCCGCGCGATaGGCAGCGCGTTGGCACGCTCCAGCCGGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: AAVWGCTRCPAR*AARWHAPAGCG
Trigger: GCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 72 bp GGTTGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTTaGCACGCTCCAGCCGGGTGCGGCCCTTCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: GCTRCPARCAAR*HAPAGCGPSQR
Trigger: GCGCTGGGAAGGGCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CAA 72 bp GGGTTGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTaGGCACGCTCCAGCCGGGTGCGGCCCTTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: GLHAVPRAMRSA*ARSSRVRPFPA
Trigger: CGCTGGGAAGGGCCGCACCCGGCTGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS GCA 72 bp GGTGGCCACGGCCAGGGACCAGCTGCCGTGTGGGGTTaGACGCGGTGCCCCGCGCGATGCGCAGCGCGTTGG +
Preference number: 6 (lower is better)
Translates to: GGHGQGPAAVWG*TRCPARCAARW
Trigger: CCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 72 bp GGAAGCGGTGGCCACGGCCAGGGACCAGCTGCCGTGTaGGGTTGCACGCGGTGCCCCGCGCGATGCGCAGCG +
Preference number: 6 (lower is better)
Translates to: GSGGHGQGPAAV*GCTRCPARCAA
Trigger: CGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACCGCTTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 72 bp AGGTCGCACCACGTGTGCGTGGCGGGCCCCGCGGGCTaGAAGCGGTGGCCACGGCCAGGGACCAGCTGCCGT +
Preference number: 6 (lower is better)
Translates to: RSHHVCVAGPAG*KRWPRPGTSCR
Trigger: ACGGCAGCTGGTCCCTGGCCGTGGCCACCGCTTCCAGCCCGCGGGGCCCGCCACGCACACGTGGTGCGACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 72 bp CTCCCCCGACATGGCCCGGTTGGGCCCGTGCTTCGCTaGCTTTGGGCGCTAGCAAGCGCGGGCCGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LPRHGPVGPVLR*LWALASAGRAG
Trigger: CCCCGCCCGGCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000482447.1
ENST00000616212.4
CDS CCA 72 bp GGCGGGAAGGTGCGGGAAGTGCGCGTGCGCGGAGCCTaGGTCAGCCTGGGCCCGGGTCCGCTTGCAGCGGGT +
Preference number: 6 (lower is better)
Translates to: GGKVREVRVRGA*VSLGPGPLAAG
Trigger: ACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACTTCCCGCACCTTCCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CAA 72 bp CGGTGGCCACGGCCAGGGACCAGCTGCCGTGTGGGGTaGCACGCGGTGCCCCGCGCGATGCGCAGCGCGTTG +
Preference number: 6 (lower is better)
Translates to: RWPRPGTSCRVG*HAVPRAMRSAL
Trigger: CAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCCGTGGCCACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS GCA 72 bp GTCCGTAGCCGCCAACCACCGCCCCGGTCGCGTGCGTaGGTGTACGCGTGTCAGTGTGCGCGTGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: VRSRQPPPRSRA*VYACQCARAPG
Trigger: CCCGGGCGCACGCGCACACTGACACGCGTACACGCACGCACGCGACCGGGGCGGTGGTTGGCGGCTACGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 72 bp GGCCAGGGACCAGCTGCCGTGTGGGGTTGCACGCGGTaGCCCGCGCGATGCGCAGCGCGTTGGCACGCTCCA +
Preference number: 6 (lower is better)
Translates to: GQGPAAVWGCTR*PARCAARWHAP
Trigger: TGGAGCGTGCCAACGCGCTGCGCATCGCGCGGGGCACCGCGTGCAACCCCACACGGCAGCTGGTCCCTGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS CCA 72 bp CGACATGGCCCGGTTGGGCCCGTGCTTCGCTGGCTTTaGGCGCTAGCAAGCGCGGGCCGGGCGGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: RHGPVGPVLRWL*ALASAGRAGPQ
Trigger: CTGTGGCCCCGCCCGGCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000482447.1
ENST00000616212.4
CDS CAA 72 bp CCGACATGGCCCGGTTGGGCCCGTGCTTCGCTGGCTTaGGGCGCTAGCAAGCGCGGGCCGGGCGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: PTWPGWARASLA*GASKRGPGGAT
Trigger: TGTGGCCCCGCCCGGCCCGCGCTTGCTAGCGCCCAAAGCCAGCGAAGCACGGGCCCAACCGGGCCATGTCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000482447.1
ENST00000616212.4
CDS CAA 90 bp CCTGGGTCAGCCTGGGCCCGGGTCCGCTTGCAGCGGGTGGAGTACTaGCGGAGCCGGCAATCCAGGCTCCCCTCCCAGCCCCCGCGCAGA +
Preference number: 6 (lower is better)
Translates to: PGSAWARVRLQRVEY*RSRQSRLPSQPPRR
Trigger: TCTGCGCGGGGGCTGGGAGGGGAGCCTGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CAA 90 bp AAGTGCGCGTGCGCGGAGCCTGGGTCAGCCTGGGCCCGGGTCCGCTaGCAGCGGGTGGAGTACTTGCGGAGCCGGCAATCCAGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: KCACAEPGSAWARVR*QRVEYLRSRQSRLP
Trigger: GGGGAGCCTGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS GCA 72 bp GCGCGGAGCCTGGGTCAGCCTGGGCCCGGGTCCGCTTaGAGCGGGTGGAGTACTTGCGGAGCCGGCAATCCA +
Preference number: 6 (lower is better)
Translates to: ARSLGQPGPGSA*SGWSTCGAGNP
Trigger: TGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CCA 72 bp TGCGGGAAGTGCGCGTGCGCGGAGCCTGGGTCAGCCTaGGCCCGGGTCCGCTTGCAGCGGGTGGAGTACTTG +
Preference number: 6 (lower is better)
Translates to: CGKCACAEPGSA*ARVRLQRVEYL
Trigger: CAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCACGCGCACTTCCCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CAA 72 bp TGCGCGGAGCCTGGGTCAGCCTGGGCCCGGGTCCGCTaGCAGCGGGTGGAGTACTTGCGGAGCCGGCAATCC +
Preference number: 6 (lower is better)
Translates to: CAEPGSAWARVR*QRVEYLRSRQS
Trigger: GGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAGGCTCCGCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS GCA 72 bp GTCGCGTGCGTGCGTGTACGCGTGTCAGTGTGCGCGTaGGCCCGGGCCAGAGCCGCGCCGCAACCGTTAAGA +
Preference number: 6 (lower is better)
Translates to: VACVRVRVSVCA*ARARAAPQPLR
Trigger: TCTTAACGGTTGCGGCGCGGCTCTGGCCCGGGCGCACGCGCACACTGACACGCGTACACGCACGCACGCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 72 bp GCTCCTTGCGCGCGGCACCCAGGCAGCCCTCGAGAATaGCTGCACTGTGGCCTGCCCATCCTCGCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: APCARHPGSPRE*LHCGLPILALP
Trigger: GGGAAGGGCGAGGATGGGCAGGCCACAGTGCAGGCATTCTCGAGGGCTGCCTGGGTGCCGCGCGCAAGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CCA 72 bp CTGGGTCAGCCTGGGCCCGGGTCCGCTTGCAGCGGGTaGAGTACTTGCGGAGCCGGCAATCCAGGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: LGQPGPGSACSG*STCGAGNPGSP
Trigger: AGGGGAGCCTGGATTGCCGGCTCCGCAAGTACTCCACCCGCTGCAAGCGGACCCGGGCCCAGGCTGACCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS TCA 72 bp GCGCGCACTGCAGGCCTTTGCGCACGACGCCCCAGATaGAGTCGCCACAGAGGTCGCACCACGTGTGCGTGG +
Preference number: 6 (lower is better)
Translates to: ARTAGLCARRPR*SRHRGRTTCAW
Trigger: CCACGCACACGTGGTGCGACCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395117.6
ENST00000478619.1
ENST00000482447.1
ENST00000488024.1
ENST00000616212.4
CDS GCA 72 bp TCACAGACCCCACCTACCACAGGGAACGGGGGCGGGTaGCAGCGTCCGGGCAAGCGCACAAGAGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SQTPPTTGNGGG*QRPGKRTRVAS
Trigger: AGAGGCCACTCTTGTGCGCTTGCCCGGACGCTGGCACCCGCCCCCGTTCCCTGTGGTAGGTGGGGTCTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CAA 72 bp CCCACTCCACAGGCTCGTCGCGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATGAAGTCGCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: PTPQARRAHCRP*RTTPQMKSPQR
Trigger: CCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCGACGAGCCTGTGGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000616212.4
CDS TCA 72 bp CCAGGCAGACGAGCGCGCGGCAGCGGTAGTGGCAGGTaGACTTGCAATCTGCAGAGAGGCGCGCGCACTGCA +
Preference number: 6 (lower is better)
Translates to: PGRRARGSGSGR*TCNLQRGARTA
Trigger: TGCAGTGCGCGCGCCTCTCTGCAGATTGCAAGTTCACCTGCCACTACCGCTGCCGCGCGCTCGTCTGCCTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS TCA 72 bp CCAGGCAGACGAGCGCGCGGCAGCGGTAGTGGCAGGTaGACTTGCAATGCGCGCACTGCAGGCCTTTGCGCA +
Preference number: 6 (lower is better)
Translates to: PGRRARGSGSGR*TCNARTAGLCA
Trigger: TGCGCAAAGGCCTGCAGTGCGCGCATTGCAAGTTCACCTGCCACTACCGCTGCCGCGCGCTCGTCTGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359365.9
ENST00000478619.1
ENST00000488024.1
CDS GCA 72 bp GGCCTGCGAGCTAGCGAGGTTCGCGCGGTGAAGTACTaGTCGAGCTCCGAGTCCGAGTCCTCTTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GLRASEVRAVKY*SSSESESSWLQ
Trigger: CTGCAGCCAAGAGGACTCGGACTCGGAGCTCGAGCAGTACTTCACCGCGCGAACCTCGCTAGCTCGCAGGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS CCA 72 bp TGCTACGCGGACTCTAATGTTGGCCACCTGGGCGTCTaGAAACCGGCCGGAAGGCCACAGGCAGAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: CYADSNVGHLGV*KPAGRPQAERP
Trigger: AGGCCTCTCTGCCTGTGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS CAA 72 bp TTGCAATCTGCAGAGAGGCGCGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATGAAGTCGCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: LQSAERRAHCRP*RTTPQMKSPQR
Trigger: CCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCGCCTCTCTGCAGATTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357043.6
CDS CAA 72 bp TCTGTGCCGCCGGGAAATCGGCAATTAGAACGCTCCTaGCGCGCGGCACCCAGGCAGCCCTCGAGAATGCCT +
Preference number: 6 (lower is better)
Translates to: SVPPGNRQLERS*RAAPRQPSRMP
Trigger: AGGCATTCTCGAGGGCTGCCTGGGTGCCGCGCGCAAGGAGCGTTCTAATTGCCGATTTCCCGGCGGCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CAA 90 bp ATTAGCCTCTCTGTGCCGCCGGGAAATCGGCAATTAGAACGCTCCTaGCGCGCGGCACCCAGGCAGCCCTCGAGAATGCCTGCACTGTGG +
Preference number: 6 (lower is better)
Translates to: ISLSVPPGNRQLERS*RAAPRQPSRMPALW
Trigger: CCACAGTGCAGGCATTCTCGAGGGCTGCCTGGGTGCCGCGCGCAAGGAGCGTTCTAATTGCCGATTTCCCGGCGGCACAGAGAGGCTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478619.1
ENST00000494145.1
CDS CCA 72 bp TCTCACACTGCTACGCGGACTCTAATGTTGGCCACCTaGGCGTCTGGAAACCGGCCGGAAGGCCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: SHTATRTLMLAT*ASGNRPEGHRQ
Trigger: CTGCCTGTGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCAGTGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS CAA 72 bp TGGCAGGTGAACTTGCAATGCGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATGAAGTCGCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: WQVNLQCAHCRP*RTTPQMKSPQR
Trigger: CCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCATTGCAAGTTCACCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359365.9
ENST00000478619.1
ENST00000488024.1
CDS GCA 72 bp CCGAGTCCTCTTGGCTGCAGTAGCCACTGCTCGTCGTaGTGCTCCAGGTCATTTCGAAAGAAGGCGCCTCCG +
Preference number: 6 (lower is better)
Translates to: PSPLGCSSHCSS*CSRSFRKKAPP
Trigger: CGGAGGCGCCTTCTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 72 bp AGTACTGCTCGAGCTCCGAGTCCGAGTCCTCTTGGCTaGAGTAGCCACTGCTCGTCGTGCTGCTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: STARAPSPSPLG*SSHCSSCCSRS
Trigger: TGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGGACTCGGAGCTCGAGCAGTACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS CAA 72 bp TGTAAGAACCGTCCTTGTTGCGCGCACTGCAGGCCTTaGCGCACGACGCCCCAGATGAAGTCGCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: CKNRPCCAHCRP*RTTPQMKSPQR
Trigger: CCTCTGTGGCGACTTCATCTGGGGCGTCGTGCGCAAAGGCCTGCAGTGCGCGCAACAAGGACGGTTCTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482447.1
CDS CAA 90 bp TGGCAGGTGAACTTGCAATCTCACACTGCTACGCGGACTCTAATGTaGGCCACCTGGGCGTCTGGAAACCGGCCGGAAGGCCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: WQVNLQSHTATRTLM*ATWASGNRPEGHRQ
Trigger: CTGCCTGTGGCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCAGTGTGAGATTGCAAGTTCACCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS GCA 72 bp AGTCCTCTTGGCTGCAGTAGCCACTGCTCGTCGTGCTaGTCCAGGTCATTTCGAAAGAAGGCGCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: SPLGCSSHCSSC*SRSFRKKAPPP
Trigger: AGGCGGAGGCGCCTTCTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 72 bp GCTCCGAGTCCGAGTCCTCTTGGCTGCAGTAGCCACTaGTCGTCGTGCTGCTCCAGGTCATTTCGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: APSPSPLGCSSH*SSCCSRSFRKK
Trigger: CTTCTTTCGAAATGACCTGGAGCAGCACGACGAGCAGTGGCTACTGCAGCCAAGAGGACTCGGACTCGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327761.7
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS GCA 72 bp CTGGAAACCGGCCGGAAGGCCACAGGCAGAGAGGCCTaGTCAACAGTTGGATCTCTATCGCCTAGCACAGAA +
Preference number: 6 (lower is better)
Translates to: LETGRKATGREA*STVGSLSPSTE
Trigger: TTCTGTGCTAGGCGATAGAGATCCAACTGTTGAGCAGGCCTCTCTGCCTGTGGCCTTCCGGCCGGTTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494145.1
CDS CAA 72 bp AACTTGCAATCTCACACTGCTACGCGGACTCTAATGTaGGCCACCTGGGCGTCTGGAAACCGGCCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: NLQSHTATRTLM*ATWASGNRPEG
Trigger: GCCTTCCGGCCGGTTTCCAGACGCCCAGGTGGCCAACATTAGAGTCCGCGTAGCAGTGTGAGATTGCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395126.7
ENST00000494145.1
CDS CAA 90 bp GTTGATCTGGGCATTGTACTCCTTGATCTTCTGCTCAATCTCAGCTaGAGAAAGGTCAGGTGTCTCCCACTCCACAGGCTCGTCGCGCGC +
Preference number: 6 (lower is better)
Translates to: VDLGIVLLDLLLNLS*RKVRCLPLHRLVAR
Trigger: GCGCGCGACGAGCCTGTGGAGTGGGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCAGATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395117.6
ENST00000616212.4
CDS GCA 72 bp GCATTCGAACGCGGAAATCGAGGTGCTAGTCCAAACTaGTCGGTCGGCTTTAGTCATAGCTGGATAATGCCC +
Preference number: 6 (lower is better)
Translates to: AFERGNRGASPN*SVGFSHSWIMP
Trigger: GGGCATTATCCAGCTATGACTAAAGCCGACCGAGCAGTTTGGACTAGCACCTCGATTTCCGCGTTCGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS CCA 72 bp GCTAGTCCAAACTGCTCGGTCGGCTTTAGTCATAGCTaGATAATGCCCGGCTCAGGTCTACCACAAGCCATA +
Preference number: 6 (lower is better)
Translates to: ASPNCSVGFSHS*IMPGSGLPQAI
Trigger: TATGGCTTGTGGTAGACCTGAGCCGGGCATTATCCAGCTATGACTAAAGCCGACCGAGCAGTTTGGACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478619.1
ENST00000488024.1
ENST00000494145.1
CDS CAA 90 bp GTTGATCTGGGCATTGTACTCCTTGATCTTCTGCTCAATCTCAGCTaGAGAAAGGTCAGGTGTCTCCCACTCCACAGGCTCGTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: VDLGIVLLDLLLNLS*RKVRCLPLHRLVLV
Trigger: GACCAGGACGAGCCTGTGGAGTGGGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCAGATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327761.7
CDS CAA 90 bp GTTGATCTGGGCATTGTACTCCTTGATCTTCTGCTCAATCTCAGCTaGAGAAAGGTCAGGTGTCTCCCACTCCACAGGCTCGTCCACGTT +
Preference number: 6 (lower is better)
Translates to: VDLGIVLLDLLLNLS*RKVRCLPLHRLVHV
Trigger: AACGTGGACGAGCCTGTGGAGTGGGAGACACCTGACCTTTCTCAAGCTGAGATTGAGCAGAAGATCAAGGAGTACAATGCCCAGATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357043.6
ENST00000359365.9
ENST00000395126.7
CDS CCA 72 bp GGGATACCTAGGAGGTTCCGAGACACCTTACAGTCCTaGGTTAGTAACCTGGATCTCTTTTTCCACCTCTTT +
Preference number: 6 (lower is better)
Translates to: GIPRRFRDTLQS*VSNLDLFFHLF
Trigger: AAAGAGGTGGAAAAAGAGATCCAGGTTACTAACCCAGGACTGTAAGGTGTCTCGGAACCTCCTAGGTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478619.1