RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGRF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000113319

Ensembl transcript IDs: ENST00000265080.9, ENST00000502677.1, ENST00000503795.1, ENST00000512186.1, ENST00000514946.1, ENST00000638442.1

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGAGGCTCAGGGATGTGTAAACACCAGCCTAAGGTTTTCCAGTTaGAGACTGGGCCTAGGACTCAGGGCCGGGATGCCTAGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: TEAQGCVNTSLRFSS*RLGLGLRAGMPRPA
Trigger: AGCTGGCCTAGGCATCCCGGCCCTGAGTCCTAGGCCCAGTCTCCAACTGGAAAACCTTAGGCTGGTGTTTACACATCCCTGAGCCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp GCAGGTCATCAACAGACACTCCCTCAGAGGTGGAGCTCTCTCTCTTaGCCTCTTGCAGCTCCAGGAAGGCTGCAGACTCCAGAAAGTGGT +
Preference number: 1 (lower is better)
Translates to: AGHQQTLPQRWSSLS*PLAAPGRLQTPESG
Trigger: ACCACTTTCTGGAGTCTGCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGTCTGTTGATGACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp TGGCACACGAATAGTGCAGGTCATCAACAGACACTCCCTCAGAGGTaGAGCTCTCTCTCTTGCCCTCTTGCAGCTCCAGGAAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: WHTNSAGHQQTLPQR*SSLSCPLAAPGRLQ
Trigger: CTGCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGTCTGTTGATGACCTGCACTATTCGTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp TCAACAGACACTCCCTCAGAGGTGGAGCTCTCTCTCTTGCCCTCTTaGAGCTCCAGGAAGGCTGCAGACTCCAGAAAGTGGTGTAATTCT +
Preference number: 1 (lower is better)
Translates to: STDTPSEVELSLLPS*SSRKAADSRKWCNS
Trigger: AGAATTACACCACTTTCTGGAGTCTGCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGTCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp CAGTCTGGTTCCATCTTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTaGTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: QSGSIFFGGERSLAS*CTVIGKAYTILSVL
Trigger: CAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp GGAAGGCTGCAGACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATaGGAAAGGCTAGTGAGTGGCACACCCCTGCAGTCCCAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: GRLQTPESGVILKQK*ERLVSGTPLQSQLL
Trigger: AAGCAGCTGGGACTGCAGGGGTGTGCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGTCTGCAGCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp GGGTTTCTCTCTGGAGACAGAATTCCAGTCTGGTTCCATCTTCTTTaGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAA +
Preference number: 1 (lower is better)
Translates to: GFLSGDRIPVWFHLL*WRKEPGFVLYRDRQ
Trigger: TTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp TTGACCCAAACAGCTGGGTTTCTCTCTGGAGACAGAATTCCAGTCTaGTTCCATCTTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTG +
Preference number: 1 (lower is better)
Translates to: LTQTAGFLSGDRIPV*FHLLWWRKEPGFVL
Trigger: CAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp AAGGTCACTTCCCCAGCCTCAGGTAGCAGGACTAACCCTTGCATTTaGTTTTGTAATGTAAGAGCTGTTCGGTGGTTGGGCCCATTTCCC +
Preference number: 1 (lower is better)
Translates to: KVTSPASGSRTNPCI*FCNVRAVRWLGPFP
Trigger: GGGAAATGGGCCCAACCACCGAACAGCTCTTACATTACAAAACCAAATGCAAGGGTTAGTCCTGCTACCTGAGGCTGGGGAAGTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp CAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTaGCAACTCCAAGGCAGAGTAGAATGCATGCACCTTTCCACGTGT +
Preference number: 1 (lower is better)
Translates to: QKKCTQNHPFPSEGL*QLQGRVECMHLSTC
Trigger: ACACGTGGAAAGGTGCATGCATTCTACTCTGCCTTGGAGTTGCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp CTCTTGCCCTCTTGCAGCTCCAGGAAGGCTGCAGACTCCAGAAAGTaGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCAC +
Preference number: 1 (lower is better)
Translates to: LLPSCSSRKAADSRK*CNSQTKMRKASEWH
Trigger: GTGCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGTCTGCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp ATGGGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATaGTTTGTGTGTAGGCAGAAGAGGATGGGTACTTTAACGACCAGA +
Preference number: 1 (lower is better)
Translates to: MGLHNGLEADAAGNA*FVCRQKRMGTLTTR
Trigger: TCTGGTCGTTAAAGTACCCATCCTCTTCTGCCTACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp ACCTTCCCACCCAAGTCTGAAGCATCTGTCTTTGACCCAAACAGCTaGGTTTCTCTCTGGAGACAGAATTCCAGTCTGGTTCCATCTTCT +
Preference number: 1 (lower is better)
Translates to: TFPPKSEASVFDPNS*VSLWRQNSSLVPSS
Trigger: AGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAGACTTGGGTGGGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp CATGCACCTTTCCACGTGTTGTTTGGCCCGAAACTAGTATGTGTGTaGTCCTCTCACAGATTTGTCCCGGTTTTAGTTCACCCTTCAGGA +
Preference number: 1 (lower is better)
Translates to: HAPFHVLFGPKLVCV*SSHRFVPVLVHPSG
Trigger: TCCTGAAGGGTGAACTAAAACCGGGACAAATCTGTGAGAGGACCACACACATACTAGTTTCGGGCCAAACAACACGTGGAAAGGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp CAAAGCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTaGCAAGTGTCCATCAGAGACATTTCATCTGGCAACGGGAGTTAC +
Preference number: 1 (lower is better)
Translates to: QSTLRKHDSFCITKA*QVSIRDISSGNGSY
Trigger: GTAACTCCCGTTGCCAGATGAAATGTCTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR GCA 90 bp TGGAACATTTGGGTCAAAGAAATGAGTCCGAACTTCCAGAAAAAGTaGACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCAACTC +
Preference number: 1 (lower is better)
Translates to: WNIWVKEMSPNFQKK*TQNHPFPSEGLWQL
Trigger: GAGTTGCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCTTTGACCCAAATGTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp GACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATaGCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: DKAFLSKVWCSFFNK*QVCQVHPKIRNCRR
Trigger: CCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR CCA 90 bp AAGTCTGAAGCATCTGTCTTTGACCCAAACAGCTGGGTTTCTCTCTaGAGACAGAATTCCAGTCTGGTTCCATCTTCTTTGGTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: KSEASVFDPNSWVSL*RQNSSLVPSSLVEK
Trigger: TTTCTCCACCAAAGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 90 bp AATAAGAATGGCTGCAGTGTCTCTGGAACATTTGGGTCAAAGAAATaGGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTC +
Preference number: 1 (lower is better)
Translates to: NKNGCSVSGTFGSKK*VRTSRKSAHRTIPF
Trigger: GAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCTTTGACCCAAATGTTCCAGAGACACTGCAGCCATTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp AAAAGCATCATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTaGTGCCCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACA +
Preference number: 1 (lower is better)
Translates to: KSIILDKVRQREFLK*CPSEFTVTRRERYT
Trigger: TGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTATGATGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR TCA 90 bp TACATTGAAATCCTCTACAAAAGAGATCTGAGGACAGTAATCAGATaGCCTCATGTGCGGACAGCACTTTGCAGTTTACAGTCTAATCCA +
Preference number: 1 (lower is better)
Translates to: YIEILYKRDLRTVIR*PHVRTALCSLQSNP
Trigger: TGGATTAGACTGTAAACTGCAAAGTGCTGTCCGCACATGAGGTCATCTGATTACTGTCCTCAGATCTCTTTTGTAGAGGATTTCAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 90 bp GTGCAACTGATACATATTATTTCAAACCCTCAGTTTCTGGAGCACTaGGAAATAAATCACAAGTTATGCGTTGTTAGGATCCAAACAGCC +
Preference number: 1 (lower is better)
Translates to: VQLIHIISNPQFLEH*EINHKLCVVRIQTA
Trigger: GGCTGTTTGGATCCTAACAACGCATAACTTGTGATTTATTTCTCAGTGCTCCAGAAACTGAGGGTTTGAAATAATATGTATCAGTTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp GTTGATATTTCACTATATAGTTACATACAGAGATGGCACTTACCGTaGAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGC +
Preference number: 1 (lower is better)
Translates to: VDISLYSYIQRWHLP*RKCTFSTSMVHYQC
Trigger: GCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAATATCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp GAGCAGATCAGACTAGTGCTATCAATCCTAATGTTAATGTCATGCTaGATGGCAGCTGAGATGAATAATTTTCTGAATCGTTCATGTGTT +
Preference number: 1 (lower is better)
Translates to: EQIRLVLSILMLMSC*MAAEMNNFLNRSCV
Trigger: AACACATGAACGATTCAGAAAATTATTCATCTCAGCTGCCATGCAGCATGACATTAACATTAGGATTGATAGCACTAGTCTGATCTGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp CTTGAGCAGATCAGACTAGTGCTATCAATCCTAATGTTAATGTCATaGTGCATGGCAGCTGAGATGAATAATTTTCTGAATCGTTCATGT +
Preference number: 1 (lower is better)
Translates to: LEQIRLVLSILMLMS*CMAAEMNNFLNRSC
Trigger: ACATGAACGATTCAGAAAATTATTCATCTCAGCTGCCATGCAGCATGACATTAACATTAGGATTGATAGCACTAGTCTGATCTGCTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 90 bp GTTTCAGAAGGTACCATTCCTCACATAGAAATATTTAGAATGCACTaGCAACCATGCACATGCTGTAGACTGAAATTGCTTATGTTTTGG +
Preference number: 1 (lower is better)
Translates to: VSEGTIPHIEIFRMH*QPCTCCRLKLLMFW
Trigger: CCAAAACATAAGCAATTTCAGTCTACAGCATGTGCATGGTTGTCAGTGCATTCTAAATATTTCTATGTGAGGAATGGTACCTTCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 90 bp AGTTCTAACAGAACATGGACAGAGTTTAAAATTTACCGATTTACCTaGTTTGTTAAAATGGCAACTAGCATCTCCCATCTGACATTCCCT +
Preference number: 1 (lower is better)
Translates to: SSNRTWTEFKIYRFT*FVKMATSISHLTFP
Trigger: AGGGAATGTCAGATGGGAGATGCTAGTTGCCATTTTAACAAAGCAGGTAAATCGGTAAATTTTAAACTCTGTCCATGTTCTGTTAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 90 bp CCATTTGTGTTTCATTCTTTCTTTCCTATCCCATTGCCTAAAGACTaGAAAGGCAGTTTCAGAAGGTACCATTCCTCACATAGAAATATT +
Preference number: 1 (lower is better)
Translates to: PFVFHSFFPIPLPKD*KGSFRRYHSSHRNI
Trigger: AATATTTCTATGTGAGGAATGGTACCTTCTGAAACTGCCTTTCCAGTCTTTAGGCAATGGGATAGGAAAGAAAGAATGAAACACAAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 90 bp TGCAGGTCATCAACAGACACTCCCTCAGAGGTGGAGCTCTCTCTCTaGCCCTCTTGCAGCTCCAGGAAGGCTGCAGACTCCAGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: CRSSTDTPSEVELSL*PSCSSRKAADSRKW
Trigger: CCACTTTCTGGAGTCTGCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGTCTGTTGATGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 90 bp ACCCATGATTCCCCACAGCACTTGGTGGCCTTCTGTTCCACAGTTTaGTCGGTGAGATGGGCGTGCACCTTTTTGCAGCTGCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: THDSPQHLVAFCSTV*SVRWACTFLQLPLQ
Trigger: TTGGAGAGGCAGCTGCAAAAAGGTGCACGCCCATCTCACCGACAAAACTGTGGAACAGAAGGCCACCAAGTGCTGTGGGGAATCATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGSMNIP*TQGQGQ
Trigger: CTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGA...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATCCCAGCCCCCAGGCTaGGGACAGCACAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKSQPPG*GQHKER
Trigger: CCTTTCCTTGTGCTGTCCCCAGCCTGGGGGCTGGGA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR GCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGCACTGTCAGGCTGTTaGTTCTCCACAGTTTCCGGC +
Preference number: 2 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKALSGC*FSTVSG
Trigger: GCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTTGGTTCCATCTTCTTTaGTGGAGAAAGGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCWFHLL*WRKEPG
Trigger: GCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCA...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCCTCTCCAAAAGGGCTaGCTTCTTAGGACCAACAGT +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCPLQKG*LLRTNS
Trigger: ACTGTTGGTCCTAAGAAGCCAGCCCTTTTGGAGAGG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCGAGCTGTTCGGTGGTTaGGCCCATTTCCCATGCACT +
Preference number: 2 (lower is better)
Translates to: RNESELPEKVHTEPSLSLELFGG*AHFPCT
Trigger: AGTGCATGGGAAATGGGCCCAACCACCGAACAGCTC...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 90 bp CTGGCAACTCCAAGGCAGAGTAGAATGCATGCACCTTTCCACGTGTaGTTTGGCCCGAAACTAGTATGTGTGTGGTCCTCTCACAGATTT +
Preference number: 2 (lower is better)
Translates to: LATPRQSRMHAPFHV*FGPKLVCVWSSHRF
Trigger: AAATCTGTGAGAGGACCACACACATACTAGTTTCGGGCCAAACAACACGTGGAAAGGTGCATGCATTCTACTCTGCCTTGGAGTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCTCGGTGAGATGGGCGTaGACCTTTTTGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: YRAESVHSLPLWCITNASSVRWA*TFLQLP
Trigger: AGGCAGCTGCAAAAAGGTGCACGCCCATCTCACCGA...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp AACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTTCCTTCTTCAATAAATaGCAGGTCTGTCAAGTACAT +
Preference number: 2 (lower is better)
Translates to: NIPWTQGQGQIFKQGVEVSFFNK*QVCQVH
Trigger: ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGA...AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR-3UTR CCA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCACAGAGACATTTCATCTaGCAACGGGAGTTACCAGTT +
Preference number: 2 (lower is better)
Translates to: AHFANTTASALPKRGKCPQRHFI*QRELPV
Trigger: AACTGGTAACTCCCGTTGCCAGATGAAATGTCTCTG...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR CAA 90 bp AATAGCCATCTTTCACCTTCCCACCCAAGTCTGAAGCATCTGTCTTaGACCCAAACAGCTGGGTTTCTCTCTGGAGACAGAATTCCAGTC +
Preference number: 2 (lower is better)
Translates to: NSHLSPSHPSLKHLS*TQTAGFLSGDRIPV
Trigger: GACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAGACTTGGGTGGGAAGGTGAAAGATGGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCTCTCTGATGATGTGTaGTATCATTCTCATTTTGGA +
Preference number: 2 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSLSDDV*YHSHFG
Trigger: TCCAAAATGAGAATGATATCACACATCATCAGAGAG...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCAGGAGCCTGGCTTCGTaGTGTACCGTGATAGGCAAG +
Preference number: 2 (lower is better)
Translates to: TPESGVILKQKCERLVSGRSLAS*CTVIGK
Trigger: CTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCT...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCATTCCCCACAGCACTTaGTGGCCTTCTGTTCCACAG +
Preference number: 2 (lower is better)
Translates to: YRAESVHSLPLWCITNASIPHST*WPSVPQ
Trigger: CTGTGGAACAGAAGGCCACCAAGTGCTGTGGGGAAT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTATAAGGAACCCTCCTTaGGTTGAGTGCTACACTGTT +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCIRNPP*VECYTV
Trigger: AACAGTGTAGCACTCAACCCAAGGAGGGTTCCTTAT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACTGTCCTGCTTTCCATaGACATCCCGTGGACTCAGG +
Preference number: 2 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGLSCFP*TSRGLR
Trigger: CCTGAGTCCACGGGATGTTCATGGAAAGCAGGACAG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTGAGGGAGGTAAACAATaGGATAGCCCTATTTCTTCA +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCEGGKQ*DSPISS
Trigger: TGAAGAAATAGGGCTATCTCATTGTTTACCTCCCTC...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAGCACCTTTTTGCAGCTaGCTCTCCAAAAGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGAPFCS*LSKRAG
Trigger: GCCAGCCCTTTTGGAGAGGCAGCTGCAAAAAGGTGC...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKSMNIP*TQGQGQ
Trigger: CTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGA...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGTAAGAGCTGTTCGGTaGTTGGGCCCATTTCCCATG +
Preference number: 2 (lower is better)
Translates to: TPESGVILKQKCERLVSGVRAVR*LGPFPM
Trigger: CATGGGAAATGGGCCCAACCACCGAACAGCTCTTAC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTACTGTGCGACCTTTaGCTGATGATCTATTCTGTA +
Preference number: 2 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLVLCDL*LMIYSV
Trigger: TACAGAATAGATCATCAGCCAAAGGTCGCACAGTAC...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR CAA 90 bp GGCCACAGCACAAACCCCTCTGTCCAATCACAAATGTCCACAAATTaGCAAAGTAACTGGACACGAACGATATGCTTCTCAAACTCACAC +
Preference number: 2 (lower is better)
Translates to: GHSTNPSVQSQMSTN*QSNWTRTICFSNSH
Trigger: GTGTGAGTTTGAGAAGCATATCGTTCGTGTCCAGTTACTTTGCAAATTTGTGGACATTTGTGATTGGACAGAGGGGTTTGTGCTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGCACATGCTGTAGACTaGAATTGCTTATGTTTTGGT +
Preference number: 2 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGAHAVD*NCLCFG
Trigger: ACCAAAACATAAGCAATTTCAGTCTACAGCATGTGC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGCCTGGGCAACATGGTaGGACCCTGTTTTTCAAACA +
Preference number: 2 (lower is better)
Translates to: TPESGVILKQKCERLVSGAWATW*DPVFQT
Trigger: TGTTTGAAAAACAGGGTCTCACCATGTTGCCCAGGC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCGGCAGGAAGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASGRKIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCTTCCTGCC...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCCTTTACTTTTCTTCTaGAAGACCTTGAGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCPLLFF*KTLRCL
Trigger: CAAACACCTCAAGGTCTTGCAGAAGAAAAGTAAAGG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCAGTTTCTGGAGCACTaGGAAATAAATCACAAGTTA +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCQFLEH*EINHKL
Trigger: TAACTTGTGATTTATTTCTCAGTGCTCCAGAAACTG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAGCAGGACTAACCCTTaGATTTGGTTTTGTAATGTA +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCSRTNP*IWFCNV
Trigger: TACATTACAAAACCAAATGCAAGGGTTAGTCCTGCT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTGCACCAGGAGTAAAGTaGCTTGGAAACAAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFAPGVK*LGNKWK
Trigger: CTTCCACTTGTTTCCAAGGCACTTTACTCCTGGTGC...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTGCAGACTCCAGAAAGTaGTGTAATTCTCAAACAAAA +
Preference number: 2 (lower is better)
Translates to: GLHNGLEADAAGNACFVCADSRK*CNSQTK
Trigger: TTTTGTTTGAGAATTACACCACTTTCTGGAGTCTGC...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCATGAGAATAGATTCCTaGAGTACTATGAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: RNESELPEKVHTEPSLSLMRIDS*STMSGE
Trigger: TTCCCCACTCATAGTACTGCAGGAATCTATTCTCAT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGCCCAAGATAAGGAACTaGAGGAGGGTTACAACTCTT +
Preference number: 2 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLPKIRN*RRVTTL
Trigger: AAGAGTTGTAACCCTCCTGCAGTTCCTTATCTTGGG...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTTTGACCCAAACAGCTaGGTTTCTCTCTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLFDPNS*VSLWRQ
Trigger: CTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAA...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCAGAGGCAGATGCAGCTaGGAATGCATGCTTTGTGTG +
Preference number: 2 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASRGRCS*ECMLCV
Trigger: CACACAAAGCATGCATTCCCAGCTGCATCTGCCTCT...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTCAGGCACAAAAGAAATaGATAAGGACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFQAQKK*IRTFPA
Trigger: GGCTGGGAATGTCCTTATCCATTTCTTTTGTGCCTG...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR TCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCATATTTAGAATGCACTaGCAACCATGCACATGCTGT +
Preference number: 2 (lower is better)
Translates to: YRAESVHSLPLWCITNASIFRMH*QPCTCC
Trigger: ACAGCATGTGCATGGTTGTCAGTGCATTCTAAATAT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCAGATGGCACTTACCGTaGAGAAAGTGTACATTCTCT +
Preference number: 2 (lower is better)
Translates to: TPESGVILKQKCERLVSGRWHLP*RKCTFS
Trigger: AGAGAATGTACACTTTCTGCACGGTAAGTGCCATCT...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 90 bp AAGTGCAAGGAAAGAGGGAAAGCAGCCAGACAGATCCATTTTTCATaGTCAGCATCAATAAGTTTCATGCTGCTAAGAGAAAATGTCAGG +
Preference number: 2 (lower is better)
Translates to: KCKERGKAARQIHFS*SASISFMLLRENVR
Trigger: CCTGACATTTTCTCTTAGCAGCATGAAACTTATTGATGCTGACAATGAAAAATGGATCTGTCTGGCTGCTTTCCCTCTTTCCTTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR TCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCATGGATCCTTGTCCCTaGGTTCTAACAGAACATGGA +
Preference number: 2 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASMDPCP*VLTEHG
Trigger: TCCATGTTCTGTTAGAACTCAGGGACAAGGATCCAT...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGAAATTGCTTATGTTTTaGTCCATCTCTGTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: ALTVQKVYILYLYGALPMKLLMF*SISVEE
Trigger: TTCCTCTACAGAGATGGACCAAAACATAAGCAATTT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCACTAACCCTTGCATTTaGTTTTGTAATGTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: YRAESVHSLPLWCITNASTNPCI*FCNVRA
Trigger: AGCTCTTACATTACAAAACCAAATGCAAGGGTTAGT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCATTCTCTACCTCTATaGTGCATTACCAATGCTAGC +
Preference number: 2 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASHSLPL*CITNAS
Trigger: GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAAACTAGTATGTGTGTaGTCCTCTCACAGATTTGTC +
Preference number: 2 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGKLVCV*SSHRFV
Trigger: GACAAATCTGTGAGAGGACCACACACATACTAGTTT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAACAGTAATGGGACTTaGTATGAGAGCCACTTGAAA +
Preference number: 2 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGNSNGT*YESHLK
Trigger: TTTCAAGTGGCTCTCATACCAAGTCCCATTACTGTT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTCTTTCCTATCCCATTaGCTAAAGACTGGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSSFLSH*LKTGKA
Trigger: TGCCTTTCCAGTCTTTAGGCAATGGGATAGGAAAGA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGTTAATAAGAATGGCTaGAGTGTCTCTGGAACATTT +
Preference number: 2 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSVNKNG*SVSGTF
Trigger: AAATGTTCCAGAGACACTGCAGCCATTCTTATTAAC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp CAGGGATGTGTAAACACCAGCCTAAGGTTTTCCAGTTaGAGACTGGGCCTAGGACTCAGGGCCGGGATGCCT +
Preference number: 3 (lower is better)
Translates to: QGCVNTSLRFSS*RLGLGLRAGMP
Trigger: AGGCATCCCGGCCCTGAGTCCTAGGCCCAGTCTCCAACTGGAAAACCTTAGGCTGGTGTTTACACATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 72 bp AGCACTTGGTGGCCTTCTGTTCCACAGTTTTGTCGGTaGGATGGGCGTGCACCTTTTTGCAGCTGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: STWWPSVPQFCR*DGRAPFCSCLS
Trigger: GGAGAGGCAGCTGCAAAAAGGTGCACGCCCATCTCACCGACAAAACTGTGGAACAGAAGGCCACCAAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp AATAGTGCAGGTCATCAACAGACACTCCCTCAGAGGTaGAGCTCTCTCTCTTGCCCTCTTGCAGCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: NSAGHQQTLPQR*SSLSCPLAAPG
Trigger: TCCTGGAGCTGCAAGAGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGTCTGTTGATGACCTGCACTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 72 bp GCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATaGACATCCCGTGGACTCAGGGGCAAGGCCAGATCT +
Preference number: 3 (lower is better)
Translates to: ARHTQFCLSCFP*TSRGLRGKARS
Trigger: AGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp TGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTaGATTACCAAAGCGTGGCAAGTGTCCATCAGAGAC +
Preference number: 3 (lower is better)
Translates to: CPQSTLRKHDSF*ITKAWQVSIRD
Trigger: GTCTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CAA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTTTCTGTTCCACAGTTTaGTCGGTGAGATGGGCGTGC +
Preference number: 3 (lower is better)
Translates to: GLHNGLEADAAGNACFVCFCSTV*SVRWAC
Trigger: GCACGCCCATCTCACCGACAAAACTGTGGAACAGAA...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp ACAGCTGGGTTTCTCTCTGGAGACAGAATTCCAGTCTaGTTCCATCTTCTTTGGTGGAGAAAGGAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: TAGFLSGDRIPV*FHLLWWRKEPG
Trigger: GCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp TCCCCAGCCTCAGGTAGCAGGACTAACCCTTGCATTTaGTTTTGTAATGTAAGAGCTGTTCGGTGGTTGGGC +
Preference number: 3 (lower is better)
Translates to: SPASGSRTNPCI*FCNVRAVRWLG
Trigger: GCCCAACCACCGAACAGCTCTTACATTACAAAACCAAATGCAAGGGTTAGTCCTGCTACCTGAGGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCAGAGCTGTTCGGTGGTaGGGCCCATTTCCCATGCAC +
Preference number: 3 (lower is better)
Translates to: YRAESVHSLPLWCITNASRAVRW*GPFPMH
Trigger: GTGCATGGGAAATGGGCCCAACCACCGAACAGCTCT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp TCCATCTTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTaGTGTACCGTGATAGGCAAGGCATACACAATTCTG +
Preference number: 3 (lower is better)
Translates to: SIFFGGERSLAS*CTVIGKAYTIL
Trigger: CAGAATTGTGTATGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGTGGGCGTGCACCTTTTaGCAGCTGCCTCTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: ALTVQKVYILYLYGALPMWACTF*QLPLQK
Trigger: CTTTTGGAGAGGCAGCTGCAAAAAGGTGCACGCCCA...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp CAGACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATaGGAAAGGCTAGTGAGTGGCACACCCCTGCAGTCC +
Preference number: 3 (lower is better)
Translates to: QTPESGVILKQK*ERLVSGTPLQS
Trigger: GGACTGCAGGGGTGTGCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp CCCAAGTCTGAAGCATCTGTCTTTGACCCAAACAGCTaGGTTTCTCTCTGGAGACAGAATTCCAGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: PKSEASVFDPNS*VSLWRQNSSLV
Trigger: AACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAGACTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp CTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTaGCAAGTGTCCATCAGAGACATTTCATCTGGCAAC +
Preference number: 3 (lower is better)
Translates to: LRKHDSFCITKA*QVSIRDISSGN
Trigger: GTTGCCAGATGAAATGTCTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CAA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCTCTCTCTTGCCCTCTaGCAGCTCCAGGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASLSLAL*QLQEGC
Trigger: GCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCTGAAGCATCTGTCTTaGACCCAAACAGCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: RNESELPEKVHTEPSLSLLKHLS*TQTAGF
Trigger: AAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAGATTCCCCACAGCACTaGGTGGCCTTCTGTTCCACA +
Preference number: 3 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGDSPQH*VAFCST
Trigger: TGTGGAACAGAAGGCCACCAAGTGCTGTGGGGAATC...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAGGAACCCTCCTTGGGTaGAGTGCTACACTGTTGGCT +
Preference number: 3 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGGTLLG*SATLLA
Trigger: AGCCAACAGTGTAGCACTCAACCCAAGGAGGGTTCC...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp TGGGTCAAAGAAATGAGTCCGAACTTCCAGAAAAAGTaGACACAGAACCATCCCTTTCCCTCTGAAGGACTC +
Preference number: 3 (lower is better)
Translates to: WVKEMSPNFQKK*TQNHPFPSEGL
Trigger: GAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCTTTGACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp CATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATaGTTTGTGTGTAGGCAGAAGAGGATGGGTACTTTA +
Preference number: 3 (lower is better)
Translates to: HNGLEADAAGNA*FVCRQKRMGTL
Trigger: TAAAGTACCCATCCTCTTCTGCCTACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp GCATCTGTCTTTGACCCAAACAGCTGGGTTTCTCTCTaGAGACAGAATTCCAGTCTGGTTCCATCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: ASVFDPNSWVSL*RQNSSLVPSSL
Trigger: CAAAGAAGATGGAACCAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp TTCCACGTGTTGTTTGGCCCGAAACTAGTATGTGTGTaGTCCTCTCACAGATTTGTCCCGGTTTTAGTTCAC +
Preference number: 3 (lower is better)
Translates to: FHVLFGPKLVCV*SSHRFVPVLVH
Trigger: GTGAACTAAAACCGGGACAAATCTGTGAGAGGACCACACACATACTAGTTTCGGGCCAAACAACACGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGCACCTTTCCACGTGTaGTTTGGCCCGAAACTAGTA +
Preference number: 3 (lower is better)
Translates to: TPESGVILKQKCERLVSGAPFHV*FGPKLV
Trigger: TACTAGTTTCGGGCCAAACAACACGTGGAAAGGTGC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CCA 72 bp TCTTGCAGCTCCAGGAAGGCTGCAGACTCCAGAAAGTaGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGT +
Preference number: 3 (lower is better)
Translates to: SCSSRKAADSRK*CNSQTKMRKAS
Trigger: ACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGTCTGCAGCCTTCCTGGAGCTGCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATCAAATCCTAGAAGATaGGTAGGTGTGCCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGSNPRR*VGVPRP
Trigger: TGGCCTGGGCACACCTACCAATCTTCTAGGATTTGA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCTTCTTCTGCAAGACCTaGAGGTGTTTGGTGCAACTG +
Preference number: 3 (lower is better)
Translates to: TPESGVILKQKCERLVSGFFCKT*RCLVQL
Trigger: CAGTTGCACCAAACACCTCAAGGTCTTGCAGAAGAA...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAAATTGTCTCAAATCAATaGCCTGGGGCATTCTCCCCT +
Preference number: 3 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKIVSNQ*PGAFSP
Trigger: AGGGGAGAATGCCCCAGGCAATTGATTTGAGACAAT...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR TCA 72 bp TACAGTCTAATCCATTTGGTCCTCACAATAGCCCTGTaGGATAAGCAGCACAGGGATTACTATTCACACCGT +
Preference number: 3 (lower is better)
Translates to: YSLIHLVLTIAL*DKQHRDYYSHR
Trigger: ACGGTGTGAATAGTAATCCCTGTGCTGCTTATCTCACAGGGCTATTGTGAGGACCAAATGGATTAGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTaGTGCCCTTCAGAGTTTACAGTAACCAGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: ILDKVRQREFLK*CPSEFTVTRRE
Trigger: CTCTCTCCTGGTTACTGTAAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCTGGTTCCATCTTCTTaGGTGGAGAAAGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHLVPSS*VEKGAW
Trigger: CCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCACCGATTTACCTGCTTaGTTAAAATGGCAACTAGCA +
Preference number: 3 (lower is better)
Translates to: RNESELPEKVHTEPSLSLTDLPA*LKWQLA
Trigger: TGCTAGTTGCCATTTTAACAAAGCAGGTAAATCGGT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACAAGGGCCTGATGTaGTCAGCATTATATTCCACC +
Preference number: 3 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKYKGLM*SALYST
Trigger: GGTGGAATATAATGCTGACAACATCAGGCCCTTGTA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR CCA 72 bp ACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATaGTGCATTACCAATGCTAGCTCTTTCACTGAGTCT +
Preference number: 3 (lower is better)
Translates to: TYRAESVHSLPL*CITNASSFTES
Trigger: AGACTCAGTGAAAGAGCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCGAAATTGCTTATGTTTaGGTCCATCTCTGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: YRAESVHSLPLWCITNASEIAYV*VHLCRG
Trigger: TCCTCTACAGAGATGGACCAAAACATAAGCAATTTC...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTAGGCAGGAAGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSRQEDC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCTTCCTGCCT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 72 bp TCTGTGCAGAGGAATAGAGGAGGCATTACAAGGGCCTaGTGTTGTCAGCATTATATTCCACCCTTATTTAAA +
Preference number: 3 (lower is better)
Translates to: SVQRNRGGITRA*CCQHYIPPLFK
Trigger: TTTAAATAAGGGTGGAATATAATGCTGACAACATCAGGCCCTTGTAATGCCTCCTCTATTCCTCTGCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTCTGGGAATGCATGCTTaGTGTGTAGGCAGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSLGMHA*CVGRRG
Trigger: TCCTCTTCTGCCTACACACAAAGCATGCATTCCCAG...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp TCACTATATAGTTACATACAGAGATGGCACTTACCGTaGAGAAAGTGTACATTCTCTACCTCTATGGTGCAT +
Preference number: 3 (lower is better)
Translates to: SLYSYIQRWHLP*RKCTFSTSMVH
Trigger: ATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp TCCACAAATTTGCAAAGTAACTGGACACGAACGATATaGTTCTCAAACTCACACACATATTCGTCCATCACA +
Preference number: 3 (lower is better)
Translates to: STNLQSNWTRTI*FSNSHTYSSIT
Trigger: TGTGATGGACGAATATGTGTGTGAGTTTGAGAAGCATATCGTTCGTGTCCAGTTACTTTGCAAATTTGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTCCAAGATAATTTCGTaGACAGTACAAAATGTGGGC +
Preference number: 3 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASSKIIS*TVQNVG
Trigger: GCCCACATTTTGTACTGTCAACGAAATTATCTTGGA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR TCA 72 bp GGTACCATTCCTCACATAGAAATATTTAGAATGCACTaGCAACCATGCACATGCTGTAGACTGAAATTGCTT +
Preference number: 3 (lower is better)
Translates to: GTIPHIEIFRMH*QPCTCCRLKLL
Trigger: AAGCAATTTCAGTCTACAGCATGTGCATGGTTGTCAGTGCATTCTAAATATTTCTATGTGAGGAATGGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp AGAACATGGACAGAGTTTAAAATTTACCGATTTACCTaGTTTGTTAAAATGGCAACTAGCATCTCCCATCTG +
Preference number: 3 (lower is better)
Translates to: RTWTEFKIYRFT*FVKMATSISHL
Trigger: CAGATGGGAGATGCTAGTTGCCATTTTAACAAAGCAGGTAAATCGGTAAATTTTAAACTCTGTCCATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp AGACTAGTGCTATCAATCCTAATGTTAATGTCATGCTaGATGGCAGCTGAGATGAATAATTTTCTGAATCGT +
Preference number: 3 (lower is better)
Translates to: RLVLSILMLMSC*MAAEMNNFLNR
Trigger: ACGATTCAGAAAATTATTCATCTCAGCTGCCATGCAGCATGACATTAACATTAGGATTGATAGCACTAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTGCTGTAGACTGAAATaGCTTATGTTTTGGTCCATC +
Preference number: 3 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSCCRLK*LMFWSI
Trigger: GATGGACCAAAACATAAGCAATTTCAGTCTACAGCA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR GCA 72 bp ATCAGACTAGTGCTATCAATCCTAATGTTAATGTCATaGTGCATGGCAGCTGAGATGAATAATTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: IRLVLSILMLMS*CMAAEMNNFLN
Trigger: ATTCAGAAAATTATTCATCTCAGCTGCCATGCAGCATGACATTAACATTAGGATTGATAGCACTAGTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAGCGGGACTCTGGGTaGTGGTGGTGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: NIPWTQGQGQIFKQGVEVQRDSG*WWWDCW
Trigger: CCAGCAGTCCCACCACCACCACCCAGAGTCCCGCTG...AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTACGGAGGGCTCACGGGTaGCCGCCGGTCTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLRRAHG*PPVSPL
Trigger: CAGGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCG...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTACCGTTCCCGGGCTTTaGTCTGGAGAAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EHPVDSGARPDLQAGSRGTVPGL*SGEERP
Trigger: AGGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGT...ACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTGGAGCTTTCCACTCCTaGTCGGTCCGCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PVDSGARPDLQAGSRGSIGAFHS*SVRWCR
Trigger: TCTGCACCAGCGGACCGAGCAGGAGTGGAAAGCTCC...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTCTGACCAGTGTGTGGTaGTGGAGACGCAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: PVDSGARPDLQAGSRGSILTSVW*WRRSGT
Trigger: AGTCCCGCTGCGTCTCCACCACCACACACTGGTCAG...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp CATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGGGGATCTGCAAGGTaGAAGTTCTGTGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: HEHPVDSGARPDLQAGSRGGSAR*KFCGVR
Trigger: GCGGACACCACAGAACTTTCACCTTGCAGATCCCCC...TCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAGAATGTCCGGGCCGCTaGGGAGGAGCGTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AHFANTTASALPKRGKCPECPGR*GGASSQ
Trigger: CTGACTGGACGCTCCTCCTCAGCGGCCCGGACATTC...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCGCCGGTCTCACCCCTaGCTCGCGGCCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLRRSHP*LAAMAQ
Trigger: CTGGGCCATGGCCGCGAGGCAGGGGTGAGACCGGCG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAGGAAGCCGCGCTTGGTaGCCTCCTTGCGCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AHFANTTASALPKRGKCPGSRAW*PPCAPE
Trigger: TTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCC...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGCGAACCACTTCTCGTaGCAGCGGCTCGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGANHFS*QRLASA
Trigger: GGCCGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCCTCCAGGAGGTACATaGCCGCCGGGCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGPPGGT*PPGGSS
Trigger: AGAGCTGCCGCCCGGCGGGCATGTACCTCCTGGAGG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTACAGCGCAGCTCCAGTaGCTTCTGACCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: NIPWTQGQGQIFKQGVEVTAQLQ*LLTFMA
Trigger: GGCCATGAAGGTCAGAAGCCACTGGAGCTGCGCTGT...AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTATCTGACCAGTGTGTaGTGGTGGAGACGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PVDSGARPDLQAGSRGSIYLTSV*WWRRSG
Trigger: CCCGCTGCGTCTCCACCACCACACACTGGTCAGATA...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGGAGCTTTCCACTCCTaGTCGGTCCGCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAGAFHS*SVRWCR
Trigger: TCTGCACCAGCGGACCGAGCAGGAGTGGAAAGCTCC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTCTGTGGTGTCCGCTaGAGGGGAGCTTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: PWTQGQGQIFKQGVEVQFFCGVR*RGAFHS
Trigger: GGAGTGGAAAGCTCCCCTGCAGCGGACACCACAGAA...AAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAGGTCCTCCTTGGAGCTaGAGAGAATGTCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AHFANTTASALPKRGKCPGPPWS*RECPGR
Trigger: GCGGCCCGGACATTCTCTGCAGCTCCAAGGAGGACC...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCCTGCCTCGCGGCCATaGCCCAGCTGGCTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLPASRP*PSWLPR
Trigger: TCGAGGGAGCCAGCTGGGCCATGGCCGCGAGGCAGG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAACCAGTGTGTGGTGGTaGAGACGCAGCGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKATSVWW*RRSGTL
Trigger: CAGAGTCCCGCTGCGTCTCCACCACCACACACTGGT...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTGCGGCTTTCCTTTCTTaGGGAAGAAGGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: EHPVDSGARPDLQAGSRGAAFLS*GRRSGS
Trigger: AGACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGC...ACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
3UTR CAA 72 bp TCAGGGATGTGTAAACACCAGCCTAAGGTTTTCCAGTaGGAGACTGGGCCTAGGACTCAGGGCCGGGATGCC +
Preference number: 4 (lower is better)
Translates to: SGMCKHQPKVFQ*ETGPRTQGRDA
Trigger: GGCATCCCGGCCCTGAGTCCTAGGCCCAGTCTCCAACTGGAAAACCTTAGGCTGGTGTTTACACATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTTGTTTAAGGCCGAGGTaGTCTCCAGCACGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSCLRPR*SPARRC
Trigger: ACAACGGCGTGCTGGAGATCACCTCGGCCTTAAACA...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTCTGCATGGTGCGGGTaGGGAGGGCTCACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLSAWCG*GGLTGG
Trigger: GCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGCCTCCAGGAGGTACATaGCCGCCGGGCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKPPGGT*PPGGSS
Trigger: AGAGCTGCCGCCCGGCGGGCATGTACCTCCTGGAGG...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGTCAGCACTTGGCACTaGCACGGCCGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKVSTWH*HGRGPG
Trigger: GCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGAC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR CAA 72 bp TCCCCACAGCACTTGGTGGCCTTCTGTTCCACAGTTTaGTCGGTGAGATGGGCGTGCACCTTTTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPQHLVAFCSTV*SVRWACTFLQL
Trigger: CAGCTGCAAAAAGGTGCACGCCCATCTCACCGACAAAACTGTGGAACAGAAGGCCACCAAGTGCTGTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTAAGAGAGGCCTCTGCTaGGATCCAGTGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSKRGLC*DPVVSD
Trigger: GTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTT...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCATGTTTAAGGCCGAGGTaGTCTCCAGCACGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKACLRPR*SPARRC
Trigger: ACAACGGCGTGCTGGAGATCACCTCGGCCTTAAACA...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGCGTTCGTTCGCAGCTaGAGCCCTCCAGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLAFVRS*SPPGGT
Trigger: TGTACCTCCTGGAGGGCTGCAGCTGCGAACGAACGC...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGCACCTTTTTGCAGCTaGCTCTCCAAAAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAAPFCS*LSKRAG
Trigger: GCCAGCCCTTTTGGAGAGGCAGCTGCAAAAAGGTGC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCATCGGTGAGATGGGCGTaGACCTTTTTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKASVRWA*TFLQLP
Trigger: AGGCAGCTGCAAAAAGGTGCACGCCCATCTCACCGA...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTCGGCCATGGCCCAGCTaGCTCCCTCGAGGGCGCGAC +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPRPWPS*LPRGRD
Trigger: GTCGCGCCCTCGAGGGAGCCAGCTGGGCCATGGCCG...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAAGAGGCGCTCCACGCTaGCATAACGGATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLRGAPR*HNGSGA
Trigger: TGCCCCAGATCCGTTATGCCAGCGTGGAGCGCCTCT...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCTGACCAGTGTGTGGTaGTGGAGACGCAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGLTSVW*WRRSGT
Trigger: AGTCCCGCTGCGTCTCCACCACCACACACTGGTCAG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTGTTGTTAAAGCCTGGTaGACTCCCATGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PWTQGQGQIFKQGVEVQFVVKAW*TPMSCC
Trigger: GCAGCAGGACATGGGAGTCCACCAGGCTTTAACAAC...AAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGCTTGGTGCCCTCCTTaGGCGCCAGAAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKAWCPP*APERPG
Trigger: ACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGGCGAACCACTTCTCGTaGCAGCGGCTCGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLANHFS*QRLASA
Trigger: GGCCGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGC...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAAGCGAACCACTTCTCGTaGCAGCGGCTCGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKANHFS*QRLASA
Trigger: GGCCGAGGCGAGCCGCTGGCACGAGAAGTGGTTCGC...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGCGGGGAAGAGAATTTaGGACACAGACGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAAGKRI*DTDVGI
Trigger: AATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAGCAGATGTCCGCCACTaGCACCCATTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVADVRH*HPFLDG
Trigger: GCCATCGAGAAATGGGTGGCAGTGGCGGACATCTGC...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTCAGGAAGCCGCGCTTaGTGCCCTCCTTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: QAVASPQFPAQISSTLQKSGSRA*CPPCAP
Trigger: TGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCGACGCAGCGGGACTCTaGGTGGTGGTGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASDAAGL*VVVVGL
Trigger: CAGTCCCACCACCACCACCCAGAGTCCCGCTGCGTC...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCGACGCAGCGGGACTCTaGGTGGTGGTGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: DKAFLSKVWCSFFNKCQVDAAGL*VVVVGL
Trigger: CAGTCCCACCACCACCACCCAGAGTCCCGCTGCGTC...GACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGAAGGTGAAAGTTCTGTaGTGTCCGCTGCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LCDLWLMIYSVGSLLELAKVKVL*CPLQGS
Trigger: GCTCCCCTGCAGCGGACACCACAGAACTTTCACCTT...CGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGTTGTTAAAGCCTGGTaGACTCCCATGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAVVKAW*TPMSCC
Trigger: GCAGCAGGACATGGGAGTCCACCAGGCTTTAACAAC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCSMNIP*TQGQGQ
Trigger: CTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGA...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTGCACTGCCACGGCCGTaGGCCAGGCCGACCGGTCCT +
Preference number: 4 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTALPRP*ARPTGP
Trigger: AGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGC...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp ACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGCTGGTGAACGTACTCTaGCTCTGCCTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: TQGQGQIFKQGVEVQFLVLVNVL*LCLHHG
Trigger: ACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAG...CACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCATGGTCCAGGAGGGTaGTCTGTTCTGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMHGPGG*SVLPAP
Trigger: TGGAGCTGGCAGAACAGATCACCCTCCTGGACCATG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCTGTCCTGCTTTCCATaGACATCCCGTGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGLSCFP*TSRGLR
Trigger: CCTGAGTCCACGGGATGTTCATGGAAAGCAGGACAG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCCATCCCTTTCCCTCTaGAGGACTCTGGCAACTCCA +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGPSLSL*RTLATP
Trigger: TGGAGTTGCCAGAGTCCTTCAGAGGGAAAGGGATGG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTTGGTCCCTTGGCGGATaGACGTTTGGCTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTWSLGG*TFGWCP
Trigger: TGGACACCAGCCAAACGTTCATCCGCCAAGGGACCA...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCGCTTCGCCCAAAGTTaGGGGAGCCGAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASRFAQS*GSRAPA
Trigger: CGCGGGGGCTCGGCTCCCGCAACTTTGGGCGAAGCG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCGCTTGGTGCCCTCCTTaGGCGCCAGAAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASAWCPP*APERPG
Trigger: ACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGC...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCGCTTGGTGCCCTCCTTaGGCGCCAGAAAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPSSVKFGVPSSINARSVAWCPP*APERPG
Trigger: ACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGC...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTACACTCTTTACCATCCTaGTCCTCCTCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVHSLPS*SSSQRS
Trigger: GCTGCGCTGTGAGGAGGAGCAGGATGGTAAAGAGTG...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTACAGACGTGGGGATTTaGCATCCACCAAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSTDVGI*HPPNVH
Trigger: GTGAACATTTGGTGGATGGCAAATCCCCACGTCTGT...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTTGGACTCCCATGTCCTaGTGCAGCTGTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: GQGQIFKQGVEVQFLVTAWTPMS*CSCGYC
Trigger: GCAATAGCCACAGCTGCAGCAGGACATGGGAGTCCA...AGCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAGAGGGTGATCTGTTCTaGCAGCTCCATGGCCGACAA +
Preference number: 4 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVEGDLF*QLHGRQ
Trigger: TTGTCGGCCATGGAGCTGGCAGAACAGATCACCCTC...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAAGCTGCCCAATCGCTaGTGGCCCAAAAGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCKLPNR*WPKSLV
Trigger: GACGAGACTTTTGGGCCAGCAGCGATTGGGCAGCTT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGGCACTGTCAGGCTGTTaGTTCTCCACAGTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEALSGC*FSTVSG
Trigger: GCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGC...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCGGAGGGCTCACGGGTaGCCGCCGGTCTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHRRAHG*PPVSPL
Trigger: CAGGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGTCAGGAAGCCGCGCTTaGTGCCCTCCTTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RIFIYDKVFVKQVLCDLWSGSRA*CPPCAP
Trigger: TGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGA...CCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTACAGCGCAGCTCCAGTaGCTTCTGACCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTTAQLQ*LLTFMA
Trigger: GGCCATGAAGGTCAGAAGCCACTGGAGCTGCGCTGT...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp CATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGACCTCTAGCTTTGATTTaGCAAACTCCAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HEHPVDSGARPDLQAGSRPLALI*QTPGFS
Trigger: GGAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGG...TCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTGGCGGATGAACGTTTaGCTGGTGTCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: GARPDLQAGSRGSIFSDSWRMNV*LVSSKM
Trigger: CATCTTGCTGGACACCAGCCAAACGTTCATCCGCCA...GCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCATCTGCTGAGATCCAGTaGTATCTGACCAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKASAEIQ*YLTSVW
Trigger: CCACACACTGGTCAGATACCACTGGATCTCAGCAGA...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCTTCTGAAAATGACATaGTCCAGGAGGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: NIPWTQGQGQIFKQGVEVLLKMT*SRRVIC
Trigger: ACAGATCACCCTCCTGGACCATGTCATTTTCAGAAG...AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACTAAGGTTTTCCAGTTaGAGACTGGGCCTAGGACTC +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKALRFSS*RLGLGL
Trigger: GAGTCCTAGGCCCAGTCTCCAACTGGAAAACCTTAG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGCTCAAATCAATTGCCTaGGGCATTCTCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSELKSIA*GILPSP
Trigger: GGGGGAGGGGAGAATGCCCCAGGCAATTGATTTGAG...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTATGCTTTGAGACCCAGTaGCGGAGGACGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLCFETQ*RRTFRT
Trigger: AGTTCTGAACGTCCTCCGTCACTGGGTCTCAAAGCA...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGGTCCCCAGTCTTATGTaGAAGGGCTTTGAGCAACGC +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEVPSLM*KGFEQR
Trigger: GCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGAC...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TTTGGAGAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATTCTGCATGGTGCGGGTaGGGAGGGCTCACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FGEIDKAFLSKVWCSFFNSAWCG*GGLTGG
Trigger: GCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGA...ATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTCGCTCTTCTGCATGGTaGGGGTGCGGAGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLRSSAW*GCGGLT
Trigger: CGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCG...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTATCATCGCTTGCATCTaGCTCCTCAATCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSIIACI*LLNQCA
Trigger: TGCACATTGATTGAGGAGCCAGATGCAAGCGATGAT...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGAAGGTGAAAGTTCTGTaGTGTCCGCTGCAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMKVKVL*CPLQGS
Trigger: GCTCCCCTGCAGCGGACACCACAGAACTTTCACCTT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGGTGTTGTTAAAGCCTaGTGGACTCCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGGVVKA*WTPMSC
Trigger: GCAGGACATGGGAGTCCACCAGGCTTTAACAACACC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCTGTCTGGAATCCTCTaGGGCACAGCCTACTGCATT +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCLSGIL*GTAYCI
Trigger: AATGCAGTAGGCTGTGCCCCAGAGGATTCCAGACAG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTGGCAGGAAGCCAATGTaGGGACACAGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTGRKPM*GHSLCR
Trigger: TCTGCACAGACTGTGTCCCCACATTGGCTTCCTGCC...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTTCCCAGCCCCCAGGCTaGGGACAGCACAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFSQPPG*GQHKER
Trigger: CCTTTCCTTGTGCTGTCCCCAGCCTGGGGGCTGGGA...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGCTGGTGAACGTACTCTaGCTCTGCCTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKLVNVL*LCLHHG
Trigger: ACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAG...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGCTAACAAGACAACAGTaGAGGCGGCAGCGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLLTRQQ*RRQRQE
Trigger: CTCCTGACGCTGCCGCCTTCACTGTTGTCTTGTTAG...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp GACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCCATGGTCCAGGAGGGTaGTCTGTTCTGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DKAFLSKVWCSFFNKCQVHGPGG*SVLPAP
Trigger: TGGAGCTGGCAGAACAGATCACCCTCCTGGACCATG...GACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTGCCTGGGCAACATGGTaGGACCCTGTTTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCAWATW*DPVFQT
Trigger: TGTTTGAAAAACAGGGTCTCACCATGTTGCCCAGGC...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGGGAAGCCGCGCTTGGTaGCCTCCTTGCGCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKGSRAW*PPCAPE
Trigger: TTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCC...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTCCTCCAGGAGGTACATaGCCGCCGGGCGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCPPGGT*PPGGSS
Trigger: AGAGCTGCCGCCCGGCGGGCATGTACCTCCTGGAGG...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAAGCGTTCGTTCGCAGCTaGAGCCCTCCAGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKAFVRS*SPPGGT
Trigger: TGTACCTCCTGGAGGGCTGCAGCTGCGAACGAACGC...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTATTTTAAAATCCAGGTaGCCAAACACTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PVDSGARPDLQAGSRGSIILKSR*PNTCPE
Trigger: TTCTGGGCAAGTGTTTGGGCACCTGGATTTTAAAAT...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCTTCTGTGGTGTCCGCTaGAGGGGAGCTTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASFCGVR*RGAFHS
Trigger: GGAGTGGAAAGCTCCCCTGCAGCGGACACCACAGAA...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCACTCCCATGTCCTGCTaGAGCTGTGGCTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGTPMSC*SCGYCK
Trigger: TTTGCAATAGCCACAGCTGCAGCAGGACATGGGAGT...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGACTCAGGGCCGGGATaGCTAGGCCAGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGDSGPG*LGQLSF
Trigger: GAAAGAGAGCTGGCCTAGGCATCCCGGCCCTGAGTC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGCAGTCAGAATGTAACTaGCTGCCCCACTCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEQSECN*LPHSCF
Trigger: AAAGCACGAGTGGGGCAGGCAGTTACATTCTGACTG...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTTGGGGACACAGTCTGTaGAGAGGAATAGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTWGHSL*RGIEEA
Trigger: TGCCTCCTCTATTCCTCTGCACAGACTGTGTCCCCA...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCACAGCGCAGCTCCAGTaGCTTCTGACCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASTAQLQ*LLTFMA
Trigger: GGCCATGAAGGTCAGAAGCCACTGGAGCTGCGCTGT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAAAATGTCTGCATAACTaGCTTGGTGAATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAKCLHN*LGEWPP
Trigger: TGGAGGCCATTCACCAAGCCAGTTATGCAGACATTT...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCCTCCCCTCACAGGCTaGATTGGCTTCATACTGTTT +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCPPLTG*IGFILF
Trigger: AAACAGTATGAAGCCAATCCAGCCTGTGAGGGGAGG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGCCTCCCCTCACAGGCTaGATTGGCTTCATACTGTTT +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEPPLTG*IGFILF
Trigger: AAACAGTATGAAGCCAATCCAGCCTGTGAGGGGAGG...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCTTTGCGACACAGACGTaGGGATTTGCCATCCACCAA +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGFATQT*GFAIHQ
Trigger: TTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAA...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCTTTCTGGCCCTCACTaGGGAAGATGTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMLSGPH*GRCSGH
Trigger: GTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCACCAGTGTGTGGTGGTaGAGACGCAGCGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGTSVWW*RRSGTL
Trigger: CAGAGTCCCGCTGCGTCTCCACCACCACACACTGGT...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCGTTCTGCCAGCTCCATaGCCGACAAGGACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLVLPAP*PTRTQS
Trigger: GCTTTGAGTCCTTGTCGGCCATGGAGCTGGCAGAAC...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGGTAAGAGCTGTTCGGTaGTTGGGCCCATTTCCCATG +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMVRAVR*LGPFPM
Trigger: CATGGGAAATGGGCCCAACCACCGAACAGCTCTTAC...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAACCTACACCTCACTTaGCAAGTGTTAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCNLHLT*QVLGHS
Trigger: GCTGTGGCCTAACACTTGCCAAGTGAGGTGTAGGTT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTCCGACCGGTCCTCCTTaGAGCTGCAGAGAATGTCCG +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFPTGPP*SCRECP
Trigger: CGGACATTCTCTGCAGCTCCAAGGAGGACCGGTCGG...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATCCTGGGCCTTGGCCTaGGTATCGTCAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKSWALA*VSSALG
Trigger: GCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR CAA 72 bp CTTTCACCTTCCCACCCAAGTCTGAAGCATCTGTCTTaGACCCAAACAGCTGGGTTTCTCTCTGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LSPSHPSLKHLS*TQTAGFLSGDR
Trigger: TCTGTCTCCAGAGAGAAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAGACTTGGGTGGGAAGGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 72 bp CCAAGGCAGAGTAGAATGCATGCACCTTTCCACGTGTaGTTTGGCCCGAAACTAGTATGTGTGTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRQSRMHAPFHV*FGPKLVCVWSS
Trigger: AGAGGACCACACACATACTAGTTTCGGGCCAAACAACACGTGGAAAGGTGCATGCATTCTACTCTGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGTCCACACACTGACTaGTGTCACTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLCPHTD*CHSSRQ
Trigger: CTGCCTGGATGAGTGACATCAGTCAGTGTGTGGACA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTCAGTGTCGTCTTTATaGAGACGGGCATCAGACTTA +
Preference number: 4 (lower is better)
Translates to: LCDLWLMIYSVGSLLELASVSSL*RRASDL
Trigger: TAAGTCTGATGCCCGTCTTCATAAAGACGACACTGA...CGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGCTTTGAGACCCAGTaGCGGAGGACGTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLCFETQ*RRTFRT
Trigger: AGTTCTGAACGTCCTCCGTCACTGGGTCTCAAAGCA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ATGCCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTGCAGGAGGGTTACAACCGTTGGCACGGGAGCTaGCATCAGCATAGTTCATTA +
Preference number: 4 (lower is better)
Translates to: MPGLSSTSQDKELQEGYNRWHGS*HQHSSL
Trigger: TAATGAACTATGCTGATGTCAGCTCCCGTGCCAACG...GTTGTAACCCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGAGGACAGTAATCAGATaGCCTCATGTGCGGACAGCA +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMRTVIR*PHVRTA
Trigger: TGCTGTCCGCACATGAGGTCATCTGATTACTGTCCT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGGAAGCCGCGCTTGGTaGCCTCCTTGCGCGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHGSRAW*PPCAPE
Trigger: TTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAGGTGCCCAAACACTTaGCCAGAACCTTTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCRCPNT*PEPLES
Trigger: TGACTCTAAAGGTTCTGGGCAAGTGTTTGGGCACCT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAAGGTGCCCAAACACTTaGCCAGAACCTTTAGAGTCA +
Preference number: 4 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVRCPNT*PEPLES
Trigger: TGACTCTAAAGGTTCTGGGCAAGTGTTTGGGCACCT...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTCCTTCTTCAATAAATaGCAGGTCTGTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: PVDSGARPDLQAGSRGSISFFNK*QVCQVH
Trigger: ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGA...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGTGCCTGCCCCACTCGTaGTTTACTATGATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSECLPHS*FTMIVL
Trigger: CAACACAATCATAGTAAAGCACGAGTGGGGCAGGCA...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGCAGAATGTAACTGCCTaGCCCACTCGTGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEQNVTA*PTRALL
Trigger: TAGTAAAGCACGAGTGGGGCAGGCAGTTACATTCTG...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGCACGCTCTTCTGCATaGTGCGGGTGCGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHARSSA*CGCGGL
Trigger: GAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTCAGGAAGCCGCGCTTaGTGCCCTCCTTGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHSGSRA*CPPCAP
Trigger: TGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACATCGTGCATTACTCTaGATAGTTCCTCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAHRALL*IVPLAL
Trigger: CAAAGCTAGAGGAACTATCCAGAGTAATGCACGATG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTAGAGGCGCTCCACGCTaGCATAACGGATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLRGAPR*HNGSGA
Trigger: TGCCCCAGATCCGTTATGCCAGCGTGGAGCGCCTCT...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGGACACAGCCAGTGGTaGCGGGGAAGAGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGGHSQW*RGREFA
Trigger: CGCAAATTCTCTTCCCCGCCACCACTGGCTGTGTCC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCCTGGGGAAGATGTTCTaGACACAGCCAGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGLGKMF*TQPVVA
Trigger: CGCCACCACTGGCTGTGTCCAGAACATCTTCCCCAG...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCCTGGGGAAGATGTTCTaGACACAGCCAGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGLGKMF*TQPVVA
Trigger: CGCCACCACTGGCTGTGTCCAGAACATCTTCCCCAG...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGGTGGTGGGACTGCTaGAAGTTGTCAGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLWWWDC*KLSGPM
Trigger: CATTGGACCTGACAACTTCCAGCAGTCCCACCACCA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCAGCGGGACTCTGGGTaGTGGTGGTGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHQRDSG*WWWDCW
Trigger: CCAGCAGTCCCACCACCACCACCCAGAGTCCCGCTG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCTATCTGACCAGTGTGTaGTGGTGGAGACGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGYLTSV*WWRRSG
Trigger: CCCGCTGCGTCTCCACCACCACACACTGGTCAGATA...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTCCCGGGCTTTGCTCTaGAGAAGAGAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGSRALL*RREASA
Trigger: AGCAGAGGCCTCTCTTCTCCAGAGCAAAGCCCGGGA...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCACACAGATCCACGCGTaGGTTATCGACATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGTQIHA*VIDILF
Trigger: GAAGAGAATGTCGATAACCCACGCGTGGATCTGTGT...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCGGTGAAACAGAGCAGTaGGCATTGTCCGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASGETEQ*ALSAVC
Trigger: ACAGACGGCGGACAATGCCCACTGCTCTGTTTCACC...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTTTGGGGAAGAAGGTCTaGGTCTCGCAAAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCLGKKV*VSQNFF
Trigger: GAAGAAGTTTTGCGAGACCCAGACCTTCTTCCCCAA...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAAGGTGGATGTCATCTTaGTCATCTTGTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLRWMSS*SSCERA
Trigger: GGCCCTTTCACAAGATGACCAAGATGACATCCACCT...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTRPSSVKFGVPSSINARSMNIP*TQGQGQ
Trigger: CTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGA...CCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGTGGTTCCATCTTCTTTaGTGGAGAAAGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMWFHLL*WRKEPG
Trigger: GCCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCA...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTGGTATCGTCAGCACTTaGCACTGCCACGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTGIVST*HCHGRG
Trigger: CCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACC...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTGTTTCTCCTGGGCCTTaGCCTGGGTATCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFVSPGP*PGYRQH
Trigger: GTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAAC...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGCTGCCTCCACCATGGTaGACACAATCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLLPPPW*TQSGFS
Trigger: AGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAG...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGTGTTTTCAGTGTCGCTaGCTTCATCGTGCATTACTC +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSECFQCR*LHRALL
Trigger: GAGTAATGCACGATGAAGTCAGCGACACTGAAAACA...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGGAGAACCTTGGCGGATaGACGTTTGGCTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLENLGG*TFGWCP
Trigger: TGGACACCAGCCAAACGTTCATCCGCCAAGGTTCTC...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCTGTCCACACACTGACTaGTGTCACTCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RPSSVKFGVPSSINARSVCPHTD*CHSSRQ
Trigger: CTGCCTGGATGAGTGACATCAGTCAGTGTGTGGACA...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCATCATATGTGGCACAGTaGCTTTGGAATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKASYVAQ*LWNSLQ
Trigger: TTGAAGAGAATTCCAAAGTCACTGTGCCACATATGA...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CAAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTAAAAGCAGAAGCCGGTaGAACAGAGCAGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: QASTVRPLADDLFCRKSAKSRSR*NRAVGI
Trigger: AATGCCCACTGCTCTGTTTCACCGGCTTCTGCTTTT...AGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCATGGATCCTTGTCCCTaGGTTCTAACAGAACATGGA +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGMDPCP*VLTEHG
Trigger: TCCATGTTCTGTTAGAACTCAGGGACAAGGATCCAT...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCTCACAATAGCCCTGTaGGATAAGCAGCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLLTIAL*DKQHRD
Trigger: ATCCCTGTGCTGCTTATCTCACAGGGCTATTGTGAG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCCACTCTTTACCATCCTaGTCCTCCTCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGHSLPS*SSSQRS
Trigger: GCTGCGCTGTGAGGAGGAGCAGGATGGTAAAGAGTG...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGATCAAAATCTCTGTTTTaGTTACAATTGGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: HEHPVDSGARPDLQAGSRSKSLF*LQLART
Trigger: AGTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGA...TCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGTCGCTGACTTCATCGTaGATTACTCTGGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSESLTSS*ITLDSS
Trigger: GGAACTATCCAGAGTAATGCACGATGAAGTCAGCGA...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAACCGTTCCCGGGCTTTaGTCTGGAGAAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGTVPGL*SGEERP
Trigger: AGGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCTGGACTCCCATGTCCTaGTGCAGCTGTGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGWTPMS*CSCGYC
Trigger: GCAATAGCCACAGCTGCAGCAGGACATGGGAGTCCA...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGCAGATGTCCGCCACTaGCACCCATTTCTCGATGGC +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLADVRH*HPFLDG
Trigger: GCCATCGAGAAATGGGTGGCAGTGGCGGACATCTGC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAATGAGAATAGATTCCTaGAGTACTATGAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAMRIDS*STMSGE
Trigger: TTCCCCACTCATAGTACTGCAGGAATCTATTCTCAT...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTTTGTCTCAAATCAATTaGCTGGGGCATTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTLSQIN*LGHSPL
Trigger: GAGGGGAGAATGCCCCAGGCAATTGATTTGAGACAA...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp GGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTAAATGTCTGCATAACTaGCTTGGTGAATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQGQIFKQGVEVQFLVTAKCLHN*LGEWPP
Trigger: TGGAGGCCATTCACCAAGCCAGTTATGCAGACATTT...AGCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCTGGCGGATGAACGTTTaGCTGGTGTCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASWRMNV*LVSSKM
Trigger: CATCTTGCTGGACACCAGCCAAACGTTCATCCGCCA...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGGTGGTGGGACTGCTaGAAGTTGTCAGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: DKAFLSKVWCSFFNKCQVWWWDC*KLSGPM
Trigger: CATTGGACCTGACAACTTCCAGCAGTCCCACCACCA...GACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGGCGGCTTTCCTTTCTTaGGGAAGAAGGTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMAAFLS*GRRSGS
Trigger: AGACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGC...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGAGGTGGATGTCATCTTaGTCATCTTGTGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMRWMSS*SSCERA
Trigger: GGCCCTTTCACAAGATGACCAAGATGACATCCACCT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGGAAGTCTGCTGGAACTaGCGTATCTCTCTGATGATG +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMEVCWN*RISLMM
Trigger: CATCATCAGAGAGATACGCCAGTTCCAGCAGACTTC...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCAGCCAGCCACTGTCTaGAATCCTCTGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASQPATV*NPLGHS
Trigger: GCTGTGCCCCAGAGGATTCCAGACAGTGGCTGGCTG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCACACTCCCTCAGAGGTaGAGCTCTCTCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGTLPQR*SSLSCP
Trigger: AGGGCAAGAGAGAGAGCTCCACCTCTGAGGGAGTGT...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCCATTCCTCTCCCAGCTaGCACACGAATAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASHSSPS*HTNSAG
Trigger: ACCTGCACTATTCGTGTGCCAGCTGGGAGAGGAATG...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCAGAGGCAGATGCAGCTaGGAATGCATGCTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLRGRCS*ECMLCV
Trigger: CACACAAAGCATGCATTCCCAGCTGCATCTGCCTCT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAAACAGTAATGGGACTTaGTATGAGAGCCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKANSNGT*YESHLK
Trigger: TTTCAAGTGGCTCTCATACCAAGTCCCATTACTGTT...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTAACGCAAGTTTCTCCTaGGCCTTGGCCTGGGTATCG +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFNASFS*ALAWVS
Trigger: CGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTT...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCATCAAATTATATCGTGTaGGGCGGATCCGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: NLSSDAPKAHFANTTASASNYIV*GGSGSA
Trigger: AGCACTTCCGGATCCGCCCCACACGATATAATTTGA...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTGAAAGGCACAGAGGCTaGCAGGCAGGAAGCCAATGT +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFERHRG*QAGSQC
Trigger: ACATTGGCTTCCTGCCTGCCAGCCTCTGTGCCTTTC...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp AATAAATGCCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTGCAGGAGGGTTCCTGTCTTGAGCAGATaGAGCTTCCCTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: NKCQVCQVHPKIRNCRRVPVLSR*SFPPEL
Trigger: AAGTTCAGGAGGGAAGCTTCATCTGCTCAAGACAGG...AACCCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCAGATCCAGTGGTATCTaGCCAGTGTGTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGRSSGI*PVCGGG
Trigger: TCCACCACCACACACTGGTCAGATACCACTGGATCT...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCAAAAGCAGAAGCCGGTaGAACAGAGCAGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASKSRSR*NRAVGI
Trigger: AATGCCCACTGCTCTGTTTCACCGGCTTCTGCTTTT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACTCTCTGATGATGTGTaGTATCATTCTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKALSDDV*YHSHFG
Trigger: TCCAAAATGAGAATGATATCACACATCATCAGAGAG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGAACCCTCCTTGGGTTaGGTGCTACACTGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGEPSLG*VLHCWL
Trigger: TAGCCAACAGTGTAGCACTCAACCCAAGGAGGGTTC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACAGTTTCTGGAGCACTaGGAAATAAATCACAAGTTA +
Preference number: 4 (lower is better)
Translates to: FFGGERSLASCCTVIGKAQFLEH*EINHKL
Trigger: TAACTTGTGATTTATTTCTCAGTGCTCCAGAAACTG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAACGGGAGTTACCAGTTaGATCAAATTATATCGTGTG +
Preference number: 4 (lower is better)
Translates to: AHFANTTASALPKRGKCPTGVTS*IKLYRV
Trigger: CACACGATATAATTTGATTCAACTGGTAACTCCCGT...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTGCGGGGAAGAGAATTTaGGACACAGACGTGGGGATT +
Preference number: 4 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCAGKRI*DTDVGI
Trigger: AATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGC...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTTGGTGGTGGTGGGACTaGTGGAAGTTGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPWWWWD*WKLSGP
Trigger: TGGACCTGACAACTTCCAGCAGTCCCACCACCACCA...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGGTGCGGACAGCACTTTaGAGTTTACAGTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMVRTAL*SLQSNP
Trigger: TGGATTAGACTGTAAACTGCAAAGTGCTGTCCGCAC...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCAAAATGTCTGCATAACTaGCTTGGTGAATGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NLSSDAPKAHFANTTASAKCLHN*LGEWPP
Trigger: TGGAGGCCATTCACCAAGCCAGTTATGCAGACATTT...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGTGGGGATCTGAAACATaGGATAGGTCAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSEWGSET*DRSRMS
Trigger: AGACATTCTTGACCTATCCCATGTTTCAGATCCCCA...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp GGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTCATCGTGCATTACTCTaGATAGTTCCTCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GQGQIFKQGVEVQFLVTAHRALL*IVPLAL
Trigger: CAAAGCTAGAGGAACTATCCAGAGTAATGCACGATG...AGCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATGGCGGATGAACGTTTaGCTGGTGTCCAGCAAGATG +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKWRMNV*LVSSKM
Trigger: CATCTTGCTGGACACCAGCCAAACGTTCATCCGCCA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGGGACACAGCCAGTGGTaGCGGGGAAGAGAATTTGCG +
Preference number: 4 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKGHSQW*RGREFA
Trigger: CGCAAATTCTCTTCCCCGCCACCACTGGCTGTGTCC...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTCCCGGGCTTTGCTCTaGAGAAGAGAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASSRALL*RREASA
Trigger: AGCAGAGGCCTCTCTTCTCCAGAGCAAAGCCCGGGA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CAAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTACACAGATCCACGCGTaGGTTATCGACATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QASTVRPLADDLFCRKSATQIHA*VIDILF
Trigger: GAAGAGAATGTCGATAACCCACGCGTGGATCTGTGT...AGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCCCAAGGTTCTGCCAGCTCCATaGCCGACAAGGACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KVWCSFFNKCQVCQVHPKVLPAP*PTRTQS
Trigger: GCTTTGAGTCCTTGTCGGCCATGGAGCTGGCAGAAC...CTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCCTCTCCAAAAGGGCTaGCTTCTTAGGACCAACAGT +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMPLQKG*LLRTNS
Trigger: ACTGTTGGTCCTAAGAAGCCAGCCCTTTTGGAGAGG...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGGTTTTGTCGGTGAGATaGGCGTGCACCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMVLSVR*ACTFLQ
Trigger: CTGCAAAAAGGTGCACGCCCATCTCACCGACAAAAC...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGAGCTGTTCGGTGGTTaGGCCCATTTCCCATGCACT +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLELFGG*AHFPCT
Trigger: AGTGCATGGGAAATGGGCCCAACCACCGAACAGCTC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCATTCTCTACCTCTATaGTGCATTACCAATGCTAGC +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGHSLPL*CITNAS
Trigger: GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCTGTGCACATTAGCCTaGCTATACCCTTCAGCCATA +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLLCTLA*LYPSAI
Trigger: TATGGCTGAAGGGTATAGCCAGGCTAATGTGCACAG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGTTTTTCATGGTCCCTTaGCGGATGAACGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKFFMVP*RMNVWL
Trigger: CAGCCAAACGTTCATCCGCCAAGGGACCATGAAAAA...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCAGGCACAAAAGAAATaGATAAGGACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTQAQKK*IRTFPA
Trigger: GGCTGGGAATGTCCTTATCCATTTCTTTTGTGCCTG...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTAGCTCCAGTGGCTTCTaGCCTTCATGGCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFSSSGF*PSWPKR
Trigger: TCTTTTTGGCCATGAAGGTCAGAAGCCACTGGAGCT...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTAGATCCAGTGGTATCTaGCCAGTGTGTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLRSSGI*PVCGGG
Trigger: TCCACCACCACACACTGGTCAGATACCACTGGATCT...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTCTAGGACTGCTTTTTaGATACTTCGTTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GARPDLQAGSRGSIFSDSSRTAF*ILRFSL
Trigger: CAAGCTAAAACGAAGTATTCAAAAAGCAGTCCTAGA...GCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGGGGGATCTGCAAGGTaGAAGTTCTGTGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHGGSAR*KFCGVR
Trigger: GCGGACACCACAGAACTTTCACCTTGCAGATCCCCC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTTCTTTAGTTCATTGTTaGGTTCGAAATCCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCSLVHC*VRNPVR
Trigger: ACGCACAGGATTTCGAACTCAACAATGAACTAAAGA...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCATCTTGGTCATCTTGTaGAAGGGCCCTGAGGATATT +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLILVIL*KGPEDI
Trigger: AATATCCTCAGGGCCCTTTCACAAGATGACCAAGAT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGCTCTCTGATGATGTGTaGTATCATTCTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: LCDLWLMIYSVGSLLELALSDDV*YHSHFG
Trigger: TCCAAAATGAGAATGATATCACACATCATCAGAGAG...CGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACCACAGTTTTGTCGGTaGGATGGGCGTGCACCTTTT +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGPQFCR*DGRAPF
Trigger: AAAAGGTGCACGCCCATCTCACCGACAAAACTGTGG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTGGCATTACAAGGGCCTaGTGTTGTCAGCATTATATT +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTGITRA*CCQHYI
Trigger: AATATAATGCTGACAACATCAGGCCCTTGTAATGCC...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGCGTTCGTTCGCAGCTaGAGCCCTCCAGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSAFVRS*SPPGGT
Trigger: TGTACCTCCTGGAGGGCTGCAGCTGCGAACGAACGC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTCACTCTTTACCATCCTaGTCCTCCTCACAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTHSLPS*SSSQRS
Trigger: GCTGCGCTGTGAGGAGGAGCAGGATGGTAAAGAGTG...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCAGAGTCATCATCGCTTaGATCTGGCTCCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLRVIIA*IWLLNQ
Trigger: TTGATTGAGGAGCCAGATGCAAGCGATGATGACTCT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGACAGACGTGGGGATTTaGCATCCACCAAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMTDVGI*HPPNVH
Trigger: GTGAACATTTGGTGGATGGCAAATCCCCACGTCTGT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTACTCCCATGTCCTGCTaGAGCTGTGGCTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCTPMSC*SCGYCK
Trigger: TTTGCAATAGCCACAGCTGCAGCAGGACATGGGAGT...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCTAATGTTAATGTCATaGTGCATGGCAGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMLMLMS*CMAAEM
Trigger: CATCTCAGCTGCCATGCAGCATGACATTAACATTAG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGAAACACGACAGCTTCTaGATTACCAAAGCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKKHDSF*ITKAWQ
Trigger: TTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTT...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTTGTTTTGCTTACAATTaGCGAGAACTTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTCFAYN*RELAGC
Trigger: ACAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACA...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCACCTCACAGGCTGGATTaGCTTCATACTGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NLSSDAPKAHFANTTASAPHRLD*LHTVLR
Trigger: TCTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGG...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCCTCCCCTCACAGGCTaGATTGGCTTCATACTGTTT +
Preference number: 4 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCPPLTG*IGFILF
Trigger: AAACAGTATGAAGCCAATCCAGCCTGTGAGGGGAGG...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGCCTCTAGCTTTGATTTaGCAAACTCCAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKPLALI*QTPGFS
Trigger: GGAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGG...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp GAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGCAGCTTTCTCCTaGCGTGAGGGTGCTAACAAG +
Preference number: 4 (lower is better)
Translates to: EIDKAFLSKVWCSFFNKCQAAFS*REGANK
Trigger: CTTGTTAGCACCCTCACGCCAGGAGAAAGCTGCCTG...GCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTCTGCTGAGATCCAGTaGTATCTGACCAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGSAEIQ*YLTSVW
Trigger: CCACACACTGGTCAGATACCACTGGATCTCAGCAGA...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATGGTGAAACAGAGCAGTaGGCATTGTCCGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHGETEQ*ALSAVC
Trigger: ACAGACGGCGGACAATGCCCACTGCTCTGTTTCACC...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCTTGGGGAAGAAGGTCTaGGTCTCGCAAAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: RPSSVKFGVPSSINARSVLGKKV*VSQNFF
Trigger: GAAGAAGTTTTGCGAGACCCAGACCTTCTTCCCCAA...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGACAGCTCCTCTAATTTTAGGTaGATGTCATCTTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: GARPDLQAGSRGSIFSDSSSNFR*MSSWSS
Trigger: AGATGACCAAGATGACATCCACCTAAAATTAGAGGA...GCTGTCACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCGAAGTCTGCTGGAACTaGCGTATCTCTCTGATGATG +
Preference number: 4 (lower is better)
Translates to: DKAFLSKVWCSFFNKCQVEVCWN*RISLMM
Trigger: CATCATCAGAGAGATACGCCAGTTCCAGCAGACTTC...GACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCATTTTCACTTCGGACATaGTCCCCAGTCTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: NLSSDAPKAHFANTTASAFSLRT*SPVLCE
Trigger: TTCACATAAGACTGGGGACCATGTCCGAAGTGAAAA...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTAGCTCCAGTGGCTTCTaGCCTTCATGGCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPSSSGF*PSWPKR
Trigger: TCTTTTTGGCCATGAAGGTCAGAAGCCACTGGAGCT...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCCCAAGAGCTCCAGTGGCTTCTaGCCTTCATGGCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: KVWCSFFNKCQVCQVHPKSSSGF*PSWPKR
Trigger: TCTTTTTGGCCATGAAGGTCAGAAGCCACTGGAGCT...CTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCTGGTGAACGTACTCTaGCTCTGCCTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHLVNVL*LCLHHG
Trigger: ACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGAGAACCTTGGCGGATaGACGTTTGGCTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHENLGG*TFGWCP
Trigger: TGGACACCAGCCAAACGTTCATCCGCCAAGGTTCTC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTCCTGTCTTGAGCAGATaGAGCTTCCCTCCTGAACTT +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLPVLSR*SFPPEL
Trigger: AAGTTCAGGAGGGAAGCTTCATCTGCTCAAGACAGG...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCTCTAGGACTGCTTTTTaGATACTTCGTTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGSRTAF*ILRFSL
Trigger: CAAGCTAAAACGAAGTATTCAAAAAGCAGTCCTAGA...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGATATTTAGAATGCACTaGCAACCATGCACATGCTGT +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMIFRMH*QPCTCC
Trigger: ACAGCATGTGCATGGTTGTCAGTGCATTCTAAATAT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGGCTCCTCAATCAATGTaGAGTCTATTAGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMAPQSM*SLLETE
Trigger: TTCTGTCTCTAATAGACTGCACATTGATTGAGGAGC...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGATTTTAAAATCCAGGTaGCCAAACACTTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMILKSR*PNTCPE
Trigger: TTCTGGGCAAGTGTTTGGGCACCTGGATTTTAAAAT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTTGGTGGTGGTGGGACTaGTGGAAGTTGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCWWWWD*WKLSGP
Trigger: TGGACCTGACAACTTCCAGCAGTCCCACCACCACCA...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATAGGAGCCTGGCTTCGTaGTGTACCGTGATAGGCAAG +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHRSLAS*CTVIGK
Trigger: CTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCCTTTACTTTTCTTCTaGAAGACCTTGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMPLLFF*KTLRCL
Trigger: CAAACACCTCAAGGTCTTGCAGAAGAAAAGTAAAGG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGATTCTCAAACAAAAATaGGAAAGGCTAGTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMILKQK*ERLVSG
Trigger: GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAAT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATGGACTAGAGGCAGATaGAGCTGGGAATGCATGCTT +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGWTRGR*SWECML
Trigger: AAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAAGCACCAGGAGTAAAGTaGCTTGGAAACAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKAPGVK*LGNKWK
Trigger: CTTCCACTTGTTTCCAAGGCACTTTACTCCTGGTGC...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCAGCTAAAATTAAAGTaGGCCAGTTTGCTATCCTTG +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTQLKLK*ASLLSL
Trigger: CAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTG...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCCCTCTAGCTTTGATTTaGCAAACTCCAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASPLALI*QTPGFS
Trigger: GGAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGG...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGATCATCGCTTGCATCTaGCTCCTCAATCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMIIACI*LLNQCA
Trigger: TGCACATTGATTGAGGAGCCAGATGCAAGCGATGAT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCTTTCTGGCCCTCACTaGGGAAGATGTTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHLSGPH*GRCSGH
Trigger: GTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAG...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTAGGTGTTGTTAAAGCCTaGTGGACTCCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLSKVWCSFFNKCQVCQVGVVKA*WTPMSC
Trigger: GCAGGACATGGGAGTCCACCAGGCTTTAACAACACC...TACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCATAAGGAACCCTCCTTaGGTTGAGTGCTACACTGTT +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASIRNPP*VECYTV
Trigger: AACAGTGTAGCACTCAACCCAAGGAGGGTTCCTTAT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGTCTCTGGAACATTTaGGTCAAAGAAATGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLCLWNI*VKEMSP
Trigger: CGGACTCATTTCTTTGACCCAAATGTTCCAGAGACA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGTACATGTTCGCTACTTaGCTGTTAGAGGTTGACCTC +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMYMFAT*LLEVDL
Trigger: GAGGTCAACCTCTAACAGCCAAGTAGCGAACATGTA...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATGCATTACCAAAGCGTaGCAAGTGTCCATCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKCITKA*QVSIRD
Trigger: GTCTCTGATGGACACTTGCCACGCTTTGGTAATGCA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTAGGAGTAAAGTGCCTTaGAAACAAGTGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RHCQAVASPQFPAQISSTRSKVP*KQVEGK
Trigger: TTTACCTTCCACTTGTTTCCAAGGCACTTTACTCCT...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCTGCCTCCACCATGGTaGACACAATCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASLPPPW*TQSGFS
Trigger: AGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGTGTTTTCAGTGTCGCTaGCTTCATCGTGCATTACTC +
Preference number: 4 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLCFQCR*LHRALL
Trigger: GAGTAATGCACGATGAAGTCAGCGACACTGAAAACA...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTCTAACAAGACAACAGTaGAGGCGGCAGCGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSLTRQQ*RRQRQE
Trigger: CTCCTGACGCTGCCGCCTTCACTGTTGTCTTGTTAG...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATAAGAGAGGCCTCTGCTaGGATCCAGTGGTATCTGAC +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHKRGLC*DPVVSD
Trigger: GTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CAAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTTCTTTAGTTCATTGTTaGGTTCGAAATCCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: QASTVRPLADDLFCRKSASLVHC*VRNPVR
Trigger: ACGCACAGGATTTCGAACTCAACAATGAACTAAAGA...AGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCGTTGGCACGGGAGCTaGCATCAGCATAGTTCATTA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASRWHGS*HQHSSL
Trigger: TAATGAACTATGCTGATGTCAGCTCCCGTGCCAACG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCAGCTTTGTCACTAGTTaGAGAAAAGCTGCGATCCAA +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASSFVTS*RKAAIQ
Trigger: TTGGATCGCAGCTTTTCTTCAACTAGTGACAAAGCT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGGCAGGAAGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSGRKIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCTTCCTGCC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATATGTGAAAGGGCTTTaGGCAACGCAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKYVKGL*ATQVSP
Trigger: AGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATA...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTATACAAGCAAGAGGATaGAATACACGCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFIQARG*NTRTRS
Trigger: ACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTAT...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCTCAATCAAAATGTCTaGATAACTGGCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMLNQNV*ITGLVN
Trigger: ATTCACCAAGCCAGTTATGCAGACATTTTGATTGAG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGTCAAAATCTCTGTTTTaGTTACAATTGGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: FANTTASALPKRGKCPSESKSLF*LQLART
Trigger: AGTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGA...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGCTCCTCAATCAATGTaGAGTCTATTAGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLAPQSM*SLLETE
Trigger: TTCTGTCTCTAATAGACTGCACATTGATTGAGGAGC...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp CGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGAGAGTCATCATCGCTTaGATCTGGCTCCTCAATCAA +
Preference number: 4 (lower is better)
Translates to: RIFIYDKVFVKQVLCDLWRVIIA*IWLLNQ
Trigger: TTGATTGAGGAGCCAGATGCAAGCGATGATGACTCT...CCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGAGGGTGATCTGTTCTaGCAGCTCCATGGCCGACAA +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSEGDLF*QLHGRQ
Trigger: TTGTCGGCCATGGAGCTGGCAGAACAGATCACCCTC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCCCATGCTTCTCATCATaGATCAAGATGCGTCAACCT +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGPCFSS*IKMRQP
Trigger: AGGTTGACGCATCTTGATGCATGATGAGAAGCATGG...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGTGGGGATCTGAAACATaGGATAGGTCAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMWGSET*DRSRMS
Trigger: AGACATTCTTGACCTATCCCATGTTTCAGATCCCCA...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGCATCGTGCATTACTCTaGATAGTTCCTCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QAVASPQFPAQISSTLQKHRALL*IVPLAL
Trigger: CAAAGCTAGAGGAACTATCCAGAGTAATGCACGATG...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTCAGGCAGCTTTCTCCTaGCGTGAGGGTGCTAACAAG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSQAAFS*REGANK
Trigger: CTTGTTAGCACCCTCACGCCAGGAGAAAGCTGCCTG...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCTTTGCGACACAGACGTaGGGATTTGCCATCCACCAA +
Preference number: 4 (lower is better)
Translates to: EIDKAFLSKVWCSFFNKCFATQT*GFAIHQ
Trigger: TTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAA...GCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGTCCTCTAATTTTAGGTaGATGTCATCTTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMSSNFR*MSSWSS
Trigger: AGATGACCAAGATGACATCCACCTAAAATTAGAGGA...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAAATTGCTTATGTTTTaGTCCATCTCTGTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCKLLMF*SISVEE
Trigger: TTCCTCTACAGAGATGGACCAAAACATAAGCAATTT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCAGTTACATACAGAGATaGCACTTACCGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASSYIQR*HLPCRK
Trigger: CTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACT...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTATTATTCACTCCACATaGGACCATAATGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: GLHNGLEADAAGNACFVCIIHST*DHNGFF
Trigger: GAAAAATCCATTATGGTCCCATGTGGAGTGAATAAT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCTGCCCAATCGCTGCTaGCCCAAAAGTCTCGTCTTA +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHLPNRC*PKSLVL
Trigger: TAAGACGAGACTTTTGGGCCAGCAGCGATTGGGCAG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATCAGTGTCGTCTTTATaGAGACGGGCATCAGACTTA +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGSVSSL*RRASDL
Trigger: TAAGTCTGATGCCCGTCTTCATAAAGACGACACTGA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGCAATGCTCCTATCTTTaGGTTCAAGGGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LTRPSSVKFGVPSSINARQCSYL*VQGRSQ
Trigger: TTGACTTCTCCCTTGAACTCAAAGATAGGAGCATTG...CCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGACTCGTGCTTTACTATaGTTGTGTTGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKTRALL*LCCCFS
Trigger: TGAAAAACAGCAACACAATCATAGTAAAGCACGAGT...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR TCA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTTACGTCTTGCATTTTaGAATAACAGCCGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QAVASPQFPAQISSTLQKLRLAF*NNSRGE
Trigger: TTCTCCTCGGCTGTTATTTCAAAATGCAAGACGTAA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGCTCAATCAAAATGTCTaGATAACTGGCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLLNQNV*ITGLVN
Trigger: ATTCACCAAGCCAGTTATGCAGACATTTTGATTGAG...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGTCAAAATCTCTGTTTTaGTTACAATTGGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMSKSLF*LQLART
Trigger: AGTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGA...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGCAGCTGGGAATGCATaGTTTGTGTGTAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHAAGNA*FVCRQK
Trigger: CTTCTGCCTACACACAAAGCATGCATTCCCAGCTGC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCAATCTTCTTGATGTCTaGATCTTCGTCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLNLLDV*IFVFLV
Trigger: AACCAAGAAGACGAAGATCCAGACATCAAGAAGATT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CAAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTAATCTTCTTGATGTCTaGATCTTCGTCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QASTVRPLADDLFCRKSANLLDV*IFVFLV
Trigger: AACCAAGAAGACGAAGATCCAGACATCAAGAAGATT...AGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AATAAATGCCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTGCAGGAGGGTTCAGCTAAAATTAAAGTaGGCCAGTTTGCTATCCTTG +
Preference number: 4 (lower is better)
Translates to: NKCQVCQVHPKIRNCRRVQLKLK*ASLLSL
Trigger: CAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTG...AACCCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTGGGGATCTGAAACATaGGATAGGTCAAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LTRPSSVKFGVPSSINARWGSET*DRSRMS
Trigger: AGACATTCTTGACCTATCCCATGTTTCAGATCCCCA...CCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGCGATCATTCTTTCGATaGCAAGGTTTTTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKRSFFR*QGFSLC
Trigger: ACATAAGGAAAAACCTTGCCATCGAAAGAATGATCG...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTCAAAGACAGCTTTCTaGCCCTCACTGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHSKTAF*PSLGKM
Trigger: CATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTTCAAAGACAGCTTTCTaGCCCTCACTGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCSKTAF*PSLGKM
Trigger: CATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGA...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACTTCTGAAAATGACATaGTCCAGGAGGGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGLLKMT*SRRVIC
Trigger: ACAGATCACCCTCCTGGACCATGTCATTTTCAGAAG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTATCTTCAGCCTGTAGATaGCACTTCTGTTTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: FLSKVWCSFFNKCQVCQVSSACR*HFCLRP
Trigger: CGGCCTTAAACAGAAGTGCCATCTACAGGCTGAAGA...TACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCCCTGCTTTGTTAAAATaGCAACTAGCATCTCCCATC +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGPALLK*QLASPI
Trigger: GATGGGAGATGCTAGTTGCCATTTTAACAAAGCAGG...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTATTCCCCACAGCACTTaGTGGCCTTCTGTTCCACAG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSIPHST*WPSVPQ
Trigger: CTGTGGAACAGAAGGCCACCAAGTGCTGTGGGGAAT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCGCAGACTCCAGAAAGTaGTGTAATTCTCAAACAAAA +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLADSRK*CNSQTK
Trigger: TTTTGTTTGAGAATTACACCACTTTCTGGAGTCTGC...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTTCAACGGAAGGTACTTaGATAAGAGAACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCSTEGT*IREPWR
Trigger: CCGCCAAGGTTCTCTTATTCAAGTACCTTCCGTTGA...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTCAATGCTCCTATCTTTaGGTTCAAGGGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPQCSYL*VQGRSQ
Trigger: TTGACTTCTCCCTTGAACTCAAAGATAGGAGCATTG...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCATCTTGGTCATCTTGTaGAAGGGCCCTGAGGATATT +
Preference number: 4 (lower is better)
Translates to: EIDKAFLSKVWCSFFNKCILVIL*KGPEDI
Trigger: AATATCCTCAGGGCCCTTTCACAAGATGACCAAGAT...GCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGAGGGAGGTAAACAATaGGATAGCCCTATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLEGGKQ*DSPISS
Trigger: TGAAGAAATAGGGCTATCTCATTGTTTACCTCCCTC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGAACTATTATTTTCCTTaGGCAGATCAGACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMNYYFP*ADQTSA
Trigger: AGCACTAGTCTGATCTGCTCAAGGAAAATAATAGTT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTTGGAGAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATTCGCTGACTTCATCGTaGATTACTCTGGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: FGEIDKAFLSKVWCSFFNSLTSS*ITLDSS
Trigger: GGAACTATCCAGAGTAATGCACGATGAAGTCAGCGA...ATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTAGCATTCGGCCTTCATaGAGTCAGTCATTTGAATTA +
Preference number: 4 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCSIRPS*SQSFEL
Trigger: TAATTCAAATGACTGACTGCATGAAGGCCGAATGCT...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR GCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTTCTTTCCTATCCCATTaGCTAAAGACTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPSFLSH*LKTGKA
Trigger: TGCCTTTCCAGTCTTTAGGCAATGGGATAGGAAAGA...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAGATGGCACTTACCGTaGAGAAAGTGTACATTCTCT +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGRWHLP*RKCTFS
Trigger: AGAGAATGTACACTTTCTGCACGGTAAGTGCCATCT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTAGAGAATTCCTTAAGTaGTGCCCTTCAGAGTTTACA +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFREFLK*CPSEFT
Trigger: TGTAAACTCTGAAGGGCAGCACTTAAGGAATTCTCT...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTaGAGGAGGGTTACAACTCTT +
Preference number: 4 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHPKIRN*RRVTTL
Trigger: AAGAGTTGTAACCCTCCTGCAGTTCCTTATCTTGGG...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGATAAATGTTCAGCATaGGGAGCAAAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKDKCSA*GAKYQT
Trigger: TGTTTGATATTTTGCTCCCCATGCTGAACATTTATC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCAGACTTAATCATATGTaGCACAGTGACTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: RNESELPEKVHTEPSLSLRLNHM*HSDFGI
Trigger: AATTCCAAAGTCACTGTGCCACATATGATTAAGTCT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGTACTGTGCGACCTTTaGCTGATGATCTATTCTGTA +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLVLCDL*LMIYSV
Trigger: TACAGAATAGATCATCAGCCAAAGGTCGCACAGTAC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCCTGCAGTACTATGAGTaGGGAAAGAAAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: YRAESVHSLPLWCITNASLQYYE*GKKTNK
Trigger: TTTGTTTGTTTTCTTTCCCCACTCATAGTACTGCAG...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTGGCTGCAGTGTCTCTaGAACATTTGGGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASWLQCL*NIWVKE
Trigger: TTCTTTGACCCAAATGTTCCAGAGACACTGCAGCCA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCATTTTAAGTCACCAATaGCCGCTGAGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: TPESGVILKQKCERLVSGILSHQ*PLRNDT
Trigger: TGTGTCATTTCTCAGCGGCCATTGGTGACTTAAAAT...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTCAACGGAAGGTACTTaGATAAGAGAACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSSTEGT*IREPWR
Trigger: CCGCCAAGGTTCTCTTATTCAAGTACCTTCCGTTGA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCGGTTACTCATGTCATTaGAGTGTTGGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASGYSCH*SVGWFS
Trigger: TGAAAACCAGCCAACACTTCAATGACATGAGTAACC...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTTGGAGAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATGGTTACTCATGTCATTaGAGTGTTGGCTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FGEIDKAFLSKVWCSFFNGYSCH*SVGWFS
Trigger: TGAAAACCAGCCAACACTTCAATGACATGAGTAACC...ATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGGTATGAGAGCCACTTaGAAATATTGCAATGGCCGT +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHGMRAT*KYCNGR
Trigger: ACGGCCATTGCAATATTTTCAAGTGGCTCTCATACC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTCTCAATCAAAATGTCTaGATAACTGGCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFLNQNV*ITGLVN
Trigger: ATTCACCAAGCCAGTTATGCAGACATTTTGATTGAG...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTCGCTGACTTCATCGTaGATTACTCTGGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHSLTSS*ITLDSS
Trigger: GGAACTATCCAGAGTAATGCACGATGAAGTCAGCGA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAGCATTCGGCCTTCATaGAGTCAGTCATTTGAATTA +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGSIRPS*SQSFEL
Trigger: TAATTCAAATGACTGACTGCATGAAGGCCGAATGCT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTGGACACGAACGATATaGTTCTCAAACTCACACACA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASWTRTI*FSNSHT
Trigger: TGTGTGTGAGTTTGAGAAGCATATCGTTCGTGTCCA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACAGCTAAAATTAAAGTaGGCCAGTTTGCTATCCTTG +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGQLKLK*ASLLSL
Trigger: CAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCGATAAATGTTCAGCATaGGGAGCAAAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: RPSSVKFGVPSSINARSVDKCSA*GAKYQT
Trigger: TGTTTGATATTTTGCTCCCCATGCTGAACATTTATC...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATTGTTTTGCTTACAATTaGCGAGAACTTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHCFAYN*RELAGC
Trigger: ACAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACA...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCCCTCACAGGCTGGATTaGCTTCATACTGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASPHRLD*LHTVLR
Trigger: TCTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGG...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGCCTCACAGGCTGGATTaGCTTCATACTGTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKPHRLD*LHTVLR
Trigger: TCTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGG...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTCTTCAGCCTGTAGATaGCACTTCTGTTTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSSSACR*HFCLRP
Trigger: CGGCCTTAAACAGAAGTGCCATCTACAGGCTGAAGA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTAGCTGGGTTTCTCTCTaGAGACAGAATTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSSWVSL*RQNSSL
Trigger: CAGACTGGAATTCTGTCTCCAGAGAGAAACCCAGCT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGACTAACCCTTGCATTTaGTTTTGTAATGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALTVQKVYILYLYGALPMTNPCI*FCNVRA
Trigger: AGCTCTTACATTACAAAACCAAATGCAAGGGTTAGT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTAAACTAGTATGTGTGTaGTCCTCTCACAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLKLVCV*SSHRFV
Trigger: GACAAATCTGTGAGAGGACCACACACATACTAGTTT...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTGTTTTCAGTGTCGCTaGCTTCATCGTGCATTACTC +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSCFQCR*LHRALL
Trigger: GAGTAATGCACGATGAAGTCAGCGACACTGAAAACA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATTCATATGTGGCACAGTaGCTTTGGAATTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHSYVAQ*LWNSLQ
Trigger: TTGAAGAGAATTCCAAAGTCACTGTGCCACATATGA...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR TCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGGTGTTTGGTGCAACTaGTACATATTATTTCAAACC +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLGVWCN*YILFQT
Trigger: GGTTTGAAATAATATGTATCAGTTGCACCAAACACC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATAGCACTAAGGAAAAGTaGCGACGTTTTACTTCATGC +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHSTKEK*RRFTSC
Trigger: GCATGAAGTAAAACGTCGTCACTTTTCCTTAGTGCT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTTCCTTCTTCAATAAATaGCAGGTCTGTCAAGTACAT +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPSFFNK*QVCQVH
Trigger: ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGA...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAGCAGGACTAACCCTTaGATTTGGTTTTGTAATGTA +
Preference number: 4 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGSRTNP*IWFCNV
Trigger: TACATTACAAAACCAAATGCAAGGGTTAGTCCTGCT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTGTTAATAAGAATGGCTaGAGTGTCTCTGGAACATTT +
Preference number: 4 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPVNKNG*SVSGTF
Trigger: AAATGTTCCAGAGACACTGCAGCCATTCTTATTAAC...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTGAATTCCTTAAGTGCTaGCCTTCAGAGTTTACAGTA +
Preference number: 4 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTEFLKC*PSEFTV
Trigger: TACTGTAAACTCTGAAGGGCAGCACTTAAGGAATTC...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTCGATCATTCTTTCGATaGCAAGGTTTTTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLRSFFR*QGFSLC
Trigger: ACATAAGGAAAAACCTTGCCATCGAAAGAATGATCG...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGTACTGTGCGACCTTTaGCTGATGATCTATTCTGTA +
Preference number: 4 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCVLCDL*LMIYSV
Trigger: TACAGAATAGATCATCAGCCAAAGGTCGCACAGTAC...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAACATTATGGTAGGCAATaGCAACACAAATATCTTCAA +
Preference number: 4 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKHYGRQ*QHKYLQ
Trigger: TTGAAGATATTTGTGTTGCCATTGCCTACCATAATG...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
3UTR CAA 72 bp TTGTTAATAAGAATGGCTGCAGTGTCTCTGGAACATTaGGGTCAAAGAAATGAGTCCGAACTTCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLIRMAAVSLEH*GQRNESELPEK
Trigger: TTTTTCTGGAAGTTCGGACTCATTTCTTTGACCCAAATGTTCCAGAGACACTGCAGCCATTCTTATTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTCTCTACCTCTATGGTaGATTACCAATGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSSLPLW*ITNASS
Trigger: AGAGCTAGCATTGGTAATGCACCATAGAGGTAGAGA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATAACTTCCAGAAAAAGTaGACACAGAACCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHNFQKK*TQNHPF
Trigger: AAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTAATCTTCTTGATGTCTaGATCTTCGTCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTNLLDV*IFVFLV
Trigger: AACCAAGAAGACGAAGATCCAGACATCAAGAAGATT...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTGTTTTGCTTACAATTaGCGAGAACTTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSCFAYN*RELAGC
Trigger: ACAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGCGATCATTCTTTCGATaGCAAGGTTTTTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKRSFFR*QGFSLC
Trigger: ACATAAGGAAAAACCTTGCCATCGAAAGAATGATCG...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTTTCCACGTGTTGTTTaGCCCGAAACTAGTATGTGT +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSFPRVV*PETSMC
Trigger: ACACATACTAGTTTCGGGCCAAACAACACGTGGAAA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 72 bp AGTAATGGGACTTGGTATGAGAGCCACTTGAAAATATaGCAATGGCCGTTTAAAATTCCGTCTTTAAATTCC +
Preference number: 4 (lower is better)
Translates to: SNGTWYESHLKI*QWPFKIPSLNS
Trigger: GGAATTTAAAGACGGAATTTTAAACGGCCATTGCAATATTTTCAAGTGGCTCTCATACCAAGTCCCATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
3UTR CAA 72 bp TTAACAAACAGTAATGGGACTTGGTATGAGAGCCACTaGAAAATATTGCAATGGCCGTTTAAAATTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LTNSNGTWYESH*KILQWPFKIPS
Trigger: AGACGGAATTTTAAACGGCCATTGCAATATTTTCAAGTGGCTCTCATACCAAGTCCCATTACTGTTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR TCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTTTGGGTCAAAGAAATaGGTCCGAACTTCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSFGSKK*VRTSRK
Trigger: TTTTCTGGAAGTTCGGACTCATTTCTTTGACCCAAA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCATCATGCATCAAGATaGGTCAACCTCTTATTTGAA +
Preference number: 4 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHHHASR*VNLLFE
Trigger: TTCAAATAAGAGGTTGACGCATCTTGATGCATGATG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR GCA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTATGTTAATGTCATGCTaGATGGCAGCTGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSMLMSC*MAAEMN
Trigger: ATTCATCTCAGCTGCCATGCAGCATGACATTAACAT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCGATAAATGTTCAGCATaGGGAGCAAAATATCAAACA +
Preference number: 4 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASDKCSA*GAKYQT
Trigger: TGTTTGATATTTTGCTCCCCATGCTGAACATTTATC...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CCA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGAGACTTAATCATATGTaGCACAGTGACTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKRLNHM*HSDFGI
Trigger: AATTCCAAAGTCACTGTGCCACATATGATTAAGTCT...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS GCA 90 bp TGGTGCGGGTGCGGAGGGCTCACGGGTGGCCGCCGGTCTCACCCCTaGCTCGCGGCCATGGCCCAGCTGGCTCCCTCGAGGGCGCGACCG +
Preference number: 5 (lower is better)
Translates to: WCGCGGLTGGRRSHP*LAAMAQLAPSRARP
Trigger: CGGTCGCGCCCTCGAGGGAGCCAGCTGGGCCATGGCCGCGAGGCAGGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS GCA 90 bp GGGCGTGCCCCTCGTTGTAGCGCACGCTCTTCTGCATGGTGCGGGTaGGGAGGGCTCACGGGTGGCCGCCGGTCTCACCCCTGCCTCGCG +
Preference number: 5 (lower is better)
Translates to: GRAPRCSARSSAWCG*GGLTGGRRSHPCLA
Trigger: CGCGAGGCAGGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGCGCTACAACGAGGGGCACGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS CCA 90 bp CCAGGTACAGGGCGTGCCCCTCGTTGTAGCGCACGCTCTTCTGCATaGTGCGGGTGCGGAGGGCTCACGGGTGGCCGCCGGTCTCACCCC +
Preference number: 5 (lower is better)
Translates to: PGTGRAPRCSARSSA*CGCGGLTGGRRSHP
Trigger: GGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGCGCTACAACGAGGGGCACGCCCTGTACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 90 bp AGCGGCTCGCCTCGGCCGTCTTCTTACTCAGGAAGCCGCGCTTGGTaGCCTCCTTGCGCGCCAGAAAGGCCAGGTACAGGGCGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: SGSPRPSSYSGSRAW*PPCAPERPGTGRAP
Trigger: AGGGGCACGCCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAGTAAGAAGACGGCCGAGGCGAGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS CCA 90 bp GGGCCTTGGCCTGGGTATCGTCAGCACTTGGCACTGCCACGGCCGTaGGCCAGGCCGACCGGTCCTCCTTGGAGCTGCAGAGAATGTCCG +
Preference number: 5 (lower is better)
Translates to: GPWPGYRQHLALPRP*ARPTGPPWSCRECP
Trigger: CGGACATTCTCTGCAGCTCCAAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 90 bp CCTCGGCCGTCTTCTTACTCAGGAAGCCGCGCTTGGTGCCCTCCTTaGGCGCCAGAAAGGCCAGGTACAGGGCGTGCCCCTCGTTGTAGC +
Preference number: 5 (lower is better)
Translates to: PRPSSYSGSRAWCPP*APERPGTGRAPRCS
Trigger: GCTACAACGAGGGGCACGCCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAGTAAGAAGACGGCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS GCA 90 bp AAGTTTCTCCTGGGCCTTGGCCTGGGTATCGTCAGCACTTGGCACTaGCACGGCCGTGGGCCAGGCCGACCGGTCCTCCTTGGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KFLLGLGLGIVSTWH*HGRGPGRPVLLGAA
Trigger: TGCAGCTCCAAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 90 bp CAACGCAAGTTTCTCCTGGGCCTTGGCCTGGGTATCGTCAGCACTTaGCACTGCCACGGCCGTGGGCCAGGCCGACCGGTCCTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: QRKFLLGLGLGIVST*HCHGRGPGRPVLLG
Trigger: TCCAAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 90 bp AGGCCGACCGGTCCTCCTTGGAGCTGCAGAGAATGTCCGGGCCGCTaGGGAGGAGCGTCCAGTCAGAATGTAACTGCCTGCCCCACTCGT +
Preference number: 5 (lower is better)
Translates to: RPTGPPWSCRECPGR*GGASSQNVTACPTR
Trigger: ACGAGTGGGGCAGGCAGTTACATTCTGACTGGACGCTCCTCCTCAGCGGCCCGGACATTCTCTGCAGCTCCAAGGAGGACCGGTCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 90 bp CTCCAGCCCTCTCTGTGCAGCCATCGAGGCTCCTGCTGGGAAGGATaGGAGGTTCCCACCTCCTCTCAGGCTGTGGGACCCCTAACCTCA +
Preference number: 5 (lower is better)
Translates to: LQPSLCSHRGSCWEG*EVPTSSQAVGPLTS
Trigger: TGAGGTTAGGGGTCCCACAGCCTGAGAGGAGGTGGGAACCTCCCATCCTTCCCAGCAGGAGCCTCGATGGCTGCACAGAGAGGGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514946.1
CDS GCA 90 bp CCCTCGCCTGAAGGTGGCTGCCTGCAATGTCCTGTGGTCCCCACATaGAGTGACACTCAGCTCAGAGCCCCTGGTTCTGGCCATTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSPEGGCLQCPVVPT*SDTQLRAPGSGHWP
Trigger: AGGCCAATGGCCAGAACCAGGGGCTCTGAGCTGAGTGTCACTGCATGTGGGGACCACAGGACATTGCAGGCAGCCACCTTCAGGCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 90 bp GGAGGTGCCGAGGAGTTGAGGGGGATCTGCAAGGTGAAAGTTCTGTaGTGTCCGCTGCAGGGGAGCTTTCCACTCCTGCTCGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: GGAEELRGICKVKVL*CPLQGSFPLLLGPL
Trigger: CAGCGGACCGAGCAGGAGTGGAAAGCTCCCCTGCAGCGGACACCACAGAACTTTCACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 90 bp TGTGAAAGGGCTTTGAGCAACGCAAGTTTCTCCTGGGCCTTGGCCTaGGTATCGTCAGCACTTGGCACTGCCACGGCCGTGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CERALSNASFSWALA*VSSALGTATAVGQA
Trigger: GGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 90 bp CTCTCACAGATACTCCAGCCCTCTCTGTGCAGCCATCGAGGCTCCTaGTGGGAAGGATGGGAGGTTCCCACCTCCTCTCAGGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LSQILQPSLCSHRGS*WEGWEVPTSSQAVG
Trigger: TCCCACAGCCTGAGAGGAGGTGGGAACCTCCCATCCTTCCCAGCAGGAGCCTCGATGGCTGCACAGAGAGGGCTGGAGTATCTGTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514946.1
CDS-3UTR CAA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGCTTGGTGCCCTCCTaGCGCGCCAGAAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSRLVPS*RARKAR
Trigger: CCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCG...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS TCA 90 bp CTTTGCTCTGGAGAAGAGAGGCCTCTGCTGAGATCCAGTGGTATCTaGCCAGTGTGTGGTGGTGGAGACGCAGCGGGACTCTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LCSGEERPLLRSSGI*PVCGGGDAAGLWVV
Trigger: CACCACCCAGAGTCCCGCTGCGTCTCCACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTTCTCCAGAGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCTCAGGAAGCCGCGCTaGGTGCCCTCCTTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGLRKPR*VPSLRA
Trigger: GGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS GCA 90 bp AGGAGTCCAGTGATATGTCCATCCCCTCGCCTGAAGGTGGCTGCCTaGAATGTCCTGTGGTCCCCACATGCAGTGACACTCAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RSPVICPSPRLKVAA*NVLWSPHAVTLSSE
Trigger: CTCTGAGCTGAGTGTCACTGCATGTGGGGACCACAGGACATTGCAGGCAGCCACCTTCAGGCGAGGGGATGGACATATCACTGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS GCA 90 bp TGTCAGGAGTCCAGTGATATGTCCATCCCCTCGCCTGAAGGTGGCTaGCTGCAATGTCCTGTGGTCCCCACATGCAGTGACACTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CQESSDMSIPSPEGG*LQCPVVPTCSDTQL
Trigger: GAGCTGAGTGTCACTGCATGTGGGGACCACAGGACATTGCAGGCAGCCACCTTCAGGCGAGGGGATGGACATATCACTGGACTCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 90 bp CCCACATGCAGTGACACTCAGCTCAGAGCCCCTGGTTCTGGCCATTaGCCTGTAGTCTTCCAAACCACATGGCACCCCAGACTCACAGAC +
Preference number: 5 (lower is better)
Translates to: PTCSDTQLRAPGSGH*PVVFQTTWHPRLTD
Trigger: GTCTGTGAGTCTGGGGTGCCATGTGGTTTGGAAGACTACAGGCCAATGGCCAGAACCAGGGGCTCTGAGCTGAGTGTCACTGCATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 90 bp TCCCCAGTCTTATGTGAAAGGGCTTTGAGCAACGCAAGTTTCTCCTaGGCCTTGGCCTGGGTATCGTCAGCACTTGGCACTGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SPVLCERALSNASFS*ALAWVSSALGTATA
Trigger: GGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS-3UTR CAA 90 bp CCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTGGCGGGGAAGAGAATTaGCGACACAGACGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: PVDSGARPDLQAGSRGSIGGEEN*RHRRGD
Trigger: ATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCC...AATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGGAGGTGCCGAGGAGTaGAGGGGGATCTGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKAGGAEE*RGICKV
Trigger: CACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCACGCTTGGTGCCCTCCTaGCGCGCCAGAAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NLSSDAPKAHFANTTASARLVPS*RARKAR
Trigger: CCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCG...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAGCCGACCGGTCCTCCTaGGAGCTGCAGAGAATGTCC +
Preference number: 5 (lower is better)
Translates to: AHFANTTASALPKRGKCPADRSS*ELQRMS
Trigger: GGACATTCTCTGCAGCTCCAAGGAGGACCGGTCGGC...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS GCA 90 bp GGGAAGATGTTCTGGACACAGCCAGTGGTGGCGGGGAAGAGAATTTaGGACACAGACGTGGGGATTTGCCATCCACCAAATGTTCACCTC +
Preference number: 5 (lower is better)
Translates to: GKMFWTQPVVAGKRI*DTDVGICHPPNVHL
Trigger: GAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCCACCACTGGCTGTGTCCAGAACATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 90 bp GGACACAGCCAGTGGTGGCGGGGAAGAGAATTTGCGACACAGACGTaGGGATTTGCCATCCACCAAATGTTCACCTCTGTTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GHSQWWRGREFATQT*GFAIHQMFTSVVLA
Trigger: AGCCAGAACAACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCCACCACTGGCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACCGCTTCGCCCAAAGTaGCGGGAGCCGAGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGPLRPK*REPSPR
Trigger: GCGGGGGCTCGGCTCCCGCAACTTTGGGCGAAGCGG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGACATGTTCTCTCGGTGTaGTTAAAGCCTGGTGGACTC +
Preference number: 5 (lower is better)
Translates to: HEHPVDSGARPDLQAGSRHVLSV*LKPGGL
Trigger: GAGTCCACCAGGCTTTAACAACACCGAGAGAACATG...TCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAAATCCTGTGCGTGCTTaGAGACCCAGTGACGGAGGA +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKANPVRA*RPSDGG
Trigger: TCCTCCGTCACTGGGTCTCAAAGCACGCACAGGATT...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GCACACTTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCAGGCACTGTCAGGCTGTaGCTTCTCCACAGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: AHFANTTASALPKRGKCPGTVRL*LLHSFR
Trigger: CCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCC...TGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAAGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCATGGGACTGCTGGAAGTaGTCAGGTCCAATGCTCCTA +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKAWDCWK*SGPMLL
Trigger: TAGGAGCATTGGACCTGACAACTTCCAGCAGTCCCA...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGACAGAGCAGTGGGCATaGTCCGCCGTCTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMTEQWA*SAVCPP
Trigger: TGGAGGACAGACGGCGGACAATGCCCACTGCTCTGT...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGGCGGCTTTCCTTTCTaGGGGAAGAAGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WTQGQGQIFKQGVEVQFLGGFPF*GKKVWV
Trigger: GACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGCC...TAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS TCA 90 bp TGTTTTCACTTCGGACATGGTCCCCAGTCTTATGTGAAAGGGCTTTaGGCAACGCAAGTTTCTCCTGGGCCTTGGCCTGGGTATCGTCAG +
Preference number: 5 (lower is better)
Translates to: CFHFGHGPQSYVKGL*ATQVSPGPWPGYRQ
Trigger: CTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAGTGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 90 bp CAACAGACAGCTGTTTTCACTTCGGACATGGTCCCCAGTCTTATGTaGAAGGGCTTTGAGCAACGCAAGTTTCTCCTGGGCCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: QQTAVFTSDMVPSLM*KGFEQRKFLLGLGL
Trigger: CAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAGTGAAAACAGCTGTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 90 bp GGGAATGCTTCTGAAAATGACATGGTCCAGGAGGGTGATCTGTTCTaGCAGCTCCATGGCCGACAAGGACTCAAAGCATTCGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: GNASENDMVQEGDLF*QLHGRQGLKAFGLH
Trigger: ATGAAGGCCGAATGCTTTGAGTCCTTGTCGGCCATGGAGCTGGCAGAACAGATCACCCTCCTGGACCATGTCATTTTCAGAAGCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 90 bp CTGAGGAGGAGCGTCCAGTCAGAATGTAACTGCCTGCCCCACTCGTaGTTTACTATGATTGTGTTGCTGTTTTTCATGGTCCCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: LRRSVQSECNCLPHS*FTMIVLLFFMVPWR
Trigger: CCGCCAAGGGACCATGAAAAACAGCAACACAATCATAGTAAAGCACGAGTGGGGCAGGCAGTTACATTCTGACTGGACGCTCCTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 90 bp ATGCTCCTATCTTTGAGTTCAAGGGAGAAGTCAAAGACAGCTTTCTaGCCCTCACTGGGGAAGATGTTCTGGACACAGCCAGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: MLLSLSSREKSKTAF*PSLGKMFWTQPVVA
Trigger: CGCCACCACTGGCTGTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGACTTCTCCCTTGAACTCAAAGATAGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 90 bp AAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTT +
Preference number: 5 (lower is better)
Translates to: KAYTILSVLLSMNIP*TQGQGQIFKQGVEV
Trigger: AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAAAGCAGGACAGACAGAATTGTGTATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTCGCTTGGTGCCCTCCTaGCGCGCCAGAAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLRLVPS*RARKAR
Trigger: CCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCG...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTTTAAAGTGGGCCAGTTaGCTATCCTTGCCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: NIPWTQGQGQIFKQGVEVLKWAS*LSLPLV
Trigger: GACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAA...AACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTAGGTTACTCATGTCATaGAAGTGTTGGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: EHPVDSGARPDLQAGSRGRLLMS*KCWLVF
Trigger: GAAAACCAGCCAACACTTCAATGACATGAGTAACCT...ACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGGAACCCTCCTTGGGTaGAGTGCTACACTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGGTLLG*SATLLA
Trigger: AGCCAACAGTGTAGCACTCAACCCAAGGAGGGTTCC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTAGTTTCTCCTGGGCCTaGGCCTGGGTATCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RHCQAVASPQFPAQISSTSFSWA*AWVSSA
Trigger: TGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACT...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS TCA 90 bp CCGGAGAAAGCCATTGACCAGGATGTAGAGCTGGTGAACGTACTCTaGCTCTGCCTCCACCATGGTGAACACAATCTGGTTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PEKAIDQDVELVNVL*LCLHHGEHNLVSLP
Trigger: AGGAAGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAGCTCTACATCCTGGTCAATGGCTTTCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1
CDS-3UTR CAA 90 bp ACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTTTAGTGGTCTGCATAACTGGCTaGGTGAATGGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: TQGQGQIFKQGVEVQFLVVCITG*VNGLHP
Trigger: TGGATGGAGGCCATTCACCAAGCCAGTTATGCAGAC...CACTAAAAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGCACAGACGTGGGGATTaGCCATCCACCAAATGTTCA +
Preference number: 5 (lower is better)
Translates to: LCDLWLMIYSVGSLLELAHRRGD*PSTKCS
Trigger: TGAACATTTGGTGGATGGCAAATCCCCACGTCTGTG...CGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGGGAGGTGCCGAGGAGTaGAGGGGGATCTGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: LTRPSSVKFGVPSSINARGGAEE*RGICKV
Trigger: CACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCC...CCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAGTCTGCTTAGAGACCTaGGCCCAGGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVVCLET*AQVFFS
Trigger: GCTGAAGAAAACCTGGGCCAAGGTCTCTAAGCAGAC...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCCTCTCTCTTGCCCTCTaGCAGCTCCAGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: YRAESVHSLPLWCITNASLSLAL*QLQEGC
Trigger: GCAGCCTTCCTGGAGCTGCAAGAGGGCAAGAGAGAG...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCCTAAGGTTTTCCAGTaGGAGACTGGGCCTAGGACT +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGPKVFQ*ETGPRT
Trigger: AGTCCTAGGCCCAGTCTCCAACTGGAAAACCTTAGG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTACGGATCTGGGGCACTTaGCAGGAGTTGAGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVRIWGT*QELSVL
Trigger: TAAAACACTCAACTCCTGCAAAGTGCCCCAGATCCG...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACCAATGCTCCTATCTTaGAGTTCAAGGGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKAPMLLS*SSREKS
Trigger: TGACTTCTCCCTTGAACTCAAAGATAGGAGCATTGG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGTACCGTTCCCGGGCTTaGCTCTGGAGAAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLYRSRA*LWRREA
Trigger: GGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGTA...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp ATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTGACAGAGCAGTGGGCATaGTCCGCCGTCTGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: IFIYDKVFVKQVLCDLWLTEQWA*SAVCPP
Trigger: TGGAGGACAGACGGCGGACAATGCCCACTGCTCTGT...CAGCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTCATGTTCTCTCGGTGTaGTTAAAGCCTGGTGGACTC +
Preference number: 5 (lower is better)
Translates to: GLHNGLEADAAGNACFVCHVLSV*LKPGGL
Trigger: GAGTCCACCAGGCTTTAACAACACCGAGAGAACATG...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTTCTATGATAAGGTCTTaGTCAAGCAAGTACTGTGCG +
Preference number: 5 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSSMIRS*SSKYCA
Trigger: CGCACAGTACTTGCTTGACAAAGACCTTATCATAGA...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGCACCTTTCCACGTGTaGTTTGGCCCGAAACTAGTA +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGAPFHV*FGPKLV
Trigger: TACTAGTTTCGGGCCAAACAACACGTGGAAAGGTGC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCCTGGGAATGCATGCTTaGTGTGTAGGCAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGLGMHA*CVGRRG
Trigger: TCCTCTTCTGCCTACACACAAAGCATGCATTCCCAG...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TATCTTCAACTCTTCAAAAGCTTAATTTATCGAGTGATGCCCCCAAAGCACACTGGGTATCGTCAGCACTaGGCACTGCCACGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: YLQLFKSLIYRVMPPKHTGYRQH*ALPRPW
Trigger: CCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCC...AGTGTGCTTTGGGGGCATCACTCGATAAATTAAGCTTTTGAAGAGTTGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS TCA 90 bp GGATGTAGAGCTGGTGAACGTACTCTGACTCTGCCTCCACCATGGTaGACACAATCTGGTTTCTCTTCCTCATACTTTCAGCATGAGGAG +
Preference number: 5 (lower is better)
Translates to: GCRAGERTLTLPPPW*TQSGFSSSYFQHEE
Trigger: CTCCTCATGCTGAAAGTATGAGGAAGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAGCTCTACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1
CDS TCA 90 bp AGCTGTTTACTTCCTTTTGCTCCCTATGAGCCTGCCTATTCTCCCTaGGAGCAAGAACCATGGTCGTATTCCTGGTACCTGCACAATACC +
Preference number: 5 (lower is better)
Translates to: SCLLPFAPYEPAYSP*EQEPWSYSWYLHNT
Trigger: GGTATTGTGCAGGTACCAGGAATACGACCATGGTTCTTGCTCTCAGGGAGAATAGGCAGGCTCATAGGGAGCAAAAGGAAGTAAACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512186.1
CDS CCA 90 bp TCTTGTGAAAGGGCCCTGAGGATATTCGCGGCGGCTTTCCTTTCTTaGGGAAGAAGGTCTGGGTCTCGCAAAACTTCTTCTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: SCERALRIFAAAFLS*GRRSGSRKTSSSKF
Trigger: AAATTTGCTAGAAGAAGTTTTGCGAGACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGCCGCGAATATCCTCAGGGCCCTTTCACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCCATGAACATCCCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTTTCGATTTCTGTGTCTaGATCTTCAAGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: FHEHPVDSGARPDLQAGSFDFCV*IFKLMS
Trigger: CGACATCAACTTGAAGATCAAGACACAGAAATCGAA...ACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGGTCTTCTTGGTTGCTTaGGTAAGGTCGCATTCGTTC +
Preference number: 5 (lower is better)
Translates to: FANTTASALPKRGKCPSEVFLVA*VRSHSF
Trigger: GAACGAATGCGACCTTACCAAAGCAACCAAGAAGAC...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp TTCGCAAACACGACAGCTTCTGCATTACCAAAGCGTGGCAAGTGTCCATCAGAGACAATTGGCGAGAACTaGCAGGCTGTACTGGTGATT +
Preference number: 5 (lower is better)
Translates to: FANTTASALPKRGKCPSETIGEN*QAVLVI
Trigger: AATCACCAGTACAGCCTGCAAGTTCTCGCCAATTGT...CTCTGATGGACACTTGCCACGCTTTGGTAATGCAGAAGCTGTCGTGTTTGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCACGTTCAGAACTCGATaGGTAGCCGTTCTCCGTATA +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGTFRTR*VAVLRI
Trigger: TATACGGAGAACGGCTACCAATCGAGTTCTGAACGT...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCCATTTCTCGATGGCGTaGGCACGGGAGCTGACATCA +
Preference number: 5 (lower is better)
Translates to: RPSSVKFGVPSSINARSVHFSMA*ARELTS
Trigger: TGATGTCAGCTCCCGTGCCAACGCCATCGAGAAATG...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCACTTTTTCATGGATCCTaGTCCCTGAGTTCTAACAGA +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKALFHGS*SLSSNR
Trigger: TCTGTTAGAACTCAGGGACAAGGATCCATGAAAAAG...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTGTTTTTCATGGTCCCTaGGCGGATGAACGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: RHCQAVASPQFPAQISSTVFHGP*ADERLA
Trigger: AGCCAAACGTTCATCCGCCAAGGGACCATGAAAAAC...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp ACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGAAGGACTCTGGCGTCTTGATCTTCAAGTaGATGTCGGAGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: TSRKSAHRTIPFPLKDSGVLIFK*MSELVS
Trigger: GCTAACCAACTCCGACATCAACTTGAAGATCAAGAC...GCCAGAGTCCTTCAGAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCATGGATCTTCGTCTTCTaGGTTGCTTTGGTAAGGTCG +
Preference number: 5 (lower is better)
Translates to: NLSSDAPKAHFANTTASAWIFVF*VALVRS
Trigger: CGACCTTACCAAAGCAACCAAGAAGACGAAGATCCA...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCTCAACGGAAGGTACTaGAATAAGAGAACCTTGGCG +
Preference number: 5 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMLNGRY*NKRTLA
Trigger: CGCCAAGGTTCTCTTATTCAAGTACCTTCCGTTGAG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCAGGTGCCCAAACACTaGCCCAGAACCTTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: ALTVQKVYILYLYGALPMQVPKH*PRTFRV
Trigger: GACTCTAAAGGTTCTGGGCAAGTGTTTGGGCACCTG...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTCTTTGGTGGAGAAAGGAGCCTGGCTTCGTGCTGTACCGTGATAGGCAAGGCAGTGTGCAGAAAGGTGTaGAGGAAATCAATACTAAGA +
Preference number: 5 (lower is better)
Translates to: FFGGERSLASCCTVIGKAVCRKV*RKSILR
Trigger: TCTTAGTATTGATTTCCTCAACACCTTTCTGCACAC...TGCCTTGCCTATCACGGTACAGCACGAAGCCAGGCTCCTTTCTCCACCAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGATACTTCGTTTTAGCTaGTTACACAGATCCACGCGT +
Preference number: 5 (lower is better)
Translates to: LCDLWLMIYSVGSLLELAILRFS*LHRSTR
Trigger: ACGCGTGGATCTGTGTAACAAGCTAAAACGAAGTAT...CGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGAATCCTGTGCGTGCTTaGAGACCCAGTGACGGAGGA +
Preference number: 5 (lower is better)
Translates to: RIFIYDKVFVKQVLCDLWNPVRA*RPSDGG
Trigger: TCCTCCGTCACTGGGTCTCAAAGCACGCACAGGATT...CCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CCGTGGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGAGTCGAGGTTCAATTTGATATCATTCTCATTTaGGAGAAATTGACAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PWTQGQGQIFKQGVEVQFDIILI*EKLTRP
Trigger: AGGCCTTGTCAATTTCTCCAAAATGAGAATGATATC...AAATTGAACCTCGACTCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GGTCTCCATAATGGACTAGAGGCAGATGCAGCTGGGAATGCATGCTTTGTGTGTAGTACTGTGCGACCTTaGGCTGATGATCTATTCTGT +
Preference number: 5 (lower is better)
Translates to: GLHNGLEADAAGNACFVCSTVRP*ADDLFC
Trigger: ACAGAATAGATCATCAGCCAAAGGTCGCACAGTACT...ACACACAAAGCATGCATTCCCAGCTGCATCTGCCTCTAGTCCATTATGGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGCTGAAGCATCTGTCTTaGACCCAAACAGCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMLKHLS*TQTAGF
Trigger: AAACCCAGCTGTTTGGGTCAAAGACAGATGCTTCAG...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAGAGCTGTTCGGTGGTaGGGCCCATTTCCCATGCAC +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGRAVRW*GPFPMH
Trigger: GTGCATGGGAAATGGGCCCAACCACCGAACAGCTCT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTATTGTCTCAAATCAATaGCCTGGGGCATTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RHCQAVASPQFPAQISSTIVSNQ*PGAFSP
Trigger: AGGGGAGAATGCCCCAGGCAATTGATTTGAGACAAT...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTGTCTGCATAACTGGCTaGGTGAATGGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFVCITG*VNGLHP
Trigger: TGGATGGAGGCCATTCACCAAGCCAGTTATGCAGAC...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTTTAAAGTGGGCCAGTTaGCTATCCTTGCCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: RHCQAVASPQFPAQISSTLKWAS*LSLPLV
Trigger: GACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAA...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGACAATTGGCGAGAACTaGCAGGCTGTACTGGTGATT +
Preference number: 5 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLTIGEN*QAVLVI
Trigger: AATCACCAGTACAGCCTGCAAGTTCTCGCCAATTGT...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGCTGTTTTGCTTACAATaGGCGAGAACTTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKLFCLQ*ARTCRL
Trigger: CAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACAG...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCCCCTCACAGGCTGGATaGGCTTCATACTGTTTTAAG +
Preference number: 5 (lower is better)
Translates to: RNESELPEKVHTEPSLSLPSQAG*ASYCFK
Trigger: CTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGGG...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCTTGGCGGATGAACGTTaGGCTGGTGTCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGLADER*AGVQQD
Trigger: ATCTTGCTGGACACCAGCCAAACGTTCATCCGCCAA...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTTTGGCGGATGAACGTTaGGCTGGTGTCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFLADER*AGVQQD
Trigger: ATCTTGCTGGACACCAGCCAAACGTTCATCCGCCAA...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAGGTGCCCAAACACTaGCCCAGAACCTTTAGAGTC +
Preference number: 5 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCQVPKH*PRTFRV
Trigger: GACTCTAAAGGTTCTGGGCAAGTGTTTGGGCACCTG...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTACCGTTCCCGGGCTTaGCTCTGGAGAAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHYRSRA*LWRREA
Trigger: GGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGTA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGACGTTCAGAACTCGATaGGTAGCCGTTCTCCGTATA +
Preference number: 5 (lower is better)
Translates to: KQVLCDLWLMIYSVGSLLTFRTR*VAVLRI
Trigger: TATACGGAGAACGGCTACCAATCGAGTTCTGAACGT...CAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTCATTTCTCGATGGCGTaGGCACGGGAGCTGACATCA +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLHFSMA*ARELTS
Trigger: TGATGTCAGCTCCCGTGCCAACGCCATCGAGAAATG...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATGGGCGTGCACCTTTTaGCAGCTGCCTCTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGWACTF*QLPLQK
Trigger: CTTTTGGAGAGGCAGCTGCAAAAAGGTGCACGCCCA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGATTCCCCACAGCACTaGGTGGCCTTCTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLDSPQH*VAFCST
Trigger: TGTGGAACAGAAGGCCACCAAGTGCTGTGGGGAATC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TGCTGTACCGTGATAGGCAAGGCATACACAATTCTGTCTGTCCTGCTTTCCATGGTGTCTCTGGAACATTaGGGTCAAAGAAATGAGTCC +
Preference number: 5 (lower is better)
Translates to: CCTVIGKAYTILSVLLSMVSLEH*GQRNES
Trigger: GGACTCATTTCTTTGACCCAAATGTTCCAGAGACAC...CATGGAAAGCAGGACAGACAGAATTGTGTATGCCTTGCCTATCACGGTACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS GCA 90 bp ATGATTTGGGAAATGCTGGATTATAGCCATACACACAGGAAGCTCTaGCTACAAAGGTGGTCCAATGAGATCCTCAGGAAACACCCACTT +
Preference number: 5 (lower is better)
Translates to: MIWEMLDYSHTHRKL*LQRWSNEILRKHPL
Trigger: AAGTGGGTGTTTCCTGAGGATCTCATTGGACCACCTTTGTAGGCAGAGCTTCCTGTGTGTATGGCTATAATCCAGCATTTCCCAAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 90 bp ATGCTGGATTATAGCCATACACACAGGAAGCTCTGCCTACAAAGGTaGTCCAATGAGATCCTCAGGAAACACCCACTTTTTATGCACACT +
Preference number: 5 (lower is better)
Translates to: MLDYSHTHRKLCLQR*SNEILRKHPLFMHT
Trigger: AGTGTGCATAAAAAGTGGGTGTTTCCTGAGGATCTCATTGGACCACCTTTGTAGGCAGAGCTTCCTGTGTGTATGGCTATAATCCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 90 bp TTCATCTGGCAACGGGAGTTACCAGTTGAATCAAATTATATCGTGTaGGGCGGATCCGGAAGTGCTGATGAAAAATGGGAACAACAGACA +
Preference number: 5 (lower is better)
Translates to: FIWQRELPVESNYIV*GGSGSADEKWEQQT
Trigger: TGTCTGTTGTTCCCATTTTTCATCAGCACTTCCGGATCCGCCCCACACGATATAATTTGATTCAACTGGTAACTCCCGTTGCCAGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAGTCTGCATAACTGGCTaGGTGAATGGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGVCITG*VNGLHP
Trigger: TGGATGGAGGCCATTCACCAAGCCAGTTATGCAGAC...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGCCAGTTTGCTATCCTaGCCTTTAGTCCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKASLLS*PLVLDE
Trigger: TTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCCCCTCACAGGCTGGATaGGCTTCATACTGTTTTAAG +
Preference number: 5 (lower is better)
Translates to: RPSSVKFGVPSSINARSVPSQAG*ASYCFK
Trigger: CTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGGG...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGCCCTCACAGGCTGGATaGGCTTCATACTGTTTTAAG +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKPSQAG*ASYCFK
Trigger: CTTAAAACAGTATGAAGCCAATCCAGCCTGTGAGGG...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTTGGCGGATGAACGTTaGGCTGGTGTCCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLLADER*AGVQQD
Trigger: ATCTTGCTGGACACCAGCCAAACGTTCATCCGCCAA...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAGTGTGCAGAAAGGTGTaGAGGAAATCAATACTAAGA +
Preference number: 5 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVVCRKV*RKSILR
Trigger: TCTTAGTATTGATTTCCTCAACACCTTTCTGCACAC...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCGAGGTGAAAGGCCTCTaGTATATGTCGGAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: RPSSVKFGVPSSINARSVEVKGL*YMSESF
Trigger: GAAACTCTCCGACATATACAAGAGGCCTTTCACCTC...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGTCTGCTTAGAGACCTaGGCCCAGGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLVCLET*AQVFFS
Trigger: GCTGAAGAAAACCTGGGCCAAGGTCTCTAAGCAGAC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAAGCAAGTACTGTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTAGTACTGTGCGACCTTaGGCTGATGATCTATTCTGT +
Preference number: 5 (lower is better)
Translates to: QASTVRPLADDLFCRKSASTVRP*ADDLFC
Trigger: ACAGAATAGATCATCAGCCAAAGGTCGCACAGTACT...AGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCACAGTACTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTCTGGTTCCATCTTCTTaGGTGGAGAAAGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPLVPSS*VEKGAW
Trigger: CCAGGCTCCTTTCTCCACCAAAGAAGATGGAACCAG...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTAGGCAGGAAGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPRQEDC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCTTCCTGCCT...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCTGGTATGAGAGCCACTaGAAAATATTGCAATGGCCG +
Preference number: 5 (lower is better)
Translates to: RNESELPEKVHTEPSLSLWYESH*KILQWP
Trigger: CGGCCATTGCAATATTTTCAAGTGGCTCTCATACCA...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGGTCTTGATCTTCAAGTaGATGTCGGAGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKVLIFK*MSELVS
Trigger: GCTAACCAACTCCGACATCAACTTGAAGATCAAGAC...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCGTCTTCTTGGTTGCTTaGGTAAGGTCGCATTCGTTC +
Preference number: 5 (lower is better)
Translates to: TPESGVILKQKCERLVSGVFLVA*VRSHSF
Trigger: GAACGAATGCGACCTTACCAAAGCAACCAAGAAGAC...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GTGCGACCTTTGGCTGATGATCTATTCTGTAGGAAGTCTGCTGGAACTGGCGTAATTACGCACAAATTCTaGATAAATGTTCAGCATGGG +
Preference number: 5 (lower is better)
Translates to: VRPLADDLFCRKSAGTGVITHKF*INVQHG
Trigger: CCCATGCTGAACATTTATCAAGAATTTGTGCGTAAT...TACGCCAGTTCCAGCAGACTTCCTACAGAATAGATCATCAGCCAAAGGTCGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGGCACTGTCAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTGTCAAAATCTCTGTTTaGCTTACAATTGGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: RHCQAVASPQFPAQISSTVKISV*LTIGEN
Trigger: GTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGAC...AGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTGACAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGTCCTCTAGCTTTGATTaGGCAAACTCCAGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: ALTVQKVYILYLYGALPMSSSFD*ANSRLF
Trigger: GAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGGA...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTCCTCTAGCTTTGATTaGGCAAACTCCAGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKSSSFD*ANSRLF
Trigger: GAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGGA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp GTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTGCGACCTTTGGCCTCAACGGAAGGTACTaGAATAAGAGAACCTTGGCG +
Preference number: 5 (lower is better)
Translates to: VSSSMIRSLSSKYCATFGLNGRY*NKRTLA
Trigger: CGCCAAGGTTCTCTTATTCAAGTACCTTCCGTTGAG...GCCAAAGGTCGCACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGACGGATCTGGGGCACTTaGCAGGAGTTGAGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGRIWGT*QELSVL
Trigger: TAAAACACTCAACTCCTGCAAAGTGCCCCAGATCCG...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTCACAGACGTGGGGATTaGCCATCCACCAAATGTTCA +
Preference number: 5 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPHRRGD*PSTKCS
Trigger: TGAACATTTGGTGGATGGCAAATCCCCACGTCTGTG...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGGCGGGGAAGAGAATTaGCGACACAGACGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSGGEEN*RHRRGD
Trigger: ATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AATAAATGCCAGGTCTGTCAAGTACATCCCAAGATAAGGAACTGCAGGAGGGTTCCAATGCTCCTATCTTaGAGTTCAAGGGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: NKCQVCQVHPKIRNCRRVPMLLS*SSREKS
Trigger: TGACTTCTCCCTTGAACTCAAAGATAGGAGCATTGG...AACCCTCCTGCAGTTCCTTATCTTGGGATGTACTTGACAGACCTGGCATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCATACTTCGTTTTAGCTaGTTACACAGATCCACGCGT +
Preference number: 5 (lower is better)
Translates to: RNESELPEKVHTEPSLSLILRFS*LHRSTR
Trigger: ACGCGTGGATCTGTGTAACAAGCTAAAACGAAGTAT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTGGCGGCTTTCCTTTCTaGGGGAAGAAGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSGGFPF*GKKVWV
Trigger: GACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGCC...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGAAATGAGTCCGAACTTCCAGAAAAAGTGCACACAGAACCATCCCTTTCCCTCAGGTTACTCATGTCATaGAAGTGTTGGCTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: RNESELPEKVHTEPSLSLRLLMS*KCWLVF
Trigger: GAAAACCAGCCAACACTTCAATGACATGAGTAACCT...GAGGGAAAGGGATGGTTCTGTGTGCACTTTTTCTGGAAGTTCGGACTCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCTTCTTTCCTATCCCATaGCCTAAAGACTGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: YRAESVHSLPLWCITNASFFPIP*PKDWKG
Trigger: GCCTTTCCAGTCTTTAGGCAATGGGATAGGAAAGAA...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTTATGTGAAAGGGCTTaGAGCAACGCAAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKLCERA*SNASFS
Trigger: GGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTACAAGGGCCTGATGTaGTCAGCATTATATTCCACC +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKYKGLM*SALYST
Trigger: GGTGGAATATAATGCTGACAACATCAGGCCCTTGTA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATGGATCTTCGTCTTCTaGGTTGCTTTGGTAAGGTCG +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGWIFVF*VALVRS
Trigger: CGACCTTACCAAAGCAACCAAGAAGACGAAGATCCA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AATTTATCGAGTGATGCCCCCAAAGCACACTTCGCAAACACGACAGCTTCTGCAATTACGCACAAATTCTaGATAAATGTTCAGCATGGG +
Preference number: 5 (lower is better)
Translates to: NLSSDAPKAHFANTTASAITHKF*INVQHG
Trigger: CCCATGCTGAACATTTATCAAGAATTTGTGCGTAAT...TGCAGAAGCTGTCGTGTTTGCGAAGTGTGCTTTGGGGGCATCACTCGATAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp AAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCCCAAGCTGTTTTGCTTACAATaGGCGAGAACTTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KVWCSFFNKCQVCQVHPKLFCLQ*ARTCRL
Trigger: CAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACAG...CTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CCTTCAGAGTTTACAGTAACCAGGAGAGAGAGGTATACAAGCAAGAGGATGAAAATAGTTCCTCTAGCTTaGATTTGGCAAACTCCAGGC +
Preference number: 5 (lower is better)
Translates to: PSEFTVTRRERYTSKRMKIVPLA*IWQTPG
Trigger: GCCTGGAGTTTGCCAAATCAAAGCTAGAGGAACTAT...TTTCATCCTCTTGCTTGTATACCTCTCTCTCCTGGTTACTGTAAACTCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp TTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTTGAATAAGAGAACCTaGGCGGATGAACGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LTRPSSVKFGVPSSINARLNKRT*ADERLA
Trigger: AGCCAAACGTTCATCCGCCAAGGTTCTCTTATTCAA...CCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAGAGGTGAAAGGCCTCTaGTATATGTCGGAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGEVKGL*YMSESF
Trigger: GAAACTCTCCGACATATACAAGAGGCCTTTCACCTC...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAATGTTCACCTCTGTaGTTCTGGCTGGTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: RPSSVKFGVPSSINARSVKCSPL*FWLVAK
Trigger: TTTTGCTACCAGCCAGAACAACAGAGGTGAACATTT...GACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTACTGTTGGGACTGCTGGAAGTaGTCAGGTCCAATGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SSYSVSSSMIRSLSSKYCWDCWK*SGPMLL
Trigger: TAGGAGCATTGGACCTGACAACTTCCAGCAGTCCCA...ACAGTACTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTCAAATCCTAGAAGATaGGTAGGTGTGCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASSNPRR*VGVPRP
Trigger: TGGCCTGGGCACACCTACCAATCTTCTAGGATTTGA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATCCCAAGGTCTTGATCTTCAAGTaGATGTCGGAGTTGGTTAGC +
Preference number: 5 (lower is better)
Translates to: KVWCSFFNKCQVCQVHPKVLIFK*MSELVS
Trigger: GCTAACCAACTCCGACATCAACTTGAAGATCAAGAC...CTTGGGATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGTTCGATTTCTGTGTCTaGATCTTCAAGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKFDFCV*IFKLMS
Trigger: CGACATCAACTTGAAGATCAAGACACAGAAATCGAA...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp CAGGAGAGAGAGGTATACAAGCAAGAGGATGAAATACACGCACCAGGAGTAAAGGGTCGCATTCGTTCTTaGGTTTTATTAAGAGCAATA +
Preference number: 5 (lower is better)
Translates to: QEREVYKQEDEIHAPGVKGRIRS*VLLRAI
Trigger: TATTGCTCTTAATAAAACCAAAGAACGAATGCGACC...CTTTACTCCTGGTGCGTGTATTTCATCCTCTTGCTTGTATACCTCTCTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp CTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTCAAGTACATGTCTTCTTGGTTGCTTaGGTAAGGTCGCATTCGTTC +
Preference number: 5 (lower is better)
Translates to: LSKVWCSFFNKCQVCQVHVFLVA*VRSHSF
Trigger: GAACGAATGCGACCTTACCAAAGCAACCAAGAAGAC...ATGTACTTGACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGTGGATCTTCGTCTTCTaGGTTGCTTTGGTAAGGTCG +
Preference number: 5 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKWIFVF*VALVRS
Trigger: CGACCTTACCAAAGCAACCAAGAAGACGAAGATCCA...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCGTCAAAATCTCTGTTTaGCTTACAATTGGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: YRAESVHSLPLWCITNASVKISV*LTIGEN
Trigger: GTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGAC...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCTCTATGATAAGGTCTTaGTCAAGCAAGTACTGTGCG +
Preference number: 5 (lower is better)
Translates to: TPESGVILKQKCERLVSGSMIRS*SSKYCA
Trigger: CGCACAGTACTTGCTTGACAAAGACCTTATCATAGA...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTTTCTGTTCCACAGTTTaGTCGGTGAGATGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSFCSTV*SVRWAC
Trigger: GCACGCCCATCTCACCGACAAAACTGTGGAACAGAA...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGAAGACCTTGAGGTGTTaGGTGCAACTGATACATATT +
Preference number: 5 (lower is better)
Translates to: ALTVQKVYILYLYGALPMKTLRC*VQLIHI
Trigger: AATATGTATCAGTTGCACCAAACACCTCAAGGTCTT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGCTAGCTCCAAGATAATTTCGTaGACAGTACAAAATGTGGGC +
Preference number: 5 (lower is better)
Translates to: YRAESVHSLPLWCITNASSKIIS*TVQNVG
Trigger: GCCCACATTTTGTACTGTCAACGAAATTATCTTGGA...GCTAGCATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTGGAGAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATGCCAGTTTGCTATCCTaGCCTTTAGTCCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: FGEIDKAFLSKVWCSFFNASLLS*PLVLDE
Trigger: TTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGC...ATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GCACTTACCGTGCAGAAAGTGTACATTCTCTACCTCTATGGTGCATTACCAATGATTACGCACAAATTCTaGATAAATGTTCAGCATGGG +
Preference number: 5 (lower is better)
Translates to: ALTVQKVYILYLYGALPMITHKF*INVQHG
Trigger: CCCATGCTGAACATTTATCAAGAATTTGTGCGTAAT...CATTGGTAATGCACCATAGAGGTAGAGAATGTACACTTTCTGCACGGTAAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATCTGTTTTGCTTACAATaGGCGAGAACTTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHLFCLQ*ARTCRL
Trigger: CAGCCTGCAAGTTCTCGCCAATTGTAAGCAAAACAG...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCCAGGTCTGTGTCAAAATCTCTGTTTaGCTTACAATTGGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: KAFLSKVWCSFFNKCQVCVKISV*LTIGEN
Trigger: GTTCTCGCCAATTGTAAGCAAAACAGAGATTTTGAC...ACAGACCTGGCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCTCCTCTAGCTTTGATTaGGCAAACTCCAGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: EIDKAFLSKVWCSFFNKCSSSFD*ANSRLF
Trigger: GAAAAGCCTGGAGTTTGCCAAATCAAAGCTAGAGGA...GCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp GAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATAAATGCATAGTTCCTCTAGCTTaGATTTGGCAAACTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EIDKAFLSKVWCSFFNKCIVPLA*IWQTPG
Trigger: GCCTGGAGTTTGCCAAATCAAAGCTAGAGGAACTAT...GCATTTATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCTTGAATAAGAGAACCTaGGCGGATGAACGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASLNKRT*ADERLA
Trigger: AGCCAAACGTTCATCCGCCAAGGTTCTCTTATTCAA...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGAAAATGTTCACCTCTGTaGTTCTGGCTGGTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGKCSPL*FWLVAK
Trigger: TTTTGCTACCAGCCAGAACAACAGAGGTGAACATTT...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCACCGATTTACCTGCTTaGTTAAAATGGCAACTAGCA +
Preference number: 5 (lower is better)
Translates to: TPESGVILKQKCERLVSGTDLPA*LKWQLA
Trigger: TGCTAGTTGCCATTTTAACAAAGCAGGTAAATCGGT...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTTCTTCTGCAAGACCTaGAGGTGTTTGGTGCAACTG +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHFFCKT*RCLVQL
Trigger: CAGTTGCACCAAACACCTCAAGGTCTTGCAGAAGAA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGATTTGTCCCTGTAGCAAAACTAGATGTCTCAGTTAATAACGAAAAGGCATCCACTATTCACACCGTTTaGCAGATGAGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: RFVPVAKLDVSVNNEKASTIHTV*QMRKLR
Trigger: CCTCAGTTTCCTCATCTGCAAAACGGTGTGAATAGT...GGATGCCTTTTCGTTATTAACTGAGACATCTAGTTTTGCTACAGGGACAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACTCCAGAAAGTGGTGTAATTCTCAAACAAAAATGCGAAAGGCTAGTGAGTGGCCAAATGTCCACAAATTaGCAAAGTAACTGGACACGA +
Preference number: 5 (lower is better)
Translates to: TPESGVILKQKCERLVSGQMSTN*QSNWTR
Trigger: TCGTGTCCAGTTACTTTGCAAATTTGTGGACATTTG...GCCACTCACTAGCCTTTCGCATTTTTGTTTGAGAATTACACCACTTTCTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp CAGGCTGTTGCTTCTCCACAGTTTCCGGCACAAATATCTTCAACTCTTCAAAAGAACGGGAGTTACCAGTaGAATCAAATTATATCGTGT +
Preference number: 5 (lower is better)
Translates to: QAVASPQFPAQISSTLQKNGSYQ*NQIISC
Trigger: ACACGATATAATTTGATTCAACTGGTAACTCCCGTT...CTTTTGAAGAGTTGAAGATATTTGTGCCGGAAACTGTGGAGAAGCAACAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS CCA 90 bp TTAAGAGCAATAATCTGGAACACAAAGTTGGTCCATTTCATGATTTaGGAAATGCTGGATTATAGCCATACACACAGGAAGCTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: LRAIIWNTKLVHFMI*EMLDYSHTHRKLCL
Trigger: TAGGCAGAGCTTCCTGTGTGTATGGCTATAATCCAGCATTTCCCAAATCATGAAATGGACCAACTTTGTGTTCCAGATTATTGCTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS-3UTR CAA 90 bp TACAATAACATGAGAGAAAGGGTGCTGATCCATCATTATTCACTCCACATGGGATTCGATTTCTGTGTCTaGATCTTCAAGTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: YNNMRERVLIHHYSLHMGFDFCV*IFKLMS
Trigger: CGACATCAACTTGAAGATCAAGACACAGAAATCGAA...TCCCATGTGGAGTGAATAATGATGGATCAGCACCCTTTCTCTCATGTTATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATGCCAGTTTGCTATCCTaGCCTTTAGTCCTTGATGAA +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHASLLS*PLVLDE
Trigger: TTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGC...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTTAAAGTGGGCCAGTTaGCTATCCTTGCCTTTAGTC +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHLKWAS*LSLPLV
Trigger: GACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTACAATTGGCGAGAACTaGCAGGCTGTACTGGTGATT +
Preference number: 5 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSTIGEN*QAVLVI
Trigger: AATCACCAGTACAGCCTGCAAGTTCTCGCCAATTGT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATATAGTTCCTCTAGCTTaGATTTGGCAAACTCCAGGC +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHIVPLA*IWQTPG
Trigger: GCCTGGAGTTTGCCAAATCAAAGCTAGAGGAACTAT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTGAAATTGCTTATGTTTaGGTCCATCTCTGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPEIAYV*VHLCRG
Trigger: TCCTCTACAGAGATGGACCAAAACATAAGCAATTTC...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATATCACAAGTTATGCGTaGTTAGGATCCAAACAGCCC +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHITSYA*LGSKQP
Trigger: GGGCTGTTTGGATCCTAACAACGCATAACTTGTGAT...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp ATACTAGACAAGGTAAGGCAGAGAGAATTCCTTAAGTGCTGCCCTTCAGAGTTTTTTACTATGATTGTGTaGCTGTTTTTCATGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ILDKVRQREFLKCCPSEFFTMIV*LFFMVP
Trigger: AGGGACCATGAAAAACAGCAACACAATCATAGTAAA...AAACTCTGAAGGGCAGCACTTAAGGAATTCTCTCTGCCTTACCTTGTCTAGTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000638442.1
CDS-3UTR CAA 90 bp ACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTTCACCTGGTCGCATTCGTTCTTaGGTTTTATTAAGAGCAATA +
Preference number: 5 (lower is better)
Translates to: TFPYVKRATSFLNSHLSPGRIRS*VLLRAI
Trigger: TATTGCTCTTAATAAAACCAAAGAACGAATGCGACC...AGGTGAAAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp AGTGACAGCTCATATAGCGTATCTTCATCTATGATAAGGTCTTTGTCAAGCAAGATCTTTAGTTCATTGTaGAGTTCGAAATCCTGTGCG +
Preference number: 5 (lower is better)
Translates to: SDSSYSVSSSMIRSLSSKIFSSL*SSKSCA
Trigger: CGCACAGGATTTCGAACTCAACAATGAACTAAAGAT...CTTGCTTGACAAAGACCTTATCATAGATGAAGATACGCTATATGAGCTGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp CATCTGACATTCCCTTATGTAAAACGTGCCACCAGCTTTCTAAATAGCCATCTTGATATCATTCTCATTTaGGAGAAATTGACAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HLTFPYVKRATSFLNSHLDIILI*EKLTRP
Trigger: AGGCCTTGTCAATTTCTCCAAAATGAGAATGATATC...AAGATGGCTATTTAGAAAGCTGGTGGCACGTTTTACATAAGGGAATGTCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp TTTGGAGAAATTGACAAGGCCTTCCTCAGTAAAGTTTGGTGTTCCTTCTTCAATGGTCGCATTCGTTCTTaGGTTTTATTAAGAGCAATA +
Preference number: 5 (lower is better)
Translates to: FGEIDKAFLSKVWCSFFNGRIRS*VLLRAI
Trigger: TATTGCTCTTAATAAAACCAAAGAACGAATGCGACC...ATTGAAGAAGGAACACCAAACTTTACTGAGGAAGGCCTTGTCAATTTCTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503795.1
CDS-3UTR CAA 90 bp TTTCACTATATAGTTACATACAGAGATGGCACTTACCGTGCAGAAAGTGTACATTGCTGTAGACTGAAATaGCTTATGTTTTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: FHYIVTYRDGTYRAESVHCCRLK*LMFWSI
Trigger: GATGGACCAAAACATAAGCAATTTCAGTCTACAGCA...ATGTACACTTTCTGCACGGTAAGTGCCATCTCTGTATGTAACTATATAGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS-3UTR CAA 90 bp GACAGTACAAAATGTGGGCATTCATTCGAAAGCATGAAATTGGATTTTTCTTCTATCTTTAGTTCATTGTaGAGTTCGAAATCCTGTGCG +
Preference number: 5 (lower is better)
Translates to: DSTKCGHSFESMKLDFSSIFSSL*SSKSCA
Trigger: CGCACAGGATTTCGAACTCAACAATGAACTAAAGAT...AGAAGAAAAATCCAATTTCATGCTTTCGAATGAATGCCCACATTTTGTACTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS CCA 72 bp CGGGTGGCCGCCGGTCTCACCCCTGCCTCGCGGCCATaGCCCAGCTGGCTCCCTCGAGGGCGCGACCGCTCA +
Preference number: 6 (lower is better)
Translates to: RVAAGLTPASRP*PSWLPRGRDRS
Trigger: TGAGCGGTCGCGCCCTCGAGGGAGCCAGCTGGGCCATGGCCGCGAGGCAGGGGTGAGACCGGCGGCCACCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS CCA 72 bp GTCTCGGACGCCTCCCTGCCCGGCGCCGGCCCTGGGTaGCGCGGGCGTTCGTTCGCAGCTGCAGCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VSDASLPGAGPG*RGRSFAAAALQ
Trigger: CTGGAGGGCTGCAGCTGCGAACGAACGCCCGCGCCACCCAGGGCCGGCGCCGGGCAGGGAGGCGTCCGAGAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS GCA 72 bp TGCGGAGGGCTCACGGGTGGCCGCCGGTCTCACCCCTaGCTCGCGGCCATGGCCCAGCTGGCTCCCTCGAGG +
Preference number: 6 (lower is better)
Translates to: CGGLTGGRRSHP*LAAMAQLAPSR
Trigger: CCTCGAGGGAGCCAGCTGGGCCATGGCCGCGAGGCAGGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS CCA 72 bp GGGCGTGCCCCTCGTTGTAGCGCACGCTCTTCTGCATaGTGCGGGTGCGGAGGGCTCACGGGTGGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: GRAPRCSARSSA*CGCGGLTGGRR
Trigger: CCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGCGCTACAACGAGGGGCACGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 72 bp CCTCGTTGTAGCGCACGCTCTTCTGCATGGTGCGGGTaGGGAGGGCTCACGGGTGGCCGCCGGTCTCACCCC +
Preference number: 6 (lower is better)
Translates to: PRCSARSSAWCG*GGLTGGRRSHP
Trigger: GGGGTGAGACCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGCGCTACAACGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 72 bp CGTGCCCCTCGTTGTAGCGCACGCTCTTCTGCATGGTaGGGGTGCGGAGGGCTCACGGGTGGCCGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: RAPRCSARSSAW*GCGGLTGGRRS
Trigger: AGACCGGCGGCCACCCGTGAGCCCTCCGCACCCGCACCATGCAGAAGAGCGTGCGCTACAACGAGGGGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 72 bp CTGGGCCTTGGCCTGGGTATCGTCAGCACTTGGCACTaGCACGGCCGTGGGCCAGGCCGACCGGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LGLGLGIVSTWH*HGRGPGRPVLL
Trigger: AAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 72 bp CCTGGGTATCGTCAGCACTTGGCACTGCCACGGCCGTaGGCCAGGCCGACCGGTCCTCCTTGGAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PGYRQHLALPRP*ARPTGPPWSCR
Trigger: TCTGCAGCTCCAAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 72 bp TTTCTCCTGGGCCTTGGCCTGGGTATCGTCAGCACTTaGCACTGCCACGGCCGTGGGCCAGGCCGACCGGTC +
Preference number: 6 (lower is better)
Translates to: FLLGLGLGIVST*HCHGRGPGRPV
Trigger: GACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 72 bp GTTTCTCCTGGGCCTTGGCCTGGGTATCGTCAGCACTaGGCACTGCCACGGCCGTGGGCCAGGCCGACCGGT +
Preference number: 6 (lower is better)
Translates to: VSPGPWPGYRQH*ALPRPWARPTG
Trigger: ACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 90 bp GCAACGCAAGTTTCTCCTGGGCCTTGGCCTGGGTATCGTCAGCACTaGGCACTGCCACGGCCGTGGGCCAGGCCGACCGGTCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: ATQVSPGPWPGYRQH*ALPRPWARPTGPPW
Trigger: CCAAGGAGGACCGGTCGGCCTGGCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 72 bp CCTCGGCCGTCTTCTTACTCAGGAAGCCGCGCTTGGTaGCCTCCTTGCGCGCCAGAAAGGCCAGGTACAGGG +
Preference number: 6 (lower is better)
Translates to: PRPSSYSGSRAW*PPCAPERPGTG
Trigger: CCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAGTAAGAAGACGGCCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS CAA 72 bp GTCTTCTTACTCAGGAAGCCGCGCTTGGTGCCCTCCTaGCGCGCCAGAAAGGCCAGGTACAGGGCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: VFLLRKPRLVPS*RARKARYRACP
Trigger: GGGGCACGCCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAGTAAGAAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS GCA 72 bp TCTTCTTACTCAGGAAGCCGCGCTTGGTGCCCTCCTTaGGCGCCAGAAAGGCCAGGTACAGGGCGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: SSYSGSRAWCPP*APERPGTGRAP
Trigger: AGGGGCACGCCCTGTACCTGGCCTTTCTGGCGCGCAAGGAGGGCACCAAGCGCGGCTTCCTGAGTAAGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000638442.1
CDS CAA 90 bp CCGCCGTCTGTCCTCCAGGCTGTCGATAGCGGAGGTGCCGAGGAGTaGAGGGGGATCTGCAAGGTGAAAGTTCTGTGGTGTCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PPSVLQAVDSGGAEE*RGICKVKVLWCPLQ
Trigger: CTGCAGCGGACACCACAGAACTTTCACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCCGCTATCGACAGCCTGGAGGACAGACGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp CAGTGTGTGGTGGTGGAGACGCAGCGGGACTCTGGGTaGTGGTGGTGGGACTGCTGGAAGTTGTCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: QCVVVETQRDSG*WWWDCWKLSGP
Trigger: TGGACCTGACAACTTCCAGCAGTCCCACCACCACCACCCAGAGTCCCGCTGCGTCTCCACCACCACACACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp TCCCCTCGCCTGAAGGTGGCTGCCTGCAATGTCCTGTaGTCCCCACATGCAGTGACACTCAGCTCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: SPRLKVAACNVL*SPHAVTLSSEP
Trigger: GGGCTCTGAGCTGAGTGTCACTGCATGTGGGGACCACAGGACATTGCAGGCAGCCACCTTCAGGCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS GCA 72 bp ATACTCCAGCCCTCTCTGTGCAGCCATCGAGGCTCCTaGTGGGAAGGATGGGAGGTTCCCACCTCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: ILQPSLCSHRGS*WEGWEVPTSSQ
Trigger: CTGAGAGGAGGTGGGAACCTCCCATCCTTCCCAGCAGGAGCCTCGATGGCTGCACAGAGAGGGCTGGAGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514946.1
CDS GCA 72 bp AAGCCTCGCCTCTCACAGATACTCCAGCCCTCTCTGTaGAGCCATCGAGGCTCCTGCTGGGAAGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: KPRLSQILQPSL*SHRGSCWEGWE
Trigger: CTCCCATCCTTCCCAGCAGGAGCCTCGATGGCTGCACAGAGAGGGCTGGAGTATCTGTGAGAGGCGAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514946.1
CDS CCA 72 bp GCCTCTGCTGAGATCCAGTGGTATCTGACCAGTGTGTaGTGGTGGAGACGCAGCGGGACTCTGGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: ASAEIQWYLTSV*WWRRSGTLGGG
Trigger: ACCACCACCCAGAGTCCCGCTGCGTCTCCACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp GCTTTGAGCAACGCAAGTTTCTCCTGGGCCTTGGCCTaGGTATCGTCAGCACTTGGCACTGCCACGGCCGTG +
Preference number: 6 (lower is better)
Translates to: ALSNASFSWALA*VSSALGTATAV
Trigger: CACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 72 bp GGAGAAGAGAGGCCTCTGCTGAGATCCAGTGGTATCTaGCCAGTGTGTGGTGGTGGAGACGCAGCGGGACTC +
Preference number: 6 (lower is better)
Translates to: GEERPLLRSSGI*PVCGGGDAAGL
Trigger: GAGTCCCGCTGCGTCTCCACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS TCA 72 bp TGGCTGCCTGCAATGTCCTGTGGTCCCCACATGCAGTaGCACTCAGCTCAGAGCCCCTGGTTCTGGCCATTG +
Preference number: 6 (lower is better)
Translates to: WLPAMSCGPHMQ*HSAQSPWFWPL
Trigger: CAATGGCCAGAACCAGGGGCTCTGAGCTGAGTGTCACTGCATGTGGGGACCACAGGACATTGCAGGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 72 bp TCTGCTGAGATCCAGTGGTATCTGACCAGTGTGTGGTaGTGGAGACGCAGCGGGACTCTGGGTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SAEIQWYLTSVW*WRRSGTLGGGG
Trigger: ACCACCACCACCCAGAGTCCCGCTGCGTCTCCACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp GTCTTATGTGAAAGGGCTTTGAGCAACGCAAGTTTCTCCTGGGCCTaGGCCTGGGTATCGTCAGCACTTGGCACTGCCACGGCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: VLCERALSNASFSWA*AWVSSALGTATAVG
Trigger: GCCCACGGCCGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 72 bp GTCCTCCAGGCTGTCGATAGCGGAGGTGCCGAGGAGTaGAGGGGGATCTGCAAGGTGAAAGTTCTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: VLQAVDSGGAEE*RGICKVKVLWC
Trigger: ACACCACAGAACTTTCACCTTGCAGATCCCCCTCAACTCCTCGGCACCTCCGCTATCGACAGCCTGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp GAAAGGGCTTTGAGCAACGCAAGTTTCTCCTGGGCCTaGGCCTGGGTATCGTCAGCACTTGGCACTGCCACG +
Preference number: 6 (lower is better)
Translates to: ERALSNASFSWA*AWVSSALGTAT
Trigger: CGTGGCAGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 72 bp TTCCCGGGCTTTGCTCTGGAGAAGAGAGGCCTCTGCTaGGATCCAGTGGTATCTGACCAGTGTGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: FPGFALEKRGLC*DPVVSDQCVVV
Trigger: CACCACCACACACTGGTCAGATACCACTGGATCTCAGCAGAGGCCTCTCTTCTCCAGAGCAAAGCCCGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp CAAGGGAGAAGTCAAAGACAGCTTTCTGGCCCTCACTaGGGAAGATGTTCTGGACACAGCCAGTGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: QGRSQRQLSGPH*GRCSGHSQWWR
Trigger: CCGCCACCACTGGCTGTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGACTTCTCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp GCTATTGCAAAAGCAGAAGCCGGTGAAACAGAGCAGTaGGCATTGTCCGCCGTCTGTCCTCCAGGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: AIAKAEAGETEQ*ALSAVCPPGCR
Trigger: TCGACAGCCTGGAGGACAGACGGCGGACAATGCCCACTGCTCTGTTTCACCGGCTTCTGCTTTTGCAATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS TCA 72 bp CTTTCTCCTGGCGTGAGGGTGCTAACAAGACAACAGTaGAGGCGGCAGCGTCAGGAGGCTCCACCACTATTT +
Preference number: 6 (lower is better)
Translates to: LSPGVRVLTRQQ*RRQRQEAPPLF
Trigger: AAATAGTGGTGGAGCCTCCTGACGCTGCCGCCTTCACTGTTGTCTTGTTAGCACCCTCACGCCAGGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265080.9
ENST00000503795.1
ENST00000512186.1
CDS TCA 72 bp CTGCCACCCATTTCTCGATGGCGTTGGCACGGGAGCTaGCATCAGCATAGTTCATTATCTGGGAGGCCACCA +
Preference number: 6 (lower is better)
Translates to: LPPISRWRWHGS*HQHSSLSGRPP
Trigger: TGGTGGCCTCCCAGATAATGAACTATGCTGATGTCAGCTCCCGTGCCAACGCCATCGAGAAATGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS TCA 72 bp TTCGGACATGGTCCCCAGTCTTATGTGAAAGGGCTTTaGGCAACGCAAGTTTCTCCTGGGCCTTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: FGHGPQSYVKGL*ATQVSPGPWPG
Trigger: CCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 72 bp CTCGGTGTTGTTAAAGCCTGGTGGACTCCCATGTCCTaGTGCAGCTGTGGCTATTGCAAAAGCAGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: LGVVKAWWTPMS*CSCGYCKSRSR
Trigger: CCGGCTTCTGCTTTTGCAATAGCCACAGCTGCAGCAGGACATGGGAGTCCACCAGGCTTTAACAACACCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 72 bp GGGCCGCTGAGGAGGAGCGTCCAGTCAGAATGTAACTaGCTGCCCCACTCGTGCTTTACTATGATTGTGTTG +
Preference number: 6 (lower is better)
Translates to: GPLRRSVQSECN*LPHSCFTMIVL
Trigger: CAACACAATCATAGTAAAGCACGAGTGGGGCAGGCAGTTACATTCTGACTGGACGCTCCTCCTCAGCGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 72 bp GTTCTGGACACAGCCAGTGGTGGCGGGGAAGAGAATTaGCGACACAGACGTGGGGATTTGCCATCCACCAAA +
Preference number: 6 (lower is better)
Translates to: VLDTASGGGEEN*RHRRGDLPSTK
Trigger: TTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCCACCACTGGCTGTGTCCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp CTTCGGACATGGTCCCCAGTCTTATGTGAAAGGGCTTaGAGCAACGCAAGTTTCTCCTGGGCCTTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LRTWSPVLCERA*SNASFSWALAW
Trigger: CCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 90 bp GCCAGTGGTGGCGGGGAAGAGAATTTGCGACACAGACGTGGGGATTaGCCATCCACCAAATGTTCACCTCTGTTGTTCTGGCTGGTAGCA +
Preference number: 6 (lower is better)
Translates to: ASGGGEENLRHRRGD*PSTKCSPLLFWLVA
Trigger: TGCTACCAGCCAGAACAACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCCACCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp ATCCACGCGTGGGTTATCGACATTCTCTTCTACCGTTCCCGGGCTTaGCTCTGGAGAAGAGAGGCCTCTGCTGAGATCCAGTGGTATCTG +
Preference number: 6 (lower is better)
Translates to: IHAWVIDILFYRSRA*LWRREASAEIQWYL
Trigger: CAGATACCACTGGATCTCAGCAGAGGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGTAGAAGAGAATGTCGATAACCCACGCGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp AGGGCCCTGAGGATATTCGCGGCGGCTTTCCTTTCTTaGGGAAGAAGGTCTGGGTCTCGCAAAACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RALRIFAAAFLS*GRRSGSRKTSS
Trigger: AGAAGAAGTTTTGCGAGACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGCCGCGAATATCCTCAGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp TCCAATGACCTGACAGGGATGGAGGTGAAAGGCCTCTaGTATATGTCGGAGAGTTTCCCCAGCACCACAGCG +
Preference number: 6 (lower is better)
Translates to: SNDLTGMEVKGL*YMSESFPSTTA
Trigger: CGCTGTGGTGCTGGGGAAACTCTCCGACATATACAAGAGGCCTTTCACCTCCATCCCTGTCAGGTCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp TGGGTTATCGACATTCTCTTCTACCGTTCCCGGGCTTaGCTCTGGAGAAGAGAGGCCTCTGCTGAGATCCAG +
Preference number: 6 (lower is better)
Translates to: WVIDILFYRSRA*LWRREASAEIQ
Trigger: CTGGATCTCAGCAGAGGCCTCTCTTCTCCAGAGCAAAGCCCGGGAACGGTAGAAGAGAATGTCGATAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp AAGGGCCCTGAGGATATTCGCGGCGGCTTTCCTTTCTaGGGGAAGAAGGTCTGGGTCTCGCAAAACTTCTTC +
Preference number: 6 (lower is better)
Translates to: KGPEDIRGGFPF*GKKVWVSQNFF
Trigger: GAAGAAGTTTTGCGAGACCCAGACCTTCTTCCCCAAGAAAGGAAAGCCGCCGCGAATATCCTCAGGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS GCA 72 bp GCGGGGAAGAGAATTTGCGACACAGACGTGGGGATTTaGCATCCACCAAATGTTCACCTCTGTTGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: AGKRICDTDVGI*HPPNVHLCCSG
Trigger: GCCAGAACAACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp CAGTGGTGGCGGGGAAGAGAATTTGCGACACAGACGTaGGGATTTGCCATCCACCAAATGTTCACCTCTGTT +
Preference number: 6 (lower is better)
Translates to: QWWRGREFATQT*GFAIHQMFTSV
Trigger: AACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCCACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp ACAATTCTGTCTGTCCTGCTTTCCATGAACATCCCGTaGACTCAGGGGCAAGGCCAGATCTTCAAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: TILSVLLSMNIP*TQGQGQIFKQG
Trigger: TCCCTGCTTGAAGATCTGGCCTTGCCCCTGAGTCCACGGGATGTTCATGGAAAGCAGGACAGACAGAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265080.9
CDS CCA 72 bp TTATGTGAAAGGGCTTTGAGCAACGCAAGTTTCTCCTaGGCCTTGGCCTGGGTATCGTCAGCACTTGGCACT +
Preference number: 6 (lower is better)
Translates to: LCERALSNASFS*ALAWVSSALGT
Trigger: AGTGCCAAGTGCTGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 72 bp GGCGGGGAAGAGAATTTGCGACACAGACGTGGGGATTaGCCATCCACCAAATGTTCACCTCTGTTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: GGEENLRHRRGD*PSTKCSPLLFW
Trigger: CCAGAACAACAGAGGTGAACATTTGGTGGATGGCAAATCCCCACGTCTGTGTCGCAAATTCTCTTCCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp CTGTTTTCACTTCGGACATGGTCCCCAGTCTTATGTGAAAGGGCTTaGAGCAACGCAAGTTTCTCCTGGGCCTTGGCCTGGGTATCGTCA +
Preference number: 6 (lower is better)
Translates to: LFSLRTWSPVLCERA*SNASFSWALAWVSS
Trigger: TGACGATACCCAGGCCAAGGCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAGTGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 90 bp TGGTGGTGGGACTGCTGGAAGTTGTCAGGTCCAATGCTCCTATCTTaGAGTTCAAGGGAGAAGTCAAAGACAGCTTTCTGGCCCTCACTG +
Preference number: 6 (lower is better)
Translates to: WWWDCWKLSGPMLLS*SSREKSKTAFWPSL
Trigger: CAGTGAGGGCCAGAAAGCTGTCTTTGACTTCTCCCTTGAACTCAAAGATAGGAGCATTGGACCTGACAACTTCCAGCAGTCCCACCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS TCA 72 bp GCCATTGACCAGGATGTAGAGCTGGTGAACGTACTCTaGCTCTGCCTCCACCATGGTGAACACAATCTGGTT +
Preference number: 6 (lower is better)
Translates to: AIDQDVELVNVL*LCLHHGEHNLV
Trigger: AACCAGATTGTGTTCACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAGCTCTACATCCTGGTCAATGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1
CDS TCA 72 bp GCTGTTTTCACTTCGGACATGGTCCCCAGTCTTATGTaGAAGGGCTTTGAGCAACGCAAGTTTCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AVFTSDMVPSLM*KGFEQRKFLLG
Trigger: GCCCAGGAGAAACTTGCGTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAGTGAAAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 72 bp TCTGAAAATGACATGGTCCAGGAGGGTGATCTGTTCTaGCAGCTCCATGGCCGACAAGGACTCAAAGCATTC +
Preference number: 6 (lower is better)
Translates to: SENDMVQEGDLF*QLHGRQGLKAF
Trigger: GAATGCTTTGAGTCCTTGTCGGCCATGGAGCTGGCAGAACAGATCACCCTCCTGGACCATGTCATTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp AAAAACAATTCCAATGACCTGACAGGGATGGAGGTGAAAGGCCTCTaGTATATGTCGGAGAGTTTCCCCAGCACCACAGCGGCAGTAGTG +
Preference number: 6 (lower is better)
Translates to: KNNSNDLTGMEVKGL*YMSESFPSTTAAVV
Trigger: CACTACTGCCGCTGTGGTGCTGGGGAAACTCTCCGACATATACAAGAGGCCTTTCACCTCCATCCCTGTCAGGTCATTGGAATTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CCA 72 bp TCTTTGAGTTCAAGGGAGAAGTCAAAGACAGCTTTCTaGCCCTCACTGGGGAAGATGTTCTGGACACAGCCA +
Preference number: 6 (lower is better)
Translates to: SLSSREKSKTAF*PSLGKMFWTQP
Trigger: TGGCTGTGTCCAGAACATCTTCCCCAGTGAGGGCCAGAAAGCTGTCTTTGACTTCTCCCTTGAACTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS TCA 72 bp GCTGGTGAACGTACTCTGACTCTGCCTCCACCATGGTaGACACAATCTGGTTTCTCTTCCTCATACTTTCAG +
Preference number: 6 (lower is better)
Translates to: AGERTLTLPPPW*TQSGFSSSYFQ
Trigger: CTGAAAGTATGAGGAAGAGAAACCAGATTGTGTTCACCATGGTGGAGGCAGAGTCAGAGTACGTTCACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1
CDS TCA 72 bp CAGAATGTAACTGCCTGCCCCACTCGTGCTTTACTATaGTTGTGTTGCTGTTTTTCATGGTCCCTTGGCGGA +
Preference number: 6 (lower is better)
Translates to: QNVTACPTRALL*LCCCFSWSLGG
Trigger: TCCGCCAAGGGACCATGAAAAACAGCAACACAATCATAGTAAAGCACGAGTGGGGCAGGCAGTTACATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 72 bp AACTGCCTGCCCCACTCGTGCTTTACTATGATTGTGTaGCTGTTTTTCATGGTCCCTTGGCGGATGAACGTT +
Preference number: 6 (lower is better)
Translates to: NCLPHSCFTMIV*LFFMVPWRMNV
Trigger: AACGTTCATCCGCCAAGGGACCATGAAAAACAGCAACACAATCATAGTAAAGCACGAGTGGGGCAGGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CAA 90 bp CAAGTGTCCATCAGAGACATTTCATCTGGCAACGGGAGTTACCAGTaGAATCAAATTATATCGTGTGGGGCGGATCCGGAAGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: QVSIRDISSGNGSYQ*NQIISCGADPEVLM
Trigger: CATCAGCACTTCCGGATCCGCCCCACACGATATAATTTGATTCAACTGGTAACTCCCGTTGCCAGATGAAATGTCTCTGATGGACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 72 bp TACACACAGGAAGCTCTGCCTACAAAGGTGGTCCAATaGGATCCTCAGGAAACACCCACTTTTTATGCACAC +
Preference number: 6 (lower is better)
Translates to: YTQEALPTKVVQ*DPQETPTFYAH
Trigger: GTGTGCATAAAAAGTGGGTGTTTCCTGAGGATCTCATTGGACCACCTTTGTAGGCAGAGCTTCCTGTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS GCA 72 bp AGCGTCCAGTCAGAATGTAACTGCCTGCCCCACTCGTaGTTTACTATGATTGTGTTGCTGTTTTTCATGGTC +
Preference number: 6 (lower is better)
Translates to: SVQSECNCLPHS*FTMIVLLFFMV
Trigger: GACCATGAAAAACAGCAACACAATCATAGTAAAGCACGAGTGGGGCAGGCAGTTACATTCTGACTGGACGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS CCA 72 bp AATGGGAACAACAGACAGCTGTTTTCACTTCGGACATaGTCCCCAGTCTTATGTGAAAGGGCTTTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: NGNNRQLFSLRT*SPVLCERALSN
Trigger: GTTGCTCAAAGCCCTTTCACATAAGACTGGGGACCATGTCCGAAGTGAAAACAGCTGTCTGTTGTTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS GCA 72 bp GAAATGCTGGATTATAGCCATACACACAGGAAGCTCTaGCTACAAAGGTGGTCCAATGAGATCCTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: EMLDYSHTHRKL*LQRWSNEILRK
Trigger: TTTCCTGAGGATCTCATTGGACCACCTTTGTAGGCAGAGCTTCCTGTGTGTATGGCTATAATCCAGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 72 bp TATAGCCATACACACAGGAAGCTCTGCCTACAAAGGTaGTCCAATGAGATCCTCAGGAAACACCCACTTTTT +
Preference number: 6 (lower is better)
Translates to: YSHTHRKLCLQR*SNEILRKHPLF
Trigger: AAAAAGTGGGTGTTTCCTGAGGATCTCATTGGACCACCTTTGTAGGCAGAGCTTCCTGTGTGTATGGCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CCA 72 bp CAACGGGAGTTACCAGTTGAATCAAATTATATCGTGTaGGGCGGATCCGGAAGTGCTGATGAAAAATGGGAA +
Preference number: 6 (lower is better)
Translates to: QRELPVESNYIV*GGSGSADEKWE
Trigger: TTCCCATTTTTCATCAGCACTTCCGGATCCGCCCCACACGATATAATTTGATTCAACTGGTAACTCCCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502677.1
ENST00000638442.1
CDS TCA 72 bp CTAGCAAATTTAGGACATTCATCTTTAGTTCATTGTTaGGTTCGAAATCCTGTGCGTGCTTTGAGACCCAGT +
Preference number: 6 (lower is better)
Translates to: LANLGHSSLVHC*VRNPVRALRPS
Trigger: ACTGGGTCTCAAAGCACGCACAGGATTTCGAACTCAACAATGAACTAAAGATGAATGTCCTAAATTTGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 72 bp CTTCTTGATGTCTGGATCTTCGTCTTCTTGGTTGCTTaGGTAAGGTCGCATTCGTTCTTTGGTTTTATTAAG +
Preference number: 6 (lower is better)
Translates to: LLDVWIFVFLVA*VRSHSFFGFIK
Trigger: CTTAATAAAACCAAAGAACGAATGCGACCTTACCAAAGCAACCAAGAAGACGAAGATCCAGACATCAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000514946.1
ENST00000638442.1
CDS CAA 72 bp CTTTTTAATCTTCTTGATGTCTGGATCTTCGTCTTCTaGGTTGCTTTGGTAAGGTCGCATTCGTTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: LFNLLDVWIFVF*VALVRSHSFFG
Trigger: ACCAAAGAACGAATGCGACCTTACCAAAGCAACCAAGAAGACGAAGATCCAGACATCAAGAAGATTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000514946.1
ENST00000638442.1
CDS CAA 72 bp TCTAGCAAATTTAGGACATTCATCTTTAGTTCATTGTaGAGTTCGAAATCCTGTGCGTGCTTTGAGACCCAG +
Preference number: 6 (lower is better)
Translates to: SSKFRTFIFSSL*SSKSCACFETQ
Trigger: CTGGGTCTCAAAGCACGCACAGGATTTCGAACTCAACAATGAACTAAAGATGAATGTCCTAAATTTGCTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp GCTCTGAACCTTTTTAATCTTCTTGATGTCTGGATCTTCGTCTTCTaGGTTGCTTTGGTAAGGTCGCATTCGTTCTTTGGTTTTATTAAG +
Preference number: 6 (lower is better)
Translates to: ALNLFNLLDVWIFVF*VALVRSHSFFGFIK
Trigger: CTTAATAAAACCAAAGAACGAATGCGACCTTACCAAAGCAACCAAGAAGACGAAGATCCAGACATCAAGAAGATTAAAAAGGTTCAGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000514946.1
ENST00000638442.1
CDS CAA 72 bp TCTTCTAGCAAATTTAGGACATTCATCTTTAGTTCATaGTTGAGTTCGAAATCCTGTGCGTGCTTTGAGACC +
Preference number: 6 (lower is better)
Translates to: SSSKFRTFIFSS*LSSKSCACFET
Trigger: GGTCTCAAAGCACGCACAGGATTTCGAACTCAACAATGAACTAAAGATGAATGTCCTAAATTTGCTAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265080.9
ENST00000503795.1
CDS CAA 90 bp CTTTTTAATCTTCTTGATGTCTGGATCTTCGTCTTCTTGGTTGCTTaGGTAAGGTCGCATTCGTTCTTTGGTTTTATTAAGAGCAATAAT +
Preference number: 6 (lower is better)
Translates to: LFNLLDVWIFVFLVA*VRSHSFFGFIKSNN
Trigger: ATTATTGCTCTTAATAAAACCAAAGAACGAATGCGACCTTACCAAAGCAACCAAGAAGACGAAGATCCAGACATCAAGAAGATTAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000514946.1
ENST00000638442.1
CDS GCA 72 bp AGAGCTAATGAACGTATGAATAAATCACCACAAGGATaGAAGTCCACAAAAATGGAAGATCCCATATTTTCA +
Preference number: 6 (lower is better)
Translates to: RANERMNKSPQG*KSTKMEDPIFS
Trigger: TGAAAATATGGGATCTTCCATTTTTGTGGACTTGCATCCTTGTGGTGATTTATTCATACGTTCATTAGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512186.1
CDS CCA 72 bp CGCATTCGTTCTTTGGTTTTATTAAGAGCAATAATCTaGAACACAAAGTTGGTCCATTTCATGATTTGGGAA +
Preference number: 6 (lower is better)
Translates to: RIRSLVLLRAII*NTKLVHFMIWE
Trigger: TTCCCAAATCATGAAATGGACCAACTTTGTGTTCCAGATTATTGCTCTTAATAAAACCAAAGAACGAATGCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502677.1
CDS CAA 72 bp GATCAGCTAAAATTAAAGTGGGCCAGTTTGCTATCCTaGCCTTTAGTCCTTGATGAAATATTTCATGAAGAA +
Preference number: 6 (lower is better)
Translates to: DQLKLKWASLLS*PLVLDEIFHEE
Trigger: TTCTTCATGAAATATTTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1
CDS CAA 72 bp TATCAAACAGATCAGCTAAAATTAAAGTGGGCCAGTTaGCTATCCTTGCCTTTAGTCCTTGATGAAATATTT +
Preference number: 6 (lower is better)
Translates to: YQTDQLKLKWAS*LSLPLVLDEIF
Trigger: AAATATTTCATCAAGGACTAAAGGCAAGGATAGCAAACTGGCCCACTTTAATTTTAGCTGATCTGTTTGATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265080.9
ENST00000502677.1
ENST00000503795.1
ENST00000638442.1