RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000058335

Ensembl transcript IDs: ENST00000394745.3, ENST00000419573.7, ENST00000558480.7, ENST00000559926.1, ENST00000560286.1, ENST00000560334.5, ENST00000560943.5, ENST00000561112.1, ENST00000623620.1

Found 966 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGGTCCCAGGGGAGGCGGCCTTGGGAGCTCTGGAGTGGGTTGTaGCTTGCAGTGGGCCCCATGCCTGTGACTGAGGGTGGTGTTCCG +
Preference number: 1 (lower is better)
Translates to: CRSQGRRPWELWSGL*LAVGPMPVTEGGVP
Trigger: CGGAACACCACCCTCAGTCACAGGCATGGGGCCCACTGCAAGGCACAACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTGGGACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 90 bp CCGGACTGTGAGGAGCCCAAGCCACACAGAGAGGCCACGTGTGGATaGTCCCATGAACAGCCCCAGTGCAGCCCAGCAGACATCAACATC +
Preference number: 1 (lower is better)
Translates to: PDCEEPKPHREATCG*SHEQPQCSPADINI
Trigger: GATGTTGATGTCTGCTGGGCTGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGGGCTCCTCACAGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 90 bp AGGACACATCTGGGCAGGATGGCATCTGGGCAGCCTTGTAGCTTCTaGCTGAGGCTGCTGGAACAGTCGCTCTTGGAACCCAGCTTCCGG +
Preference number: 1 (lower is better)
Translates to: RTHLGRMASGQPCSF*LRLLEQSLLEPSFR
Trigger: CCGGAAGCTGGGTTCCAAGAGCGACTGTTCCAGCAGCCTCAGGCAGAAGCTACAAGGCTGCCCAGATGCCATCCTGCCCAGATGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp CCCAGTTATAACAACTACATGGAACATGCTGGGAGGATGCCTGGGTaGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGGGACGGAAGCA +
Preference number: 1 (lower is better)
Translates to: PSYNNYMEHAGRMPG*PPQPRSLGWGGTEA
Trigger: TGCTTCCGTCCCTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAGTTGTTATAACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp TGGGGCCTGAACGAGATGGCAGCATTGGTACGAGGGGTGTGGTTCTaGGCAGAGAGGACTCCCTTCCGTCCAGGTTACTGGGAGACACAT +
Preference number: 1 (lower is better)
Translates to: WGLNEMAALVRGVWF*AERTPFRPGYWETH
Trigger: ATGTGTCTCCCAGTAACCTGGACGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATCTCGTTCAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp CCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGAGTCGACGTaGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCTAGGGCCT +
Preference number: 1 (lower is better)
Translates to: PTFSGCWASGRQEST*LGVCDSISSGSLGP
Trigger: AGGCCCTAGACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 90 bp GGCTGGGGAGGGACGGAAGCAGGACTGGAGTCTAAGATTCTTGTATaGAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGG +
Preference number: 1 (lower is better)
Translates to: GWGGTEAGLESKILV*KGAVSPLRRVRSLG
Trigger: CCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCATACAAGAATCTTAGACTCCAGTCCTGCTTCCGTCCCTCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp ATGCTGGGCCAGTGGTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTaGCTCCATTTCCTCGGGAAGTCTAGGGCCTCATCCAGTTGTATT +
Preference number: 1 (lower is better)
Translates to: MLGQWSARVDVAWCL*LHFLGKSRASSSCI
Trigger: AATACAACTGGATGAGGCCCTAGACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp CTGAGCAGAGAGGACTCCCTTCCGTCCAGGTTACTGGGAGACACATaGGGAGTTTTGAGACCTGCGATTTTGGCTGGAGAAGCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: LSREDSLPSRLLGDT*GVLRPAILAGEAAL
Trigger: CAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAAGGGAGTCCTCTCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp CCGCTTGCTATCCCCCTCAGATCCCAGCACAAAGTAGGGCTAGGATaGAAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: PLAIPLRSQHKVGLG*KCLEETEKQLWSQL
Trigger: CAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTTTCATCCTAGCCCTACTTTGTGCTGGGATCTGAGGGGGATAGCAAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp TGCTATTCATGCTATCTGGTGTTAATCCTAGAGCAAGGAGCGACGTaGGGCCTGAACGAGATGGCAGCATTGGTACGAGGGGTGTGGTTC +
Preference number: 1 (lower is better)
Translates to: CYSCYLVLILEQGAT*GLNEMAALVRGVWF
Trigger: GAACCACACCCCTCGTACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAACACCAGATAGCATGAATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp AACAGGCACTGCAGGAGACGAGGGGAGGGATGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAG +
Preference number: 1 (lower is better)
Translates to: NRHCRRRGEGWVGEV*NGAEIHIPVLQESK
Trigger: CTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTCGTCTCCTGCAGTGCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp AAGAGGAAAAGTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTaGGCCAGTGGTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGAC +
Preference number: 1 (lower is better)
Translates to: KRKSDIFVFPTFSGC*ASGRQESTWLGVCD
Trigger: GTCACAAACACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACTTTTCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp CCGGTCCAGTTGAGCCTTCAGATGACTCCAGTCCCAGTTGCTGAGTaGCTGAAACTTCATGAGAGACTCCAAATAAGAACTGACAGCTGG +
Preference number: 1 (lower is better)
Translates to: PVQLSLQMTPVPVAE*LKLHERLQIRTDSW
Trigger: CCAGCTGTCAGTTCTTATTTGGAGTCTCTCATGAAGTTTCAGTCACTCAGCAACTGGGACTGGAGTCATCTGAAGGCTCAACTGGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 90 bp TGTTTAAAAGAAACAGGCACTGCAGGAGACGAGGGGAGGGATGGGTaGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTAC +
Preference number: 1 (lower is better)
Translates to: CLKETGTAGDEGRDG*AKSETVQKFIFRFY
Trigger: GTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTCGTCTCCTGCAGTGCCTGTTTCTTTTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 90 bp TTAAAGAGGAAAAGTGACATTTTTGTGTTCCCGACTTTCAGTGGATaGTGGGCCAGTGGTCGGCAAGAGTCGACGTGGCTTGGTGTTTGT +
Preference number: 1 (lower is better)
Translates to: LKRKSDIFVFPTFSG*WASGRQESTWLGVC
Trigger: ACAAACACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACTTTTCCTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp CAATGTAAGCTTGTAGTGACCGTTAGGCAGCTTAAAGAGGAAAAGTaGCATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGG +
Preference number: 1 (lower is better)
Translates to: QCKLVVTVRQLKEEK*HFCVPDFQWMLGQW
Trigger: CCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACTTTTCCTCTTTAAGCTGCCTAACGGTCACTACAAGCTTACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp TCCTTGACTGAACGAATGAAACCCATCAAAACTCGCTGTTCACCCTaGGATAGAATAGATTTATTAGCAAGAGGTAATCAGGAAACATAT +
Preference number: 1 (lower is better)
Translates to: SLTERMKPIKTRCSP*DRIDLLARGNQETY
Trigger: ATATGTTTCCTGATTACCTCTTGCTAATAAATCTATTCTATCTCAGGGTGAACAGCGAGTTTTGATGGGTTTCATTCGTTCAGTCAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 90 bp GAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCA +
Preference number: 1 (lower is better)
Translates to: ESKNKDDLYSWRSTY*RRKSSETKRICTVS
Trigger: TGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGGGAGGATGCCTGGGTaGCCACCTCAACCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKGRMPG*PPQPRS
Trigger: GCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCC...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR GCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAAACATGCTGGGAGGATaGCTGGGTGGCCACCTCAAC +
Preference number: 2 (lower is better)
Translates to: PSHTERPRVDAPMNSPSANMLGG*LGGHLN
Trigger: GTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTT...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGGAGGGGAGGGATGGGTaGGCGAAGTCTGAAACGGTG +
Preference number: 2 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEEGRDG*AKSETV
Trigger: CACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGTGGATGCTGGGCCAGTaGTCGGCAAGAGTCGACGTG +
Preference number: 2 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKWMLGQ*SARVDV
Trigger: CACGTCGACTCTTGCCGACCACTGGCCCAGCATCCA...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGGTGGCTTGGTGTTTGTaGCTCCATTTCCTCGGGAAG +
Preference number: 2 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEVAWCL*LHFLGK
Trigger: CTTCCCGAGGAAATGGAGTCACAAACACCAAGCCAC...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR GCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGTAGTGGAGCATGCCTaGCACTTCGGAGTTAACCTG +
Preference number: 2 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKVVEHA*HFGVNL
Trigger: CAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTAC...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGCTACATGGAACATGCTaGGAGGATGCCTGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKLHGTC*EDAWVA
Trigger: GGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAG...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCAGGGGAGGCGGCCTTaGGAGCTCTGGAGTGGGTTG +
Preference number: 2 (lower is better)
Translates to: SERLSDLAELMKQVKLAIQGRRP*ELWSGL
Trigger: CAACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCTCAACCCAGGAGCCTaGGCTGGGGAGGGACGGAAG +
Preference number: 2 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYLNPGA*AGEGRK
Trigger: CTTCCGTCCCTCCCCAGCCCAGGCTCCTGGGTTGAG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCTGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCAT +
Preference number: 2 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVWVGEV*NGAEIH
Trigger: ATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCA...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACTGCTGGGAGGATGCCTaGGTGGCCACCTCAACCCAG +
Preference number: 2 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYCWEDA*VATSTQ
Trigger: CTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCA...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCTGGACTTCAGGGTATaGTTTCCCCCTCCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYLDFRV*FPPPAA
Trigger: GGCGGCGGGAGGGGGAAACCATACCCTGAAGTCCAG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGACCTGCGATTTTGGCTaGAGAAGCTGCTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKETCDFG*RSCFGN
Trigger: ATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGT...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 90 bp GAGGACTCCCTTCCGTCCAGGTTACTGGGAGACACATGGGGAGTTTaGAGACCTGCGATTTTGGCTGGAGAAGCTGCTTTGGAAATTGAC +
Preference number: 2 (lower is better)
Translates to: EDSLPSRLLGDTWGV*RPAILAGEAALEID
Trigger: GTCAATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAAGGGAGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCATGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAWRSTY*RRKSSE
Trigger: TTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCA...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCTACATGGAACATGCTaGGAGGATGCCTGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: SERLSDLAELMKQVKLAILHGTC*EDAWVA
Trigger: GGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTTGGGAGCTCTGGAGTaGGTTGTGCCTTGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: SERLSDLAELMKQVKLAILGALE*VVPCSG
Trigger: CCCACTGCAAGGCACAACCCACTCCAGAGCTCCCAA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 90 bp TCCAGGTTACTGGGAGACACATGGGGAGTTTTGAGACCTGCGATTTaGGCTGGAGAAGCTGCTTTGGAAATTGACATCACCATCAGCGGG +
Preference number: 2 (lower is better)
Translates to: SRLLGDTWGVLRPAI*AGEAALEIDITISG
Trigger: CCCGCTGATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCACAACCCATAGAACTGTaGAAGGTAACAAAAATGGTT +
Preference number: 2 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAQPIEL*KVTKMV
Trigger: AACCATTTTTGTTACCTTTCACAGTTCTATGGGTTG...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTTACTGGGAGACACATaGGGAGTTTTGAGACCTGCG +
Preference number: 2 (lower is better)
Translates to: SERLSDLAELMKQVKLAILLGDT*GVLRPA
Trigger: CGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGACTTTCAGTGGATGCTaGGCCAGTGGTCGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQTFSGC*ASGRQE
Trigger: CTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGT...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 90 bp TGTGACTCCATTTCCTCGGGAAGTCTAGGGCCTCATCCAGTTGTATaGAGACTGCTATTCATGCTATCTGGTGTTAATCCTAGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: CDSISSGSLGPHPVV*RLLFMLSGVNPRAR
Trigger: CCTTGCTCTAGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCCTAGACTTCCCGAGGAAATGGAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCTCATCCAGTTGTATTaGGACTGCTATTCATGCTAT +
Preference number: 2 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYLIQLY*DCYSCY
Trigger: ATAGCATGAATAGCAGTCTCAATACAACTGGATGAG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGTTATAACAACTACATaGAACATGCTGGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQVITTT*NMLGGC
Trigger: GCATCCTCCCAGCATGTTCCATGTAGTTGTTATAAC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDWRSTY*RRKSSE
Trigger: TTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp CAGGTCCCAGGGGAGGCGGCCTTGGGAGCTCTGGAGTaGGTTGTGCCTTGCAGTGGGCCCCATGCCTGTGAC +
Preference number: 3 (lower is better)
Translates to: QVPGEAALGALE*VVPCSGPHACD
Trigger: GTCACAGGCATGGGGCCCACTGCAAGGCACAACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTGGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 72 bp GAGGAGCCCAAGCCACACAGAGAGGCCACGTGTGGATaGTCCCATGAACAGCCCCAGTGCAGCCCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: EEPKPHREATCG*SHEQPQCSPAD
Trigger: GTCTGCTGGGCTGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp GCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTaGCTGCAGGTCCCAGGGGAGGCGGCCTTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: AWRKRKSSYGAS*LQVPGEAALGA
Trigger: AGCTCCCAAGGCCGCCTCCCCTGGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp AACAACTACATGGAACATGCTGGGAGGATGCCTGGGTaGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: NNYMEHAGRMPG*PPQPRSLGWGG
Trigger: CCCTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAGTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 72 bp CTGGGCAGGATGGCATCTGGGCAGCCTTGTAGCTTCTaGCTGAGGCTGCTGGAACAGTCGCTCTTGGAACCC +
Preference number: 3 (lower is better)
Translates to: LGRMASGQPCSF*LRLLEQSLLEP
Trigger: GGGTTCCAAGAGCGACTGTTCCAGCAGCCTCAGGCAGAAGCTACAAGGCTGCCCAGATGCCATCCTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp AACGAGATGGCAGCATTGGTACGAGGGGTGTGGTTCTaGGCAGAGAGGACTCCCTTCCGTCCAGGTTACTGG +
Preference number: 3 (lower is better)
Translates to: NEMAALVRGVWF*AERTPFRPGYW
Trigger: CCAGTAACCTGGACGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATCTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp CAGTGGTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTaGCTCCATTTCCTCGGGAAGTCTAGGGCCTCATCC +
Preference number: 3 (lower is better)
Translates to: QWSARVDVAWCL*LHFLGKSRASS
Trigger: GGATGAGGCCCTAGACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp CCAGTGCAGCCCAGCAGACATCAACATCCAGCCATGTaGCAGCGCCATCTTGGTGCACCAACTAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: PVQPSRHQHPAM*QRHLGAPTRAP
Trigger: TGGTGCTCTAGTTGGTGCACCAAGATGGCGCTGTCACATGGCTGGATGTTGATGTCTGCTGGGCTGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 72 bp CCAGTTATAACAACTACATGGAACATGCTGGGAGGATaGCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: PVITTTWNMLGG*LGGHLNPGAWA
Trigger: AGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAGTTGTTATAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp AGTGGATGCTGGGCCAGTGGTCGGCAAGAGTCGACGTaGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGT +
Preference number: 3 (lower is better)
Translates to: SGCWASGRQEST*LGVCDSISSGS
Trigger: ACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGTTGAGACCTGCGATTTaGGCTGGAGAAGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPLRPAI*AGEAAL
Trigger: CAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAA...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCAACGAGATGGCAGCATaGGTACGAGGGGTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVNEMAA*VRGVWF
Trigger: GAACCACACCCCTCGTACCAATGCTGCCATCTCGTT...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAAAGAGTCGACGTGGCTaGGTGTTTGTGACTCCATTT +
Preference number: 3 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAKSRRG*VFVTPF
Trigger: AAATGGAGTCACAAACACCAAGCCACGTCGACTCTT...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp AAACTGTTGGTGCCTAAAAAGCAGGTATGGTGTCCTTaGCACTCTGGATCTCCGGTCCCAGGCTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: KLLVPKKQVWCP*HSGSPVPGWAG
Trigger: CCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCTGCTTTTTAGGCACCAACAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp TTGACATCACCATCAGCGGGAAGATTTGTCAATGACTaGACTTCAGGGTATGGTTTCCCCCTCCCGCCGCCC +
Preference number: 3 (lower is better)
Translates to: LTSPSAGRFVND*TSGYGFPLPPP
Trigger: GGGCGGCGGGAGGGGGAAACCATACCCTGAAGTCCAGTCATTGACAAATCTTCCCGCTGATGGTGATGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp TGCTATCTGGTGTTAATCCTAGAGCAAGGAGCGACGTaGGGCCTGAACGAGATGGCAGCATTGGTACGAGGG +
Preference number: 3 (lower is better)
Translates to: CYLVLILEQGAT*GLNEMAALVRG
Trigger: CCCTCGTACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAACACCAGATAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp TGCAGGAGACGAGGGGAGGGATGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCATATTCCGGTTCTACAG +
Preference number: 3 (lower is better)
Translates to: CRRRGEGWVGEV*NGAEIHIPVLQ
Trigger: CTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTCGTCTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp GAGGACTCCCTTCCGTCCAGGTTACTGGGAGACACATaGGGAGTTTTGAGACCTGCGATTTTGGCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: EDSLPSRLLGDT*GVLRPAILAGE
Trigger: TTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAAGGGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp AGTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTaGGCCAGTGGTCGGCAAGAGTCGACGTGGCTTGGT +
Preference number: 3 (lower is better)
Translates to: SDIFVFPTFSGC*ASGRQESTWLG
Trigger: ACCAAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCATGGAGTCTAAGATTCTaGTATGCAAGGGTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAWSLRF*YARVLF
Trigger: AAACAGCACCCTTGCATACAAGAATCTTAGACTCCA...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCCATCAGCGGGAAGATTaGTCAATGACTGGACTTCAG +
Preference number: 3 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVHQRED*SMTGLQ
Trigger: CTGAAGTCCAGTCATTGACAAATCTTCCCGCTGATG...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGCTGGAGAAGCTGCTTaGGAAATTGACATCACCATC +
Preference number: 3 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVAGEAA*EIDITI
Trigger: GATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAGC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCACTCATCAAATATTCCTaGACTGAACGAATGAAACCC +
Preference number: 3 (lower is better)
Translates to: PSHTERPRVDAPMNSPSALIKYS*TERMKP
Trigger: GGGTTTCATTCGTTCAGTCAAGGAATATTTGATGAG...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp GAAATTGACATCACCATCAGCGGGAAGATTTGTCAATaGCTGGACTTCAGGGTATGGTTTCCCCCTCCCGCC +
Preference number: 3 (lower is better)
Translates to: EIDITISGKICQ*LDFRVWFPPPA
Trigger: GGCGGGAGGGGGAAACCATACCCTGAAGTCCAGTCATTGACAAATCTTCCCGCTGATGGTGATGTCAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 72 bp AAAAGTGACATTTTTGTGTTCCCGACTTTCAGTGGATaGTGGGCCAGTGGTCGGCAAGAGTCGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: KSDIFVFPTFSG*WASGRQESTWL
Trigger: AAGCCACGTCGACTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp ATCCCCCTCAGATCCCAGCACAAAGTAGGGCTAGGATaGAAATGCCTGGAGGAAACGGAAAAGCAGTTATGG +
Preference number: 3 (lower is better)
Translates to: IPLRSQHKVGLG*KCLEETEKQLW
Trigger: CCATAACTGCTTTTCCGTTTCCTCCAGGCATTTTCATCCTAGCCCTACTTTGTGCTGGGATCTGAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCGACACATGGGGAGTTTaGAGACCTGCGATTTTGGCT +
Preference number: 3 (lower is better)
Translates to: SERLSDLAELMKQVKLAIDTWGV*RPAILA
Trigger: AGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTC...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCCTCATCAAATATTCCTaGACTGAACGAATGAAACCC +
Preference number: 3 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPLIKYS*TERMKP
Trigger: GGGTTTCATTCGTTCAGTCAAGGAATATTTGATGAG...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAAAAGAGTCGACGTGGCTaGGTGTTTGTGACTCCATTT +
Preference number: 3 (lower is better)
Translates to: AELMKQVKLAIKISWQSKKSRRG*VFVTPF
Trigger: AAATGGAGTCACAAACACCAAGCCACGTCGACTCTT...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCCTCATCCAGTTGTATaGAGACTGCTATTCATGCTA +
Preference number: 3 (lower is better)
Translates to: SERLSDLAELMKQVKLAIPHPVV*RLLFML
Trigger: TAGCATGAATAGCAGTCTCAATACAACTGGATGAGG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp AATAGGCAACTGAAACAGTCTTCCCCACCAAACTGTTaGTGCCTAAAAAGCAGGTATGGTGTCCTTGACACT +
Preference number: 3 (lower is better)
Translates to: NRQLKQSSPPNC*CLKSRYGVLDT
Trigger: AGTGTCAAGGACACCATACCTGCTTTTTAGGCACCAACAGTTTGGTGGGGAAGACTGTTTCAGTTGCCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp CTTGTAGTGACCGTTAGGCAGCTTAAAGAGGAAAAGTaGCATTTTTGTGTTCCCGACTTTCAGTGGATGCTG +
Preference number: 3 (lower is better)
Translates to: LVVTVRQLKEEK*HFCVPDFQWML
Trigger: CAGCATCCACTGAAAGTCGGGAACACAAAAATGTCACTTTTCCTCTTTAAGCTGCCTAACGGTCACTACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp TTGAGCCTTCAGATGACTCCAGTCCCAGTTGCTGAGTaGCTGAAACTTCATGAGAGACTCCAAATAAGAACT +
Preference number: 3 (lower is better)
Translates to: LSLQMTPVPVAE*LKLHERLQIRT
Trigger: AGTTCTTATTTGGAGTCTCTCATGAAGTTTCAGTCACTCAGCAACTGGGACTGGAGTCATCTGAAGGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp CTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTaGCAGTCAAAAGAAGGATCTAGAATCTTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: LMKQVKLAIKIS*QSKEGSRIFSL
Trigger: GAGGGAGAAGATTCTAGATCCTTCTTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR GCA 72 bp TTTAAGCCATTATGTTTTGGAGTGGCTTGTTCTTGGTaGAATAGGCAACTGAAACAGTCTTCCCCACCAAAC +
Preference number: 3 (lower is better)
Translates to: FKPLCFGVACSW*NRQLKQSSPPN
Trigger: GTTTGGTGGGGAAGACTGTTTCAGTTGCCTATTGCACCAAGAACAAGCCACTCCAAAACATAATGGCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CCA 72 bp AAACTTCATGAGAGACTCCAAATAAGAACTGACAGCTaGACCCAGTCAACCCATAGAACTGTGAAAGGTAAC +
Preference number: 3 (lower is better)
Translates to: KLHERLQIRTDS*TQSTHRTVKGN
Trigger: GTTACCTTTCACAGTTCTATGGGTTGACTGGGTCCAGCTGTCAGTTCTTATTTGGAGTCTCTCATGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp GAACGAATGAAACCCATCAAAACTCGCTGTTCACCCTaGGATAGAATAGATTTATTAGCAAGAGGTAATCAG +
Preference number: 3 (lower is better)
Translates to: ERMKPIKTRCSP*DRIDLLARGNQ
Trigger: CTGATTACCTCTTGCTAATAAATCTATTCTATCTCAGGGTGAACAGCGAGTTTTGATGGGTTTCATTCGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR TCA 72 bp AACAAGGACGATTTGTATTCTTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAAACCAAACGAATATGT +
Preference number: 3 (lower is better)
Translates to: NKDDLYSWRSTY*RRKSSETKRIC
Trigger: ACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGCGCGCTGCCTCTCTCTaGCGCTCGCTCGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGERAASL*RSLARS
Trigger: GGAGCGAGCGAGCGAGCGCCAGAGAGAGGCAGCGCG...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTCTCCAGCGGCTCCTTaGCCGACAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGSPAAP*PTAPAW
Trigger: CCAAGCCGGCGCTGTCGGCCAAGGAGCCGCTGGAGA...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGAGTTATGGAGCCAGCTaGCTGCAGGTCCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGESYGAS*LQVPGE
Trigger: CTCCCCTGGGACCTGCAGCCAGCTGGCTCCATAACT...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCACGCTCAACGTGCTCATaGGGCGTGTGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSARSTCS*GVWARS
Trigger: GCTCCTGGCCCACACGCCTCATGAGCACGTTGAGCG...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGGGCGCAGGAAATTGTTaGCAAGGATGTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGEGAGNC*QGCAAA
Trigger: AGCAGCTGCACATCCTTGTCAACAATTTCCTGCGCC...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCACCAGCTTCCGGACTGTaGGGAGCCCAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAPASGL*GAQATQ
Trigger: CTGTGTGGCTTGGGCTCCTCACAGTCCGGAAGCTGG...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGCGGCGAGGAGAACTTaGGGGTGGCGCGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVAARRT*GWRAGT
Trigger: AGTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGGGTAGCCTTTGCGCGTaGCGTCCTTGCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEGSLCA*RPCAPA
Trigger: TGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACC...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGTGGCGCGCGGGGACTTaGGGGGTTCACCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKWRAGT*GVHRTG
Trigger: TCCTGTACGGTGAACCCCCCAAGTCCCCGCGCGCCA...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGTTGGGGTGCCCTCGTTaGCCCCGGCGGTTGCTATGG +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPLGCPR*PRRLLW
Trigger: CCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAA...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCCACGATGGCGGTGGTaGAGACGCGGTAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEPRWRW*RRGRSA
Trigger: TGCACTCCTACCGCGTCTTCACCACCGCCATCGTGG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGCCACGATGGCGGTGGTaGAGACGCGGTAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKPRWRW*RRGRSA
Trigger: TGCACTCCTACCGCGTCTTCACCACCGCCATCGTGG...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGTGCTCAGGTAGCCTTTaGGCGTGCCGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPCSGSL*ACRPCA
Trigger: CGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCA...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAGAGGGGAGGGATGGGTaGGCGAAGTCTGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAEGRDG*AKSETV
Trigger: CACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTATACCATTCCCCGCTaGAACCTCTTCTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGYTIPR*NLFSAP
Trigger: CGGAGCGGAGAAGAGGTTCCAGCGGGGAATGGTATA...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCACAGCTCCTCCAGTTTaGACTTGGCGTAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGTAPPV*TWRSPG
Trigger: GCCTGGACTACGCCAAGTCCAAACTGGAGGAGCTGT...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGCTGGACTTCAGGGTATaGTTTCCCCCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPLDFRV*FPPPAA
Trigger: GGCGGCGGGAGGGGGAAACCATACCCTGAAGTCCAG...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCAGGGGAGGCGGCCTTaGGAGCTCTGGAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGQGRRP*ELWSGL
Trigger: CAACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCATTGGAGTTGCAGCTaGGGGCGGCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWHWSCS*GRPGPG
Trigger: CCCTGGACCTGGCCGCCCTCAGCTGCAACTCCAATG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCCAGCGTGGCCTTGCTaGAGGGTGACATGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGPAWPC*RVTWPS
Trigger: ACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGGCTCCGGGTCGTGCATaGCTTCTTCCAGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPAPGRA*LLPGSR
Trigger: TCGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGC...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCCATCCTCGATCTGCTaGCGAAGCTGCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEPSSIC*RSCLAT
Trigger: CGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAAGGATGTGCAGCTGCTaGACGTACTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSARMCSC*TYSASA
Trigger: GGCTGAGGCTGAGTACGTGCAGCAGCTGCACATCCT...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAGGGCGACAGTCTGGGTaGACTGGATGCGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAGRQSG*TGCAHC
Trigger: ACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCC...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCATGCTGAACACCACCTaGTTCCTCTTGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGMLNTT*FLLRML
Trigger: CAGCATGCGCAAGAGGAACCAGGTGGTGTTCAGCAT...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCATGGGCCAGGAGCTCATaGAGGGTCAGGATGTACCTG +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAWARSS*RVRMYL
Trigger: CAGGTACATCCTGACCCTCCATGAGCTCCTGGCCCA...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGCATCGTGCATTATTCTaGACAGCTCCTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGEHRALF*TAPPVW
Trigger: CCAAACTGGAGGAGCTGTCCAGAATAATGCACGATG...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTACATTGGAGTTGCAGCTaGGGGCGGCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVHWSCS*GRPGPG
Trigger: CCCTGGACCTGGCCGCCCTCAGCTGCAACTCCAATG...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCATCTCACAGCCTTCGATaGTCATGCGCTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSASHSLR*SCARWP
Trigger: TGGCCATCGAGCGCATGATCATCGAAGGCTGTGAGA...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCGAGGGGTGTGGTTCTaGGCAGAGAGGACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGRGVWF*AERTPF
Trigger: GAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACGAGCGACGTGGGGCCTaGACGAGATGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDERRGA*TRWQHW
Trigger: CCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTC...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTTGGCCCCGGCGGTTaGTATGGCAAAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWVGPGG*YGKGRG
Trigger: GCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAAC...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTCTAGCAGGGTCAGCTaGTCCGCGATCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGSSRVS*SAISRA
Trigger: AGCCCTGGAGATCGCGGAGCAGCTGACCCTGCTAGA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCCAGTACCCGGAAGATaGCGCCCGACCCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWPVPGR*RPTLLR
Trigger: CCGGAGGAGGGTCGGGCGGCATCTTCCGGGTACTGG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTGGGCCAGCTGGAGATaGGGGCCTTCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRWASWR*GPSGLG
Trigger: ACCAAGGCCTGAAGGCCCGCATCTCCAGCTGGCCCA...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAAGTCACGGTTCTGCTTaGAGTGGGCCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSASHGSA*SGPGSA
Trigger: TGCAGATCCTGGCCCACTGCAAGCAGAACCGTGACT...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCCGACTTTCAGTGGATaGTGGGCCAGTGGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEPTFSG*WASGRQ
Trigger: TTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGAGTCCTGAGAGTGCTTaGACACCCAGTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKSPESA*TPSGGA
Trigger: TGCTCCGCCACTGGGTGTCCAAGCACTCTCAGGACT...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCCTACACTCCAGGATCTaGCGCCGAGCCGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVLHSRI*RRAAAS
Trigger: AGAAGCCGCGGCTCGGCGCCAGATCCTGGAGTGTAG...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGCATAAGGAATCTTCTTaGAGACGAGGTGATCTAGCA +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGEHKESS*RRGDLA
Trigger: TGCTAGATCACCTCGTCTTCAAGAAGATTCCTTATG...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCAAAGTAGGGCTAGGATaGAAATGCCTGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGKVGLG*KCLEET
Trigger: CGTTTCCTCCAGGCATTTTCATCCTAGCCCTACTTT...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGATCTGCTGCCGAAGCTaGTTGGCCACGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPICCRS*LATVFS
Trigger: AGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGAT...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGAGTCACGGTTCTGCTTaGAGTGGGCCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPSHGSA*SGPGSA
Trigger: TGCAGATCCTGGCCCACTGCAAGCAGAACCGTGACT...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGGTGATGGACAGAGGTaGCGGCGAGGAGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRGDGQR*RRGELA
Trigger: CGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGGGGGAAACCCTGCACTaGCTAAGGACATCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGGETLH*LRTSSG
Trigger: ACCGGAGGATGTCCTTAGCCAGTGCAGGGTTTCCCC...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCGCGCTGCCTCTCTCTaGCGCTCGCTCGCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIRAASL*RSLARS
Trigger: GGAGCGAGCGAGCGAGCGCCAGAGAGAGGCAGCGCG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCATGTTATCCACACACTaGCTGATGTCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGMLSTH*LMSLVH
Trigger: GTGGACCAGTGACATCAGCCAGTGTGTGGATAACAT...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATTGTACCCTGCCCCAGTaGGGCCTGAGGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNCTLPQ*GLRWGQ
Trigger: CTGCCCCCACCTCAGGCCTCACTGGGGCAGGGTACA...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTCTCATGGAGACTTCTaGGCTCTGCTTGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGSHGDF*ALLAER
Trigger: GCGCTCAGCAAGCAGAGCTCAGAAGTCTCCATGAGA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCTGTCAGCATGGGGTaGCCGGATGTAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWAVSMG*PDVVLD
Trigger: ATCCAGGACTACATCCGGTCACCCCATGCTGACAGC...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGGAGACTTCTGAGCTCTaGTTGCTGAGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGETSEL*LLSAEG
Trigger: CCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGTCTC...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCCACCTGGTTCCTCTTaGGCATGCTGTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRPPGSS*ACCQHG
Trigger: CCCATGCTGACAGCATGCGCAAGAGGAACCAGGTGG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCAGTGGGCCAGGATCTaGAGGCTGTACTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWQWARI*RLYWWL
Trigger: CAACCACCAGTACAGCCTGCAGATCCTGGCCCACTG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTCGAAGTCACGGTTCTaGTTGCAGTGGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGSKSRF*LQWARI
Trigger: GATCCTGGCCCACTGCAAGCAGAACCGTGACTTCGA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTCACTGGTCCACGCTaGCTTCTCCTGTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVTGPR*LLLSGR
Trigger: TCGTCCAGACAGGAGAAGGCAGCGTGGACCAGTGAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCAACTACATGGAACATaGTGGGAGGATGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEQLHGT*WEDAWV
Trigger: CACCCAGGCATCCTCCCAGCATGTTCCATGTAGTTG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGGTAGTGGAGCATGCCTaGCACTTCGGAGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPVVEHA*HFGVNL
Trigger: CAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTAC...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGCTCTGGAGTGGGTTGTaGCTTGCAGTGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKLWSGL*LAVGPM
Trigger: CATGGGGCCCACTGCAAGGCACAACCCACTCCAGAG...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGCCTTCTTTCTCCGCTTaGTATCCCCCTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPPSFSA*YPPQIP
Trigger: TGGGATCTGAGGGGGATAGCAAGCGGAGAAAGAAGG...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTCACCTGGGTCCTCCTaGGTCAGAGTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGSPGSS*VRVLMM
Trigger: CATCATCAGGACTCTGACCCAGGAGGACCCAGGTGA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPSSSVI*LSPGSS
Trigger: GGAGGACCCAGGTGACAACCAGATCACGCTGGAGGA...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGGATCCCCTTCTGCATaGTGCTCAGAGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKGSPSA*CSEASE
Trigger: CTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCCCAGGGACGCGACGTaGCCATCATTCAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWPRDAT*PSFSRI
Trigger: GATCCGGCTGAATGATGGCCACGTCGCGTCCCTGGG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCGAGGGTCCTGTAGCTaGCATGTGCAATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDRGSCS*HVQWLP
Trigger: TGGCAGCCATTGCACATGCCAGCTACAGGACCCTCG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCGGGCGACAGTCTGGGTaGACTGGATGCGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPGRQSG*TGCAHC
Trigger: ACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCC...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGATGCTGAACACCACCTaGTTCCTCTTGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPMLNTT*FLLRML
Trigger: CAGCATGCGCAAGAGGAACCAGGTGGTGTTCAGCAT...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCAGCGTGGGCCAGCTaGAGATGCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPAWAS*RCGPSG
Trigger: GCCTGAAGGCCCGCATCTCCAGCTGGCCCACGCTGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGCTCAACCCAGGAGCCTaGGCTGGGGAGGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLLNPGA*AGEGRK
Trigger: CTTCCGTCCCTCCCCAGCCCAGGCTCCTGGGTTGAG...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGAGCAAGGAGCGACGTaGGGCCTGAACGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKEQGAT*GLNEMA
Trigger: TGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCGGCAAGAGTCGACGTaGCTTGGTGTTTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGRQEST*LGVCDS
Trigger: GGAGTCACAAACACCAAGCCACGTCGACTCTTGCCG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTTCCCGACTTTCAGTaGATGCTGGGCCAGTGGTCG +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVPDFQ*MLGQWS
Trigger: CGACCACTGGCCCAGCATCCACTGAAAGTCGGGAAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCGGGGCTTCCCTTCCTaGGTGACAGTGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDRGFPS*VTVRTH
Trigger: ATGTGTCCTCACTGTCACCCAGGAAGGGAAGCCCCG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCCGGGGCTTCCCTTCCTaGGTGACAGTGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVRGFPS*VTVRTH
Trigger: ATGTGTCCTCACTGTCACCCAGGAAGGGAAGCCCCG...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGCGGCCTTGGGAGCTCTaGAGTGGGTTGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKRPWEL*SGLCLA
Trigger: TGCAAGGCACAACCCACTCCAGAGCTCCCAAGGCCG...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCCGCCGGCGGCTCGGTaGCGATGTCTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIPPAAR*RCLGDG
Trigger: TCCATCACCAAGACATCGTCACCGAGCCGCCGGCGG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGCCAGCGTGGCCTTGCTaGAGGGTGACATGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DLAELMKQVKLAIKISWQPAWPC*RVTWPS
Trigger: ACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGG...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGGGTTCATGGACGAGGTaGTCTCCAGTACGGCATTGT +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGGSWTR*SPVRHC
Trigger: ACAATGCCGTACTGGAGATCACCTCGTCCATGAACC...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGTGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEWVGEV*NGAEIH
Trigger: ATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCA...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGACTCTTGGTAGATGTTaGGCATGGGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKETLGRC*AWAAGC
Trigger: ACATCCTGCTGCCCATGCTCAACATCTACCAAGAGT...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTGGACACATAGAGCTTaGTGGTGTCCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWWTHRA*WCPAWP
Trigger: AGGCCACGCTGGACACCAGCAAGCTCTATGTGTCCA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCGGCCGACAAGGCACTaGGGTTATTGTCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDRPTRH*GYCPVH
Trigger: GTGAACTGGACAATAACCGCAGTGCCTTGTCGGCCG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGGTTGGCCCCGGCGGTTaGTATGGCAAAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DLAELMKQVKLAIKISWQVGPGG*YGKGRG
Trigger: GCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAAC...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGTTTGAGCCGGAAGATTaGACTGCGGTTCATGGACGA +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPFEPED*TAVHGR
Trigger: TCGTCCATGAACCGCAGTGCAATCTTCCGGCTCAAA...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTATGCGCGTGCCGTCCTTaGGCGCCAGCAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLCACRP*APAVPG
Trigger: CCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCA...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCCTGTAGCTGGCATGTaGAATGGCTGCCACCCATTC +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWPVAGM*NGCHPF
Trigger: GAATGGGTGGCAGCCATTGCACATGCCAGCTACAGG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCAGGGATGTGATCTCTaGCTTCAGCCGCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRQGCDL*LQPLDL
Trigger: GAGATCGAGCGGCTGAAGGCAGAGATCACATCCCTG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTGGCTTCCTCCTCCGTaGTTTCTGGCTCCTCCAATA +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGWLPPP*FLAPPI
Trigger: TATTGGAGGAGCCAGAAAGCACGGAGGAGGAAGCCA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGTCACTGGTCCACGCTaGCTTCTCCTGTCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKVTGPR*LLLSGR
Trigger: TCGTCCAGACAGGAGAAGGCAGCGTGGACCAGTGAC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGAACATGCTGGGAGGATaGCTGGGTGGCCACCTCAAC +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKNMLGG*LGGHLN
Trigger: GTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTT...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCAGCCTTGTAGCTTCTaGCTGAGGCTGCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDQPCSF*LRLLEQ
Trigger: CTGTTCCAGCAGCCTCAGGCAGAAGCTACAAGGCTG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGGAACGGGTGTATTCTaGGTCGTTGCGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWGTGVF*VVALLW
Trigger: CCAGAGCAACGCAACGACCCAGAATACACCCGTTCC...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCTGACTCCTCTCTCATaGAGACTTCTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKELTPLS*RLLSSA
Trigger: AGCAGAGCTCAGAAGTCTCCATGAGAGAGGAGTCAG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGTCCATTCCTCTGGTCTaGGGGAAACCCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKSIPLV*GKPCTG
Trigger: GCCAGTGCAGGGTTTCCCCCAGACCAGAGGAATGGA...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACAGCTGGCATGTGCAATaGCTGCCACCCATTCGTCAC +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDSWHVQ*LPPIRH
Trigger: GTGACGAATGGGTGGCAGCCATTGCACATGCCAGCT...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACGGGTCAGGATGTACCTaGGGATCTGGAACATGGGGT +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDGSGCT*GSGTWG
Trigger: ACCCCATGTTCCAGATCCCCAGGTACATCCTGACCC...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGGGTCAGGATGTACCTaGGGATCTGGAACATGGGGT +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRGSGCT*GSGTWG
Trigger: ACCCCATGTTCCAGATCCCCAGGTACATCCTGACCC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGTGGGCCAGGAGCTCATaGAGGGTCAGGATGTACCTG +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKWARSS*RVRMYL
Trigger: CAGGTACATCCTGACCCTCCATGAGCTCCTGGCCCA...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCCTCCAGTTTGGACTTaGCGTAGTCCAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWPPVWT*RSPGCC
Trigger: GCAACAGCCTGGACTACGCCAAGTCCAAACTGGAGG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCTCAACCCAGGAGCCTaGGCTGGGGAGGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLLNPGA*AGEGRK
Trigger: CTTCCGTCCCTCCCCAGCCCAGGCTCCTGGGTTGAG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGGAGGATGCCTGGGTaGCCACCTCAACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLGRMPG*PPQPRS
Trigger: GCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCC...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTGCTGGGAGGATGCCTaGGTGGCCACCTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: DLAELMKQVKLAIKISWQCWEDA*VATSTQ
Trigger: CTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCA...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGCTGGACTTCAGGGTATaGTTTCCCCCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DLAELMKQVKLAIKISWQLDFRV*FPPPAA
Trigger: GGCGGCGGGAGGGGGAAACCATACCCTGAAGTCCAG...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACTTTCAGTGGATGCTaGGCCAGTGGTCGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTFSGC*ASGRQE
Trigger: CTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGCATTATGTTTTGGAGTaGCTTGTTCTTGGTGCAATA +
Preference number: 4 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGEHYVLE*LVLGAI
Trigger: TATTGCACCAAGAACAAGCCACTCCAAAACATAATG...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCAGGGGAGGCGGCCTTaGGAGCTCTGGAGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLQGRRP*ELWSGL
Trigger: CAACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTGGTCTCAAAGTCCTaGGAGTGCTTGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRLVSKS*ECLDTQ
Trigger: CTGGGTGTCCAAGCACTCTCAGGACTTTGAGACCAA...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCGATCACCTTGCATTTaGGCTCATCGTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKERSPCI*AHRWSQ
Trigger: TTGAGACCAACGATGAGCTCAAATGCAAGGTGATCG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCTCAGACATGGGCACCTaGATGAGGGAACCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVSDMGT*MREPCL
Trigger: GAGACAAGGTTCCCTCATTCAGGTGCCCATGTCTGA...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCAGCTTCCGGACTGTaGGGAGCCCAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPASGL*GAQATQ
Trigger: CTGTGTGGCTTGGGCTCCTCACAGTCCGGAAGCTGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGACACGATTGGTGGCTaGTCTGCGGATCACAAACTC +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWDTIGG*SADHKL
Trigger: GAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTC...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGACGCCTTCAGCCATCTaGGTGATCTCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWTPSAI*VISSSV
Trigger: CACGCTGGAGGAGATCACGCAGATGGCTGAAGGCGT...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTCTAGCAGGGTCAGCTaGTCCGCGATCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGSSRVS*SAISRA
Trigger: AGCCCTGGAGATCGCGGAGCAGCTGACCCTGCTAGA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTGCTCAGGTAGCCTTTaGGCGTGCCGTCCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAICSGSL*ACRPCA
Trigger: CGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACAAGGATGTGCAGCTaGTGCACGTACTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTRMCS*CTYSAS
Trigger: TGAGGCTGAGTACGTGCAGCAGCTGCACATCCTTGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCTGGCTTCCTCCTCCGTaGTTTCTGGCTCCTCCAATA +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVWLPPP*FLAPPI
Trigger: TATTGGAGGAGCCAGAAAGCACGGAGGAGGAAGCCA...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGGATCTGCAGCACTTTaGAGGAGTTCATGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKGSAAL*RSSWFC
Trigger: GCAAAACCATGAACTCCTGCAAAGTGCTGCAGATCC...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGCGTATCGCCCTCATCTaGAATCTTGTTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPRIALI*NLVGEA
Trigger: AGCTTCACCAACAAGATTCCAGATGAGGGCGATACG...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCGTTCAAGACACGATTaGTGGCTGCTCTGCGGATCA +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRRSRHD*WLLCGS
Trigger: TGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTATGCTTGGACACCCAGTaGCGGAGCACGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVCLDTQ*RSTFKT
Trigger: TGTCTTGAACGTGCTCCGCCACTGGGTGTCCAAGCA...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTGCAGCCTTCCGCTCCTaGGTCAGGAGCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPAAFRS*VRSSGS
Trigger: CGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGC...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCCAGGGACGCGACGTaGCCATCATTCAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPRDAT*PSFSRI
Trigger: GATCCGGCTGAATGATGGCCACGTCGCGTCCCTGGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCACAGTCTGGGTGGACTaGATGCGCTCATTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPTVWVD*MRSLSL
Trigger: CAAGGACAATGAGCGCATCCAGTCCACCCAGACTGT...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAACAGCTCCTCCAGTTTaGACTTGGCGTAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVTAPPV*TWRSPG
Trigger: GCCTGGACTACGCCAAGTCCAAACTGGAGGAGCTGT...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACTGTCTCACAAAGGTCTaGCTGGTGTCCAGGAGGATC +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDCLTKV*LVSRRI
Trigger: GATCCTCCTGGACACCAGCCAGACCTTTGTGAGACA...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGTTGGGAGCTCTGGAGTaGGTTGTGCCTTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWLGALE*VVPCSG
Trigger: CCCACTGCAAGGCACAACCCACTCCAGAGCTCCCAA...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTGAGCTCTGCTTGCTaGGCGCTGAAGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNLSSAC*ALKGLR
Trigger: CCGAAGACCCTTCAGCGCTCAGCAAGCAGAGCTCAG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACTCTTGGTAGATGTTaGGCATGGGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTLGRC*AWAAGC
Trigger: ACATCCTGCTGCCCATGCTCAACATCTACCAAGAGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCAGGCGCCCCCTGGTaGTCTTGCCCTTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPGAPW*SCPFQT
Trigger: TGTCTGAAAAGGGCAAGATCACCAGGGGGCGCCTGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCGAGGGGTGTGGTTCTaGGCAGAGAGGACTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNRGVWF*AERTPF
Trigger: GAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCAGTTGCTGAGTGACTaGAACTTCATGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGQLLSD*NFMRDS
Trigger: GGAGTCTCTCATGAAGTTTCAGTCACTCAGCAACTG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACATGGCCGAGTACATaGTGGTGTAGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTWPST*WCSHWS
Trigger: ACTCCAATGGCTACACCAGCATGTACTCGGCCATGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCGGCCGACAAGGCACTaGGGTTATTGTCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWRPTRH*GYCPVH
Trigger: GTGAACTGGACAATAACCGCAGTGCCTTGTCGGCCG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACTTTGAGCCGGAAGATTaGACTGCGGTTCATGGACGA +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDFEPED*TAVHGR
Trigger: TCGTCCATGAACCGCAGTGCAATCTTCCGGCTCAAA...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCCCCTTCTGCATGGTaGTCAGAGGCCAGCGAGACC +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSPSAW*SEASET
Trigger: GGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACTCTGTCTCCACGATCTaGAGCAGGTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDSVSTI*SRCRYF
Trigger: GAAATACCTGCACCTGCTGCAGATCGTGGAGACAGA...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTCCCCATCCTCGATCTaGTGCCGAAGCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAISPSSI*CRSCLA
Trigger: GGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACTGGGCCAGCTGGAGATaGGGGCCTTCAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYWASWR*GPSGLG
Trigger: ACCAAGGCCTGAAGGCCCGCATCTCCAGCTGGCCCA...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAGTAGTGGAGCATGCCTaGCACTTCGGAGTTAACCTG +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVVVEHA*HFGVNL
Trigger: CAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTAC...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGTCGTTGCGTTGCTCTaGCAGCAGAGGTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWVVALL*QQRCGL
Trigger: CAATCCACACCTCTGCTGCCAGAGCAACGCAACGAC...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCCTGACTCCTCTCTCATaGAGACTTCTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVLTPLS*RLLSSA
Trigger: AGCAGAGCTCAGAAGTCTCCATGAGAGAGGAGTCAG...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGTTGTCTCCATTCCTCTaGTCTGGGGGAAACCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKLSPFL*SGGNPA
Trigger: TGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAA...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLSSSVI*LSPGSS
Trigger: GGAGGACCCAGGTGACAACCAGATCACGCTGGAGGA...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATGTCCCCGGGAGCAGCTaGGTCTGGGCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDVPGSS*VWAGLS
Trigger: GCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGAC...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGCCTCGCAGTCAGGCTTaGCCTCGTAGTGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLPRSQA*PRSASA
Trigger: TGCTGAAGCACTACGAGGCCAAGCCTGACTGCGAGG...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTACTGGGAGACACATaGGGAGTTTTGAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRLLGDT*GVLRPA
Trigger: CGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAA...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 72 bp CTTCCGTCCAGGTTACTGGGAGACACATGGGGAGTTTaGAGACCTGCGATTTTGGCTGGAGAAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LPSRLLGDTWGV*RPAILAGEAAL
Trigger: CAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTCCTTCATTGCCCCATaGCTTTTGAGAAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRSFIAP*LLRSKG
Trigger: GCCTTTGCTTCTCAAAAGTCATGGGGCAATGAAGGA...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACGTGACGATGTCTTGGTaGTGGACAGAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYVTMSW*WTEVAA
Trigger: CGCCGCCACCTCTGTCCATCACCAAGACATCGTCAC...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGCCTTGCTGAAGGGTaGCATGGCCGAGTACATGCT +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLGLAEG*HGRVHA
Trigger: AGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCC...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCTTGCTGAGCGCTaGAGGGTCTTCGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQLLAER*RVFGLL
Trigger: GAGAAGCCCGAAGACCCTTCAGCGCTCAGCAAGCAG...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGAGTGCAGGAAGGTGTTaGGGAAGTCGATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWSAGRC*GSRCSG
Trigger: TCCTGAGCATCGACTTCCTCAACACCTTCCTGCACT...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGTCCCAGTTGCTGAGTaGCTGAAACTTCATGAGAGA +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRVPVAE*LKLHER
Trigger: TCTCTCATGAAGTTTCAGTCACTCAGCAACTGGGAC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGAAGGCTAAGGTGGCCTaGACTCCTTATGTTGACTCA +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRKAKVA*TPYVDS
Trigger: TGAGTCAACATAAGGAGTGCAGGCCACCTTAGCCTT...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGAGACTTCTGAGCTCTaGTTGCTGAGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLETSEL*LLSAEG
Trigger: CCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGTCTC...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGATTGGTGGCTGCTCTaGGGATCACAAACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKDWWLL*GSQTPC
Trigger: ACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATCCAGTACCCGGAAGATaGCGCCCGACCCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDPVPGR*RPTLLR
Trigger: CCGGAGGAGGGTCGGGCGGCATCTTCCGGGTACTGG...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATCCCCATCCTCGATCTaGTGCCGAAGCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKSPSSI*CRSCLA
Trigger: GGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCACCTGGTTCCTCTTaGGCATGCTGTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPPGSS*ACCQHG
Trigger: CCCATGCTGACAGCATGCGCAAGAGGAACCAGGTGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATGCAGGGCACTGCTGCTaGGAAAGGAAGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNAGHCC*ERKDTV
Trigger: GACAGTGTCCTTCCTTTCCCAGCAGCAGTGCCCTGC...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATAGGAGAACTTGCGGGTaGCGCGCGGGGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDRRTCG*RAGTWG
Trigger: CCCCCAAGTCCCCGCGCGCCACCCGCAAGTTCTCCT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCGTTCAAGACACGATTaGTGGCTGCTCTGCGGATCA +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWRSRHD*WLLCGS
Trigger: TGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGCAGCCTTCCGCTCCTaGGTCAGGAGCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRAAFRS*VRSSGS
Trigger: CGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTAAGGGACACAGGGTaGGTCACAATTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVRDTG*VTIFQS
Trigger: GCTCTGAAAAATTGTGACCCACCCTGTGTCCCTTAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAGGGCTCAGCTTCAGGTaGGGAGTTTTGGTTCTATTC +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVGLSFR*GVLVLF
Trigger: GAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCC...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTCTACACTCCAGGATCTaGCGCCGAGCCGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPLHSRI*RRAAAS
Trigger: AGAAGCCGCGGCTCGGCGCCAGATCCTGGAGTGTAG...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCGAGGGTCCTGTAGCTaGCATGTGCAATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLRGSCS*HVQWLP
Trigger: TGGCAGCCATTGCACATGCCAGCTACAGGACCCTCG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATGCTGCCGAAGCTGCTTaGCCACGGTCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNAAEAA*PRSSLS
Trigger: AGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGC...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCGCTGTCTTCATCGTTaGGGGCGACAGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYRCLHR*GRQSGW
Trigger: CCACCCAGACTGTCGCCCCCAACGATGAAGACAGCG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGCCTCCAGTTTGGACTTaGCGTAGTCCAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLPPVWT*RSPGCC
Trigger: GCAACAGCCTGGACTACGCCAAGTCCAAACTGGAGG...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGTTCCGTCCAGGTTACTaGGAGACACATGGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKFRPGY*ETHGEF
Trigger: AAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAA...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATGGATGCTGGGCCAGTaGTCGGCAAGAGTCGACGTG +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKWMLGQ*SARVDV
Trigger: CACGTCGACTCTTGCCGACCACTGGCCCAGCATCCA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGACGGAAAAGCAGTTATaGAGCCAGCTGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWTEKQL*SQLAAG
Trigger: ACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGT...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGCTGCACTCCTTATGTTaGCTCACCCCAAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLLHSLC*LTPSRP
Trigger: TGGCCTACTTGGGGTGAGTCAACATAAGGAGTGCAG...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTCACAGGTAGGAAACTaGGTCTCAGAAAGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWSQVGN*VSERLR
Trigger: CCTTAACCTTTCTGAGACTCAGTTTCCTACCTGTGA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCCGCCGGCGGCTCGGTaGCGATGTCTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRPPAAR*RCLGDG
Trigger: TCCATCACCAAGACATCGTCACCGAGCCGCCGGCGG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTACTGGAATCTTGTTGGTaGAGCTGCTGGACACATAGA +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVLESCW*SCWTHR
Trigger: TCTATGTGTCCAGCAGCTTCACCAACAAGATTCCAG...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTACTGAGCTCTGCTTGCTaGGCGCTGAAGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLLSSAC*ALKGLR
Trigger: CCGAAGACCCTTCAGCGCTCAGCAAGCAGAGCTCAG...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTTGGTCTCAAAGTCCTaGGAGTGCTTGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGLVSKS*ECLDTQ
Trigger: CTGGGTGTCCAAGCACTCTCAGGACTTTGAGACCAA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCATAAGGAATCTTCTTaGAGACGAGGTGATCTAGCA +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGHKESS*RRGDLA
Trigger: TGCTAGATCACCTCGTCTTCAAGAAGATTCCTTATG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTCCAGGCGCCCCCTGGTaGTCTTGCCCTTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPPGAPW*SCPFQT
Trigger: TGTCTGAAAAGGGCAAGATCACCAGGGGGCGCCTGG...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGCTCATCCAGTTGTATTaGGACTGCTATTCATGCTAT +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKELIQLY*DCYSCY
Trigger: ATAGCATGAATAGCAGTCTCAATACAACTGGATGAG...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGCGGCGAGGAGAACTTaGGGGTGGCGCGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVAARRT*GWRAGT
Trigger: AGTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGCGGCGAGGAGAACTTaGGGGTGGCGCGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGAARRT*GWRAGT
Trigger: AGTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGC...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTGGACACATAGAGCTTaGTGGTGTCCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLWTHRA*WCPAWP
Trigger: AGGCCACGCTGGACACCAGCAAGCTCTATGTGTCCA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGACGCCTTCAGCCATCTaGGTGATCTCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQTPSAI*VISSSV
Trigger: CACGCTGGAGGAGATCACGCAGATGGCTGAAGGCGT...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTGCGCGTGCCGTCCTTaGGCGCCAGCAGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTCACRP*APAVPG
Trigger: CCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAGGAATTTTCTTCAAATaGGTTCATCATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAGIFFK*VHHEPI
Trigger: AATGGGCTCATGATGAACGCATTTGAAGAAAATTCC...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATACTGCTGGACAGCCTTaGCCAAGTCCTTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNTAGQP*PSPSLP
Trigger: GGGCAATGAAGGACTTGGCCAAGGCTGTCCAGCAGT...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACAGGAGAACTTGCGGGTaGCGCGCGGGGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYRRTCG*RAGTWG
Trigger: CCCCCAAGTCCCCGCGCGCCACCCGCAAGTTCTCCT...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTGGCCGAGTACATGCTaGTGTAGCCATTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGWPSTC*CSHWSC
Trigger: GCAACTCCAATGGCTACACCAGCATGTACTCGGCCA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATACACATAGAGCTTGCTaGTGTCCAGCGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNTHRAC*CPAWPC
Trigger: GCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGT...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATTTGGGGTGCCCTCGTTaGCCCCGGCGGTTGCTATGG +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHLGCPR*PRRLLW
Trigger: CCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAA...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAAGTACTTCTCCTTGTTTaGGGTGCCCTCGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKVLLLV*GALVGP
Trigger: GGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTAC...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGGTACTTCTCCTTGTTTaGGGTGCCCTCGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQVLLLV*GALVGP
Trigger: GGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTAC...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGGCAGCCTTCCGCTCCTaGGTCAGGAGCTCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQAAFRS*VRSSGS
Trigger: CGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGC...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCACCTGGGTCCTCCTaGGTCAGAGTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSPGSS*VRVLMM
Trigger: CATCATCAGGACTCTGACCCAGGAGGACCCAGGTGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCTCAGGTGGGGAGTTTTaGTTCTATTCGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVSGGEF*FYSERR
Trigger: TCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGA...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGATGCCTCATGCTCTGTaGCGAGGGTCCTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQMPHAL*RGSCSW
Trigger: CCAGCTACAGGACCCTCGCCACAGAGCATGAGGCAT...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTATTGGGGGCGACAGTCTaGGTGGACTGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLLGATV*VDWMRS
Trigger: TGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAA...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCTTGGCCGGATCCTTTaGCTTCCTCCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAILGRIL*LPPPCF
Trigger: AAAGCACGGAGGAGGAAGCCAAAGGATCCGGCCAAG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACCTGCGATTTTGGCTaGAGAAGCTGCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTCDFG*RSCFGN
Trigger: ATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGGAGTGGCTTGTTCTTaGTGCAATAGGCAACTGAAA +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRGVACS*CNRQLK
Trigger: TTTCAGTTGCCTATTGCACCAAGAACAAGCCACTCC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTGGCCTTGCTGAAGGGTaGCATGGCCGAGTACATGCT +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPGLAEG*HGRVHA
Trigger: AGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCC...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTTTTGATCAATATCTaGCTCCTCTCTCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVLINI*LLSHGD
Trigger: GTCTCCATGAGAGAGGAGTCAGATATTGATCAAAAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCACGACAGGAGGTCATaGCGACTCCATTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGHDRRS*RLHCYR
Trigger: CCTATAACAATGGAGTCGTCATGACCTCCTGTCGTG...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTACGCGATCTCCAGGGCTaGGTGGTTTTCAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLRDLQG*VVFKGL
Trigger: GAGCCCTTTGAAAACCACTCAGCCCTGGAGATCGCG...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTGTCCTCATTGCGGATaGTTTCTGAAGCAATCAAGT +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWCPHCG*FLKQSS
Trigger: ACTTGATTGCTTCAGAAATCATCCGCAATGAGGACA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCGGTTCATGGACGAGGTaGTCTCCAGTACGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIGSWTR*SPVRHC
Trigger: ACAATGCCGTACTGGAGATCACCTCGTCCATGAACC...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAAAATCTGCCCTCAGATaGCACAAGCTTTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVKSALR*HKLLEL
Trigger: AAGCTCCAAAAGCTTGTGTCATCTGAGGGCAGATTT...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCATCTTGGAGAAGTTaGCCAGGCCGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSSWRS*PGRLPC
Trigger: ACACGGAAGACGGCCTGGTCAACTTCTCCAAGATGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTACATGGGCACCTGAATaGGGGAACCTTGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGTWAPE*GNLVSQ
Trigger: TTGTGAGACAAGGTTCCCTCATTCAGGTGCCCATGT...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCGTGGCTTGGTGTTTGTaGCTCCATTTCCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIVAWCL*LHFLGK
Trigger: CTTCCCGAGGAAATGGAGTCACAAACACCAAGCCAC...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGACATGGCCGAGTACATaGTGGTGTAGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLTWPST*WCSHWS
Trigger: ACTCCAATGGCTACACCAGCATGTACTCGGCCATGT...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCTCCTTGTTTGGGGTaGCCTCGTTGGCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYSPCLG*PRWPRR
Trigger: CCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAACGCCTTCAGCCATCTaGGTGATCTCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLTPSAI*VISSSV
Trigger: CACGCTGGAGGAGATCACGCAGATGGCTGAAGGCGT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGTCTAGCAGGGTCAGCTaGTCCGCGATCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQSSRVS*SAISRA
Trigger: AGCCCTGGAGATCGCGGAGCAGCTGACCCTGCTAGA...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGTTTGAGCCGGAAGATTaGACTGCGGTTCATGGACGA +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLFEPED*TAVHGR
Trigger: TCGTCCATGAACCGCAGTGCAATCTTCCGGCTCAAA...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTCAGTGGGCCAGGATCTaGAGGCTGTACTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPQWARI*RLYWWL
Trigger: CAACCACCAGTACAGCCTGCAGATCCTGGCCCACTG...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACTCACTTACTTCATCGTaGATTATTCTGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDSLTSS*IILDSS
Trigger: GGAGCTGTCCAGAATAATGCACGATGAAGTAAGTGA...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGAACTTGGCCTACTGCTaGACAGCCTTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQNLAYC*TALAKS
Trigger: GGACTTGGCCAAGGCTGTCCAGCAGTAGGCCAAGTT...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAAGGAGAACTTGCGGGTaGCGCGCGGGGACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGRRTCG*RAGTWG
Trigger: CCCCCAAGTCCCCGCGCGCCACCCGCAAGTTCTCCT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGGTGATGGACAGAGGTaGCGGCGAGGAGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQGDGQR*RRGELA
Trigger: CGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTTGGGGTGCCCTCGTTaGCCCCGGCGGTTGCTATGG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQLGCPR*PRRLLW
Trigger: CCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAA...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAGGGGAAACCCTGCACTaGCTAAGGACATCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLGETLH*LRTSSG
Trigger: ACCGGAGGATGTCCTTAGCCAGTGCAGGGTTTCCCC...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTAGTCCTGAGAGTGCTTaGACACCCAGTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPSPESA*TPSGGA
Trigger: TGCTCCGCCACTGGGTGTCCAAGCACTCTCAGGACT...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTCTCCAGCGGCTCCTTaGCCGACAGCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVSPAAP*PTAPAW
Trigger: CCAAGCCGGCGCTGTCGGCCAAGGAGCCGCTGGAGA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCAGCGTGGGCCAGCTaGAGATGCGGGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVPAWAS*RCGPSG
Trigger: GCCTGAAGGCCCGCATCTCCAGCTGGCCCACGCTGG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATATCTGCAGGCTGTACTaGTGGTTGCGGACGAACTCT +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNICRLY*WLRTNS
Trigger: AGAGTTCGTCCGCAACCACCAGTACAGCCTGCAGAT...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGCAGCCGCTCCACACTaGCGTAGCGGATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRAAAPH*RSGSAA
Trigger: TGCTGCAGATCCGCTACGCCAGTGTGGAGCGGCTGC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATGCAGCCGCTCCACACTaGCGTAGCGGATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDAAAPH*RSGSAA
Trigger: TGCTGCAGATCCGCTACGCCAGTGTGGAGCGGCTGC...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGTTACTGGGAGACACATaGGGAGTTTTGAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLLLGDT*GVLRPA
Trigger: CGCAGGTCTCAAAACTCCCCATGTGTCTCCCAGTAA...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGAGCAAGGAGCGACGTaGGGCCTGAACGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQEQGAT*GLNEMA
Trigger: TGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 72 bp CTGGGAGACACATGGGGAGTTTTGAGACCTGCGATTTaGGCTGGAGAAGCTGCTTTGGAAATTGACATCACC +
Preference number: 4 (lower is better)
Translates to: LGDTWGVLRPAI*AGEAALEIDIT
Trigger: GGTGATGTCAATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGACATTGGAGTTGCAGCTaGGGGCGGCCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGHWSCS*GRPGPG
Trigger: CCCTGGACCTGGCCGCCCTCAGCTGCAACTCCAATG...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCGCTCAACGTGCTCATaGGGCGTGTGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRSTCS*GVWARS
Trigger: GCTCCTGGCCCACACGCCTCATGAGCACGTTGAGCG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCACATGGGCACCTGAATaGGGGAACCTTGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAITWAPE*GNLVSQ
Trigger: TTGTGAGACAAGGTTCCCTCATTCAGGTGCCCATGT...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATCAGACATGGGCACCTaGATGAGGGAACCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKSDMGT*MREPCL
Trigger: GAGACAAGGTTCCCTCATTCAGGTGCCCATGTCTGA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCAGTTCATGGTTTTGCTaGAGCGAATGTCAACATCAT +
Preference number: 4 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPSSWFC*SECQHH
Trigger: ATGATGTTGACATTCGCTTCAGCAAAACCATGAACT...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCGTGACTGAAACTTCATaGGAGACTCCAAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPVTETS*ETPNKN
Trigger: GTTCTTATTTGGAGTCTCTCATGAAGTTTCAGTCAC...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGACATGGCCGAGTACATaGTGGTGTAGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLTWPST*WCSHWS
Trigger: ACTCCAATGGCTACACCAGCATGTACTCGGCCATGT...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTCTCCTTGTTTGGGGTaGCCTCGTTGGCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVSPCLG*PRWPRR
Trigger: CCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGGAGCTCCGGGTCGTaGATGACTTCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLRSSGS*MTSSRK
Trigger: CTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGATATTGCGTTACCTTTaGTTGGTGCTCTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEILRYL*LVLYFV
Trigger: TACAAAATAGAGCACCAAGCAAAGGTAACGCAATAT...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGGTAGCCTTTGCGCGTaGCGTCCTTGCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVGSLCA*RPCAPA
Trigger: TGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGGGCATGTGCAATGGCTaGCACCCATTCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQGMCNG*HPFVTI
Trigger: GATTGTGACGAATGGGTGGCAGCCATTGCACATGCC...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGAACATGCTGGGAGGATaGCTGGGTGGCCACCTCAAC +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQNMLGG*LGGHLN
Trigger: GTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTT...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGCCGACTTTCAGTGGATaGTGGGCCAGTGGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQPTFSG*WASGRQ
Trigger: TTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGG...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCATACCACTAGGTATTaGTTACAGCAAAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGHTTRY*LQQKLS
Trigger: AGACAACTTTTGCTGTAAGCAATACCTAGTGGTATG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATGAGTGGGTTGTGCCTTaGAGTGGGCCCCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHEWVVP*SGPHAC
Trigger: ACAGGCATGGGGCCCACTGCAAGGCACAACCCACTC...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTGGGATCTGGGTAGGTaGCCTCTCGGAAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGWDLGR*PLGKDN
Trigger: ATTATCTTTTCCGAGAGGCCACCTACCCAGATCCCA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTGGCGCGCGGGGACTTaGGGGGTTCACCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVWRAGT*GVHRTG
Trigger: TCCTGTACGGTGAACCCCCCAAGTCCCCGCGCGCCA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGTGGCCGAGTACATGCTaGTGTAGCCATTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQWPSTC*CSHWSC
Trigger: GCAACTCCAATGGCTACACCAGCATGTACTCGGCCA...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATTGTCTCCATTCCTCTaGTCTGGGGGAAACCCTGCA +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKLSPFL*SGGNPA
Trigger: TGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTGCTTTCTGGTTCTCATaGCTGAAGTTCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGAFWFS*LKFTVK
Trigger: CTTCACGGTGAACTTCAGCCATGAGAACCAGAAAGC...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGGGAGGATGCCTGGGTaGCCACCTCAACCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVGRMPG*PPQPRS
Trigger: GCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGAGATTTGTCAATGACTaGACTTCAGGGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRRFVND*TSGYGF
Trigger: GAAACCATACCCTGAAGTCCAGTCATTGACAAATCT...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGACCTGCGATTTTGGCTaGAGAAGCTGCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWTCDFG*RSCFGN
Trigger: ATTTCCAAAGCAGCTTCTCCAGCCAAAATCGCAGGT...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGTTCCCGACTTTCAGTaGATGCTGGGCCAGTGGTCG +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQVPDFQ*MLGQWS
Trigger: CGACCACTGGCCCAGCATCCACTGAAAGTCGGGAAC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACGCAATCAAAATCAGCTaGCAGTCAAAAGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDAIKIS*QSKEGS
Trigger: AGATCCTTCTTTTGACTGCCAGCTGATTTTGATTGC...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTGGGAATCTGATCATTaGGGTTTCAGAAGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGWESDH*GFRSSG
Trigger: CCCTGAACTTCTGAAACCTCAATGATCAGATTCCCA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCCGCCGGCGGCTCGGTaGCGATGTCTTGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSPPAAR*RCLGDG
Trigger: TCCATCACCAAGACATCGTCACCGAGCCGCCGGCGG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATCCAGCGTGGCCTTGCTaGAGGGTGACATGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYPAWPC*RVTWPS
Trigger: ACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGG...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTATGGAGATTTAGTTGGTaGTGTTTCAGTATCACCATC +
Preference number: 4 (lower is better)
Translates to: LILEQGATWGLNEMAALVWRFSW*CFSITI
Trigger: GATGGTGATACTGAAACATCACCAACTAAATCTCCA...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTTTGGTCTCAAAGTCCTaGGAGTGCTTGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPLVSKS*ECLDTQ
Trigger: CTGGGTGTCCAAGCACTCTCAGGACTTTGAGACCAA...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCGATCACCTTGCATTTaGGCTCATCGTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLRSPCI*AHRWSQ
Trigger: TTGAGACCAACGATGAGCTCAAATGCAAGGTGATCG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATCGCGATCTCCAGGGCTaGGTGGTTTTCAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHRDLQG*VVFKGL
Trigger: GAGCCCTTTGAAAACCACTCAGCCCTGGAGATCGCG...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCATAAGGAATCTTCTTaGAGACGAGGTGATCTAGCA +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWHKESS*RRGDLA
Trigger: TGCTAGATCACCTCGTCTTCAAGAAGATTCCTTATG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGAAATCTGCCCTCAGATaGCACAAGCTTTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLKSALR*HKLLEL
Trigger: AAGCTCCAAAAGCTTGTGTCATCTGAGGGCAGATTT...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCAAATGCGTTCATCATaGGCCCATTGCATCGGATGT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIQMRSS*AHCIGC
Trigger: ACATCCGATGCAATGGGCTCATGATGAACGCATTTG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGGAAGATTTGTCAATaGCTGGACTTCAGGGTATGG +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLGKICQ*LDFRVW
Trigger: CCATACCCTGAAGTCCAGTCATTGACAAATCTTCCC...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGTCCCAGTTGCTGAGTaGCTGAAACTTCATGAGAGA +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLVPVAE*LKLHER
Trigger: TCTCTCATGAAGTTTCAGTCACTCAGCAACTGGGAC...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATGTGTGGATGCTCCCATaGACAGCCCCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYVWMLP*TAPVQP
Trigger: GGGCTGCACTGGGGCTGTTCATGGGAGCATCCACAC...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATCTTGTAGCTTCTGCCTaGGGCTGCTGGAACAGTCGC +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDLVASA*GCWNSR
Trigger: GCGACTGTTCCAGCAGCCTCAGGCAGAAGCTACAAG...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCCAGCCTCTTTGTTCTaGAGGGCACTGCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRPASLF*RALLLG
Trigger: TCCCAGCAGCAGTGCCCTGCAGAACAAAGAGGCTGG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGAGACTTCTGAGCTCTaGTTGCTGAGCGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQETSEL*LLSAEG
Trigger: CCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGTCTC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGTTGGCCCCGGCGGTTaGTATGGCAAAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTVGPGG*YGKGRG
Trigger: GCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAAC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATTCTCCTTGTTTGGGGTaGCCTCGTTGGCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYSPCLG*PRWPRR
Trigger: CCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGA...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGGAGTGGGTTGTGCCTTaGAGTGGGCCCCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQEWVVP*SGPHAC
Trigger: ACAGGCATGGGGCCCACTGCAAGGCACAACCCACTC...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTGGGCTGTCCACAACTaGGATCTGGGTAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDWAVHN*DLGRWP
Trigger: AGGCCACCTACCCAGATCCCAGTTGTGGACAGCCCA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATGGCGCGCGGGGACTTaGGGGGTTCACCGTACAGGA +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAWRAGT*GVHRTG
Trigger: TCCTGTACGGTGAACCCCCCAAGTCCCCGCGCGCCA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGACTCCTCTCTCATaGAGACTTCTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQLTPLS*RLLSSA
Trigger: AGCAGAGCTCAGAAGTCTCCATGAGAGAGGAGTCAG...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGTCCATTCCTCTGGTCTaGGGGAAACCCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRSIPLV*GKPCTG
Trigger: GCCAGTGCAGGGTTTCCCCCAGACCAGAGGAATGGA...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGGAGGGGAGGGATGGGTaGGCGAAGTCTGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQEGRDG*AKSETV
Trigger: CACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATGCAGCGCGAACCACTTaGTTTGCCATTTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNAARTT*FAILCC
Trigger: ACAACACAAAATGGCAAACCAAGTGGTTCGCGCTGC...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAACAGTCTGGGTGGACTaGATGCGCTCATTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLTVWVD*MRSLSL
Trigger: CAAGGACAATGAGCGCATCCAGTCCACCCAGACTGT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCCTCGCAGTCAGGCTTaGCCTCGTAGTGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRPRSQA*PRSASA
Trigger: TGCTGAAGCACTACGAGGCCAAGCCTGACTGCGAGG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGTTATAACAACTACATaGAACATGCTGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWVITTT*NMLGGC
Trigger: GCATCCTCCCAGCATGTTCCATGTAGTTGTTATAAC...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCATTATGTTTTGGAGTaGCTTGTTCTTGGTGCAATA +
Preference number: 4 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWHYVLE*LVLGAI
Trigger: TATTGCACCAAGAACAAGCCACTCCAAAACATAATG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGATAAGAACTGACAGCTaGACCCAGTCAACCCATAGA +
Preference number: 4 (lower is better)
Translates to: KRICTVSSSTCPREQLGLIRTDS*TQSTHR
Trigger: TCTATGGGTTGACTGGGTCCAGCTGTCAGTTCTTAT...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCACTCAGAGAGCCTCTaGGCCTCTGAGGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVHSESL*ASEGWD
Trigger: ATCCCAGCCCTCAGAGGCTCAGAGGCTCTCTGAGTG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTTGGGGGAGGAATGGTaGGGTTCCTGGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSLGEEW*GSWGAL
Trigger: CAGGGCTCCCCAGGAACCTCACCATTCCTCCCCCAA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGGGCCTTGCTGAAGGGTaGCATGGCCGAGTACATGCT +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQGLAEG*HGRVHA
Trigger: AGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCC...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATCTGCTTGCTGAGCGCTaGAGGGTCTTCGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYLLAER*RVFGLL
Trigger: GAGAAGCCCGAAGACCCTTCAGCGCTCAGCAAGCAG...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTGTTTTGATCAATATCTaGCTCCTCTCTCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGVLINI*LLSHGD
Trigger: GTCTCCATGAGAGAGGAGTCAGATATTGATCAAAAC...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGCTCCGGGTCGTGCATaGCTTCTTCCAGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGAPGRA*LLPGSR
Trigger: TCGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGC...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGCTCCGGGTCGTGCATaGCTTCTTCCAGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVAPGRA*LLPGSR
Trigger: TCGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGTTCTTGAAGACGAGGTaGTCTAGCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQFLKTR*SSRVSC
Trigger: GCAGCTGACCCTGCTAGATCACCTCGTCTTCAAGAA...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWWRSTY*RRKSSE
Trigger: TTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCA...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATGGAACATGGGGTAGGTaGGGAAGGTCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYGTWGR*GRSPAS
Trigger: GGACGCTGGAGACCTTCCTCACCTACCCCATGTTCC...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTCTCACAGCCTTCGATaGTCATGCGCTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDSHSLR*SCARWP
Trigger: TGGCCATCGAGCGCATGATCATCGAAGGCTGTGAGA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGAGCGACGTGGGGCCTaGACGAGATGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAERRGA*TRWQHW
Trigger: CCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGTGTGGATGCTCCCATaGACAGCCCCAGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAVWMLP*TAPVQP
Trigger: GGGCTGCACTGGGGCTGTTCATGGGAGCATCCACAC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGCTTGTAGCTTCTGCCTaGGGCTGCTGGAACAGTCGC +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQLVASA*GCWNSR
Trigger: GCGACTGTTCCAGCAGCCTCAGGCAGAAGCTACAAG...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATAGGAAGGACACTGTCTaGTGGGCCCCTGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDRKDTV*WAPGND
Trigger: ATCATTCCCAGGGGCCCAGCAGACAGTGTCCTTCCT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTCCCCTTCTGCATGGTaGTCAGAGGCCAGCGAGACC +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTSPSAW*SEASET
Trigger: GGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAAGCCGGATCCCCTTCTaGATGGTGCTCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGSRIPF*MVLRGQ
Trigger: CTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGTGCATTAATGCCTCATaGTCTGTGGCGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQCINAS*SVARVL
Trigger: CAGGACCCTCGCCACAGAGCATGAGGCATTAATGCA...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCATCCTCGATCTGCTaGCGAAGCTGCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVPSSIC*RSCLAT
Trigger: CGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATACACATAGAGCTTGCTaGTGTCCAGCGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDTHRAC*CPAWPC
Trigger: GCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGAGTCCTGAGAGTGCTTaGACACCCAGTGGCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQSPESA*TPSGGA
Trigger: TGCTCCGCCACTGGGTGTCCAAGCACTCTCAGGACT...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCAGGTGGGGAGTTTTaGTTCTATTCGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSGGEF*FYSERR
Trigger: TCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGGATCCCCTTCTGCATaGTGCTCAGAGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTGSPSA*CSEASE
Trigger: CTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTTGGGGGCGACAGTCTaGGTGGACTGGATGCGCTCA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVLGATV*VDWMRS
Trigger: TGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCATCGTGCATTATTCTaGACAGCTCCTCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYHRALF*TAPPVW
Trigger: CCAAACTGGAGGAGCTGTCCAGAATAATGCACGATG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATCTTGGCCGGATCCTTTaGCTTCCTCCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDLGRIL*LPPPCF
Trigger: AAAGCACGGAGGAGGAAGCCAAAGGATCCGGCCAAG...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTGCTGGGAGGATGCCTaGGTGGCCACCTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYCWEDA*VATSTQ
Trigger: CTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTGGATGCTGGGCCAGTaGTCGGCAAGAGTCGACGTG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVWMLGQ*SARVDV
Trigger: CACGTCGACTCTTGCCGACCACTGGCCCAGCATCCA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCGGCCTTGGGAGCTCTaGAGTGGGTTGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRPWEL*SGLCLA
Trigger: TGCAAGGCACAACCCACTCCAGAGCTCCCAAGGCCG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCAGTTATGGAGCCAGCTaGCTGCAGGTCCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVSYGAS*LQVPGE
Trigger: CTCCCCTGGGACCTGCAGCCAGCTGGCTCCATAACT...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATCCTGGGGAGCCAGTGTaGTTCAGGAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYPGEPV*FRSSAP
Trigger: TGGAGCAGAGCTCCTGAATCACACTGGCTCCCCAGG...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCAGCGACCATCCTCATaGCAGGGTTCCACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYQRPSS*QGSTSG
Trigger: GCCTGAGGTGGAACCCTGTCATGAGGATGGTCGCTG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGTGACGATGTCTTGGTaGTGGACAGAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSVTMSW*WTEVAA
Trigger: CGCCGCCACCTCTGTCCATCACCAAGACATCGTCAC...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGTGACGATGTCTTGGTaGTGGACAGAGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAVTMSW*WTEVAA
Trigger: CGCCGCCACCTCTGTCCATCACCAAGACATCGTCAC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTACTGGAATCTTGTTGGTaGAGCTGCTGGACACATAGA +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLLESCW*SCWTHR
Trigger: TCTATGTGTCCAGCAGCTTCACCAACAAGATTCCAG...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCTGAGCTCTGCTTGCTaGGCGCTGAAGGGTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYLSSAC*ALKGLR
Trigger: CCGAAGACCCTTCAGCGCTCAGCAAGCAGAGCTCAG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTCATCACTCTGGTTTTaGTCAATATCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGSSLWF*SISDSS
Trigger: AGAGGAGTCAGATATTGATCAAAACCAGAGTGATGA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTACGATCACCTTGCATTTaGGCTCATCGTTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLRSPCI*AHRWSQ
Trigger: TTGAGACCAACGATGAGCTCAAATGCAAGGTGATCG...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTCATCTTGGAGAAGTTaGCCAGGCCGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDSSWRS*PGRLPC
Trigger: ACACGGAAGACGGCCTGGTCAACTTCTCCAAGATGA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTCTGATGTAAAAACATaGTGGTTTCGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TKRICTVSSSTCPREQLGSDVKT*WFRCSG
Trigger: TCCTGAACAGCGAAACCATCATGTTTTTACATCAGA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGGAACATGGGGTAGGTaGGGAAGGTCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAGTWGR*GRSPAS
Trigger: GGACGCTGGAGACCTTCCTCACCTACCCCATGTTCC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATCCATTCTTGGTCAAGTaGAGCTTCCCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHPFLVK*SFPPEP
Trigger: AGGCTCTGGAGGGAAGCTTCACTTGACCAAGAATGG...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGTCATCTGCGGCACAGTaGCCTTGGAATTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQSSAAQ*PWNFLQ
Trigger: TTGAAGAAAATTCCAAGGTCACTGTGCCGCAGATGA...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGTGGCTTGGTGTTTGTaGCTCCATTTCCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRVAWCL*LHFLGK
Trigger: CTTCCCGAGGAAATGGAGTCACAAACACCAAGCCAC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCTGAACTTGGCCTACTaGTGGACAGCCTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYLNLAY*WTALAK
Trigger: CTTGGCCAAGGCTGTCCAGCAGTAGGCCAAGTTCAG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTGGTCCAGTAAATATTaGGTTACCTTTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIWSSKY*VTFAWC
Trigger: GCACCAAGCAAAGGTAACGCAATATTTACTGGACCA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCGAAGTCTGAAACGGTaGAGAAATTCATATTCCGGT +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNRSLKR*RNSYSG
Trigger: ACCGGAATATGAATTTCTGCACCGTTTCAGACTTCG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATAGCCGGATCCCCTTCTaGATGGTGCTCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYSRIPF*MVLRGQ
Trigger: CTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCT...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTGCATTAATGCCTCATaGTCTGTGGCGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDCINAS*SVARVL
Trigger: CAGGACCCTCGCCACAGAGCATGAGGCATTAATGCA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCACGATCTGCAGCAGGTaGAGGTATTTCTGCATTAAT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAITICSR*RYFCIN
Trigger: ATTAATGCAGAAATACCTGCACCTGCTGCAGATCGT...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCAGGATGTGCAGCTGCTaGACGTACTCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRMCSC*TYSASA
Trigger: GGCTGAGGCTGAGTACGTGCAGCAGCTGCACATCCT...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATACAAGGATGTGCAGCTaGTGCACGTACTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDTRMCS*CTYSAS
Trigger: TGAGGCTGAGTACGTGCAGCAGCTGCACATCCTTGT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGGACCTGCTCATTTCTaGTTCCCTGGTCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTGPAHF*FPGPLP
Trigger: AGGGAGGGGACCAGGGAAGCAGAAATGAGCAGGTCC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419573.7
CDS-3UTR GCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTGGATCTGCAGCACTTTaGAGGAGTTCATGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPGSAAL*RSSWFC
Trigger: GCAAAACCATGAACTCCTGCAAAGTGCTGCAGATCC...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGAAAAGAAACAGGCACTaGAGGAGACGAGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRKRNRH*RRRGEG
Trigger: TCCCTCCCCTCGTCTCCTGCAGTGCCTGTTTCTTTT...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTCTAAGATTCTTGTATaGAAGGGTGCTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAISKILV*KGAVSP
Trigger: AGGGGAAACAGCACCCTTGCATACAAGAATCTTAGA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATCAACTACATGGAACATaGTGGGAGGATGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDQLHGT*WEDAWV
Trigger: CACCCAGGCATCCTCCCAGCATGTTCCATGTAGTTG...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCTCTGGAGTGGGTTGTaGCTTGCAGTGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYLWSGL*LAVGPM
Trigger: CATGGGGCCCACTGCAAGGCACAACCCACTCCAGAG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGGTGATGGACAGAGGTaGCGGCGAGGAGAACTTGCG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAGDGQR*RRGELA
Trigger: CGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGTACTTCTCCTTGTTTaGGGTGCCCTCGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTVLLLV*GALVGP
Trigger: GGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTAC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTGCTTGGACACCCAGTaGCGGAGCACGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQCLDTQ*RSTFKT
Trigger: TGTCTTGAACGTGCTCCGCCACTGGGTGTCCAAGCA...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGATCTCTCGGATAATATaGGATATCATCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWISRII*DIILIL
Trigger: CAAGATGAGGATGATATCCCATATTATCCGAGAGAT...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGTCAGGTGGGGAGTTTTaGTTCTATTCGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQSGGEF*FYSERR
Trigger: TCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGA...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGAGGGGAGGGATGGGTaGGCGAAGTCTGAAACGGTG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAEGRDG*AKSETV
Trigger: CACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGCTGCCGAAGCTGCTTaGCCACGGTCTTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVAAEAA*PRSSLS
Trigger: AGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATCGCTGTCTTCATCGTTaGGGGCGACAGTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYRCLHR*GRQSGW
Trigger: CCACCCAGACTGTCGCCCCCAACGATGAAGACAGCG...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATGTTATAACAACTACATaGAACATGCTGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNVITTT*NMLGGC
Trigger: GCATCCTCCCAGCATGTTCCATGTAGTTGTTATAAC...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACATAAGAACTGACAGCTaGACCCAGTCAACCCATAGA +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYIRTDS*TQSTHR
Trigger: TCTATGGGTTGACTGGGTCCAGCTGTCAGTTCTTAT...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 72 bp GGGCTGGGTAAGGAGCAAGTGCTCATCAAATATTCCTaGACTGAACGAATGAAACCCATCAAAACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLGKEQVLIKYS*TERMKPIKTRC
Trigger: ACAGCGAGTTTTGATGGGTTTCATTCGTTCAGTCAAGGAATATTTGATGAGCACTTGCTCCTTACCCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGCTGAGAGCTGGCTCTaGACCAGCCTCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTAESWL*TSLFVL
Trigger: CAGAACAAAGAGGCTGGTTCAGAGCCAGCTCTCAGC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGATCTCATGGAGACTTCTaGGCTCTGCTTGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGSHGDF*ALLAER
Trigger: GCGCTCAGCAAGCAGAGCTCAGAAGTCTCCATGAGA...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCATGGAGACTTCTaGGCTCTGCTTGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYSHGDF*ALLAER
Trigger: GCGCTCAGCAAGCAGAGCTCAGAAGTCTCCATGAGA...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SERLSDLAELMKQVKLAIWRSTY*RRKSSE
Trigger: TTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGGATGTAGTCCTGGATaGTGGTCTTCCACTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVGCSPG*WSSTSA
Trigger: GGCGGAAGTGGAAGACCATCATCCAGGACTACATCC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGATATCCACACACTGGCTaGTGTCACTGGTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGYPHTG*CHWSTL
Trigger: CAGCGTGGACCAGTGACATCAGCCAGTGTGTGGATA...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATTCTGGGTCGTTGCGTTaGTCTGGCAGCAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHSGSLR*SGSRGV
Trigger: CACACCTCTGCTGCCAGAGCAACGCAACGACCCAGA...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTGTATTCTGGGTCGTTaGGTTGCTCTGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQCILGR*VALAAE
Trigger: CTCTGCTGCCAGAGCAACGCAACGACCCAGAATACA...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTGGACACATAGAGCTTaGTGGTGTCCAGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTWTHRA*WCPAWP
Trigger: AGGCCACGCTGGACACCAGCAAGCTCTATGTGTCCA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCGGCCGACAAGGCACTaGGGTTATTGTCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRPTRH*GYCPVH
Trigger: GTGAACTGGACAATAACCGCAGTGCCTTGTCGGCCG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATGATTGGTGGCTGCTCTaGGGATCACAAACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHDWWLL*GSQTPC
Trigger: ACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATC...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAAGGAGCTCCGGGTCGTaGATGACTTCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGRSSGS*MTSSRK
Trigger: CTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCGAAGTCTGAAACGGTaGAGAAATTCATATTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYRSLKR*RNSYSG
Trigger: ACCGGAATATGAATTTCTGCACCGTTTCAGACTTCG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATGTCCGAACTCCGCTTaGTCAGGTAGCCTTTGCGCG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLACPNSA*SGSLCA
Trigger: CGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGTCCGAACTCCGCTTaGTCAGGTAGCCTTTGCGCG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSCPNSA*SGSLCA
Trigger: CGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCTGTAGCTGGCATGTaGAATGGCTGCCACCCATTC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVPVAGM*NGCHPF
Trigger: GAATGGGTGGCAGCCATTGCACATGCCAGCTACAGG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCAGGGATGTGATCTCTaGCTTCAGCCGCTCGATCTC +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTQGCDL*LQPLDL
Trigger: GAGATCGAGCGGCTGAAGGCAGAGATCACATCCCTG...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATCGTAGTCCAGGCTGTTaGGCTCAACGTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYRSPGC*AQRAHE
Trigger: CTCATGAGCACGTTGAGCGCAACAGCCTGGACTACG...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATCACTTACTTCATCGTaGATTATTCTGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKSLTSS*IILDSS
Trigger: GGAGCTGTCCAGAATAATGCACGATGAAGTAAGTGA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATAGGAGGCGTCGGACCTaGTCATTTCTGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHRRRRT*SFLLPW
Trigger: CCAGGGAAGCAGAAATGAGCAGGTCCGACGCCTCCT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419573.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCAGCCTTGTAGCTTCTaGCTGAGGCTGCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVQPCSF*LRLLEQ
Trigger: CTGTTCCAGCAGCCTCAGGCAGAAGCTACAAGGCTG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAACACATAGAGCTTGCTaGTGTCCAGCGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGTHRAC*CPAWPC
Trigger: GCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGGGGAAACCCTGCACTaGCTAAGGACATCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHGETLH*LRTSSG
Trigger: ACCGGAGGATGTCCTTAGCCAGTGCAGGGTTTCCCC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTCCATTCCTCTGGTCTaGGGGAAACCCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSSIPLV*GKPCTG
Trigger: GCCAGTGCAGGGTTTCCCCCAGACCAGAGGAATGGA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCGTTCAAGACACGATTaGTGGCTGCTCTGCGGATCA +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYRSRHD*WLLCGS
Trigger: TGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTGCTTGGACACCCAGTaGCGGAGCACGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTCLDTQ*RSTFKT
Trigger: TGTCTTGAACGTGCTCCGCCACTGGGTGTCCAAGCA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTCACCTGGGTCCTCCTaGGTCAGAGTCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTSPGSS*VRVLMM
Trigger: CATCATCAGGACTCTGACCCAGGAGGACCCAGGTGA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHSSSVI*LSPGSS
Trigger: GGAGGACCCAGGTGACAACCAGATCACGCTGGAGGA...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTATACCATTCCCCGCTaGAACCTCTTCTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVYTIPR*NLFSAP
Trigger: CGGAGCGGAGAAGAGGTTCCAGCGGGGAATGGTATA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAAGCTGGCATGTGCAATaGCTGCCACCCATTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGSWHVQ*LPPIRH
Trigger: GTGACGAATGGGTGGCAGCCATTGCACATGCCAGCT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTATGCCTCATGCTCTGTaGCGAGGGTCCTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSMPHAL*RGSCSW
Trigger: CCAGCTACAGGACCCTCGCCACAGAGCATGAGGCAT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGATGTTATCCACACACTaGCTGATGTCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQMLSTH*LMSLVH
Trigger: GTGGACCAGTGACATCAGCCAGTGTGTGGATAACAT...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCTACATGGAACATGCTaGGAGGATGCCTGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSLHGTC*EDAWVA
Trigger: GGCCACCCAGGCATCCTCCCAGCATGTTCCATGTAG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 72 bp ATTTCCTCGGGAAGTCTAGGGCCTCATCCAGTTGTATaGAGACTGCTATTCATGCTATCTGGTGTTAATCCT +
Preference number: 4 (lower is better)
Translates to: ISSGSLGPHPVV*RLLFMLSGVNP
Trigger: AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCCTAGACTTCCCGAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGCCCCATGACTTTTaGGAAGCAAAGGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDLPHDF*EAKAKV
Trigger: CACCTTAGCCTTTGCTTCTCAAAAGTCATGGGGCAA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGTGGAGATTTAGTTGGTaGTGTTTCAGTATCACCATC +
Preference number: 4 (lower is better)
Translates to: SETKRICTVSSSTCPREQWRFSW*CFSITI
Trigger: GATGGTGATACTGAAACATCACCAACTAAATCTCCA...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTATGTCCTCATTGCGGATaGTTTCTGAAGCAATCAAGT +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLCPHCG*FLKQSS
Trigger: ACTTGATTGCTTCAGAAATCATCCGCAATGAGGACA...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGGTTCATGGACGAGGTaGTCTCCAGTACGGCATTGT +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTGSWTR*SPVRHC
Trigger: ACAATGCCGTACTGGAGATCACCTCGTCCATGAACC...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATGGATGTAGTCCTGGATaGTGGTCTTCCACTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYGCSPG*WSSTSA
Trigger: GGCGGAAGTGGAAGACCATCATCCAGGACTACATCC...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGGCGCAGGAAATTGTTaGCAAGGATGTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVGAGNC*QGCAAA
Trigger: AGCAGCTGCACATCCTTGTCAACAATTTCCTGCGCC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATATCCACACACTGGCTaGTGTCACTGGTCCACGCTG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAYPHTG*CHWSTL
Trigger: CAGCGTGGACCAGTGACATCAGCCAGTGTGTGGATA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCCAAATAAGAACTaGCAGCTGGACCCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHTPNKN*QLDPVN
Trigger: GTTGACTGGGTCCAGCTGTCAGTTCTTATTTGGAGT...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGGCCAAGTCCTTCATTaGCCCATGACTTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRGQVLH*PMTFEK
Trigger: CTTCTCAAAAGTCATGGGGCAATGAAGGACTTGGCC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATGTTCTGCAGGGCACTaGTGCTGGGAAAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLACSAGH*CWERKD
Trigger: GTCCTTCCTTTCCCAGCAGCAGTGCCCTGCAGAACA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACTCATCGAGGCTGTCTaGTCCACGTTGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLALIEAV*STLHTG
Trigger: TCCTGTGTGCAACGTGGAGCAGACAGCCTCGATGAG...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTAGGAGCTCCGGGTCGTaGATGACTTCTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSRSSGS*MTSSRK
Trigger: CTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTATCTGCTGCCGAAGCTaGTTGGCCACGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSICCRS*LATVFS
Trigger: AGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGAT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCCCCGCAGGAAGCTCTaGACCTTCTTAATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRPRRKL*TFLIFL
Trigger: CAAGAAAATTAAGAAGGTGCAGAGCTTCCTGCGGGG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTCGAAGTCACGGTTCTaGTTGCAGTGGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYSKSRF*LQWARI
Trigger: GATCCTGGCCCACTGCAAGCAGAACCGTGACTTCGA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATCGTAGTCCAGGCTGTTaGGCTCAACGTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHRSPGC*AQRAHE
Trigger: CTCATGAGCACGTTGAGCGCAACAGCCTGGACTACG...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAAAAAGAAACAGGCACTaGAGGAGACGAGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGKRNRH*RRRGEG
Trigger: TCCCTCCCCTCGTCTCCTGCAGTGCCTGTTTCTTTT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTAAGGACACTGTCTGCTaGGCCCCTGGGAATGATCTC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSKDTVC*APGNDL
Trigger: GAGATCATTCCCAGGGGCCCAGCAGACAGTGTCCTT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTGGCCGAGTACATGCTaGTGTAGCCATTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYWPSTC*CSHWSC
Trigger: GCAACTCCAATGGCTACACCAGCATGTACTCGGCCA...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATCGTATCGCCCTCATCTaGAATCTTGTTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHRIALI*NLVGEA
Trigger: AGCTTCACCAACAAGATTCCAGATGAGGGCGATACG...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTTGTCTCCATTCCTCTaGTCTGGGGGAAACCCTGCA +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTLSPFL*SGGNPA
Trigger: TGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATGATGACACAAGCTTTTaGAGCTTATCAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNDDTSF*SLSIKA
Trigger: AGCTTTGATTGATAAGCTCCAAAAGCTTGTGTCATC...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCATCTGCAGGCTGTACTaGTGGTTGCGGACGAACTCT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVICRLY*WLRTNS
Trigger: AGAGTTCGTCCGCAACCACCAGTACAGCCTGCAGAT...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGATCACAAAGGTCTGGCTaGTGTCCAGGAGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGSQRSG*CPGGSH
Trigger: GTGAGATCCTCCTGGACACCAGCCAGACCTTTGTGA...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCGGCAAGAGTCGACGTaGCTTGGTGTTTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYRQEST*LGVCDS
Trigger: GGAGTCACAAACACCAAGCCACGTCGACTCTTGCCG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATACTTTCAGTGGATGCTaGGCCAGTGGTCGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYTFSGC*ASGRQE
Trigger: CTCTTGCCGACCACTGGCCCAGCATCCACTGAAAGT...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAAGCAATCAAAATCAGCTaGCAGTCAAAAGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKAIKIS*QSKEGS
Trigger: AGATCCTTCTTTTGACTGCCAGCTGATTTTGATTGC...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
3UTR CAA 72 bp AATTCTCATACCACTAGGTATTGCTTACAGCAAAAGTaGTCTGTCTGTTGTAGTGGAGCATGCCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: NSHTTRYCLQQK*SVCCSGACLPL
Trigger: AAGTGGCAGGCATGCTCCACTACAACAGACAGACAACTTTTGCTGTAAGCAATACCTAGTGGTATGAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTATCATCACTCTGGTTTTaGTCAATATCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLSSLWF*SISDSS
Trigger: AGAGGAGTCAGATATTGATCAAAACCAGAGTGATGA...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTTCTTGAAGACGAGGTaGTCTAGCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYFLKTR*SSRVSC
Trigger: GCAGCTGACCCTGCTAGATCACCTCGTCTTCAAGAA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATTTCTTGAAGACGAGGTaGTCTAGCAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHFLKTR*SSRVSC
Trigger: GCAGCTGACCCTGCTAGATCACCTCGTCTTCAAGAA...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATCATCTTGGAGAAGTTaGCCAGGCCGTCTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLASSWRS*PGRLPC
Trigger: ACACGGAAGACGGCCTGGTCAACTTCTCCAAGATGA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYWVGEV*NGAEIH
Trigger: ATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCA...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTGGGTGGGCGAAGTCTaGAACGGTGCAGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTWVGEV*NGAEIH
Trigger: ATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCCATTCTTGGTCAAGTaGAGCTTCCCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSPFLVK*SFPPEP
Trigger: AGGCTCTGGAGGGAAGCTTCACTTGACCAAGAATGG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGTTCATGGTTTTGCTaGAGCGAATGTCAACATCAT +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLSSWFC*SECQHH
Trigger: ATGATGTTGACATTCGCTTCAGCAAAACCATGAACT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATAGTGCAGGAAGGTGTTaGGGAAGTCGATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHSAGRC*GSRCSG
Trigger: TCCTGAGCATCGACTTCCTCAACACCTTCCTGCACT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGCCTGGATGGGATGTTTaGTTCTGTTTTCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQPGWDV*FCFLRA
Trigger: GGCTCTGAGAAAACAGAAGCAAACATCCCATCCAGG...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATTTCCTACAGGATAACTaGAGGAATGTCACAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RFYRNLRTRTICILGEAHFLQDN*RNVTGR
Trigger: CCTACCTGTGACATTCCTGCAGTTATCCTGTAGGAA...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGATTGGTGGCTGCTCTaGGGATCACAAACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGDWWLL*GSQTPC
Trigger: ACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATC...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGACACGATTGGTGGCTaGTCTGCGGATCACAAACTC +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHDTIGG*SADHKL
Trigger: GAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGACACGATTGGTGGCTaGTCTGCGGATCACAAACTC +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYDTIGG*SADHKL
Trigger: GAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGGCATGTGCAATGGCTaGCACCCATTCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAGMCNG*HPFVTI
Trigger: GATTGTGACGAATGGGTGGCAGCCATTGCACATGCC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGTCTCCACGATCTaGAGCAGGTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYSVSTI*SRCRYF
Trigger: GAAATACCTGCACCTGCTGCAGATCGTGGAGACAGA...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTCTTGTATGCAAGGGTaGTGTTTCCCCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQSCMQG*CFPSEK
Trigger: CTTCTCAGAGGGGAAACAGCACCCTTGCATACAAGA...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAACATACCACTAGGTATTaGTTACAGCAAAAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: AELMKQVKLAIKISWQSKHTTRY*LQQKLS
Trigger: AGACAACTTTTGCTGTAAGCAATACCTAGTGGTATG...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCCTTCTTTCTCCGCTTaGTATCCCCCTCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSPSFSA*YPPQIP
Trigger: TGGGATCTGAGGGGGATAGCAAGCGGAGAAAGAAGG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGAAGCAAAGGCTAAGGTaGCCTGCACTCCTTATGTTG +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQKQRLR*PALLML
Trigger: CAACATAAGGAGTGCAGGCCACCTTAGCCTTTGCTT...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCGTATCGCCCTCATCTaGAATCTTGTTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYRIALI*NLVGEA
Trigger: AGCTTCACCAACAAGATTCCAGATGAGGGCGATACG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCAAGACACGATTGGTaGCTGCTCTGCGGATCACAA +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYSRHDW*LLCGSQ
Trigger: TTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGA...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATGGGCTCAGCTTCAGGTaGGGAGTTTTGGTTCTATTC +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYGLSFR*GVLVLF
Trigger: GAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCC...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTCACAAAGGTCTGGCTaGTGTCCAGGAGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSSQRSG*CPGGSH
Trigger: GTGAGATCCTCCTGGACACCAGCCAGACCTTTGTGA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTGTCTCACAAAGGTCTaGCTGGTGTCCAGGAGGATC +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYCLTKV*LVSRRI
Trigger: GATCCTCCTGGACACCAGCCAGACCTTTGTGAGACA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGCTGGAGAAGCTGCTTTaGAAATTGACATCACCATCA +
Preference number: 4 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQLEKLL*KLTSPS
Trigger: TGATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAG...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATACGAGATGGCAGCATTaGTACGAGGGGTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHTRWQH*YEGCGS
Trigger: AGAACCACACCCCTCGTACCAATGCTGCCATCTCGT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTACGAGATGGCAGCATTaGTACGAGGGGTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSTRWQH*YEGCGS
Trigger: AGAACCACACCCCTCGTACCAATGCTGCCATCTCGT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATACGGAAAAGCAGTTATaGAGCCAGCTGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYTEKQL*SQLAAG
Trigger: ACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGT...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCAGAGCCCTGGGAATCTaGTCATTGAGGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRALGI*SLRFQK
Trigger: CTTCTGAAACCTCAATGATCAGATTCCCAGGGCTCT...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACACGACAGGAGGTCATaGCGACTCCATTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAHDRRS*RLHCYR
Trigger: CCTATAACAATGGAGTCGTCATGACCTCCTGTCGTG...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCACGACAGGAGGTCATaGCGACTCCATTGTTATAGG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYHDRRS*RLHCYR
Trigger: CCTATAACAATGGAGTCGTCATGACCTCCTGTCGTG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTATTGCGGATGATTTCTaGAGCAATCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPIADDF*SNQVTD
Trigger: ATCAGTAACTTGATTGCTTCAGAAATCATCCGCAAT...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTGTCCTCATTGCGGATaGTTTCTGAAGCAATCAAGT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDCPHCG*FLKQSS
Trigger: ACTTGATTGCTTCAGAAATCATCCGCAATGAGGACA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAATTTTAAAATCCAAGTaGTCTATGTCTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLILKSK*SMSWPD
Trigger: ATCCGGCCAAGACATAGATCACTTGGATTTTAAAAT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCAAATGCGTTCATCATaGGCCCATTGCATCGGATGT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVQMRSS*AHCIGC
Trigger: ACATCCGATGCAATGGGCTCATGATGAACGCATTTG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTAAAGTAGGGCTAGGATaGAAATGCCTGGAGGAAACG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTKVGLG*KCLEET
Trigger: CGTTTCCTCCAGGCATTTTCATCCTAGCCCTACTTT...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCCCCGCAGGAAGCTCTaGACCTTCTTAATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTPRRKL*TFLIFL
Trigger: CAAGAAAATTAAGAAGGTGCAGAGCTTCCTGCGGGG...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCCACCAAACTGTTGGTaGCTAAAAAGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYPPNCW*LKSRYG
Trigger: ACCATACCTGCTTTTTAGGCACCAACAGTTTGGTGG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGCCACCAAACTGTTGGTaGCTAAAAAGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQPPNCW*LKSRYG
Trigger: ACCATACCTGCTTTTTAGGCACCAACAGTTTGGTGG...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCTAGAGCTGAGGCTCTaGCATAATGTCTTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYLELRL*HNVLPR
Trigger: CCTAGGCAAGACATTATGCCAGAGCCTCAGCTCTAG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTCAAGACACGATTGGTaGCTGCTCTGCGGATCACAA +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSSRHDW*LLCGSQ
Trigger: TTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATCAAGACACGATTGGTaGCTGCTCTGCGGATCACAA +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLASRHDW*LLCGSQ
Trigger: TTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGGGCTCAGCTTCAGGTaGGGAGTTTTGGTTCTATTC +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHGLSFR*GVLVLF
Trigger: GAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCGCAGCGCGAACCACTTaGTTTGCCATTTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVAARTT*FAILCC
Trigger: ACAACACAAAATGGCAAACCAAGTGGTTCGCGCTGC...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATTTCCGTCCAGGTTACTaGGAGACACATGGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHFRPGY*ETHGEF
Trigger: AAACTCCCCATGTGTCTCCCAGTAACCTGGACGGAA...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGTGGAGATTTAGTTGGTaGTGTTTCAGTATCACCATC +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRWRFSW*CFSITI
Trigger: GATGGTGATACTGAAACATCACCAACTAAATCTCCA...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTCATCTGCGGCACAGTaGCCTTGGAATTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FYRNLRTRTICILGEAHTSSAAQ*PWNFLQ
Trigger: TTGAAGAAAATTCCAAGGTCACTGTGCCGCAGATGA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGGGAAGATTTGTCAATaGCTGGACTTCAGGGTATGG +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAGKICQ*LDFRVW
Trigger: CCATACCCTGAAGTCCAGTCATTGACAAATCTTCCC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATACTCCAAATAAGAACTaGCAGCTGGACCCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYTPNKN*QLDPVN
Trigger: GTTGACTGGGTCCAGCTGTCAGTTCTTATTTGGAGT...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCAGTTGCTGAGTGACTaGAACTTCATGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSQLLSD*NFMRDS
Trigger: GGAGTCTCTCATGAAGTTTCAGTCACTCAGCAACTG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATCTGGCATAATGTCTTaGCTAGGGTGTTTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLASGIMS*LGCFGA
Trigger: TGCCCCAAAACACCCTAGGCAAGACATTATGCCAGA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR GCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTCTTGTATGCAAGGGTaGTGTTTCCCCTCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYSCMQG*CFPSEK
Trigger: CTTCTCAGAGGGGAAACAGCACCCTTGCATACAAGA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGTAAGGGACACAGGGTaGGTCACAATTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSVRDTG*VTIFQS
Trigger: GCTCTGAAAAATTGTGACCCACCCTGTGTCCCTTAC...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGCTTTCTGGTTCTCATaGCTGAAGTTCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSAFWFS*LKFTVK
Trigger: CTTCACGGTGAACTTCAGCCATGAGAACCAGAAAGC...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATATTGCGGATGATTTCTaGAGCAATCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDIADDF*SNQVTD
Trigger: ATCAGTAACTTGATTGCTTCAGAAATCATCCGCAAT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGATTGCGGATGATTTCTaGAGCAATCAAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRIADDF*SNQVTD
Trigger: ATCAGTAACTTGATTGCTTCAGAAATCATCCGCAAT...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATAAATCTGCCCTCAGATaGCACAAGCTTTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHKSALR*HKLLEL
Trigger: AAGCTCCAAAAGCTTGTGTCATCTGAGGGCAGATTT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGGAGAAGCACATACTaGAGAAGAAAATCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYWRSTY*RRKSSE
Trigger: TTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCTGATGTAAAAACATaGTGGTTTCGCTGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYSDVKT*WFRCSG
Trigger: TCCTGAACAGCGAAACCATCATGTTTTTACATCAGA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTGGTCCAGTAAATATTaGGTTACCTTTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVWSSKY*VTFAWC
Trigger: GCACCAAGCAAAGGTAACGCAATATTTACTGGACCA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATATCTCTCGGATAATATaGGATATCATCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDISRII*DIILIL
Trigger: CAAGATGAGGATGATATCCCATATTATCCGAGAGAT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACAGATTTGTCAATGACTaGACTTCAGGGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYRFVND*TSGYGF
Trigger: GAAACCATACCCTGAAGTCCAGTCATTGACAAATCT...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCTGGAGAAGCTGCTTTaGAAATTGACATCACCATCA +
Preference number: 4 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVLEKLL*KLTSPS
Trigger: TGATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGGAGTGGCTTGTTCTTaGTGCAATAGGCAACTGAAA +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYGVACS*CNRQLK
Trigger: TTTCAGTTGCCTATTGCACCAAGAACAAGCCACTCC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGTTTTGATCAATATCTaGCTCCTCTCTCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSVLINI*LLSHGD
Trigger: GTCTCCATGAGAGAGGAGTCAGATATTGATCAAAAC...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGATATTGCGTTACCTTTaGTTGGTGCTCTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRILRYL*LVLYFV
Trigger: TACAAAATAGAGCACCAAGCAAAGGTAACGCAATAT...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATTGGTCCAGTAAATATTaGGTTACCTTTGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYWSSKY*VTFAWC
Trigger: GCACCAAGCAAAGGTAACGCAATATTTACTGGACCA...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACGAAGTCTGAAACGGTaGAGAAATTCATATTCCGGT +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLARSLKR*RNSYSG
Trigger: ACCGGAATATGAATTTCTGCACCGTTTCAGACTTCG...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTACGATCTGCAGCAGGTaGAGGTATTTCTGCATTAAT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSTICSR*RYFCIN
Trigger: ATTAATGCAGAAATACCTGCACCTGCTGCAGATCGT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTCTAAGATTCTTGTATaGAAGGGTGCTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSSKILV*KGAVSP
Trigger: AGGGGAAACAGCACCCTTGCATACAAGAATCTTAGA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACATCTCTCGGATAATATaGGATATCATCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYISRII*DIILIL
Trigger: CAAGATGAGGATGATATCCCATATTATCCGAGAGAT...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATCATCACTCTGGTTTTaGTCAATATCTGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLASSLWF*SISDSS
Trigger: AGAGGAGTCAGATATTGATCAAAACCAGAGTGATGA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTCTCATCCAGTTGTATTaGGACTGCTATTCATGCTAT +
Preference number: 4 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSLIQLY*DCYSCY
Trigger: ATAGCATGAATAGCAGTCTCAATACAACTGGATGAG...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATCAACCCATAGAACTGTaGAAGGTAACAAAAATGGTT +
Preference number: 4 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYQPIEL*KVTKMV
Trigger: AACCATTTTTGTTACCTTTCACAGTTCTATGGGTTG...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTGACTGAAACTTCATaGGAGACTCCAAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYVTETS*ETPNKN
Trigger: GTTCTTATTTGGAGTCTCTCATGAAGTTTCAGTCAC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATATTTTAAAATCCAAGTaGTCTATGTCTTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYILKSK*SMSWPD
Trigger: ATCCGGCCAAGACATAGATCACTTGGATTTTAAAAT...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR TCA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATCAACCCATAGAACTGTaGAAGGTAACAAAAATGGTT +
Preference number: 4 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYQPIEL*KVTKMV
Trigger: AACCATTTTTGTTACCTTTCACAGTTCTATGGGTTG...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAATATTGCGTTACCTTTaGTTGGTGCTCTATTTTGTA +
Preference number: 4 (lower is better)
Translates to: FIFRFYRNLRTRTICILGILRYL*LVLYFV
Trigger: TACAAAATAGAGCACCAAGCAAAGGTAACGCAATAT...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR GCA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGGAATTTTCTTCAAATaGGTTCATCATGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAGIFFK*VHHEPI
Trigger: AATGGGCTCATGATGAACGCATTTGAAGAAAATTCC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CCA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATGATGACACAAGCTTTTaGAGCTTATCAATCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYDDTSF*SLSIKA
Trigger: AGCTTTGATTGATAAGCTCCAAAAGCTTGTGTCATC...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp GCGGTGGTGGCGGCGGCAGACGAGGAAGCCAGCCATGTGAGGAGGTaGATGGAGTGGTGCCCCGGGGGCGGACGGACGGACAAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AVVAAADEEASHVRR*MEWCPGGGRTDKLV
Trigger: CACCAACTTGTCCGTCCGTCCGCCCCCGGGGCACCACTCCATCCACCTCCTCACATGGCTGGCTTCCTCGTCTGCCGCCGCCACCACCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559926.1
ENST00000560334.5
CDS TCA 90 bp TGTTCAGGGAGAGCTTCCGCCGGCGGCTCGGTGACGATGTCTTGGTaGTGGACAGAGGTGGCGGCGAGGAGAACTTGCGGGTGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: CSGRASAGGSVTMSW*WTEVAARRTCGWRA
Trigger: CGCGCGCCACCCGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCTCCCTGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp GCGGCAGACGAGGAAGCCAGCCATGTGAGGAGGTGGATGGAGTGGTaGCCCGGGGGCGGACGGACGGACAAGTTGGTGAATGCACGGAGG +
Preference number: 5 (lower is better)
Translates to: AADEEASHVRRWMEW*PGGGRTDKLVNARR
Trigger: CCTCCGTGCATTCACCAACTTGTCCGTCCGTCCGCCCCCGGGGCACCACTCCATCCACCTCCTCACATGGCTGGCTTCCTCGTCTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559926.1
ENST00000560334.5
CDS GCA 90 bp TGTCCGAACTCCGCTTGCTCAGGTAGCCTTTGCGCGTGCCGTCCTTaGGCGCCAGCAGTCCCAGGGACGCGACGTGGCCATCATTCAGCC +
Preference number: 5 (lower is better)
Translates to: CPNSACSGSLCACRP*APAVPGTRRGHHSA
Trigger: GGCTGAATGATGGCCACGTCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp GGGACGCGACGTGGCCATCATTCAGCCGGATCCCCTTCTGCATGGTaGTCAGAGGCCAGCGAGACCCCACGCGCTTACATCTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GTRRGHHSAGSPSAW*SEASETPRAYIFSA
Trigger: CGCGGAGAAGATGTAAGCGCGTGGGGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACGTCGCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp ACAGAGGTGGCGGCGAGGAGAACTTGCGGGTGGCGCGCGGGGACTTaGGGGGTTCACCGTACAGGAGCTTATTGTTCTGGCCACTGGCAA +
Preference number: 5 (lower is better)
Translates to: TEVAARRTCGWRAGT*GVHRTGAYCSGHWQ
Trigger: TTGCCAGTGGCCAGAACAATAAGCTCCTGTACGGTGAACCCCCCAAGTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGCCACCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp CCAGGGACGCGACGTGGCCATCATTCAGCCGGATCCCCTTCTGCATaGTGCTCAGAGGCCAGCGAGACCCCACGCGCTTACATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PGTRRGHHSAGSPSA*CSEASETPRAYIFS
Trigger: GGAGAAGATGTAAGCGCGTGGGGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACGTCGCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp GCCAGGCCCAGCGCACACATCAGGCTGGAGCAGAGTTTCGGTGGCTaGAGTTTGTCTGACCCATGGAGCACCCCGGGTCAAGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: ARPSAHIRLEQSFGG*SLSDPWSTPGQAWL
Trigger: AAGCCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCGCTGGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCGGTACTTCTCCTTGTTaGGGGTGCCCTCGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGGTSPC*GCPRWP
Trigger: GGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACC...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp TCTTGCGCATGCTGTCAGCATGGGGTGACCGGATGTAGTCCTGGATaGTGGTCTTCCACTTCCGCCGGCACAGCCAGCCCCGCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SCACCQHGVTGCSPG*WSSTSAGTASPAGS
Trigger: GCTTCCTGCGGGGCTGGCTGTGCCGGCGGAAGTGGAAGACCATCATCCAGGACTACATCCGGTCACCCCATGCTGACAGCATGCGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 90 bp TGGGTCAGAGTCCTCTACCCCAGCACTCCTACTTGGGGCTGTCCTTaGCAAGGGCGCTCTTCACCTCCCGGGCCTCTGACCAGCCCACAT +
Preference number: 5 (lower is better)
Translates to: WVRVLYPSTPTWGCP*QGRSSPPGPLTSPH
Trigger: ATGTGGGCTGGTCAGAGGCCCGGGAGGTGAAGAGCGCCCTTGTCAAGGACAGCCCCAAGTAGGAGTGCTGGGGTAGAGGACTCTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561112.1
CDS GCA 90 bp CCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTTaGTATGGCAAAGGCAGAGGCGGCCGACAAGGCACTGCGGTTATT +
Preference number: 5 (lower is better)
Translates to: PVLLLVWGALVGPGG*YGKGRGGRQGTAVI
Trigger: AATAACCGCAGTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp CTGCACTGGCTAAGGACATCCTCCGGTACTTCTCCTTGTTTGGGGTaGCCTCGTTGGCCCCGGCGGTTGCTATGGCAAAGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LHWLRTSSGTSPCLG*PRWPRRLLWQRQRR
Trigger: CCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAGCCAGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp AGTCCCAGGGACGCGACGTGGCCATCATTCAGCCGGATCCCCTTCTaGATGGTGCTCAGAGGCCAGCGAGACCCCACGCGCTTACATCTT +
Preference number: 5 (lower is better)
Translates to: SPRDATWPSFSRIPF*MVLRGQRDPTRLHL
Trigger: AAGATGTAAGCGCGTGGGGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACGTCGCGTCCCTGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp ATTTTGTGTTGTCCGAACTCCGCTTGCTCAGGTAGCCTTTGCGCGTaGCGTCCTTGCGCGCCAGCAGTCCCAGGGACGCGACGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: ILCCPNSACSGSLCA*RPCAPAVPGTRRGH
Trigger: ATGGCCACGTCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp CTAAGGACATCCTCCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTTaGCCCCGGCGGTTGCTATGGCAAAGGCAGAGGCGGCCGACAAGG +
Preference number: 5 (lower is better)
Translates to: LRTSSGTSPCLGCPR*PRRLLWQRQRRPTR
Trigger: CCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp GGCGCCGAGCCGCGGCTTCTTGAATCCAGATATACCATTCCCCGCTaGAACCTCTTCTCCGCTCCGCAGAGCCCCAGTACCCGGAAGATG +
Preference number: 5 (lower is better)
Translates to: GAEPRLLESRYTIPR*NLFSAPQSPSTRKM
Trigger: CATCTTCCGGGTACTGGGGCTCTGCGGAGCGGAGAAGAGGTTCCAGCGGGGAATGGTATATCTGGATTCAAGAAGCCGCGGCTCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp GGGCTTTGCCAAGCGACCTCGCCAGGCCCAGCGCACACATCAGGCTaGAGCAGAGTTTCGGTGGCTGGAGTTTGTCTGACCCATGGAGCA +
Preference number: 5 (lower is better)
Translates to: GLCQATSPGPAHTSG*SRVSVAGVCLTHGA
Trigger: TGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCGCTGGGCCTGGCGAGGTCGCTTGGCAAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 90 bp TTTGCCATTTTGTGTTGTCCGAACTCCGCTTGCTCAGGTAGCCTTTaGGCGTGCCGTCCTTGCGCGCCAGCAGTCCCAGGGACGCGACGT +
Preference number: 5 (lower is better)
Translates to: FAILCCPNSACSGSL*ACRPCAPAVPGTRR
Trigger: ACGTCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAATGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp AGCCGCTCGATCTCGATCTCCCCATCCTCGATCTGCTGCCGAAGCTaGTTGGCCACGGTCTTCTCTGTCTCCACGATCTGCAGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SRSISISPSSICCRS*LATVFSVSTICSRC
Trigger: GCACCTGCTGCAGATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp ACTTCTCCTTGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTTGCTATaGCAAAGGCAGAGGCGGCCGACAAGGCACTGCGGTTATTGTCCA +
Preference number: 5 (lower is better)
Translates to: TSPCLGCPRWPRRLL*QRQRRPTRHCGYCP
Trigger: TGGACAATAACCGCAGTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp TCCTGGGTCAGAGTCCTGATGATGTTGGCTGCAGCCTTCCGCTCCTaGGTCAGGAGCTCCGGGTCGTGCATGACTTCTTCCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SWVRVLMMLAAAFRS*VRSSGSCMTSSRKP
Trigger: CGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCTGACCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CCA 90 bp GGGCCTCCTGTGTTTGGGCACCTTGCCCCTGAACTCCTCAGGAGTTaGGCACGGGTCCTTGTTGAGTGTGCCTGTGCTCCCACATCTCTC +
Preference number: 5 (lower is better)
Translates to: GPPVFGHLAPELLRS*ARVLVECACAPTSL
Trigger: GAGAGATGTGGGAGCACAGGCACACTCAACAAGGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAAGGTGCCCAAACACAGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp ATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTGGGGAGCGCGAACCACTTGGTTaGCCATTTTGTGTTGTCCGA +
Preference number: 5 (lower is better)
Translates to: MLGGCLGGHLNPGAWAGEREPLG*PFCVVR
Trigger: TCGGACAACACAAAATGGCAAACCAAGTGGTTCGCG...CTCCCCAGCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACTTCTCCAGCGGCTCCTaGGCCGACAGCGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDFSSGS*ADSAGL
Trigger: CAAGCCGGCGCTGTCGGCCAAGGAGCCGCTGGAGAA...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp AGTGATGATGGGGATGTTCAGGGAGAGCTTCCGCCGGCGGCTCGGTaGCGATGTCTTGGTGATGGACAGAGGTGGCGGCGAGGAGAACTT +
Preference number: 5 (lower is better)
Translates to: SDDGDVQGELPPAAR*RCLGDGQRWRRGEL
Trigger: AAGTTCTCCTCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCTCCCTGAACATCCCCATCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp GCGCGAACCACTTGGTTTGCCATTTTGTGTTGTCCGAACTCCGCTTaGTCAGGTAGCCTTTGCGCGTGCCGTCCTTGCGCGCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ARTTWFAILCCPNSA*SGSLCACRPCAPAV
Trigger: GACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAATGGCAAACCAAGTGGTTCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp TCTGCCTTCAGCCGCTCGATCTCGATCTCCCCATCCTCGATCTGCTaGCGAAGCTGCTTGGCCACGGTCTTCTCTGTCTCCACGATCTGC +
Preference number: 5 (lower is better)
Translates to: SAFSRSISISPSSIC*RSCLATVFSVSTIC
Trigger: GCAGATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCGGCTGAAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp GCTCGATCTCGATCTCCCCATCCTCGATCTGCTGCCGAAGCTGCTTaGCCACGGTCTTCTCTGTCTCCACGATCTGCAGCAGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ARSRSPHPRSAAEAA*PRSSLSPRSAAGAG
Trigger: ACCTGCACCTGCTGCAGATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp AACATGGTGAGGCCCATAGCAGGACTCCTTCTCTGGGGAGGTCATTaGCTATGCCCATGGACTGCCACCTCGCTACTCTTGCCCCCGTCC +
Preference number: 5 (lower is better)
Translates to: NMVRPIAGLLLWGGH*LCPWTATSLLLPPS
Trigger: GGACGGGGGCAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTATGGGCCTCACCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CCA 90 bp GGGCTGCAGACCAACATGGTGAGGCCCATAGCAGGACTCCTTCTCTaGGGAGGTCATTGGCTATGCCCATGGACTGCCACCTCGCTACTC +
Preference number: 5 (lower is better)
Translates to: GLQTNMVRPIAGLLL*GGHWLCPWTATSLL
Trigger: GAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTATGGGCCTCACCATGTTGGTCTGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGCCAGGTCCAGGGCCTaGCCGCCAGTGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKARSRA*PPVMMG
Trigger: CCCCATCATCACTGGCGGCAAGGCCCTGGACCTGGC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGCGCCCCCTGGTGATCTaGCCCTTTTCAGACATGGGC +
Preference number: 5 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKRPLVI*PFSDMG
Trigger: GCCCATGTCTGAAAAGGGCAAGATCACCAGGGGGCG...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp CGCACACATCAGGCTGGAGCAGAGTTTCGGTGGCTGGAGTTTGTCTaGCCCATGGAGCACCCCGGGTCAAGCCTGGCTTTGTGCACCTTT +
Preference number: 5 (lower is better)
Translates to: RTHQAGAEFRWLEFV*PMEHPGSSLALCTF
Trigger: AAAGGTGCACAAAGCCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 90 bp ATCTCTGCCTTCAGCCGCTCGATCTCGATCTCCCCATCCTCGATCTaGTGCCGAAGCTGCTTGGCCACGGTCTTCTCTGTCTCCACGATC +
Preference number: 5 (lower is better)
Translates to: ISAFSRSISISPSSI*CRSCLATVFSVSTI
Trigger: GATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCGGCTGAAGGCAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp ATCAGGCTGGAGCAGAGTTTCGGTGGCTGGAGTTTGTCTGACCCATaGAGCACCCCGGGTCAAGCCTGGCTTTGTGCACCTTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: IRLEQSFGGWSLSDP*STPGQAWLCAPFPV
Trigger: CACAGGGAAAGGTGCACAAAGCCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCGTGTCCAGCGTGGCCTaGCTGAAGGGTGACATGGCC +
Preference number: 5 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVVSSVA*LKGDMA
Trigger: GGCCATGTCACCCTTCAGCAAGGCCACGCTGGACAC...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGACCACCTGGTTCCTCTaGCGCATGCTGTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKETTWFL*RMLSAW
Trigger: CCATGCTGACAGCATGCGCAAGAGGAACCAGGTGGT...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCCAGGGGAGGCGGCCTaGGGAGCTCTGGAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWPGEAA*GALEWV
Trigger: AACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTGG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp CGGGCTTCTCAGGGGTCGTATCGCCCTCATCTGGAATCTTGTTGGTaGAGCTGCTGGACACATAGAGCTTGCTGGTGTCCAGCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RASQGSYRPHLESCW*SCWTHRACWCPAWP
Trigger: AGGCCACGCTGGACACCAGCAAGCTCTATGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGGCGATACGACCCCTGAGAAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp ATGTTGGCTGCAGCCTTCCGCTCCTGGGTCAGGAGCTCCGGGTCGTaGATGACTTCTTCCAGGAAGCCGATCACCTTGCATTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: MLAAAFRSWVRSSGS*MTSSRKPITLHLSS
Trigger: TGAGCTCAAATGCAAGGTGATCGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGCAGCCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CCA 90 bp GCCTTCACGCCTTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCCTGGGTCAGAGTCCTGATGATGTTG +
Preference number: 5 (lower is better)
Translates to: AFTPSAICVISSSVI*LSPGSSWVRVLMML
Trigger: CAACATCATCAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAAGGCGTGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CCA 90 bp CATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCTCAGCTTCAGGTaGGGAGTTTTGGTTCTATTCGGAGAGAAGACTCGTAGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: HVPGSSWVWAGLSFR*GVLVLFGEKTRRGF
Trigger: AAAGCCTCTACGAGTCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCCAGCCCAGACCCAGCTGCTCCCGGGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp TTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTGGTTGTCACCTaGGTCCTCCTGGGTCAGAGTCCTCTACCCCAGCACTCCTACTTG +
Preference number: 5 (lower is better)
Translates to: FSHLRDLLQRDLVVT*VLLGQSPLPQHSYL
Trigger: CAAGTAGGAGTGCTGGGGTAGAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561112.1
CDS-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAAAGGCACTGCGGTTATaGTCCAGTTCACGACAGGAG +
Preference number: 5 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAKALRL*SSSRQE
Trigger: CTCCTGTCGTGAACTGGACAATAACCGCAGTGCCTT...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCATTCGTCACAATCTTTaGCGTCCTCTGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGIRHNL*RPLSSA
Trigger: AGCTGAGGACAGAGGACGCAAAAGATTGTGACGAAT...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp AAGGTTAAGGGACTCAGCCAAGGCCATAGGGCTGAGAGCTGGCTCTaGACCAGCCTCTTTGTTCTGCAGGGCACTGCTGCTGGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: KVKGLSQGHRAESWL*TSLFVLQGTAAGKG
Trigger: TCCTTTCCCAGCAGCAGTGCCCTGCAGAACAAAGAGGCTGGTTCAGAGCCAGCTCTCAGCCCTATGGCCTTGGCTGAGTCCCTTAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS TCA 90 bp GGACACATAGAGCTTGCTGGTGTCCAGCGTGGCCTTGCTGAAGGGTaGCATGGCCGAGTACATGCTGGTGTAGCCATTGGAGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GHIELAGVQRGLAEG*HGRVHAGVAIGVAA
Trigger: AGCTGCAACTCCAATGGCTACACCAGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 90 bp AGCTGCTGGACACATAGAGCTTGCTGGTGTCCAGCGTGGCCTTGCTaGAGGGTGACATGGCCGAGTACATGCTGGTGTAGCCATTGGAGT +
Preference number: 5 (lower is better)
Translates to: SCWTHRACWCPAWPC*RVTWPSTCWCSHWS
Trigger: ACTCCAATGGCTACACCAGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGTCCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp ACACCCAGTGGCGGAGCACGTTCAAGACACGATTGGTGGCTGCTCTaGGGATCACAAACTCCTTGTCTCCATTCCTCTGGTCTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: TPSGGARSRHDWWLL*GSQTPCLHSSGLGE
Trigger: TTCCCCCAGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCCACTGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp CTTGGACACCCAGTGGCGGAGCACGTTCAAGACACGATTGGTGGCTaGTCTGCGGATCACAAACTCCTTGTCTCCATTCCTCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LGHPVAEHVQDTIGG*SADHKLLVSIPLVW
Trigger: CCAGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCCACTGGGTGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 90 bp GCTATGCCCATGGACTGCCACCTCGCTACTCTTGCCCCCGTCCCCTaGCTAGTGAAACAGACGCTCAGTATTCATGCAACACCGCTCTTT +
Preference number: 5 (lower is better)
Translates to: AMPMDCHLATLAPVP*LVKQTLSIHATPLF
Trigger: AAAGAGCGGTGTTGCATGAATACTGAGCGTCTGTTTCACTAGGCAGGGGACGGGGGCAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CCA 90 bp TTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTGGTTGTCACCTaGGTCCTCCTGGGTCAGAGTCCTGATGATGTTGGCTGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: FSHLRDLLQRDLVVT*VLLGQSPDDVGCSL
Trigger: AAGGCTGCAGCCAACATCATCAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS-3UTR CAA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTCTGAACCAGCCTCTTaGTTCTGCAGGGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGSEPAS*FCRALL
Trigger: CAGCAGTGCCCTGCAGAACAAAGAGGCTGGTTCAGA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CAA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGGGCGGCGAGGAGAACTaGCGGGTGGCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQGGEEN*RVARGD
Trigger: GTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGCC...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCTCCGGTACTTCTCCTaGTTTGGGGTGCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDLRYFS*FGVPSL
Trigger: CAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGTTGCGCGTGCCGTCCTaGCGCGCCAGCAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SETKRICTVSSSTCPREQLRVPS*RASSPR
Trigger: CCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAA...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTATGCTGCCGAAGCTGCTaGGCCACGGTCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LILEQGATWGLNEMAALVCCRSC*ATVFSV
Trigger: GACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCA...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTCGGCAAGAGTCGACGTGGCTTGGTGTTTGTGACTCCATTTCCTCGGGAAGTCACCACCTGGTTCCTCTaGCGCATGCTGTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: VGKSRRGLVFVTPFPREVTTWFL*RMLSAW
Trigger: CCATGCTGACAGCATGCGCAAGAGGAACCAGGTGGT...GACTTCCCGAGGAAATGGAGTCACAAACACCAAGCCACGTCGACTCTTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGGTTGCGGACGAACTCTaGGTAGATGTTGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPVADEL*VDVEHG
Trigger: CCCATGCTCAACATCTACCAAGAGTTCGTCCGCAAC...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATGGAACATGCTGGGAGGATGCCTGGGTGGCCACCTCAACCCAGGAGCCTGGGCTTCATCATGAGCCCATaGCATCGGATGTTATCCACA +
Preference number: 5 (lower is better)
Translates to: MEHAGRMPGWPPQPRSLGFIMSP*HRMLST
Trigger: TGTGGATAACATCCGATGCAATGGGCTCATGATGAA...GCCCAGGCTCCTGGGTTGAGGTGGCCACCCAGGCATCCTCCCAGCATGTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCAGGGGAGGCGGCCTaGGGAGCTCTGGAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPGEAA*GALEWV
Trigger: AACCCACTCCAGAGCTCCCAAGGCCGCCTCCCCTGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp GCTGCAGGATCCCGAGACCTGGGCAGTTTAGAAGGACTTAGTGGGTaGCTCCCAGGAGCCTGCGCTCAGAGCAGGAAATGGCAGATTTTT +
Preference number: 5 (lower is better)
Translates to: AAGSRDLGSLEGLSG*LPGACAQSRKWQIF
Trigger: AAAAATCTGCCATTTCCTGCTCTGAGCGCAGGCTCCTGGGAGTCACCCACTAAGTCCTTCTAAACTGCCCAGGTCTCGGGATCCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 90 bp GGGAAGCATTTGCCCCAGGTTTCCCCAGTCCCTCCCTCCTCTGTGTaGCCTGCCTATGTCTCTGCAAGTCCAGAACCTGGTTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: GKHLPQVSPVPPSSV*PAYVSASPEPGLHK
Trigger: TTTATGCAAACCAGGTTCTGGACTTGCAGAGACATAGGCAGGGCACACAGAGGAGGGAGGGACTGGGGAAACCTGGGGCAAATGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS-3UTR CAA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATGGCGGCGAGGAGAACTaGCGGGTGGCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: RFYRNLRTRTICILGEAHGGEEN*RVARGD
Trigger: GTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGCC...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGACTTCTGAGCTCTGCTaGCTGAGCGCTGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRTSELC*LSAEGS
Trigger: AGACCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGT...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCGTTGGCCCCGGCGGTaGCTATGGCAAAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNRWPRR*LWQRQR
Trigger: CCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATTTTGGGGTGCCCTCGTaGGCCCCGGCGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNFGVPS*APAVAM
Trigger: CATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAA...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTTTGGGGTGCCCTCGTaGGCCCCGGCGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAIFGVPS*APAVAM
Trigger: CATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAAGAGTCCTGATGATGTaGGCTGCAGCCTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LILEQGATWGLNEMAALVRVLMM*AAAFRS
Trigger: GGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCT...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCTCATCTTGGAGAAGTaGACCAGGCCGTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRLILEK*TRPSSV
Trigger: CACGGAAGACGGCCTGGTCAACTTCTCCAAGATGAG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGATATCATCCTCATCTaGGAGAAGTTGACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKDIILI*EKLTRP
Trigger: CGGCCTGGTCAACTTCTCCAAGATGAGGATGATATC...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGGTTTGCCATTTTGTGTaGTCCGAACTCCGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPVCHFV*SELRLL
Trigger: GAGCAAGCGGAGTTCGGACAACACAAAATGGCAAAC...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCGAGTGCAGGAAGGTGTaGAGGAAGTCGATGCTCAGG +
Preference number: 5 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPECRKV*RKSMLR
Trigger: CCTGAGCATCGACTTCCTCAACACCTTCCTGCACTC...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp CCTGAACTTGGCCTACTGCTGGACAGCCTTGGCCAAGTCCTTCATTaGCCCATGACTTTTGAGAAGCAAAGGCTAAGGTGGCCTGCACTC +
Preference number: 5 (lower is better)
Translates to: PELGLLLDSLGQVLH*PMTFEKQRLRWPAL
Trigger: GAGTGCAGGCCACCTTAGCCTTTGCTTCTCAAAAGTCATGGGGCAATGAAGGACTTGGCCAAGGCTGTCCAGCAGTAGGCCAAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CCA 90 bp GGAGCAGCTGGGTCTGGGCTGGGCTCAGCTTCAGGTGGGGAGTTTTaGTTCTATTCGGAGAGAAGACTCGTAGAGGCTTTCTTCATCCAT +
Preference number: 5 (lower is better)
Translates to: GAAGSGLGSASGGEF*FYSERRLVEAFFIH
Trigger: ATGGATGAAGAAAGCCTCTACGAGTCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCCAGCCCAGACCCAGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCCGTACAGGAGCTTATaGTTCTGGCCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRPYRSL*FWPLAN
Trigger: GTTTGCCAGTGGCCAGAACAATAAGCTCCTGTACGG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACGGCGGCGAGGAGAACTaGCGGGTGGCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYGGEEN*RVARGD
Trigger: GTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGCC...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCTCCGGTACTTCTCCTaGTTTGGGGTGCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWLRYFS*FGVPSL
Trigger: CAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTCCAGCGTGATCTGGTaGTCACCTGGGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGSSVIW*SPGSSW
Trigger: CCAGGAGGACCCAGGTGACAACCAGATCACGCTGGA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCACAGTTTCATCCATCCTaGTCCGAAGAACTCCTCATA +
Preference number: 5 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAQFHPS*SEELLI
Trigger: TATGAGGAGTTCTTCGGACAAGGATGGATGAAACTG...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGGCGCTCACCCTGGCGTaGATGTCCTCATTGCGGATG +
Preference number: 5 (lower is better)
Translates to: DLAELMKQVKLAIKISWQALTLA*MSSLRM
Trigger: CATCCGCAATGAGGACATCAACGCCAGGGTGAGCGC...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACCCGAGCCGCGGCTTCTaGAATCCAGATATACCATTC +
Preference number: 5 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDPSRGF*NPDIPF
Trigger: GAATGGTATATCTGGATTCAAGAAGCCGCGGCTCGG...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTAATCCTAGAGCAAGGAGCGACGTGGGGCCTGAACGAGATGGCAGCATTGGTAAGCGGGCGCAGGAAATaGTTGACAAGGATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LILEQGATWGLNEMAALVSGRRK*LTRMCS
Trigger: GCTGCACATCCTTGTCAACAATTTCCTGCGCCCGCT...TACCAATGCTGCCATCTCGTTCAGGCCCCACGTCGCTCCTTGCTCTAGGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCGTTGCGGACGAACTCTaGGTAGATGTTGAGCATGGG +
Preference number: 5 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPVADEL*VDVEHG
Trigger: CCCATGCTCAACATCTACCAAGAGTTCGTCCGCAAC...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACGAGCTCTGGAGTGGGTaGTGCCTTGCAGTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYELWSG*CLAVGP
Trigger: GGGGCCCACTGCAAGGCACAACCCACTCCAGAGCTC...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp GCAAACTCTGGAGTTTCTCTGGCAGACCATGGAGGACTCCACCATTaGGGTCCAGGAAATCTAGGGGTCTTGTGGGTAGACAGACGAACA +
Preference number: 5 (lower is better)
Translates to: ANSGVSLADHGGLHH*GPGNLGVLWVDRRT
Trigger: TGTTCGTCTGTCTACCCACAAGACCCCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCCAGAGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAAGTGTCCAGCGTGGCCTaGCTGAAGGGTGACATGGCC +
Preference number: 5 (lower is better)
Translates to: AELMKQVKLAIKISWQSKVSSVA*LKGDMA
Trigger: GGCCATGTCACCCTTCAGCAAGGCCACGCTGGACAC...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCGGATCACAAACTCCTaGTCTCCATTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWRITNS*SPFLWS
Trigger: AGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCCGATCACCTTGCATTaGAGCTCATCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWPITLH*SSSLVS
Trigger: TGAGACCAACGATGAGCTCAAATGCAAGGTGATCGG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCAGGAAGCCGATCACCTaGCATTTGAGCTCATCGTTG +
Preference number: 5 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPRKPIT*HLSSSL
Trigger: CAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCT...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCCAGCGTGATCTGGTaGTCACCTGGGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSSVIW*SPGSSW
Trigger: CCAGGAGGACCCAGGTGACAACCAGATCACGCTGGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCTCATCTTGGAGAAGTaGACCAGGCCGTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWLILEK*TRPSSV
Trigger: CACGGAAGACGGCCTGGTCAACTTCTCCAAGATGAG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGGATATCATCCTCATCTaGGAGAAGTTGACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRDIILI*EKLTRP
Trigger: CGGCCTGGTCAACTTCTCCAAGATGAGGATGATATC...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGCAAGGGTGCTGTTTCCCCTCTGAGAAGAGTGAGGAGTCTAGGGAAGAGGGACGATATCATCCTCATCTaGGAGAAGTTGACCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CKGAVSPLRRVRSLGKRDDIILI*EKLTRP
Trigger: CGGCCTGGTCAACTTCTCCAAGATGAGGATGATATC...GTCCCTCTTCCCTAGACTCCTCACTCTTCTCAGAGGGGAAACAGCACCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGGTATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGTTGCGTTACCTTTGCTaGGTGCTCTATTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: RYGVLDTLDLRSQAGLGKLRYLC*VLYFVG
Trigger: GCCTACAAAATAGAGCACCAAGCAAAGGTAACGCAA...CTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGTCGCTGTCTTCATCGTaGGGGGCGACAGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ETKRICTVSSSTCPREQLSLSSS*GATVWV
Trigger: CACCCAGACTGTCGCCCCCAACGATGAAGACAGCGA...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTAAGTCACGGTTCTGCTaGCAGTGGGCCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGKSRFC*QWARIC
Trigger: GCAGATCCTGGCCCACTGCAAGCAGAACCGTGACTT...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp CCAAGCCACACAGAGAGGCCACGTGTGGATGCTCCCATGAACAGCCCCAGTGCAGGAAAAGTGACATTTTaGTGTTCCCGACTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: PSHTERPRVDAPMNSPSAGKVTF*CSRLSV
Trigger: CACTGAAAGTCGGGAACACAAAAATGTCACTTTTCC...TGCACTGGGGCTGTTCATGGGAGCATCCACACGTGGCCTCTCTGTGTGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGAAGGAGGCGTCGGACTaGATCATCTGCGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: KRICTVSSSTCPREQLGLKEASD*IICGTV
Trigger: CACTGTGCCGCAGATGATCAAGTCCGACGCCTCCTT...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558480.7
CDS CCA 90 bp TTACTTCATCGTGCATTATTCTGGACAGCTCCTCCAGTTTGGACTTaGCGTAGTCCAGGCTGTTGCGCTCAACGTGCTCATGAGGCGTGT +
Preference number: 5 (lower is better)
Translates to: LLHRALFWTAPPVWT*RSPGCCAQRAHEAC
Trigger: ACACGCCTCATGAGCACGTTGAGCGCAACAGCCTGGACTACGCCAAGTCCAAACTGGAGGAGCTGTCCAGAATAATGCACGATGAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 90 bp CTCTCAGGAAATGCTAGCAAACTCTGGAGTTTCTCTGGCAGACCATaGAGGACTCCACCATTGGGGTCCAGGAAATCTAGGGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LSGNASKLWSFSGRP*RTPPLGSRKSRGLV
Trigger: CACAAGACCCCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCCAGAGTTTGCTAGCATTTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTCATCTGGAATCTTGTaGGTGAAGCTGCTGGACACA +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWSSGIL*VKLLDT
Trigger: TGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGCAGTTTCATCCATCCTaGTCCGAAGAACTCCTCATA +
Preference number: 5 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGQFHPS*SEELLI
Trigger: TATGAGGAGTTCTTCGGACAAGGATGGATGAAACTG...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGGTTGCGTTACCTTTGCTaGGTGCTCTATTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: YVQYHLAHVPGSSWVWAGLRYLC*VLYFVG
Trigger: GCCTACAAAATAGAGCACCAAGCAAAGGTAACGCAA...CCCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTTCAGGTGGGGAGTTTaGGTTCTATTCGGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWFRWGV*VLFGEK
Trigger: CTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGACTTGGTTTGCCATTTaGTGTTGTCCGAACTCCGCT +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWTWFAI*CCPNSA
Trigger: AGCGGAGTTCGGACAACACAAAATGGCAAACCAAGT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTGACTGGATGCGCTCATaGTCCTTGAGCAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGDWMRS*SLSRDV
Trigger: CACATCCCTGCTCAAGGACAATGAGCGCATCCAGTC...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGCTGAATGAGGGAACCTaGTCTCACAAAGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKLNEGT*SHKGLA
Trigger: AGCCAGACCTTTGTGAGACAAGGTTCCCTCATTCAG...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTCTTGGCCGGATCCTTaGGCTTCCTCCTCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAISWPDP*ASSSVL
Trigger: AAGCACGGAGGAGGAAGCCAAAGGATCCGGCCAAGA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TATGGTGTCCTTGACACTCTGGATCTCCGGTCCCAGGCTGGGCTGGGTAAGGAGTGGAGTCTAAGATTCTaGTATGCAAGGGTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: YGVLDTLDLRSQAGLGKEWSLRF*YARVLF
Trigger: AAACAGCACCCTTGCATACAAGAATCTTAGACTCCA...CTCCTTACCCAGCCCAGCCTGGGACCGGAGATCCAGAGTGTCAAGGACACCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAGGGGAGGGATGGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGCATCAGCGGGAAGATTaGTCAATGACTGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: EGRDGWAKSETVQKFIFRHQRED*SMTGLQ
Trigger: CTGAAGTCCAGTCATTGACAAATCTTCCCGCTGATG...CCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCCATCCCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGACACATGGGGAGTTTaGAGACCTGCGATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKDTWGV*RPAILA
Trigger: AGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGGAGAGGTTAAGTGACTaGGCTGAGCTCATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKERLSD*AELMKQ
Trigger: CTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTC...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp ACTGCTGGACAGCCTTGGCCAAGTCCTTCATTGCCCCATGACTTTTaGGAAGCAAAGGCTAAGGTGGCCTGCACTCCTTATGTTGACTCA +
Preference number: 5 (lower is better)
Translates to: TAGQPWPSPSLPHDF*EAKAKVACTPYVDS
Trigger: TGAGTCAACATAAGGAGTGCAGGCCACCTTAGCCTTTGCTTCTCAAAAGTCATGGGGCAATGAAGGACTTGGCCAAGGCTGTCCAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CCA 90 bp TTAATTTTCTTGATGTCGCTGTCTTCATCGTTGGGGGCGACAGTCTaGGTGGACTGGATGCGCTCATTGTCCTTGAGCAGGGATGTGATC +
Preference number: 5 (lower is better)
Translates to: LIFLMSLSSSLGATV*VDWMRSLSLSRDVI
Trigger: GATCACATCCCTGCTCAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGACAGCGACATCAAGAAAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCCGTACAGGAGCTTATaGTTCTGGCCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGPYRSL*FWPLAN
Trigger: GTTTGCCAGTGGCCAGAACAATAAGCTCCTGTACGG...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATACTTCTGAGCTCTGCTaGCTGAGCGCTGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNTSELC*LSAEGS
Trigger: AGACCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGT...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATCGTTGGCCCCGGCGGTaGCTATGGCAAAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDRWPRR*LWQRQR
Trigger: CCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACG...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGTTGAGCCACGTCTTTTaGAGCCGGAAGATTGCACTG +
Preference number: 5 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWLSHVF*SRKIAL
Trigger: CAGTGCAATCTTCCGGCTCAAAAAGACGTGGCTCAA...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTCATCTTGGAGAAGTaGACCAGGCCGTCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNLILEK*TRPSSV
Trigger: CACGGAAGACGGCCTGGTCAACTTCTCCAAGATGAG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGATTCGTCACAATCTTTaGCGTCCTCTGTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKIRHNL*RPLSSA
Trigger: AGCTGAGGACAGAGGACGCAAAAGATTGTGACGAAT...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTACCCTCCCTGGTCCTCTaGATCATCTGCGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLPSLVL*IICGTV
Trigger: CACTGTGCCGCAGATGATCAAGAGGACCAGGGAGGG...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419573.7
CDS-3UTR CAA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGGTGTATTCTGGGTCGTaGCGTTGCTCTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SETKRICTVSSSTCPREQVYSGS*RCSGSR
Trigger: TCTGCTGCCAGAGCAACGCAACGACCCAGAATACAC...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCCCTCATCTGGAATCTaGTTGGTGAAGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNPSSGI*LVKLLD
Trigger: GTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGG...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCCCTCATCTGGAATCTaGTTGGTGAAGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: ETKRICTVSSSTCPREQLPSSGI*LVKLLD
Trigger: GTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCGGATCACAAACTCCTaGTCTCCATTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGRITNS*SPFLWS
Trigger: AGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCG...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGAGGAAGCCGATCACCTaGCATTTGAGCTCATCGTTG +
Preference number: 5 (lower is better)
Translates to: KRICTVSSSTCPREQLGLRKPIT*HLSSSL
Trigger: CAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCT...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTAGAGTCCTGATGATGTaGGCTGCAGCCTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPRVLMM*AAAFRS
Trigger: GGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCT...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTTGAGCCACGTCTTTTaGAGCCGGAAGATTGCACTG +
Preference number: 5 (lower is better)
Translates to: DLAELMKQVKLAIKISWQLSHVF*SRKIAL
Trigger: CAGTGCAATCTTCCGGCTCAAAAAGACGTGGCTCAA...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GATGGCAGCATTGGTACGAGGGGTGTGGTTCTGAGCAGAGAGGACTCCCTTCCGAATATTGCGTTACCTTaGCTTGGTGCTCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: DGSIGTRGVVLSREDSLPNIALP*LGALFC
Trigger: ACAAAATAGAGCACCAAGCAAAGGTAACGCAATATT...CGGAAGGGAGTCCTCTCTGCTCAGAACCACACCCCTCGTACCAATGCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATTGCGCGTGCCGTCCTaGCGCGCCAGCAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLALRVPS*RASSPR
Trigger: CCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGTTTGCCATTTTGTGTaGTCCGAACTCCGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KRICTVSSSTCPREQLGLVCHFV*SELRLL
Trigger: GAGCAAGCGGAGTTCGGACAACACAAAATGGCAAAC...CAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGAGCAGCGCGAACCACTaGGTTTGCCATTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: DLAELMKQVKLAIKISWQSSANH*VCHFVL
Trigger: CAACACAAAATGGCAAACCAAGTGGTTCGCGCTGCT...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTTCTCCAGCGGCTCCTaGGCCGACAGCGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: FYRNLRTRTICILGEAHTFSSGS*ADSAGL
Trigger: CAAGCCGGCGCTGTCGGCCAAGGAGCCGCTGGAGAA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACGGGCGCAGGAAATTGTaGACAAGGATGTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYGRRKL*TRMCSC
Trigger: GCAGCTGCACATCCTTGTCAACAATTTCCTGCGCCC...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAAGTCACGGTTCTGCTaGCAGTGGGCCAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLKSRFC*QWARIC
Trigger: GCAGATCCTGGCCCACTGCAAGCAGAACCGTGACTT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGCTCGGTGACGATGTCTaGGTGATGGACAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQLGDDV*VMDRGG
Trigger: GCCACCTCTGTCCATCACCAAGACATCGTCACCGAG...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGCCAGGTCCAGGGCCTaGCCGCCAGTGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYARSRA*PPVMMG
Trigger: CCCCATCATCACTGGCGGCAAGGCCCTGGACCTGGC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGCCAGGTCCAGGGCCTaGCCGCCAGTGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAARSRA*PPVMMG
Trigger: CCCCATCATCACTGGCGGCAAGGCCCTGGACCTGGC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTTCATCTGGAATCTTGTaGGTGAAGCTGCTGGACACA +
Preference number: 5 (lower is better)
Translates to: TKRICTVSSSTCPREQLGSSGIL*VKLLDT
Trigger: TGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGA...ACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCGTTGGCCCCGGCGGTaGCTATGGCAAAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVRWPRR*LWQRQR
Trigger: CCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATTTGAGCCACGTCTTTTaGAGCCGGAAGATTGCACTG +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNLSHVF*SRKIAL
Trigger: CAGTGCAATCTTCCGGCTCAAAAAGACGTGGCTCAA...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAATGCCTGGAGGAAACGGAAAAGCAGTTATGGAGCCAGCTGGCTGCAGGTCCCACCTTCTTAATTTTCTaGATGTCGCTGTCTTCATCG +
Preference number: 5 (lower is better)
Translates to: KCLEETEKQLWSQLAAGPTFLIF*MSLSSS
Trigger: CGATGAAGACAGCGACATCAAGAAAATTAAGAAGGT...GGGACCTGCAGCCAGCTGGCTCCATAACTGCTTTTCCGTTTCCTCCAGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTAGCGGGCGCAGGAAATaGTTGACAAGGATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPSGRRK*LTRMCS
Trigger: GCTGCACATCCTTGTCAACAATTTCCTGCGCCCGCT...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCCTGAATGAGGGAACCTaGTCTCACAAAGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAILNEGT*SHKGLA
Trigger: AGCCAGACCTTTGTGAGACAAGGTTCCCTCATTCAG...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGCGGATCTGCAGCACTTaGCAGGAGTTCATGGTTTTG +
Preference number: 5 (lower is better)
Translates to: ETKRICTVSSSTCPREQLRICST*QEFMVL
Trigger: CAAAACCATGAACTCCTGCAAAGTGCTGCAGATCCG...CAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGTGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATTTGAGACCTGCGATTTaGGCTGGAGAAGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: GWAKSETVQKFIFRFYRNLRPAI*AGEAAL
Trigger: CAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAA...ATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGCTCATCAAATATTCCTaGACTGAACGAATGAAACCC +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWLIKYS*TERMKP
Trigger: GGGTTTCATTCGTTCAGTCAAGGAATATTTGATGAG...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGTTAAGCCATTATGTTTaGGAGTGGCTTGTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWLSHYV*EWLVLG
Trigger: ACCAAGAACAAGCCACTCCAAAACATAATGGCTTAA...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp GACATCTCCAATTACCAGAGTGTCCATGGGACCAACAACGACTCTTaGAATCAATCTAGCTGTTTTGCAAAGTGCCTGCTGCCACATCAG +
Preference number: 5 (lower is better)
Translates to: DISNYQSVHGTNNDS*NQSSCFAKCLLPHQ
Trigger: CTGATGTGGCAGCAGGCACTTTGCAAAACAGCTAGATTGATTGCAAGAGTCGTTGTTGGTCCCATGGACACTCTGGTAATTGGAGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS-3UTR CAA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCTCGGTGACGATGTCTaGGTGATGGACAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRLGDDV*VMDRGG
Trigger: GCCACCTCTGTCCATCACCAAGACATCGTCACCGAG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGACTTCTGAGCTCTGCTaGCTGAGCGCTGAAGGGTCT +
Preference number: 5 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQTSELC*LSAEGS
Trigger: AGACCCTTCAGCGCTCAGCAAGCAGAGCTCAGAAGT...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTTTGGGGTGCCCTCGTaGGCCCCGGCGGTTGCTATG +
Preference number: 5 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSFGVPS*APAVAM
Trigger: CATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCTCCGGTACTTCTCCTaGTTTGGGGTGCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRLRYFS*FGVPSL
Trigger: CAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACGCGCTCACCCTGGCGTaGATGTCCTCATTGCGGATG +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYALTLA*MSSLRM
Trigger: CATCCGCAATGAGGACATCAACGCCAGGGTGAGCGC...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTTTGTAGGCAGTTTGTaGAAACTGGCGAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: DLAELMKQVKLAIKISWQFVGSL*KLANLS
Trigger: CGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAA...CTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGGCTGGAATATTGCGTTACCTTaGCTTGGTGCTCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: ICTVSSSTCPREQLGLGWNIALP*LGALFC
Trigger: ACAAAATAGAGCACCAAGCAAAGGTAACGCAATATT...CCAGCCCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTTCAGGTGGGGAGTTTaGGTTCTATTCGGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAIFRWGV*VLFGEK
Trigger: CTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTGACATTTTTGTGTTCCCGACTTTCAGTGGATGCTGGGCCAGTGGTCGGCAAGAAGAACAAGGACGATTaGTATTCTTGGAGAAGCACA +
Preference number: 5 (lower is better)
Translates to: VTFLCSRLSVDAGPVVGKKNKDD*YSWRST
Trigger: TGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTT...CTTGCCGACCACTGGCCCAGCATCCACTGAAAGTCGGGAACACAAAAATGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGCTGCCGAAGCTGCTaGGCCACGGTCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYCCRSC*ATVFSV
Trigger: GACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGCTGGGTCTGGCCTCATCCAGTTGTATaGAGACTGCTATTCATGCTA +
Preference number: 5 (lower is better)
Translates to: NEYVQYHLAHVPGSSWVWPHPVV*RLLFML
Trigger: TAGCATGAATAGCAGTCTCAATACAACTGGATGAGG...CCAGACCCAGCTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGAGCTCTGGAGTGGGTaGTGCCTTGCAGTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYELWSG*CLAVGP
Trigger: GGGGCCCACTGCAAGGCACAACCCACTCCAGAGCTC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp GGGACCAACAACGACTCTTGCAATCAATCTAGCTGTTTTGCAAAGTaGCTGCTGCCACATCAGCTAGGCACAGATTCCTTGTTTGTGATA +
Preference number: 5 (lower is better)
Translates to: GTNNDSCNQSSCFAK*LLPHQLGTDSLFVI
Trigger: TATCACAAACAAGGAATCTGTGCCTAGCTGATGTGGCAGCAGGCACTTTGCAAAACAGCTAGATTGATTGCAAGAGTCGTTGTTGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS GCA 90 bp ATCATCACAGCTACTATGCTTTCAGGGATCCCAGCAGTATTCCTGTaGTTCTCTCAGGAAATGCTAGCAAACTCTGGAGTTTCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: IITATMLSGIPAVFL*FSQEMLANSGVSLA
Trigger: TGCCAGAGAAACTCCAGAGTTTGCTAGCATTTCCTGAGAGAAGCACAGGAATACTGCTGGGATCCCTGAAAGCATAGTAGCTGTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp AAGGTATACAGACTTAGAGCATCTCAATGTAAGCTTGTAGTGACCGTTAGGCAGCCGTACAGGAGCTTATaGTTCTGGCCACTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: KVYRLRASQCKLVVTVRQPYRSL*FWPLAN
Trigger: GTTTGCCAGTGGCCAGAACAATAAGCTCCTGTACGG...CTGCCTAACGGTCACTACAAGCTTACATTGAGATGCTCTAAGTCTGTATACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATGTGTCCAGCGTGGCCTaGCTGAAGGGTGACATGGCC +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYVSSVA*LKGDMA
Trigger: GGCCATGTCACCCTTCAGCAAGGCCACGCTGGACAC...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAATCATCTGGAATCTTGTaGGTGAAGCTGCTGGACACA +
Preference number: 5 (lower is better)
Translates to: AELMKQVKLAIKISWQSKSSGIL*VKLLDT
Trigger: TGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGA...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACTTCAGGTGGGGAGTTTaGGTTCTATTCGGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYFRWGV*VLFGEK
Trigger: CTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAA...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAATGCGCTCATTGTCCTaGAGCAGGGATGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLMRSLS*SRDVIS
Trigger: AGAGATCACATCCCTGCTCAAGGACAATGAGCGCAT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATGACTGGATGCGCTCATaGTCCTTGAGCAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: RFYRNLRTRTICILGEAHDWMRS*SLSRDV
Trigger: CACATCCCTGCTCAAGGACAATGAGCGCATCCAGTC...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTCGCTGTCTTCATCGTaGGGGGCGACAGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVSLSSS*GATVWV
Trigger: CACCCAGACTGTCGCCCCCAACGATGAAGACAGCGA...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCTTCATCATGAGCCCATaGCATCGGATGTTATCCACA +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAIFIMSP*HRMLST
Trigger: TGTGGATAACATCCGATGCAATGGGCTCATGATGAA...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGGCCTCATCCAGTTGTATTGAGACTGCTATTCATGCTATCTGGTGTTAATCCTCGGATCTGCAGCACTTaGCAGGAGTTCATGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GPHPVVLRLLFMLSGVNPRICST*QEFMVL
Trigger: CAAAACCATGAACTCCTGCAAAGTGCTGCAGATCCG...AGGATTAACACCAGATAGCATGAATAGCAGTCTCAATACAACTGGATGAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp CGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATGAGTGCAGGAAGGTGTaGAGGAAGTCGATGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RFYRNLRTRTICILGEAHECRKV*RKSMLR
Trigger: CCTGAGCATCGACTTCCTCAACACCTTCCTGCACTC...ATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGAAGCTGCTTTGGAAATaGACATCACCATCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SETKRICTVSSSTCPREQKLLWK*TSPSAG
Trigger: TCCCGCTGATGGTGATGTCAATTTCCAAAGCAGCTT...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGGCTGGAGAAGCTGCTTaGGAAATTGACATCACCATC +
Preference number: 5 (lower is better)
Translates to: SETKRICTVSSSTCPREQAGEAA*EIDITI
Trigger: GATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAGC...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATAGCCAATCCCTGAACTaGGCCTACTGCTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYSQSLN*AYCWTA
Trigger: GGCTGTCCAGCAGTAGGCCAAGTTCAGGGATTGGCT...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCTCGGTGACGATGTCTaGGTGATGGACAGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVLGDDV*VMDRGG
Trigger: GCCACCTCTGTCCATCACCAAGACATCGTCACCGAG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGAAGGCACTGCGGTTATaGTCCAGTTCACGACAGGAG +
Preference number: 5 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRKALRL*SSSRQE
Trigger: CTCCTGTCGTGAACTGGACAATAACCGCAGTGCCTT...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGGTACTTCTCCTTGTTaGGGGTGCCCTCGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYGTSPC*GCPRWP
Trigger: GGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATGGTACTTCTCCTTGTTaGGGGTGCCCTCGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYGTSPC*GCPRWP
Trigger: GGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACC...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGACGTTCAAGACACGATaGGTGGCTGCTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQTFKTR*VAALRI
Trigger: GATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGT...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATTCCAGCGTGATCTGGTaGTCACCTGGGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYSSVIW*SPGSSW
Trigger: CCAGGAGGACCCAGGTGACAACCAGATCACGCTGGA...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTGCGCTCACCCTGGCGTaGATGTCCTCATTGCGGATG +
Preference number: 5 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSALTLA*MSSLRM
Trigger: CATCCGCAATGAGGACATCAACGCCAGGGTGAGCGC...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCGCCCCCTGGTGATCTaGCCCTTTTCAGACATGGGC +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYRPLVI*PFSDMG
Trigger: GCCCATGTCTGAAAAGGGCAAGATCACCAGGGGGCG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTCTTGGCCGGATCCTTaGGCTTCCTCCTCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: FYRNLRTRTICILGEAHTSWPDP*ASSSVL
Trigger: AAGCACGGAGGAGGAAGCCAAAGGATCCGGCCAAGA...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCTTCTTTCTCCGCTaGCTATCCCCCTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVPFFLR*LSPSDP
Trigger: GGGATCTGAGGGGGATAGCAAGCGGAGAAAGAAGGG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 90 bp GAATCGAGAAATCTGGCACCACTACTATTATCATCACAGCTACTATaGTTTCAGGGATCCCAGCAGTATTCCTGTGCTTCTCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: ESRNLAPLLLSSQLL*FQGSQQYSCASLRK
Trigger: TTTCCTGAGAGAAGCACAGGAATACTGCTGGGATCCCTGAAAGCATAGTAGCTGTGATGATAATAGTAGTGGTGCCAGATTTCTCGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS-3UTR CAA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTTCTGGGTCGTTGCGTaGCTCTGGCAGCAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSFWVVA*LWQQRC
Trigger: ACACCTCTGCTGCCAGAGCAACGCAACGACCCAGAA...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCCCTCATCTGGAATCTaGTTGGTGAAGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYPSSGI*LVKLLD
Trigger: GTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATACGTTCAAGACACGATaGGTGGCTGCTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYTFKTR*VAALRI
Trigger: GATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGT...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAAGAGTCCTGATGATGTaGGCTGCAGCCTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLARVLMM*AAAFRS
Trigger: GGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCT...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAGAGGTTAAGTGACTTGGCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAGAACAAGGACGATTaGTATTCTTGGAGAAGCACA +
Preference number: 5 (lower is better)
Translates to: SERLSDLAELMKQVKLAIKNKDD*YSWRST
Trigger: TGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTT...GATTGCCAGCTTTACCTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATATGCGCTCATTGTCCTaGAGCAGGGATGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDMRSLS*SRDVIS
Trigger: AGAGATCACATCCCTGCTCAAGGACAATGAGCGCAT...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGCAAGTGATCTATGTCTaGGCCGGATCCTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRQVIYV*AGSFGF
Trigger: GAAGCCAAAGGATCCGGCCAAGACATAGATCACTTG...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATAACGAGATGGCAGCATaGGTACGAGGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYNEMAA*VRGVWF
Trigger: GAACCACACCCCTCGTACCAATGCTGCCATCTCGTT...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCTGAGCTCATGAAGCAGGTAAAGCTGGCAATCAAAATCAGCTGGCAGTCAAAAGGAAAAGTGACATTTTaGTGTTCCCGACTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: AELMKQVKLAIKISWQSKGKVTF*CSRLSV
Trigger: CACTGAAAGTCGGGAACACAAAAATGTCACTTTTCC...TTTTGACTGCCAGCTGATTTTGATTGCCAGCTTTACCTGCTTCATGAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCCCTTCTTTCTCCGCTaGCTATCCCCCTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYPFFLR*LSPSDP
Trigger: GGGATCTGAGGGGGATAGCAAGCGGAGAAAGAAGGG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGGAGAGGTTAAGTGACTaGGCTGAGCTCATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SETVQKFIFRFYRNLRTRERLSD*AELMKQ
Trigger: CTGCTTCATGAGCTCAGCCAAGTCACTTAACCTCTC...CCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATCTCTGGCATAATGTCTaGCCTAGGGTGTTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYLWHNV*PRVFWG
Trigger: GCCCCAAAACACCCTAGGCAAGACATTATGCCAGAG...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS-3UTR CAA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATACGTTCAAGACACGATaGGTGGCTGCTCTGCGGATC +
Preference number: 5 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHTFKTR*VAALRI
Trigger: GATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCCGATCACCTTGCATTaGAGCTCATCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYPITLH*SSSLVS
Trigger: TGAGACCAACGATGAGCTCAAATGCAAGGTGATCGG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCCGAGCCGCGGCTTCTaGAATCCAGATATACCATTC +
Preference number: 5 (lower is better)
Translates to: FYRNLRTRTICILGEAHTPSRGF*NPDIPF
Trigger: GAATGGTATATCTGGATTCAAGAAGCCGCGGCTCGG...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGGGCGCAGGAAATTGTaGACAAGGATGTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHGRRKL*TRMCSC
Trigger: GCAGCTGCACATCCTTGTCAACAATTTCCTGCGCCC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATGCTGGAGAAGCTGCTTaGGAAATTGACATCACCATC +
Preference number: 5 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDAGEAA*EIDITI
Trigger: GATGGTGATGTCAATTTCCAAAGCAGCTTCTCCAGC...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TCTGTTGTAGTGGAGCATGCCTGCCACTTCGGAGTTAACCTGTGTTTTCTATACCTCATCAAATATTCCTaGACTGAACGAATGAAACCC +
Preference number: 5 (lower is better)
Translates to: SVVVEHACHFGVNLCFLYLIKYS*TERMKP
Trigger: GGGTTTCATTCGTTCAGTCAAGGAATATTTGATGAG...GTATAGAAAACACAGGTTAACTCCGAAGTGGCAGGCATGCTCCACTACAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 90 bp GATTTAGTTGGTGATGTTTCAGTATCACCATCATCACTCTGGTTTTaGTCAATATCTGACTCCTCTCTCATGGAGACTTCTGAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: DLVGDVSVSPSSLWF*SISDSSLMETSELC
Trigger: GCAGAGCTCAGAAGTCTCCATGAGAGAGGAGTCAGATATTGATCAAAACCAGAGTGATGATGGTGATACTGAAACATCACCAACTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATAAGGCACTGCGGTTATaGTCCAGTTCACGACAGGAG +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYKALRL*SSSRQE
Trigger: CTCCTGTCGTGAACTGGACAATAACCGCAGTGCCTT...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCGATCACCTTGCATTaGAGCTCATCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVPITLH*SSSLVS
Trigger: TGAGACCAACGATGAGCTCAAATGCAAGGTGATCGG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATAGGAAGCCGATCACCTaGCATTTGAGCTCATCGTTG +
Preference number: 5 (lower is better)
Translates to: AEIHIPVLQESKNKDDLYRKPIT*HLSSSL
Trigger: CAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCT...ATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGGTCTGCTTAGAGACTTaGAGCCACGTCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQVCLET*SHVFLS
Trigger: GCTCAAAAAGACGTGGCTCAAAGTCTCTAAGCAGAC...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCCCGGGAGCAGAATATTGCGTTACCTTaGCTTGGTGCTCTATTTTGT +
Preference number: 5 (lower is better)
Translates to: SETKRICTVSSSTCPREQNIALP*LGALFC
Trigger: ACAAAATAGAGCACCAAGCAAAGGTAACGCAATATT...CTGCTCCCGGGGACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTCGCGAACCACTTGGTTaGCCATTTTGTGTTGTCCGA +
Preference number: 5 (lower is better)
Translates to: FYRNLRTRTICILGEAHTREPLG*PFCVVR
Trigger: TCGGACAACACAAAATGGCAAACCAAGTGGTTCGCG...AGTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAACCTTCTTAATTTTCTaGATGTCGCTGTCTTCATCG +
Preference number: 5 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLTFLIF*MSLSSS
Trigger: CGATGAAGACAGCGACATCAAGAAAATTAAGAAGGT...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCATCAGCGGGAAGATTaGTCAATGACTGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYHQRED*SMTGLQ
Trigger: CTGAAGTCCAGTCATTGACAAATCTTCCCGCTGATG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TGGGCGAAGTCTGAAACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTATTAAGCCATTATGTTTaGGAGTGGCTTGTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: WAKSETVQKFIFRFYRNLLSHYV*EWLVLG
Trigger: ACCAAGAACAAGCCACTCCAAAACATAATGGCTTAA...TAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTTTCAGACTTCGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 90 bp GCTTCTCTGAGATTCTTAAATCTGCCCTCAGATGACACAAGCTTTTaGAGCTTATCAATCAAAGCTTTAGTCTGCTTAGAGACTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ASLRFLNLPSDDTSF*SLSIKALVCLETLS
Trigger: GCTCAAAGTCTCTAAGCAGACTAAAGCTTTGATTGATAAGCTCCAAAAGCTTGTGTCATCTGAGGGCAGATTTAAGAATCTCAGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560286.1
ENST00000560334.5
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACGGATCACAAACTCCTaGTCTCCATTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLARITNS*SPFLWS
Trigger: AGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCG...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTTGCGTTACCTTTGCTaGGTGCTCTATTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYLRYLC*VLYFVG
Trigger: GCCTACAAAATAGAGCACCAAGCAAAGGTAACGCAA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCAAGTGATCTATGTCTaGGCCGGATCCTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYQVIYV*AGSFGF
Trigger: GAAGCCAAAGGATCCGGCCAAGACATAGATCACTTG...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCATTGAGACCTGCGATTTaGGCTGGAGAAGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLALRPAI*AGEAAL
Trigger: CAAAGCAGCTTCTCCAGCCAAAATCGCAGGTCTCAA...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGACACATGGGGAGTTTaGAGACCTGCGATTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYDTWGV*RPAILA
Trigger: AGCCAAAATCGCAGGTCTCAAAACTCCCCATGTGTC...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp AACGGTGCAGAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTGCTTACAGCAAAAGTaGTCTGTCTGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: NGAEIHIPVLQESKNKDDCLQQK*SVCCSG
Trigger: TCCACTACAACAGACAGACAACTTTTGCTGTAAGCA...ATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTCTGCACCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCCAGTTTCATCCATCCTaGTCCGAAGAACTCCTCATA +
Preference number: 5 (lower is better)
Translates to: EENPVKPNEYVQYHLAHVQFHPS*SEELLI
Trigger: TATGAGGAGTTCTTCGGACAAGGATGGATGAAACTG...GACATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAGTCTGCTTAGAGACTTaGAGCCACGTCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAVCLET*SHVFLS
Trigger: GCTCAAAAAGACGTGGCTCAAAGTCTCTAAGCAGAC...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATGTCTGCTTAGAGACTTaGAGCCACGTCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHVCLET*SHVFLS
Trigger: GCTCAAAAAGACGTGGCTCAAAGTCTCTAAGCAGAC...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp TTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGATTTGTAGGCAGTTTGTaGAAACTGGCGAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: FIFRFYRNLRTRTICILGFVGSL*KLANLS
Trigger: CGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAA...TCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCACATACTTGGTTTGCCATTTaGTGTTGTCCGAACTCCGCT +
Preference number: 5 (lower is better)
Translates to: EEENPVKPNEYVQYHLAHTWFAI*CCPNSA
Trigger: AGCGGAGTTCGGACAACACAAAATGGCAAACCAAGT...ATGTGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGGAGTCTAAGATTCTaGTATGCAAGGGTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYWSLRF*YARVLF
Trigger: AAACAGCACCCTTGCATACAAGAATCTTAGACTCCA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATAAGCTGCTTTGGAAATaGACATCACCATCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: EAHTEEENPVKPNEYVQYKLLWK*TSPSAG
Trigger: TCCCGCTGATGGTGATGTCAATTTCCAAAGCAGCTT...ATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACCCTCATCCAGTTGTATaGAGACTGCTATTCATGCTA +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYPHPVV*RLLFML
Trigger: TAGCATGAATAGCAGTCTCAATACAACTGGATGAGG...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAAAGAGTCGACGTGGCTaGGTGTTTGTGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAKSRRG*VFVTPF
Trigger: AAATGGAGTCACAAACACCAAGCCACGTCGACTCTT...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GAAATTCATATTCCGGTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTAAGAGTCGACGTGGCTaGGTGTTTGTGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: EIHIPVLQESKNKDDLYSKSRRG*VFVTPF
Trigger: AAATGGAGTCACAAACACCAAGCCACGTCGACTCTT...AGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAACCGGAATATGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTGCTTACAGCAAAAGTaGTCTGTCTGTTGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYCLQQK*SVCCSG
Trigger: TCCACTACAACAGACAGACAACTTTTGCTGTAAGCA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTTTGTAGGCAGTTTGTaGAAACTGGCGAATCTCTCG +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYFVGSL*KLANLS
Trigger: CGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATTTTGTAGGCAGTTaGTTGAAACTGGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: GEAHTEEENPVKPNEYVQYFVGS*LKLANL
Trigger: GAGATTCGCCAGTTTCAACAAACTGCCTACAAAATA...CTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp GTTCTACAGGAATCTAAGAACAAGGACGATTTGTATTCTTGGAGAAGCACATACTATTTTGTAGGCAGTTaGTTGAAACTGGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: VLQESKNKDDLYSWRSTYYFVGS*LKLANL
Trigger: GAGATTCGCCAGTTTCAACAAACTGCCTACAAAATA...GTATGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTTAGATTCCTGTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ATTCTTGGAGAAGCACATACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATTATTTTGTAGGCAGTTaGTTGAAACTGGCGAATCTC +
Preference number: 5 (lower is better)
Translates to: ILGEAHTEEENPVKPNEYYFVGS*LKLANL
Trigger: GAGATTCGCCAGTTTCAACAAACTGCCTACAAAATA...ATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGTATGTGCTTCTCCAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS-3UTR CAA 90 bp ACTGAAGAAGAAAATCCAGTGAAACCAAACGAATATGTACAGTATCATCTAGCAAAGAACAAGGACGATTaGTATTCTTGGAGAAGCACA +
Preference number: 5 (lower is better)
Translates to: TEEENPVKPNEYVQYHLAKNKDD*YSWRST
Trigger: TGTGCTTCTCCAAGAATACAAATCGTCCTTGTTCTT...TGCTAGATGATACTGTACATATTCGTTTGGTTTCACTGGATTTTCTTCTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp GCGGCGGCAGACGAGGAAGCCAGCCATGTGAGGAGGTaGATGGAGTGGTGCCCCGGGGGCGGACGGACGGAC +
Preference number: 6 (lower is better)
Translates to: AAADEEASHVRR*MEWCPGGGRTD
Trigger: GTCCGTCCGTCCGCCCCCGGGGCACCACTCCATCCACCTCCTCACATGGCTGGCTTCCTCGTCTGCCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559926.1
ENST00000560334.5
CDS GCA 72 bp TCCGCTTGCTCAGGTAGCCTTTGCGCGTGCCGTCCTTaGGCGCCAGCAGTCCCAGGGACGCGACGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: SACSGSLCACRP*APAVPGTRRGH
Trigger: ATGGCCACGTCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 72 bp TGTCCGAACTCCGCTTGCTCAGGTAGCCTTTGCGCGTaGCGTCCTTGCGCGCCAGCAGTCCCAGGGACGCGA +
Preference number: 6 (lower is better)
Translates to: CPNSACSGSLCA*RPCAPAVPGTR
Trigger: TCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp TGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTTGCTATaGCAAAGGCAGAGGCGGCCGACAAGGCACTGCGGT +
Preference number: 6 (lower is better)
Translates to: CLGCPRWPRRLL*QRQRRPTRHCG
Trigger: ACCGCAGTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp CCGTCCTTGCGCGCCAGCAGTCCCAGGGACGCGACGTaGCCATCATTCAGCCGGATCCCCTTCTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: PSLRASSPRDAT*PSFSRIPFCMV
Trigger: CACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACGTCGCGTCCCTGGGACTGCTGGCGCGCAAGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CAA 90 bp GGGATGTTCAGGGAGAGCTTCCGCCGGCGGCTCGGTGACGATGTCTaGGTGATGGACAGAGGTGGCGGCGAGGAGAACTTGCGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: GMFRESFRRRLGDDV*VMDRGGGEENLRVA
Trigger: CGCCACCCGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCTCCCTGAACATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp AGAGCTTCCGCCGGCGGCTCGGTGACGATGTCTTGGTaGTGGACAGAGGTGGCGGCGAGGAGAACTTGCGGG +
Preference number: 6 (lower is better)
Translates to: RASAGGSVTMSW*WTEVAARRTCG
Trigger: CCCGCAAGTTCTCCTCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp GGGGATGTTCAGGGAGAGCTTCCGCCGGCGGCTCGGTaGCGATGTCTTGGTGATGGACAGAGGTGGCGGCGA +
Preference number: 6 (lower is better)
Translates to: GDVQGELPPAAR*RCLGDGQRWRR
Trigger: TCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCTCCCTGAACATCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp GTCCTTGACAAGGGCGCTCTTCACCTCCCGGGCCTCTaGCCAGCCCACATGGAGGCAGAAGGCAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VLDKGALHLPGL*PAHMEAEGRAP
Trigger: AGGAGCCCTGCCTTCTGCCTCCATGTGGGCTGGTCAGAGGCCCGGGAGGTGAAGAGCGCCCTTGTCAAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561112.1
CDS GCA 72 bp CTCCTTGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTTaGTATGGCAAAGGCAGAGGCGGCCGACAAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLVWGALVGPGG*YGKGRGGRQGT
Trigger: AGTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp GCGGCGAGGAGAACTTGCGGGTGGCGCGCGGGGACTTaGGGGGTTCACCGTACAGGAGCTTATTGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: AARRTCGWRAGT*GVHRTGAYCSG
Trigger: GCCAGAACAATAAGCTCCTGTACGGTGAACCCCCCAAGTCCCCGCGCGCCACCCGCAAGTTCTCCTCGCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp TCTCCTTGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTaGCTATGGCAAAGGCAGAGGCGGCCGACAAGGCAC +
Preference number: 6 (lower is better)
Translates to: SPCLGCPRWPRR*LWQRQRRPTRH
Trigger: GTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp GTCCTCTACCCCAGCACTCCTACTTGGGGCTGTCCTTaGCAAGGGCGCTCTTCACCTCCCGGGCCTCTGACC +
Preference number: 6 (lower is better)
Translates to: VLYPSTPTWGCP*QGRSSPPGPLT
Trigger: GGTCAGAGGCCCGGGAGGTGAAGAGCGCCCTTGTCAAGGACAGCCCCAAGTAGGAGTGCTGGGGTAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561112.1
CDS GCA 72 bp TGGGTCCTCCTGGGTCAGAGTCCTGATGATGTTGGCTaGAGCCTTCCGCTCCTGGGTCAGGAGCTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: WVLLGQSPDDVG*SLPLLGQELRV
Trigger: GACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCTGACCCAGGAGGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS GCA 72 bp TTGTGTTGTCCGAACTCCGCTTGCTCAGGTAGCCTTTaGGCGTGCCGTCCTTGCGCGCCAGCAGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LCCPNSACSGSL*ACRPCAPAVPG
Trigger: CCCTGGGACTGCTGGCGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS GCA 72 bp GAGGAAGCCAGCCATGTGAGGAGGTGGATGGAGTGGTaGCCCGGGGGCGGACGGACGGACAAGTTGGTGAAT +
Preference number: 6 (lower is better)
Translates to: EEASHVRRWMEW*PGGGRTDKLVN
Trigger: ATTCACCAACTTGTCCGTCCGTCCGCCCCCGGGGCACCACTCCATCCACCTCCTCACATGGCTGGCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559926.1
ENST00000560334.5
CDS GCA 72 bp CCGAGGCCCGGGGATCAGGCCCACACTCCAACATGCTaGCCAACAGGGCTCCAGAATTGCCTTCCCTTGGGA +
Preference number: 6 (lower is better)
Translates to: PRPGDQAHTPTC*PTGLQNCLPLG
Trigger: TCCCAAGGGAAGGCAATTCTGGAGCCCTGTTGGGCAGCATGTTGGAGTGTGGGCCTGATCCCCGGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp TCCCCGAGGCCCGGGGATCAGGCCCACACTCCAACATaGTGCCCAACAGGGCTCCAGAATTGCCTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: SPRPGDQAHTPT*CPTGLQNCLPL
Trigger: CAAGGGAAGGCAATTCTGGAGCCCTGTTGGGCAGCATGTTGGAGTGTGGGCCTGATCCCCGGGCCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CCA 72 bp TCCTCCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTTaGCCCCGGCGGTTGCTATGGCAAAGGCAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: SSGTSPCLGCPR*PRRLLWQRQRR
Trigger: CCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp CGACGTGGCCATCATTCAGCCGGATCCCCTTCTGCATaGTGCTCAGAGGCCAGCGAGACCCCACGCGCTTAC +
Preference number: 6 (lower is better)
Translates to: RRGHHSAGSPSA*CSEASETPRAY
Trigger: GTAAGCGCGTGGGGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp AGGGAGAGCTTCCGCCGGCGGCTCGGTGACGATGTCTaGGTGATGGACAGAGGTGGCGGCGAGGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: RESFRRRLGDDV*VMDRGGGEENL
Trigger: CAAGTTCTCCTCGCCGCCACCTCTGTCCATCACCAAGACATCGTCACCGAGCCGCCGGCGGAAGCTCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp GGGCTCCAGAATTGCCTTCCCTTGGGATCTGGGGGCCTCCTGTGTTaGGGCACCTTGCCCCTGAACTCCTCAGGAGTTGGGCACGGGTCC +
Preference number: 6 (lower is better)
Translates to: GLQNCLPLGSGGLLC*GTLPLNSSGVGHGS
Trigger: GGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAAGGTGCCCAAACACAGGAGGCCCCCAGATCCCAAGGGAAGGCAATTCTGGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp TCCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTaGCTATGGCAAAGGCAGAGGCGGCCGACAAGGCACTGCGGTTAT +
Preference number: 6 (lower is better)
Translates to: SGTSPCLGCPRWPRR*LWQRQRRPTRHCGY
Trigger: ATAACCGCAGTGCCTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp GCTAAGGACATCCTCCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTaGGCCCCGGCGGTTGCTATGGCAAAGGCAGAGGCGGCCGACAAG +
Preference number: 6 (lower is better)
Translates to: AKDILRYFSLFGVPS*APAVAMAKAEAADK
Trigger: CTTGTCGGCCGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp TGCTGTCAGCATGGGGTGACCGGATGTAGTCCTGGATaGTGGTCTTCCACTTCCGCCGGCACAGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: CCQHGVTGCSPG*WSSTSAGTASP
Trigger: GGGGCTGGCTGTGCCGGCGGAAGTGGAAGACCATCATCCAGGACTACATCCGGTCACCCCATGCTGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp CGTGGCCATCATTCAGCCGGATCCCCTTCTGCATGGTaGTCAGAGGCCAGCGAGACCCCACGCGCTTACATC +
Preference number: 6 (lower is better)
Translates to: RGHHSAGSPSAW*SEASETPRAYI
Trigger: GATGTAAGCGCGTGGGGTCTCGCTGGCCTCTGAGCACCATGCAGAAGGGGATCCGGCTGAATGATGGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp CAAGCGACCTCGCCAGGCCCAGCGCACACATCAGGCTaGAGCAGAGTTTCGGTGGCTGGAGTTTGTCTGACC +
Preference number: 6 (lower is better)
Translates to: QATSPGPAHTSG*SRVSVAGVCLT
Trigger: GGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCGCTGGGCCTGGCGAGGTCGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 72 bp ATCCTCCGGTACTTCTCCTTGTTTGGGGTGCCCTCGTaGGCCCCGGCGGTTGCTATGGCAAAGGCAGAGGCG +
Preference number: 6 (lower is better)
Translates to: ILRYFSLFGVPS*APAVAMAKAEA
Trigger: CGCCTCTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp CCTGCACTGGCTAAGGACATCCTCCGGTACTTCTCCTaGTTTGGGGTGCCCTCGTTGGCCCCGGCGGTTGCT +
Preference number: 6 (lower is better)
Translates to: PALAKDILRYFS*FGVPSLAPAVA
Trigger: AGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAGCCAGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp CGCTCGATCTCGATCTCCCCATCCTCGATCTGCTGCCGAAGCTGCTaGGCCACGGTCTTCTCTGTCTCCACGATCTGCAGCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RSISISPSSICCRSC*ATVFSVSTICSRCR
Trigger: CCTGCACCTGCTGCAGATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp CCCAGCGCACACATCAGGCTGGAGCAGAGTTTCGGTGGCTGGAGTTaGTCTGACCCATGGAGCACCCCGGGTCAAGCCTGGCTTTGTGCA +
Preference number: 6 (lower is better)
Translates to: PSAHIRLEQSFGGWS*SDPWSTPGQAWLCA
Trigger: TGCACAAAGCCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS TCA 72 bp CAGGCTGGAGCAGAGTTTCGGTGGCTGGAGTTTGTCTaGCCCATGGAGCACCCCGGGTCAAGCCTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: QAGAEFRWLEFV*PMEHPGSSLAL
Trigger: CAAAGCCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp GCAGCCTTCCGCTCCTGGGTCAGGAGCTCCGGGTCGTaGATGACTTCTTCCAGGAAGCCGATCACCTTGCAT +
Preference number: 6 (lower is better)
Translates to: AAFRSWVRSSGS*MTSSRKPITLH
Trigger: ATGCAAGGTGATCGGCTTCCTGGAAGAAGTCATGCACGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS GCA 72 bp AGCCGCTCGATCTCGATCTCCCCATCCTCGATCTGCTaGCGAAGCTGCTTGGCCACGGTCTTCTCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SRSISISPSSIC*RSCLATVFSVS
Trigger: GGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp GCTCCTCCAGTTTGGACTTGGCGTAGTCCAGGCTGTTaGGCTCAACGTGCTCATGAGGCGTGTGGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: APPVWTWRSPGC*AQRAHEACGPG
Trigger: TCCTGGCCCACACGCCTCATGAGCACGTTGAGCGCAACAGCCTGGACTACGCCAAGTCCAAACTGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp TGGCTGGAGAAGAGGAAGCTCCACAGCAAAGGGCTTTaGCAAGCGACCTCGCCAGGCCCAGCGCACACATCA +
Preference number: 6 (lower is better)
Translates to: WLEKRKLHSKGL*QATSPGPAHTS
Trigger: TGATGTGTGCGCTGGGCCTGGCGAGGTCGCTTGGCAAAGCCCTTTGCTGTGGAGCTTCCTCTTCTCCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CCA 72 bp GTGTTTGGGCACCTTGCCCCTGAACTCCTCAGGAGTTaGGCACGGGTCCTTGTTGAGTGTGCCTGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: VFGHLAPELLRS*ARVLVECACAP
Trigger: GGGAGCACAGGCACACTCAACAAGGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAAGGTGCCCAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CCA 72 bp CATGCTGCCCAACAGGGCTCCAGAATTGCCTTCCCTTaGGATCTGGGGGCCTCCTGTGTTTGGGCACCTTGC +
Preference number: 6 (lower is better)
Translates to: HAAQQGSRIAFP*DLGASCVWAPC
Trigger: GCAAGGTGCCCAAACACAGGAGGCCCCCAGATCCCAAGGGAAGGCAATTCTGGAGCCCTGTTGGGCAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 72 bp CACTGGCTAAGGACATCCTCCGGTACTTCTCCTTGTTaGGGGTGCCCTCGTTGGCCCCGGCGGTTGCTATGG +
Preference number: 6 (lower is better)
Translates to: HWLRTSSGTSPC*GCPRWPRRLLW
Trigger: CCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp CACATCAGGCTGGAGCAGAGTTTCGGTGGCTGGAGTTaGTCTGACCCATGGAGCACCCCGGGTCAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: HIRLEQSFGGWS*SDPWSTPGQAW
Trigger: CCAGGCTTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp GAAACCCTGCACTGGCTAAGGACATCCTCCGGTACTTCTCCTTGTTaGGGGTGCCCTCGTTGGCCCCGGCGGTTGCTATGGCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: ETLHWLRTSSGTSPC*GCPRWPRRLLWQRQ
Trigger: CTGCCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAGCCAGTGCAGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp CAACATGGTGAGGCCCATAGCAGGACTCCTTCTCTGGGGAGGTCATaGGCTATGCCCATGGACTGCCACCTCGCTACTCTTGCCCCCGTC +
Preference number: 6 (lower is better)
Translates to: QHGEAHSRTPSLGRS*AMPMDCHLATLAPV
Trigger: GACGGGGGCAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTATGGGCCTCACCATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS GCA 72 bp GCTCTGAACCAGCCTCTTTGTTCTGCAGGGCACTGCTaGTGGGAAAGGAAGGACACTGTCTGCTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: ALNQPLCSAGHC*WERKDTVCWAP
Trigger: AGGGGCCCAGCAGACAGTGTCCTTCCTTTCCCAGCAGCAGTGCCCTGCAGAACAAAGAGGCTGGTTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS GCA 72 bp CTGGCTCTGAACCAGCCTCTTTGTTCTGCAGGGCACTaGTGCTGGGAAAGGAAGGACACTGTCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LALNQPLCSAGH*CWERKDTVCWA
Trigger: GGCCCAGCAGACAGTGTCCTTCCTTTCCCAGCAGCAGTGCCCTGCAGAACAAAGAGGCTGGTTCAGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS GCA 72 bp CTAAGGACATCCTCCGGTACTTCTCCTTGTTTGGGGTaGCCTCGTTGGCCCCGGCGGTTGCTATGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: LRTSSGTSPCLG*PRWPRRLLWQR
Trigger: CCTTTGCCATAGCAACCGCCGGGGCCAACGAGGGCACCCCAAACAAGGAGAAGTACCGGAGGATGTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp TTCAGCCGCTCGATCTCGATCTCCCCATCCTCGATCTaGTGCCGAAGCTGCTTGGCCACGGTCTTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: FSRSISISPSSI*CRSCLATVFSV
Trigger: GACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGATCGAGCGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp ATTGGCTATGCCCATGGACTGCCACCTCGCTACTCTTaGCCCCGTCCCCTGCCTAGTGAAACAGACGCTCAG +
Preference number: 6 (lower is better)
Translates to: IGYAHGLPPRYS*PRPLPSETDAQ
Trigger: CTGAGCGTCTGTTTCACTAGGCAGGGGACGGGGGCAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS GCA 72 bp ATAGCAGGACTCCTTCTCTGGGGAGGTCATTGGCTATaGCCATGGACTGCCACCTCGCTACTCTTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: IAGLLLWGGHWL*PWTATSLLLPP
Trigger: CGGGGGCAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CCA 72 bp AGAGTCCTGATGATGTTGGCTGCAGCCTTCCGCTCCTaGGTCAGGAGCTCCGGGTCGTGCATGACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: RVLMMLAAAFRS*VRSSGSCMTSS
Trigger: GGAAGAAGTCATGCACGACCCGGAGCTCCTGACCCAGGAGCGGAAGGCTGCAGCCAACATCATCAGGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CCA 72 bp CCTTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCCTGGGTCAGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: PSAICVISSSVI*LSPGSSWVRVL
Trigger: CAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CCA 72 bp CCGCGGCTTCTTGAATCCAGATATACCATTCCCCGCTaGAACCTCTTCTCCGCTCCGCAGAGCCCCAGTACC +
Preference number: 6 (lower is better)
Translates to: PRLLESRYTIPR*NLFSAPQSPST
Trigger: GGTACTGGGGCTCTGCGGAGCGGAGAAGAGGTTCCAGCGGGGAATGGTATATCTGGATTCAAGAAGCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp GGAAGGTCTCCAGCGTCCTCTCCTCGCAGTCAGGCTTaGCCTCGTAGTGCTTCAGCAGCTTGTCGAAGTCAC +
Preference number: 6 (lower is better)
Translates to: GRSPASSPRSQA*PRSASAACRSH
Trigger: GTGACTTCGACAAGCTGCTGAAGCACTACGAGGCCAAGCCTGACTGCGAGGAGAGGACGCTGGAGACCTTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp CCTTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTaGTTGTCACCTGGGTCCTCCTGGGTCAGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: PSAICVISSSVI*LSPGSSWVRVL
Trigger: GAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561112.1
CDS CCA 72 bp GACGAACAGACAGACAGAAAGACCTCCTGCTCTGGCTaGGGGCGGCACGTGAATGCCTCTGCAATGCAGGTC +
Preference number: 6 (lower is better)
Translates to: DEQTDRKTSCSG*GRHVNASAMQV
Trigger: GACCTGCATTGCAGAGGCATTCACGTGCCGCCCCCAGCCAGAGCAGGAGGTCTTTCTGTCTGTCTGTTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560286.1
ENST00000623620.1
CDS CCA 72 bp AGCGCACACATCAGGCTGGAGCAGAGTTTCGGTGGCTaGAGTTTGTCTGACCCATGGAGCACCCCGGGTCAA +
Preference number: 6 (lower is better)
Translates to: SAHIRLEQSFGG*SLSDPWSTPGQ
Trigger: TTGACCCGGGGTGCTCCATGGGTCAGACAAACTCCAGCCACCGAAACTCTGCTCCAGCCTGATGTGTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp GGCACCTTGCCCCTGAACTCCTCAGGAGTTGGGCACGGGTCCTTGTaGAGTGTGCCTGTGCTCCCACATCTCTCAGAAGCAAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: GTLPLNSSGVGHGSL*SVPVLPHLSEARKW
Trigger: CCACTTCCTTGCTTCTGAGAGATGTGGGAGCACAGGCACACTCAACAAGGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp TCAGCCAAGGCCATAGGGCTGAGAGCTGGCTCTGAACCAGCCTCTTaGTTCTGCAGGGCACTGCTGCTGGGAAAGGAAGGACACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SAKAIGLRAGSEPAS*FCRALLLGKEGHCL
Trigger: CAGACAGTGTCCTTCCTTTCCCAGCAGCAGTGCCCTGCAGAACAAAGAGGCTGGTTCAGAGCCAGCTCTCAGCCCTATGGCCTTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CAA 90 bp TCTTCATCGTTGGGGGCGACAGTCTGGGTGGACTGGATGCGCTCATaGTCCTTGAGCAGGGATGTGATCTCTGCCTTCAGCCGCTCGATC +
Preference number: 6 (lower is better)
Translates to: SSSLGATVWVDWMRS*SLSRDVISAFSRSI
Trigger: GATCGAGCGGCTGAAGGCAGAGATCACATCCCTGCTCAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp TTGGGCACCTTGCCCCTGAACTCCTCAGGAGTTGGGCACGGGTCCTaGTTGAGTGTGCCTGTGCTCCCACATCTCTCAGAAGCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGTLPLNSSGVGHGS*LSVPVLPHLSEARK
Trigger: CTTCCTTGCTTCTGAGAGATGTGGGAGCACAGGCACACTCAACAAGGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAAGGTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS TCA 72 bp GAGCTTGCTGGTGTCCAGCGTGGCCTTGCTGAAGGGTaGCATGGCCGAGTACATGCTGGTGTAGCCATTGGA +
Preference number: 6 (lower is better)
Translates to: ELAGVQRGLAEG*HGRVHAGVAIG
Trigger: TCCAATGGCTACACCAGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGGACACCAGCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp TCAGGATGTACCTGGGGATCTGGAACATGGGGTAGGTaGGGAAGGTCTCCAGCGTCCTCTCCTCGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: SGCTWGSGTWGR*GRSPASSPRSQ
Trigger: CTGACTGCGAGGAGAGGACGCTGGAGACCTTCCTCACCTACCCCATGTTCCAGATCCCCAGGTACATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp TCCCGAGACCTGGGCAGTTTAGAAGGACTTAGTGGGTaGCTCCCAGGAGCCTGCGCTCAGAGCAGGAAATGG +
Preference number: 6 (lower is better)
Translates to: SRDLGSLEGLSG*LPGACAQSRKW
Trigger: CCATTTCCTGCTCTGAGCGCAGGCTCCTGGGAGTCACCCACTAAGTCCTTCTAAACTGCCCAGGTCTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS TCA 72 bp GAAGCAGAAGCATTTACTAACACACAGCACACGCTGTaGTCCCCGAGGCCCGGGGATCAGGCCCACACTCCA +
Preference number: 6 (lower is better)
Translates to: EAEAFTNTQHTL*SPRPGDQAHTP
Trigger: TGGAGTGTGGGCCTGATCCCCGGGCCTCGGGGATCACAGCGTGTGCTGTGTGTTAGTAAATGCTTCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp GGGAACAGAAGAGGGAACGGGTGTATTCTGGGTCGTTaGGTTGCTCTGGCAGCAGAGGTGTGGATTGGGGGA +
Preference number: 6 (lower is better)
Translates to: GNRRGNGCILGR*VALAAEVWIGG
Trigger: TCCCCCAATCCACACCTCTGCTGCCAGAGCAACGCAACGACCCAGAATACACCCGTTCCCTCTTCTGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS GCA 72 bp ATCTCGATCTCCCCATCCTCGATCTGCTGCCGAAGCTaGTTGGCCACGGTCTTCTCTGTCTCCACGATCTGC +
Preference number: 6 (lower is better)
Translates to: ISISPSSICCRS*LATVFSVSTIC
Trigger: GCAGATCGTGGAGACAGAGAAGACCGTGGCCAAGCAGCTTCGGCAGCAGATCGAGGATGGGGAGATCGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp AGGCCCATAGCAGGACTCCTTCTCTGGGGAGGTCATTaGCTATGCCCATGGACTGCCACCTCGCTACTCTTG +
Preference number: 6 (lower is better)
Translates to: RPIAGLLLWGGH*LCPWTATSLLL
Trigger: CAAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTATGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CAA 72 bp AGGGAACAGAAGAGGGAACGGGTGTATTCTGGGTCGTaGCGTTGCTCTGGCAGCAGAGGTGTGGATTGGGGG +
Preference number: 6 (lower is better)
Translates to: REQKRERVYSGS*RCSGSRGVDWG
Trigger: CCCCCAATCCACACCTCTGCTGCCAGAGCAACGCAACGACCCAGAATACACCCGTTCCCTCTTCTGTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CAA 72 bp GCAAAGGCAGAGGCGGCCGACAAGGCACTGCGGTTATaGTCCAGTTCACGACAGGAGGTCATGACGACTCCA +
Preference number: 6 (lower is better)
Translates to: AKAEAADKALRL*SSSRQEVMTTP
Trigger: TGGAGTCGTCATGACCTCCTGTCGTGAACTGGACAATAACCGCAGTGCCTTGTCGGCCGCCTCTGCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp TCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTGGTaGTCACCTGGGTCCTCCTGGGTCAGAGTCCTGATG +
Preference number: 6 (lower is better)
Translates to: SAICVISSSVIW*SPGSSWVRVLM
Trigger: CATCAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CAA 72 bp TTGGGGGCGACAGTCTGGGTGGACTGGATGCGCTCATaGTCCTTGAGCAGGGATGTGATCTCTGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LGATVWVDWMRS*SLSRDVISAFS
Trigger: GCTGAAGGCAGAGATCACATCCCTGCTCAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp GAGGCCCATAGCAGGACTCCTTCTCTGGGGAGGTCATaGGCTATGCCCATGGACTGCCACCTCGCTACTCTT +
Preference number: 6 (lower is better)
Translates to: EAHSRTPSLGRS*AMPMDCHLATL
Trigger: AAGAGTAGCGAGGTGGCAGTCCATGGGCATAGCCAATGACCTCCCCAGAGAAGGAGTCCTGCTATGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CAA 90 bp TTCACGCCTTCAGCCATCTGCGTGATCTCCTCCAGCGTGATCTGGTaGTCACCTGGGTCCTCCTGGGTCAGAGTCCTGATGATGTTGGCT +
Preference number: 6 (lower is better)
Translates to: FTPSAICVISSSVIW*SPGSSWVRVLMMLA
Trigger: AGCCAACATCATCAGGACTCTGACCCAGGAGGACCCAGGTGACAACCAGATCACGCTGGAGGAGATCACGCAGATGGCTGAAGGCGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CAA 90 bp CCCCAAATATCTACACTCCAGGATCTGGCGCCGAGCCGCGGCTTCTaGAATCCAGATATACCATTCCCCGCTGGAACCTCTTCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: PQISTLQDLAPSRGF*NPDIPFPAGTSSPL
Trigger: GAGCGGAGAAGAGGTTCCAGCGGGGAATGGTATATCTGGATTCAAGAAGCCGCGGCTCGGCGCCAGATCCTGGAGTGTAGATATTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 72 bp ACACATAGAGCTTGCTGGTGTCCAGCGTGGCCTTGCTaGAGGGTGACATGGCCGAGTACATGCTGGTGTAGC +
Preference number: 6 (lower is better)
Translates to: THRACWCPAWPC*RVTWPSTCWCS
Trigger: GCTACACCAGCATGTACTCGGCCATGTCACCCTTCAGCAAGGCCACGCTGGACACCAGCAAGCTCTATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp ATTAGGGGCCTGAGCCAATCCCTGAACTTGGCCTACTaGTGGACAGCCTTGGCCAAGTCCTTCATTGCCCCA +
Preference number: 6 (lower is better)
Translates to: IRGLSQSLNLAY*WTALAKSFIAP
Trigger: TGGGGCAATGAAGGACTTGGCCAAGGCTGTCCAGCAGTAGGCCAAGTTCAGGGATTGGCTCAGGCCCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS GCA 72 bp ACTTGGTTTGCCATTTTGTGTTGTCCGAACTCCGCTTaGTCAGGTAGCCTTTGCGCGTGCCGTCCTTGCGCG +
Preference number: 6 (lower is better)
Translates to: TWFAILCCPNSA*SGSLCACRPCA
Trigger: CGCGCAAGGACGGCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAATGGCAAACCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp TGGACACCCAGTGGCGGAGCACGTTCAAGACACGATTaGTGGCTGCTCTGCGGATCACAAACTCCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: WTPSGGARSRHD*WLLCGSQTPCL
Trigger: GAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCCACTGGGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp CTGTCTTCATCGTTGGGGGCGACAGTCTGGGTGGACTaGATGCGCTCATTGTCCTTGAGCAGGGATGTGATC +
Preference number: 6 (lower is better)
Translates to: LSSSLGATVWVD*MRSLSLSRDVI
Trigger: GATCACATCCCTGCTCAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp TTGATGTCGCTGTCTTCATCGTTGGGGGCGACAGTCTaGGTGGACTGGATGCGCTCATTGTCCTTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LMSLSSSLGATV*VDWMRSLSLSR
Trigger: CCTGCTCAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGACAGCGACATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp TGTCAAATAGGTCAGCCAGGACCAGCGTGGGCCAGCTaGAGATGCGGGCCTTCAGGCCTTGGTAAAAGATCT +
Preference number: 6 (lower is better)
Translates to: CQIGQPGPAWAS*RCGPSGLGKRS
Trigger: AGATCTTTTACCAAGGCCTGAAGGCCCGCATCTCCAGCTGGCCCACGCTGGTCCTGGCTGACCTATTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp AGTGGGTGTGAGGGACCTGAGTGTGGATTTGGCCCTTaGAAATGCTGCAGGATCCCGAGACCTGGGCAGTTT +
Preference number: 6 (lower is better)
Translates to: SGCEGPECGFGP*KCCRIPRPGQF
Trigger: AAACTGCCCAGGTCTCGGGATCCTGCAGCATTTCCAAGGGCCAAATCCACACTCAGGTCCCTCACACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 72 bp TCTACACTCCAGGATCTGGCGCCGAGCCGCGGCTTCTaGAATCCAGATATACCATTCCCCGCTGGAACCTCT +
Preference number: 6 (lower is better)
Translates to: STLQDLAPSRGF*NPDIPFPAGTS
Trigger: AGAGGTTCCAGCGGGGAATGGTATATCTGGATTCAAGAAGCCGCGGCTCGGCGCCAGATCCTGGAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp TTGCCCCTGAACTCCTCAGGAGTTGGGCACGGGTCCTaGTTGAGTGTGCCTGTGCTCCCACATCTCTCAGAA +
Preference number: 6 (lower is better)
Translates to: LPLNSSGVGHGS*LSVPVLPHLSE
Trigger: TTCTGAGAGATGTGGGAGCACAGGCACACTCAACAAGGACCCGTGCCCAACTCCTGAGGAGTTCAGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp GGGAGCAGCTGGGTCTGGGCTGGGCTCAGCTTCAGGTGGGGAGTTTaGGTTCTATTCGGAGAGAAGACTCGTAGAGGCTTTCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: GSSWVWAGLSFRWGV*VLFGEKTRRGFLHP
Trigger: TGGATGAAGAAAGCCTCTACGAGTCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCCAGCCCAGACCCAGCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CAA 90 bp AGAAGAGCAGGTTCTGCAGCAGCGCGAACCACTTGGTTTGCCATTTaGTGTTGTCCGAACTCCGCTTGCTCAGGTAGCCTTTGCGCGTGC +
Preference number: 6 (lower is better)
Translates to: RRAGSAAARTTWFAI*CCPNSACSGSLCAC
Trigger: GCACGCGCAAAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAATGGCAAACCAAGTGGTTCGCGCTGCTGCAGAACCTGCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS TCA 72 bp CTTTGCAGCTCTGTTCCTCAAGATTCAGAATGTGGCTaGGAAACCGCGGGAGCACAGCGGTACGTCACGCCA +
Preference number: 6 (lower is better)
Translates to: LCSSVPQDSECG*ETAGAQRYVTP
Trigger: TGGCGTGACGTACCGCTGTGCTCCCGCGGTTTCTCAGCCACATTCTGAATCTTGAGGAACAGAGCTGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp GGCGGAGCACGTTCAAGACACGATTGGTGGCTGCTCTaGGGATCACAAACTCCTTGTCTCCATTCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GGARSRHDWWLL*GSQTPCLHSSG
Trigger: ACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp CCAGTGGCGGAGCACGTTCAAGACACGATTGGTGGCTaGTCTGCGGATCACAAACTCCTTGTCTCCATTCCT +
Preference number: 6 (lower is better)
Translates to: PVAEHVQDTIGG*SADHKLLVSIP
Trigger: AGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp TGTGGCGAGGGTCCTGTAGCTGGCATGTGCAATGGCTaGCACCCATTCGTCACAATCTTTTGCGTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: CGEGPVAGMCNG*HPFVTIFCVLC
Trigger: ACAGAGGACGCAAAAGATTGTGACGAATGGGTGGCAGCCATTGCACATGCCAGCTACAGGACCCTCGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp ATGGACTGCCACCTCGCTACTCTTGCCCCCGTCCCCTaGCTAGTGAAACAGACGCTCAGTATTCATGCAACA +
Preference number: 6 (lower is better)
Translates to: MDCHLATLAPVP*LVKQTLSIHAT
Trigger: TGTTGCATGAATACTGAGCGTCTGTTTCACTAGGCAGGGGACGGGGGCAAGAGTAGCGAGGTGGCAGTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS GCA 72 bp GAGGGACCTGAGTGTGGATTTGGCCCTTGGAAATGCTaGAGGATCCCGAGACCTGGGCAGTTTAGAAGGACT +
Preference number: 6 (lower is better)
Translates to: EGPECGFGPWKC*RIPRPGQFRRT
Trigger: AGTCCTTCTAAACTGCCCAGGTCTCGGGATCCTGCAGCATTTCCAAGGGCCAAATCCACACTCAGGTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp TGTGAGGGACCTGAGTGTGGATTTGGCCCTTGGAAATaGTGCAGGATCCCGAGACCTGGGCAGTTTAGAAGG +
Preference number: 6 (lower is better)
Translates to: CEGPECGFGPWK*CRIPRPGQFRR
Trigger: CCTTCTAAACTGCCCAGGTCTCGGGATCCTGCAGCATTTCCAAGGGCCAAATCCACACTCAGGTCCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CCA 72 bp TCTGAGGGCTGGGATGGGCTGTCCACAACTGGGATCTaGGTAGGTGGCCTCTCGGAAAAGATAATCACCTAC +
Preference number: 6 (lower is better)
Translates to: SEGWDGLSTTGI*VGGLSEKIITY
Trigger: GTAGGTGATTATCTTTTCCGAGAGGCCACCTACCCAGATCCCAGTTGTGGACAGCCCATCCCAGCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CCA 72 bp GCTCTGCGGATCACAAACTCCTTGTCTCCATTCCTCTaGTCTGGGGGAAACCCTGCACTGGCTAAGGACATC +
Preference number: 6 (lower is better)
Translates to: ALRITNSLSPFL*SGGNPALAKDI
Trigger: GATGTCCTTAGCCAGTGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp GGGTCTGGGCTGGGCTCAGCTTCAGGTGGGGAGTTTTaGTTCTATTCGGAGAGAAGACTCGTAGAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: GSGLGSASGGEF*FYSERRLVEAF
Trigger: GAAAGCCTCTACGAGTCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCCAGCCCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CCA 72 bp GGAGTTTCTCTGGCAGACCATGGAGGACTCCACCATTaGGGTCCAGGAAATCTAGGGGTCTTGTGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: GVSLADHGGLHH*GPGNLGVLWVD
Trigger: GTCTACCCACAAGACCCCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560286.1
ENST00000623620.1
CDS CAA 72 bp ACACGATTGGTGGCTGCTCTGCGGATCACAAACTCCTaGTCTCCATTCCTCTGGTCTGGGGGAAACCCTGCA +
Preference number: 6 (lower is better)
Translates to: TRLVAALRITNS*SPFLWSGGNPA
Trigger: TGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp TTGGACACCCAGTGGCGGAGCACGTTCAAGACACGATaGGTGGCTGCTCTGCGGATCACAAACTCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LDTQWRSTFKTR*VAALRITNSLS
Trigger: AGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGTGCTCCGCCACTGGGTGTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp ACGGCCACCCACTTCTCGATGGCGCTCACCCTGGCGTaGATGTCCTCATTGCGGATGATTTCTGAAGCAATC +
Preference number: 6 (lower is better)
Translates to: TATHFSMALTLA*MSSLRMISEAI
Trigger: GATTGCTTCAGAAATCATCCGCAATGAGGACATCAACGCCAGGGTGAGCGCCATCGAGAAGTGGGTGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560286.1
ENST00000560334.5
ENST00000560943.5
CDS CAA 90 bp ACGTTCAAGACACGATTGGTGGCTGCTCTGCGGATCACAAACTCCTaGTCTCCATTCCTCTGGTCTGGGGGAAACCCTGCACTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: TFKTRLVAALRITNS*SPFLWSGGNPALAK
Trigger: CTTAGCCAGTGCAGGGTTTCCCCCAGACCAGAGGAATGGAGACAAGGAGTTTGTGATCCGCAGAGCAGCCACCAATCGTGTCTTGAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp TCCGGGTCGTGCATGACTTCTTCCAGGAAGCCGATCACCTTGCATTaGAGCTCATCGTTGGTCTCAAAGTCCTGCCGGGAAGGTGTGATG +
Preference number: 6 (lower is better)
Translates to: SGSCMTSSRKPITLH*SSSLVSKSCREGVM
Trigger: CATCACACCTTCCCGGCAGGACTTTGAGACCAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCTGGAAGAAGTCATGCACGACCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560943.5
CDS TCA 72 bp CAGGGGTCGTATCGCCCTCATCTGGAATCTTGTTGGTaGAGCTGCTGGACACATAGAGCTTGCTGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: QGSYRPHLESCW*SCWTHRACWCP
Trigger: TGGACACCAGCAAGCTCTATGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGGCGATACGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp TCTGTCTCCACGATCTGCAGCAGGTGCAGGTATTTCTaGATTAATGCCTCATGCTCTGTGGCGAGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: SVSTICSRCRYF*INASCSVARVL
Trigger: CAGGACCCTCGCCACAGAGCATGAGGCATTAATGCAGAAATACCTGCACCTGCTGCAGATCGTGGAGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp CTGGGATGGGCTGTCCACAACTGGGATCTGGGTAGGTaGCCTCTCGGAAAAGATAATCACCTACCATTCCTG +
Preference number: 6 (lower is better)
Translates to: LGWAVHNWDLGR*PLGKDNHLPFL
Trigger: CAGGAATGGTAGGTGATTATCTTTTCCGAGAGGCCACCTACCCAGATCCCAGTTGTGGACAGCCCATCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CCA 72 bp GTCTTCGGGCTTCTCAGGGGTCGTATCGCCCTCATCTaGAATCTTGTTGGTGAAGCTGCTGGACACATAGAG +
Preference number: 6 (lower is better)
Translates to: VFGLLRGRIALI*NLVGEAAGHIE
Trigger: CTCTATGTGTCCAGCAGCTTCACCAACAAGATTCCAGATGAGGGCGATACGACCCCTGAGAAGCCCGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CCA 72 bp GGTGCAGGTATTTCTGCATTAATGCCTCATGCTCTGTaGCGAGGGTCCTGTAGCTGGCATGTGCAATGGCTG +
Preference number: 6 (lower is better)
Translates to: GAGISALMPHAL*RGSCSWHVQWL
Trigger: CAGCCATTGCACATGCCAGCTACAGGACCCTCGCCACAGAGCATGAGGCATTAATGCAGAAATACCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp TGGGTCTGGGCTGGGCTCAGCTTCAGGTGGGGAGTTTaGGTTCTATTCGGAGAGAAGACTCGTAGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: WVWAGLSFRWGV*VLFGEKTRRGF
Trigger: AAAGCCTCTACGAGTCTTCTCTCCGAATAGAACCAAAACTCCCCACCTGAAGCTGAGCCCAGCCCAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp GGTTCTGCAGCAGCGCGAACCACTTGGTTTGCCATTTaGTGTTGTCCGAACTCCGCTTGCTCAGGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: GSAAARTTWFAI*CCPNSACSGSL
Trigger: AAGGCTACCTGAGCAAGCGGAGTTCGGACAACACAAAATGGCAAACCAAGTGGTTCGCGCTGCTGCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp TCCAGGAAGCCGATCACCTTGCATTTGAGCTCATCGTaGGTCTCAAAGTCCTGCCGGGAAGGTGTGATGGGT +
Preference number: 6 (lower is better)
Translates to: SRKPITLHLSSS*VSKSCREGVMG
Trigger: ACCCATCACACCTTCCCGGCAGGACTTTGAGACCAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560943.5
CDS CAA 72 bp TGGAGTTTCTCTGGCAGACCATGGAGGACTCCACCATaGGGGTCCAGGAAATCTAGGGGTCTTGTGGGTAGA +
Preference number: 6 (lower is better)
Translates to: WSFSGRPWRTPP*GSRKSRGLVGR
Trigger: TCTACCCACAAGACCCCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560286.1
ENST00000623620.1
CDS CAA 90 bp TGTAGCTGGCATGTGCAATGGCTGCCACCCATTCGTCACAATCTTTaGCGTCCTCTGTCCTCAGCTCCAAGGCTTTCTGGTTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: CSWHVQWLPPIRHNL*RPLSSAPRLSGSHG
Trigger: GCCATGAGAACCAGAAAGCCTTGGAGCTGAGGACAGAGGACGCAAAAGATTGTGACGAATGGGTGGCAGCCATTGCACATGCCAGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp AGCAAACTCTGGAGTTTCTCTGGCAGACCATGGAGGACTCCACCATaGGGGTCCAGGAAATCTAGGGGTCTTGTGGGTAGACAGACGAAC +
Preference number: 6 (lower is better)
Translates to: SKLWSFSGRPWRTPP*GSRKSRGLVGRQTN
Trigger: GTTCGTCTGTCTACCCACAAGACCCCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCCAGAGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS GCA 72 bp ACCTTGCATTTGAGCTCATCGTTGGTCTCAAAGTCCTaGCGGGAAGGTGTGATGGGTGGCTCTGGTTACTGT +
Preference number: 6 (lower is better)
Translates to: TLHLSSSLVSKS*REGVMGGSGYC
Trigger: ACAGTAACCAGAGCCACCCATCACACCTTCCCGGCAGGACTTTGAGACCAACGATGAGCTCAAATGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560943.5
CDS CCA 72 bp CTTCATCGTGCATTATTCTGGACAGCTCCTCCAGTTTaGACTTGGCGTAGTCCAGGCTGTTGCGCTCAACGT +
Preference number: 6 (lower is better)
Translates to: LHRALFWTAPPV*TWRSPGCCAQR
Trigger: ACGTTGAGCGCAACAGCCTGGACTACGCCAAGTCCAAACTGGAGGAGCTGTCCAGAATAATGCACGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp CATGTGCAATGGCTGCCACCCATTCGTCACAATCTTTaGCGTCCTCTGTCCTCAGCTCCAAGGCTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: HVQWLPPIRHNL*RPLSSAPRLSG
Trigger: ACCAGAAAGCCTTGGAGCTGAGGACAGAGGACGCAAAAGATTGTGACGAATGGGTGGCAGCCATTGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp AAGCTCTGCACCTTCTTAATTTTCTTGATGTCGCTGTCTTCATCGTaGGGGGCGACAGTCTGGGTGGACTGGATGCGCTCATTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: KLCTFLIFLMSLSSS*GATVWVDWMRSLSL
Trigger: CAAGGACAATGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGACAGCGACATCAAGAAAATTAAGAAGGTGCAGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp CAGCCTTGGCCAAGTCCTTCATTGCCCCATGACTTTTaGGAAGCAAAGGCTAAGGTGGCCTGCACTCCTTAT +
Preference number: 6 (lower is better)
Translates to: QPWPSPSLPHDF*EAKAKVACTPY
Trigger: ATAAGGAGTGCAGGCCACCTTAGCCTTTGCTTCTCAAAAGTCATGGGGCAATGAAGGACTTGGCCAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS TCA 72 bp TGTACTGGTGGTTGCGGACGAACTCTTGGTAGATGTTaGGCATGGGCAGCAGGATGTCAAATAGGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: CTGGCGRTLGRC*AWAAGCQIGQP
Trigger: TGGCTGACCTATTTGACATCCTGCTGCCCATGCTCAACATCTACCAAGAGTTCGTCCGCAACCACCAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS TCA 72 bp ACAGAAAGACCTCCTGCTCTGGCTGGGGGCGGCACGTaGATGCCTCTGCAATGCAGGTCTATGATTTTAAAA +
Preference number: 6 (lower is better)
Translates to: TERPPALAGGGT*MPLQCRSMILK
Trigger: TTTTAAAATCATAGACCTGCATTGCAGAGGCATTCACGTGCCGCCCCCAGCCAGAGCAGGAGGTCTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560286.1
ENST00000623620.1
CDS CCA 72 bp AATGCTAGCAAACTCTGGAGTTTCTCTGGCAGACCATaGAGGACTCCACCATTGGGGTCCAGGAAATCTAGG +
Preference number: 6 (lower is better)
Translates to: NASKLWSFSGRP*RTPPLGSRKSR
Trigger: CCTAGATTTCCTGGACCCCAATGGTGGAGTCCTCCATGGTCTGCCAGAGAAACTCCAGAGTTTGCTAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 72 bp ACCTTCTTAATTTTCTTGATGTCGCTGTCTTCATCGTaGGGGGCGACAGTCTGGGTGGACTGGATGCGCTCA +
Preference number: 6 (lower is better)
Translates to: TFLIFLMSLSSS*GATVWVDWMRS
Trigger: TGAGCGCATCCAGTCCACCCAGACTGTCGCCCCCAACGATGAAGACAGCGACATCAAGAAAATTAAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 72 bp TGCATGACTTCTTCCAGGAAGCCGATCACCTTGCATTaGAGCTCATCGTTGGTCTCAAAGTCCTGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: CMTSSRKPITLH*SSSLVSKSCRE
Trigger: TTCCCGGCAGGACTTTGAGACCAACGATGAGCTCAAATGCAAGGTGATCGGCTTCCTGGAAGAAGTCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560943.5
CDS TCA 72 bp ATCCTTGTCCGAAGAACTCCTCATAAGGAATCTTCTTaGAGACGAGGTGATCTAGCAGGGTCAGCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: ILVRRTPHKESS*RRGDLAGSAAP
Trigger: CGGAGCAGCTGACCCTGCTAGATCACCTCGTCTTCAAGAAGATTCCTTATGAGGAGTTCTTCGGACAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS GCA 72 bp CGTCCCCTGCCTAGTGAAACAGACGCTCAGTATTCATaGAACACCGCTCTTTGTGAAAACCTTAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: RPLPSETDAQYS*NTALCENLRAS
Trigger: TGAGGCTCTAAGGTTTTCACAAAGAGCGGTGTTGCATGAATACTGAGCGTCTGTTTCACTAGGCAGGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CCA 72 bp ACCATCCTCATGACAGGGTTCCACCTCAGGCCAGGCTaGAAACAGGTTATACATCCAGAACATTGCAAACCA +
Preference number: 6 (lower is better)
Translates to: TILMTGFHLRPG*KQVIHPEHCKP
Trigger: TGGTTTGCAATGTTCTGGATGTATAACCTGTTTCCAGCCTGGCCTGAGGTGGAACCCTGTCATGAGGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS CAA 90 bp CAGGCTGGAAACAGGTTATACATCCAGAACATTGCAAACCATAGCTaGTCTCATCGAGGCTGTCTGCTCCACGTTGCACACAGGATAGGA +
Preference number: 6 (lower is better)
Translates to: QAGNRLYIQNIANHS*SHRGCLLHVAHRIG
Trigger: TCCTATCCTGTGTGCAACGTGGAGCAGACAGCCTCGATGAGACAAGCTATGGTTTGCAATGTTCTGGATGTATAACCTGTTTCCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS TCA 72 bp CCTCAGGGGTCCTCAGCTCCCTCATTGATAAAATGGTaGGATAGGTTAGAGACTTCCTTTGCAGCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: PQGSSAPSLIKW*DRLETSFAALF
Trigger: GAACAGAGCTGCAAAGGAAGTCTCTAACCTATCTCACCATTTTATCAATGAGGGAGCTGAGGACCCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS CAA 90 bp GCCAAGCACACGCCCAATCTTGGGGTCAGATTTCTGCTGAGAAATTaGTCTACTGAGAAGGACAATCTAAGTCTCCATTCTGACAGGAAG +
Preference number: 6 (lower is better)
Translates to: AKHTPNLGVRFLLRN*STEKDNLSLHSDRK
Trigger: CTTCCTGTCAGAATGGAGACTTAGATTGTCCTTCTCAGTAGACAAATTTCTCAGCAGAAATCTGACCCCAAGATTGGGCGTGTGCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS TCA 72 bp CACTGCGGTTATTGTCCAGTTCACGACAGGAGGTCATaGCGACTCCATTGTTATAGGAAAAGAGTGGGAACT +
Preference number: 6 (lower is better)
Translates to: HCGYCPVHDRRS*RLHCYRKRVGT
Trigger: AGTTCCCACTCTTTTCCTATAACAATGGAGTCGTCATGACCTCCTGTCGTGAACTGGACAATAACCGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS GCA 72 bp AACGACTCTTGCAATCAATCTAGCTGTTTTGCAAAGTaGCTGCTGCCACATCAGCTAGGCACAGATTCCTTG +
Preference number: 6 (lower is better)
Translates to: NDSCNQSSCFAK*LLPHQLGTDSL
Trigger: CAAGGAATCTGTGCCTAGCTGATGTGGCAGCAGGCACTTTGCAAAACAGCTAGATTGATTGCAAGAGTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS CAA 72 bp AACAGGTTATACATCCAGAACATTGCAAACCATAGCTaGTCTCATCGAGGCTGTCTGCTCCACGTTGCACAC +
Preference number: 6 (lower is better)
Translates to: NRLYIQNIANHS*SHRGCLLHVAH
Trigger: GTGTGCAACGTGGAGCAGACAGCCTCGATGAGACAAGCTATGGTTTGCAATGTTCTGGATGTATAACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394745.3
CDS GCA 72 bp AATTACCAGAGTGTCCATGGGACCAACAACGACTCTTaGAATCAATCTAGCTGTTTTGCAAAGTGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: NYQSVHGTNNDS*NQSSCFAKCLL
Trigger: CAGCAGGCACTTTGCAAAACAGCTAGATTGATTGCAAGAGTCGTTGTTGGTCCCATGGACACTCTGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560334.5
CDS TCA 72 bp CACCCTGGCGTTGATGTCCTCATTGCGGATGATTTCTaGAGCAATCAAGTTACTGATGTCATTGAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: HPGVDVLIADDF*SNQVTDVIEVL
Trigger: AAGCACTTCAATGACATCAGTAACTTGATTGCTTCAGAAATCATCCGCAATGAGGACATCAACGCCAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
ENST00000560943.5
CDS CAA 72 bp CGTTACCTTTGCTTGGTGCTCTATTTTGTAGGCAGTTaGTTGAAACTGGCGAATCTCTCGGATAATATGGGA +
Preference number: 6 (lower is better)
Translates to: RYLCLVLYFVGS*LKLANLSDNMG
Trigger: TCCCATATTATCCGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAAATAGAGCACCAAGCAAAGGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp ACGCCCAATCTTGGGGTCAGATTTCTGCTGAGAAATTaGTCTACTGAGAAGGACAATCTAAGTCTCCATTCT +
Preference number: 6 (lower is better)
Translates to: TPNLGVRFLLRN*STEKDNLSLHS
Trigger: AGAATGGAGACTTAGATTGTCCTTCTCAGTAGACAAATTTCTCAGCAGAAATCTGACCCCAAGATTGGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623620.1
CDS TCA 72 bp GGTGATGTTTCAGTATCACCATCATCACTCTGGTTTTaGTCAATATCTGACTCCTCTCTCATGGAGACTTCT +
Preference number: 6 (lower is better)
Translates to: GDVSVSPSSLWF*SISDSSLMETS
Trigger: AGAAGTCTCCATGAGAGAGGAGTCAGATATTGATCAAAACCAGAGTGATGATGGTGATACTGAAACATCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
ENST00000560334.5
CDS CAA 90 bp ATATTGCGTTACCTTTGCTTGGTGCTCTATTTTGTAGGCAGTTTGTaGAAACTGGCGAATCTCTCGGATAATATGGGATATCATCCTCAT +
Preference number: 6 (lower is better)
Translates to: ILRYLCLVLYFVGSL*KLANLSDNMGYHPH
Trigger: ATGAGGATGATATCCCATATTATCCGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAAATAGAGCACCAAGCAAAGGTAACGCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7
CDS CAA 72 bp TACCTTTGCTTGGTGCTCTATTTTGTAGGCAGTTTGTaGAAACTGGCGAATCTCTCGGATAATATGGGATAT +
Preference number: 6 (lower is better)
Translates to: YLCLVLYFVGSL*KLANLSDNMGY
Trigger: ATATCCCATATTATCCGAGAGATTCGCCAGTTTCAACAAACTGCCTACAAAATAGAGCACCAAGCAAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394745.3
ENST00000419573.7
ENST00000558480.7