RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGEF1C (Homo sapiens)

Ensembl gene IDs: ENSG00000146090

Ensembl transcript IDs: ENST00000361132.9, ENST00000393371.6, ENST00000519883.1, ENST00000520209.5, ENST00000522500.5, ENST00000615330.4

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAG +
Preference number: 1 (lower is better)
Translates to: GAAETSSSAGQGEGP*VEWQWLPVGSGLAQ
Trigger: CTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp AGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCC +
Preference number: 1 (lower is better)
Translates to: RDHGWNGSGCQWARG*RRHLTSHRDACCGS
Trigger: GGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 90 bp CTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACA +
Preference number: 1 (lower is better)
Translates to: LPVGSGLAQASHVAP*CLLWLQKFPSHVVT
Trigger: TGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGC +
Preference number: 1 (lower is better)
Translates to: VPKACAARTSGGPGS*QGQSPIKGLLCPYG
Trigger: GCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 90 bp TGTGTCCTTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGA +
Preference number: 1 (lower is better)
Translates to: CVLAEDGQTDQAPRS*RQDVPKACAARTSG
Trigger: TCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAAGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR GCA 90 bp GGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTaGAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGG +
Preference number: 1 (lower is better)
Translates to: GGGQSGTCHQARSRA*SGPTLWGSVVSLPR
Trigger: CCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp TGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTaGGGCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGA +
Preference number: 1 (lower is better)
Translates to: CPVDAFHSCHRKAIS*GQQHPGRGYLGLQR
Trigger: TCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 90 bp CACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCA +
Preference number: 1 (lower is better)
Translates to: HRDACCGSRSSQATW*QTVGGGQSGTCHQA
Trigger: TGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp ACATGTCACCAAGCAAGGTCTCGAGCTTGCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGG +
Preference number: 1 (lower is better)
Translates to: TCHQARSRACSGPTL*GSVVSLPRMDRLTR
Trigger: CCTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGACCTTGCTTGGTGACATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp TGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGA +
Preference number: 1 (lower is better)
Translates to: WPKWHMSPSKVSSLQ*SHPLGQCCVLAEDG
Trigger: TCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp CCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAG +
Preference number: 1 (lower is better)
Translates to: PAVAPEVPKPRGDRL*VVAKVAHVTKQGLE
Trigger: CTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp AAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTaGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAGTGGTCCCAC +
Preference number: 1 (lower is better)
Translates to: KFPSHVVTDCGWWPK*HMSPSKVSSLQWSH
Trigger: GTGGGACCACTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp TGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAG +
Preference number: 1 (lower is better)
Translates to: WLQKFPSHVVTDCGW*PKWHMSPSKVSSLQ
Trigger: CTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp CTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTG +
Preference number: 1 (lower is better)
Translates to: LWLQKFPSHVVTDCG*WPKWHMSPSKVSSL
Trigger: CAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 90 bp CGTACGGGTGTGTTTATAGTGACTAGAGTTTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACACACTGTAACTCCATGTGTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: RTGVFIVTRVYKGAG*RDCRVHTVTPCVQF
Trigger: AAACTGGACACATGGAGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACTCTAGTCACTATAAACACACCCGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361132.9
ENST00000615330.4
3UTR GCA 90 bp GTGTTTATAGTGACTAGAGTTTACAAGGGGGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACTCCATGTGTCCAGTTTGTCCTGTTG +
Preference number: 1 (lower is better)
Translates to: VFIVTRVYKGAGWRD*RVHTVTPCVQFVLL
Trigger: CAACAGGACAAACTGGACACATGGAGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACTCTAGTCACTATAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: GSGCQWARGWRRHLTSHRCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...ACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: ASGLGAGAGISRRTVMPAHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...AGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 2 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 2 (lower is better)
Translates to: EWQWLPVGSGLAQASHVARGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 2 (lower is better)
Translates to: GGMAVAASGLGAGAGISRRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 2 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 2 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: EWQWLPVGSGLAQASHVAVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ASGLGAGAGISRRTVMPAQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...AGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 2 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: AASRKGVPGAAETSSSAGVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 2 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CAA 90 bp TCTCGAGCTTGCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: SRACSGPTLWGSVVS*PRMDRLTRPHGPEG
Trigger: GCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 2 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGACPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 2 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 2 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 2 (lower is better)
Translates to: AASRKGVPGAAETSSSAGAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 2 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 2 (lower is better)
Translates to: WARGWRRHLTSHRDACCGTDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGCGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRRGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LTRSTAVTGKLSPGASSICPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCATCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRASHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 2 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRASGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 2 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGCGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRRGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 2 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: LTRSTAVTGKLSPGASSISQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGACPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 2 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: LSPESYLLGPAASRKGVPSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 2 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCCGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: RHLTSHRDACCGSRSSQARGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 2 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: LTRSTAVTGKLSPGASSISGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 2 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGSGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 2 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQTDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CAA 90 bp GACTGCCGTGTACACACTGTAACTCCATGTGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: DCRVHTVTPCVQFVL*TRSTAVTGKLSPGA
Trigger: GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACATGGAGTTACAGTGTGTACACGGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 2 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR TCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LTRSTAVTGKLSPGASSIGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 2 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR GCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 2 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 2 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAIVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CCA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 2 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAITDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR GCA 72 bp CCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: PTVLKAGCPQGM*RPHVWRPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR GCA 72 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACG +
Preference number: 3 (lower is better)
Translates to: GRVRDHGWNGSG*QWARGWRRHLT
Trigger: CGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp GGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCGCACCGTGATGCCTGC +
Preference number: 3 (lower is better)
Translates to: GWNGSGCQWARG*RRHLTSHRDAC
Trigger: GCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 72 bp GCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGC +
Preference number: 3 (lower is better)
Translates to: AEDGQTDQAPRS*RQDVPKACAAR
Trigger: GCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp GCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCAGGGCCAAAGTCCCAT +
Preference number: 3 (lower is better)
Translates to: AGCPQGMCRPHV*RPWVLPGPKSH
Trigger: ATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp GTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAC +
Preference number: 3 (lower is better)
Translates to: VRDHGWNGSGCQ*ARGWRRHLTSH
Trigger: GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp TCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SPGASSIQEGGT*GCRDKLVGRAG
Trigger: CCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 3 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 3 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 3 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 72 bp GGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCAC +
Preference number: 3 (lower is better)
Translates to: GSGLAQASHVAP*CLLWLQKFPSH
Trigger: GTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR GCA 72 bp GCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: ACAARTSGGPGS*QGQSPIKGLLC
Trigger: GCACAGGAGACCTTTTATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCACCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 3 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRAPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 72 bp GGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTGAAGGCAGGATGTCCC +
Preference number: 3 (lower is better)
Translates to: GAVLCPCRGWTD*PGPTVLKAGCP
Trigger: GGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 3 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 3 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 3 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 3 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRANSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 3 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 3 (lower is better)
Translates to: AASRKGVPGAAETSSSAGPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 3 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 3 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR TCA 72 bp GCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGCCAAAGTGGCACATGT +
Preference number: 3 (lower is better)
Translates to: ACCGSRSSQATW*QTVGGGQSGTC
Trigger: ACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp CAAGCAAGGTCTCGAGCTTGCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGA +
Preference number: 3 (lower is better)
Translates to: QARSRACSGPTL*GSVVSLPRMDR
Trigger: TCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGACCTTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp TGGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCC +
Preference number: 3 (lower is better)
Translates to: WHMSPSKVSSLQ*SHPLGQCCVLA
Trigger: GGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 3 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 3 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGNSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR CCA 72 bp AGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTaGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: SHVVTDCGWWPK*HMSPSKVSSLQ
Trigger: CTGCAAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp AAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCG +
Preference number: 3 (lower is better)
Translates to: KFPSHVVTDCGW*PKWHMSPSKVS
Trigger: CGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR-3UTR CAA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
3UTR GCA 72 bp GTGACTAGAGTTTACAAGGGGGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACTCCATGTGTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: VTRVYKGAGWRD*RVHTVTPCVQF
Trigger: AAACTGGACACATGGAGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACTCTAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
3UTR CCA 72 bp GTGTTTATAGTGACTAGAGTTTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACACACTGTAACTCCATGT +
Preference number: 3 (lower is better)
Translates to: VFIVTRVYKGAG*RDCRVHTVTPC
Trigger: ACATGGAGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACTCTAGTCACTATAAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCCGTCTGTGGCATGTCTaGCGGCTCCCGGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGRLWHV*RLPARR
Trigger: CCGGCGCGCCGGGAGCCGGCAGACATGCCACAGACG...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361132.9
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCTGGGCTGAGGCTGCCTaGGGTGACCATGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGWAEAA*GDHVGG
Trigger: GCCTCCGACATGGTCACCCCAGGCAGCCTCAGCCCA...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTACCCACCAGACCTTCTaGCCCCTGGCGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGCQWARGWRRHLTSHRTHQTF*PLAQSR
Trigger: GCGGCTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGT...ACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASGLGAGAGISRRTVMPACRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...AGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACGCCGGGTGGGCACGTaGGCCTCACTGCGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVARRVGT*ASLRVL
Trigger: AAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR GCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTCGTCTGTGGCATGTCTaGCGGCTCCCGGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGRLWHV*RLPARR
Trigger: CCGGCGCGCCGGGAGCCGGCAGACATGCCACAGACG...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361132.9
ENST00000615330.4
CDS-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCATGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVACRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCCGCGGGCCACGTCGATaGAGAACTCAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGRGPRR*RTQSPG
Trigger: CCCAGGTGATTGAGTTCTTCATCGACGTGGCCCGCG...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCGGTGCGATCCTGCTCTaGGCCCACGGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPGAILL*AHGERR
Trigger: CCTCCTCTCCCCGTGGGCGCAGAGCAGGATCGCACC...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR GCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGCAGGCAGGGCCTCGTaGCCTCTCTGTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVAGRAS*PLCARE
Trigger: CTCCCTGGCACAGAGAGGGCACGAGGCCCTGCCTGC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR GCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCGCACGTGAGCCTCACTaGGCGTCCTTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCAREPH*ASLRVW
Trigger: CCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGC...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR CCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGTAAAV*GRTSGP
Trigger: GGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGT...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCAGACCTTCTGGCCCCTaGCGCAGAGCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCRPSGP*RRAASF
Trigger: GAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCT...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAACCCACCAGACCTTCTaGCCCCTGGCGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPTHQTF*PLAQSR
Trigger: GCGGCTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGT...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRAGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCCTCGGCCTCCCAAGGTaGCCTCCTTCTCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVLGLPR*PPSLGC
Trigger: GCAGCCGAGAGAAGGAGGCCACCTTGGGAGGCCGAG...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGGCTCCCGGGGCTCGATaGAGAGGCGAGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSAPGAR*RGESSA
Trigger: TGCTGAGCTCTCGCCTCTTCATCGAGCCCCGGGAGC...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCGCTCCCGGGGCTCGATaGAGAGGCGAGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSAPGAR*RGESSA
Trigger: TGCTGAGCTCTCGCCTCTTCATCGAGCCCCGGGAGC...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVAQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCGCTGTGGGCACCAGGTaGTGGATCAGTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGAVGTR*WISVSR
Trigger: CCTGGAAACACTGATCCAGCACCTGGTGCCCACAGC...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCGGCACTCAGCGTCTGTaGCATGTCTGCCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLGTQRL*HVCRLP
Trigger: CGGGAGCCGGCAGACATGCCACAGACGCTGAGTGCC...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361132.9
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGTGCTCGATGCACAGGTaGCAGACCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSCSMHR*QTRARS
Trigger: GCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCA...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGAGACCTTCTGGCCCCTaGCGCAGAGCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSRPSGP*RRAASF
Trigger: GAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAAGACCTTCTGGCCCCTaGCGCAGAGCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPRPSGP*RRAASF
Trigger: GAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCT...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTACCCACCAGACCTTCTaGCCCCTGGCGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPTHQTF*PLAQSR
Trigger: GCGGCTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGT...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLFSRLL*AVRERW
Trigger: CCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAA...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGTGCCGCCCGCACGTCTaGAGGCCCTGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRCRPHV*RPWVLP
Trigger: TGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCA...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCATGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVAWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTCTGAGTGGGAGCTGCTaGTCCCGGGGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSALSGSC*SRGSWL
Trigger: CAGCCAGGAGCCCCGGGACCAGCAGCTCCCACTCAG...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTTGGGTGCACCTGAGTaGGAGCTGCTGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHLGAPE*ELLVPG
Trigger: CCCCGGGACCAGCAGCTCCCACTCAGGTGCACCCAA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR TCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCGAGGATGGACAGACTaGCCAGGCCCCACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGRGWTD*PGPTVL
Trigger: CAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCG...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGCCTTTCTGCGGTTaGCGGCTCCATCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPWPFCG*RLHPPW
Trigger: CCAGGGAGGATGGAGCCGTCAACCGCAGAAAGGCCA...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR GCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCCCATCCAGGAGGGGCTaGCCAGCCTGTTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSPSRRG*PACSPS
Trigger: AGATGGCGAACAGGCTGGGCAGCCCCTCCTGGATGG...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCCTTGTCTACTCCTCTTaGCCCACTCAGGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGLVYSS*PTQGQA
Trigger: GGCCTGCCCCTGAGTGGGGCAAGAGGAGTAGACAAG...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGGCACTCAGCGTCTGTaGCATGTCTGCCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGGTQRL*HVCRLP
Trigger: CGGGAGCCGGCAGACATGCCACAGACGCTGAGTGCC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361132.9
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCTGCTCGATGCACAGGTaGCAGACCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSCSMHR*QTRARS
Trigger: GCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCA...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGTAAAV*GRTSGP
Trigger: GGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGT...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GSGCQWARGWRRHLTSHRPVDGG*WLGPVG
Trigger: TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGG...ACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCCCAAGGAGCTCCCTGTaGATGGAGGCTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGPRSSL*MEAGGL
Trigger: CAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGG...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCACAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRAQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTGTTTCCAGGGAGGCTaGGGATGGCGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHCFQGG*GWRSIQ
Trigger: CTGGATGGAGCGCCATCCTCAGCCTCCCTGGAAACA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGTGTTTCCAGGGAGGCTaGGGATGGCGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWCFQGG*GWRSIQ
Trigger: CTGGATGGAGCGCCATCCTCAGCCTCCCTGGAAACA...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCTGTTTCCAGGGAGGCTaGGGATGGCGCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLCFQGG*GWRSIQ
Trigger: CTGGATGGAGCGCCATCCTCAGCCTCCCTGGAAACA...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCAGAGCCTGTAGGAGCTaGTGCATCCTCTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGRACRS*CILFRY
Trigger: ATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCT...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCCGCGGGCCACGTCGATaGAGAACTCAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSRGPRR*RTQSPG
Trigger: CCCAGGTGATTGAGTTCTTCATCGACGTGGCCCGCG...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGGCTTGTCCAGCTGCTaGTGCTCGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVGLSSC*CSMHRW
Trigger: CCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLHSANS*SSLGPN
Trigger: GTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTG...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRHSANS*SSLGPN
Trigger: GTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTG...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGTGTGTAGGGGTCGCTaGAGACACCAAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVVCRGR*RHQGAP
Trigger: GGGAGCTCCTTGGTGTCTGCAGCGACCCCTACACAC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCCAATCTTCTCTCGGCTaGTGTGGGCCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPQSSLG*CGPSGS
Trigger: GCTCCCTGACGGCCCACAGCAGCCGAGAGAAGATTG...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
CDS-3UTR GCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCTCACTGCGCGTCCTTaGGGGTCTGGCCGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSILTARP*GSGRPG
Trigger: CCCCGGGCGGCCAGACCCGCAAGGACGCGCAGTGAG...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR CCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCGGTAGTAGTCGGCTGTaGGCACCAGGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCGSSRL*APGAGS
Trigger: TGATCCAGCACCTGGTGCCCACAGCCGACTACTACC...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVPVDGG*WLGPVG
Trigger: TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGG...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGCCAAGGAGCTCCCTGTaGATGGAGGCTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PEGRMSPRHVPPARLEALPRSSL*MEAGGL
Trigger: CAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGG...CAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCAAGGAGCTCCCTGTaGATGGAGGCTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVAPRSSL*MEAGGL
Trigger: CAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGGGGCACACCTGAGTTaGGTGCACCTGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRGAHLS*VHLSGS
Trigger: GCTCCCACTCAGGTGCACCCAACTCAGGTGTGCCCC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR TCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCCGCGGGCCACGTCGATaGAGAACTCAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGRGPRR*RTQSPG
Trigger: CCCAGGTGATTGAGTTCTTCATCGACGTGGCCCGCG...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSICPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGITWAL*FFLAGM
Trigger: CATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGAT...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGGGCTGTCCTGTAGTTaGAGAAATTCCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GSGCQWARGWRRHLTSHRGLSCS*RNSPLG
Trigger: ACCCAACGGGGAATTTCTGCAACTACAGGACAGCCC...ACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRAGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGGTGGGCACCAGGTGCTaGATCAGTGTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSVGTRC*ISVSRE
Trigger: CTCCCTGGAAACACTGATCCAGCACCTGGTGCCCAC...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTGGTAGTAGTCGGCTGTaGGCACCAGGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRGSSRL*APGAGS
Trigger: TGATCCAGCACCTGGTGCCCACAGCCGACTACTACC...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGAGACCTTCTGGCCCCTaGCGCAGAGCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRRPSGP*RRAASF
Trigger: GAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCT...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPWSCRR*ACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCA...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGVDGGW*LGPVGD
Trigger: ATCTCCTACAGGACCAAGCCACCAGCCTCCATCCAC...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHPVDGG*WLGPVG
Trigger: TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGG...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCAGCAGGGCTTTGTGCTaGCCAGAGGGTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCSRALC*PEGPCS
Trigger: TGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCT...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCAGCAGGGCTTTGTGCTaGCCAGAGGGTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGSRALC*PEGPCS
Trigger: TGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCT...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGCAGAAATTCCCCGTTaGGTCCATCTGGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGAEIPR*VHLVLE
Trigger: CTCGAGCACCAGATGGACCCAACGGGGAATTTCTGC...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDFSRLL*AVRERW
Trigger: CCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAA...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCCACGTCTGGAGGCCCTaGGTCCTGCCAGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAHVWRP*VLPGPK
Trigger: CTTTGGCCCTGGCAGGACCCAGGGCCTCCAGACGTG...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRSGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: ASGLGAGAGISRRTVMPAVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...AGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVARGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTGGCAGTGGCTGCCAGTaGGCTCGGGGCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGGSGCQ*ARGWRR
Trigger: CCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCC...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPGRGYLGLQRQARRQGRVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...CCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGGCACTCAGCGTCTGTaGCATGTCTGCCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVGTQRL*HVCLQW
Trigger: CCATTGCAGGCAGACATGCCACAGACGCTGAGTGCC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCGGACGGACACATTTCTaGGCAGGGCCATCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGGRTHF*AGPSLA
Trigger: AGCAAGAGATGGCCCTGCCCAGAAATGTGTCCGTCC...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGAGGGGCGCCGGGTaGGCACGTGAGCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVVRGAG*AREPHC
Trigger: GCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCAC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR TCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCCAGGCCCCACGGTCCTaGAGGCAGGATGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSQAPRS*RQDVPK
Trigger: CTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTG...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLITWAL*FFLAGM
Trigger: CATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGAT...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTTGGAATGGCAGTGGCTaGCAGTGGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGWNGSG*QWARGW
Trigger: CCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGGGGGGTACCTGGGGCTaGAGAGACAAGCTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQGGTWG*RDKLVG
Trigger: GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCC...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCCCTCCTTCTCTCGGCTaGTGTGGGCCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAPPSLG*CGPSGS
Trigger: GCTCCCTGACGGCCCACAGCAGCCGAGAGAAGGAGG...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCTGCTCGATGCACAGGTaGCAGACCCGGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQACSMHR*QTRARS
Trigger: GCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCA...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRTAAAV*GRTSGP
Trigger: GGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGT...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGWSCRR*ACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCA...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPVDGGW*LGPVGD
Trigger: ATCTCCTACAGGACCAAGCCACCAGCCTCCATCCAC...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGLFTKA*TNSSGP
Trigger: CGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAA...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGLFTKA*TNSSGP
Trigger: CGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAA...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCCCCTCTGCTTCTTCTTaGCTGGCATGCAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVPSASS*LACRSQ
Trigger: CTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGG...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCCCGTTGGGTCCATCTaGTGCTCGAGGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCPVGSI*CSRMKN
Trigger: GTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCGCAGAAATTCCCCGTTaGGTCCATCTGGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPAEIPR*VHLVLE
Trigger: CTCGAGCACCAGATGGACCCAACGGGGAATTTCTGC...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVATPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCAACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GVPGAAETSSSAGQGEGPTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...TGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSPESYLLGPAASRKGVPTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGACTGAGGCAGGGCTGTaGACGGCTTCTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGTEAGL*TASAGS
Trigger: GGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGT...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: GQGEGPWVEWQWLPVGSGTDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCGTGACAGACTGTGGGTaGTGGCCAAAGTGGCACATG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLVTDCG*WPKWHM
Trigger: CATGTGCCACTTTGGCCACCACCCACAGTCTGTCAC...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTCGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSARGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAAGCTCAGCAGGAAGGTaGAGATGTAGGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVASSAGR*RCRLSR
Trigger: CCGAGAAAGCCTACATCTTCACCTTCCTGCTGAGCT...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCGCTCCCGGGGCTCGATaGAGAGGCGAGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSIAPGAR*RGESSA
Trigger: TGCTGAGCTCTCGCCTCTTCATCGAGCCCCGGGAGC...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGAGAGCCTGTAGGAGCTaGTGCATCCTCTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSRACRS*CILFRY
Trigger: ATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGTGCCCACTGGGCCACTaGGGCAGGGCTGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWCPLGH*GRAVDG
Trigger: GCCGTCCACAGCCCTGCCTCAGTGGCCCAGTGGGCA...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCTCCCAAGCCACGTGGTaGCAGACTGTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSSQATW*QTVGGG
Trigger: GCCACCACCCACAGTCTGTCACCACGTGGCTTGGGA...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGTCTCACGTCGCACCGTaGTGCCTGCTGTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQSHVAP*CLLWLQ
Trigger: CTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGA...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCCCATCCAGGAGGGGCTaGCCAGCCTGTTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAPSRRG*PACSPS
Trigger: AGATGGCGAACAGGCTGGGCAGCCCCTCCTGGATGG...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRHSANS*SSLGPN
Trigger: GTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTG...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCGTGTGTAGGGGTCGCTaGAGACACCAAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAVCRGR*RHQGAP
Trigger: GGGAGCTCCTTGGTGTCTGCAGCGACCCCTACACAC...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCGTGTGTAGGGGTCGCTaGAGACACCAAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSVCRGR*RHQGAP
Trigger: GGGAGCTCCTTGGTGTCTGCAGCGACCCCTACACAC...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGITWAL*FFLAGM
Trigger: CATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGAT...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCAATCTTCTCTCGGCTaGTGTGGGCCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSQSSLG*CGPSGS
Trigger: GCTCCCTGACGGCCCACAGCAGCCGAGAGAAGATTG...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
CDS-3UTR GCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 4 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: WARGWRRHLTSHRDACCGHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...GCCACAGCAGGCATCACGGTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTCCCACAGCCACTTTGTaGCAGCTTGAGTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAPTATL*QLESSG
Trigger: ACCACTGGACTCAAGCTGGCACAAAGTGGCTGTGGG...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR GCA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCTGTGGCATGTCTaGCTGCAATGGCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPRLWHV*LQWQGA
Trigger: TGCTCCTTGCCATTGCAGGCAGACATGCCACAGACG...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGVDGGW*LGPVGD
Trigger: ATCTCCTACAGGACCAAGCCACCAGCCTCCATCCAC...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGAGCTCCCTGTaGATGGAGGCTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSPRSSL*MEAGGL
Trigger: CAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGG...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCCCCTCTGCTTCTTCTTaGCTGGCATGCAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: VLKAGCPQGMCRPHVWRPPSASS*LACRSQ
Trigger: CTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGG...GGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCAGGTCTTCTTCAGCCTaGAGACAGGGCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVRSSSA*RQGSCS
Trigger: TGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCT...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSTDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVATDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCACGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRARGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCCAGTGGGCTCGGGGCTaGCGCAGGCATCTCACGTCG +
Preference number: 4 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAQWARG*RRHLTS
Trigger: CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTG...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGTACAAGGGGGCTGGGTaGCGGGACTGCCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGYKGAG*RDCRVH
Trigger: GTGTACACGGCAGTCCCGCCACCCAGCCCCCTTGTA...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCGGTAGCACAGCCTGTTaGACCATTTCACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: QDVPKACAARTSGGPGSCGSTAC*TISHKP
Trigger: AGGCTTATGTGAAATGGTTCAACAGGCTGTGCTACC...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGCGCGGGCCACGTCGATaGAGAACTCAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQRGPRR*RTQSPG
Trigger: CCCAGGTGATTGAGTTCTTCATCGACGTGGCCCGCG...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTTCTGGTGCTCGAGGATaGAAAACTTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGSGARG*KTWPSS
Trigger: TGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGA...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCTCTGGTGCTCGAGGATaGAAAACTTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSSGARG*KTWPSS
Trigger: TGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGA...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGAATGGCAAGGAGCAGTaGGGACCTGAGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQNGKEQ*GPEWGH
Trigger: GTGCCCCCACTCAGGTCCTCACTGCTCCTTGCCATT...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR GCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGGCTTGTCCAGCTGCTaGTGCTCGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQGLSSC*CSMHRW
Trigger: CCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGGCTTGTCCAGCTGCTaGTGCTCGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGGLSSC*CSMHRW
Trigger: CCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCC...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGHSANS*SSLGPN
Trigger: GTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTG...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTGGGCTGTCCTGTAGTTaGAGAAATTCCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPGLSCS*RNSPLG
Trigger: ACCCAACGGGGAATTTCTGCAACTACAGGACAGCCC...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGGGCTGTCCTGTAGTTaGAGAAATTCCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGGLSCS*RNSPLG
Trigger: ACCCAACGGGGAATTTCTGCAACTACAGGACAGCCC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGTGTCCCCAAGGCATGTaGCGCCCGCACGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKCPQGM*RPHVWR
Trigger: CCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACA...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTCGCACCGTGATGCCTaGTGTGGCTCCAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRSHRDA*CGSRSS
Trigger: GGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGCCTCTCAACTCTCCTaGAGGACCCATCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: AASRKGVPGAAETSSSAGASQLS*RTHLLS
Trigger: AGACAAGAGATGGGTCCTGCAGGAGAGTTGAGAGGC...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCTGGGCTGAGGCTGCCTaGGGTGACCATGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAWAEAA*GDHVGG
Trigger: GCCTCCGACATGGTCACCCCAGGCAGCCTCAGCCCA...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACGGTAGTAGTCGGCTGTaGGCACCAGGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDGSSRL*APGAGS
Trigger: TGATCCAGCACCTGGTGCCCACAGCCGACTACTACC...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGATAGTCGACTCTTCCTaGAAGTCCCTTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSIVDSS*KSLGKV
Trigger: GACCTTCCCAAGGGACTTCCAGGAAGAGTCGACTAT...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTAGACCTTCTGGCCCCTaGCGCAGAGCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRARPSGP*RRAASF
Trigger: GAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCT...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGACCCACCAGACCTTCTaGCCCCTGGCGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWTHQTF*PLAQSR
Trigger: GCGGCTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGT...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTCCAAGGAGCTCCCTGTaGATGGAGGCTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSPESYLLGPAASRKGVPPRSSL*MEAGGL
Trigger: CAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGG...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPLFTKA*TNSSGP
Trigger: CGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAA...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAAGCAGGGCTTTGTGCTaGCCAGAGGGTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRASRALC*PEGPCS
Trigger: TGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCT...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACCTGCTTCTTCTTGGCTaGCATGCAGATCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHLLLLG*HADLSC
Trigger: GCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAG...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCTGCTTCTTCTTGGCTaGCATGCAGATCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: WNGSGCQWARGWRRHLTSLLLLG*HADLSC
Trigger: GCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAG...CGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCAAGGTCTTCTTCAGCCTaGAGACAGGGCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: EWQWLPVGSGLAQASHVARSSSA*RQGSCS
Trigger: TGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCT...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGAGGGACCATGGGTGGAGGTCTTCTTCAGCCTaGAGACAGGGCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LGLQRQARRQGRVRDHGWRSSSA*RQGSCS
Trigger: TGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCT...CCACCCATGGTCCCTCACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGAGGTCTTCTTCAGCCTaGAGACAGGGCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLRSSSA*RQGSCS
Trigger: TGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCT...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTCCCGTTGGGTCCATCTaGTGCTCGAGGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAPVGSI*CSRMKN
Trigger: GTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCCCCGTTGGGTCCATCTaGTGCTCGAGGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGPVGSI*CSRMKN
Trigger: GTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGFSRLL*AVRERW
Trigger: CCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAA...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: VPKACAARTSGGPGSCQGFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGCTGGCCTCTGCCCACTaGGCCACTGAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGLASAH*ATEAGL
Trigger: CAGCCCTGCCTCAGTGGCCCAGTGGGCAGAGGCCAG...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVASGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTGGGTGGAATGGCAGTaGCTGCCAGTGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAWVEWQ*LPVGSG
Trigger: CCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCA...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSPESYLLGPAASRKGVPQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGAGAGCCTGTAGGAGCTaGTGCATCCTCTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQRACRS*CILFRY
Trigger: ATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCT...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCGGTAGCACAGCCTGTTaGACCATTTCACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: HWATEAGLWTASAGSSSSGSTAC*TISHKP
Trigger: AGGCTTATGTGAAATGGTTCAACAGGCTGTGCTACC...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCATCTGGTGCTCGAGGATaGAAAACTTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRASGARG*KTWPSS
Trigger: TGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGA...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCCATCCAGGAGGGGCTaGCCAGCCTGTTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGPSRRG*PACSPS
Trigger: AGATGGCGAACAGGCTGGGCAGCCCCTCCTGGATGG...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQTTSLR*PIVDSS
Trigger: GGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGT...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGTTGGGTCCATCTGGTaGTCGAGGATGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: PEGRMSPRHVPPARLEALVGSIW*SRMKNL
Trigger: CAAGTTTTTCATCCTCGAGCACCAGATGGACCCAAC...CAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTTTCATGTCTTCCCCAAAAGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: GLQLFLVPQLSAFMSSPKGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...TTTTGGGGAAGACATGAAAGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCGGAGGCCCTGGGTCCTaGCAGGGCCAAAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGGGPGS*QGQSPI
Trigger: TATGGGACTTTGGCCCTGGCAGGACCCAGGGCCTCC...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGGCAGGGCCATCTCTTaGTCTGGCCTTTCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQGRAIS*SGLSAV
Trigger: AACCGCAGAAAGGCCAGAGCAAGAGATGGCCCTGCC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS-3UTR CCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTATAGTCGACTCTTCCTaGAAGTCCCTTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGIVDSS*KSLGKV
Trigger: GACCTTCCCAAGGGACTTCCAGGAAGAGTCGACTAT...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGWSCRR*ACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCA...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRVDGGW*LGPVGD
Trigger: ATCTCCTACAGGACCAAGCCACCAGCCTCCATCCAC...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGPVDGG*WLGPVG
Trigger: TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGG...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQLFTKA*TNSSGP
Trigger: CGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAA...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCATTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRALFTKA*TNSSGP
Trigger: CGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAA...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAAGAACTCAATCACCTaGGCCCTCTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLKNSIT*ALCFFL
Trigger: CAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTT...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTAAGAACTCAATCACCTaGGCCCTCTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGMAVAASGLGAGAGISRKNSIT*ALCFFL
Trigger: CAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTT...ACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCACCCGTTGGGTCCATCTaGTGCTCGAGGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRAPVGSI*CSRMKN
Trigger: GTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLWVVAKVAHVTKQGLELFSRLL*AVRERW
Trigger: CCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAA...AAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQASGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTGTCTCGAGCTTGCAGTaGTCCCACCCTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGVSSLQ*SHPLGQ
Trigger: CTGCCCCAGAGGGTGGGACCACTGCAAGCTCGAGAC...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTCGTGGTGACAGACTGTaGGTGGTGGCCAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGRGDRL*VVAKVA
Trigger: TGCCACTTTGGCCACCACCCACAGTCTGTCACCACG...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGGACCATGGGTGGAATaGCAGTGGCTGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKGPWVE*QWLPVG
Trigger: GCCCACTGGCAGCCACTGCCATTCCACCCATGGTCC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACCATGTCTGCCTGCAATaGCAAGGAGCAGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDHVCLQ*QGAVRT
Trigger: GGTCCTCACTGCTCCTTGCCATTGCAGGCAGACATG...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGCTCGGCCTCCCAAGGTaGCCTCCTTCTCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWLGLPR*PPSLGC
Trigger: GCAGCCGAGAGAAGGAGGCCACCTTGGGAGGCCGAG...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTGGTAGCACAGCCTGTTaGACCATTTCACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: AVDGFCGLQLFLVPQLSAGSTAC*TISHKP
Trigger: AGGCTTATGTGAAATGGTTCAACAGGCTGTGCTACC...AGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGGTAGCACAGCCTGTTaGACCATTTCACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGGSTAC*TISHKP
Trigger: AGGCTTATGTGAAATGGTTCAACAGGCTGTGCTACC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCGCGGGCCACGTCGATaGAGAACTCAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKRGPRR*RTQSPG
Trigger: CCCAGGTGATTGAGTTCTTCATCGACGTGGCCCGCG...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCACTTTGTGCCAGCTTaGGTCCAGTGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRHFVPA*VQWSLP
Trigger: AGGAAGTGACCACTGGACTCAAGCTGGCACAAAGTG...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR GCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCGCTGTGGGCACCAGGTaGTGGATCAGTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSIAVGTR*WISVSR
Trigger: CCTGGAAACACTGATCCAGCACCTGGTGCCCACAGC...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDTTSLR*PIVDSS
Trigger: GGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGT...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGTGTGTAGGGGTCGCTaGAGACACCAAGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKVCRGR*RHQGAP
Trigger: GGGAGCTCCTTGGTGTCTGCAGCGACCCCTACACAC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGITWAL*FFLAGM
Trigger: CATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGAT...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGTTGGGTCCATCTGGTaGTCGAGGATGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGVGSIW*SRMKNL
Trigger: CAAGTTTTTCATCCTCGAGCACCAGATGGACCCAAC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCGTTGGGTCCATCTGGTaGTCGAGGATGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGVGSIW*SRMKNL
Trigger: CAAGTTTTTCATCCTCGAGCACCAGATGGACCCAAC...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAATCTTCTCTCGGCTaGTGTGGGCCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGQSSLG*CGPSGS
Trigger: GCTCCCTGACGGCCCACAGCAGCCGAGAGAAGATTG...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
CDS-3UTR GCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGCCGAGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LPRMDRLTRPHGPEGRMSIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...GGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCTCGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAATCTTGTGATCTaGTCGCCTCGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGDNLVI*SPRPPK
Trigger: CTTGGGAGGCCGAGGCGAGCAGATCACAAGATTGTC...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTGATGAACTCCCCCACCTGCTTGGCCAGCTCCAGGAATTTCTCAAAGTTGACGTGGGCTGAGGCTGCCTaGGGTGACCATGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: VMNSPTCLASSRNFSKLTWAEAA*GDHVGG
Trigger: GCCTCCGACATGGTCACCCCAGGCAGCCTCAGCCCA...CGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGGCACCAGGTGCTaGATCAGTGTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVVGTRC*ISVSRE
Trigger: CTCCCTGGAAACACTGATCCAGCACCTGGTGCCCAC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGATAGTCGACTCTTCCTaGAAGTCCCTTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQIVDSS*KSLGKV
Trigger: GACCTTCCCAAGGGACTTCCAGGAAGAGTCGACTAT...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCAGCAGGGCTTTGTGCTaGCCAGAGGGTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQASRALC*PEGPCS
Trigger: TGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCT...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCCCCTCTGCTTCTTCTTaGCTGGCATGCAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAPSASS*LACRSQ
Trigger: CTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGG...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGAGGTCTTCTTCAGCCTaGAGACAGGGCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQRSSSA*RQGSCS
Trigger: TGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCT...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGCAGAAATTCCCCGTTaGGTCCATCTGGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: TRSTAVTGKLSPGASSIQAEIPR*VHLVLE
Trigger: CTCGAGCACCAGATGGACCCAACGGGGAATTTCTGC...CTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTGATGAACTCCCCCACCTGCTTGGCCAGCTCCAGGAATTTCTCAAAGTTGACGTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VMNSPTCLASSRNFSKLTFSRLL*AVRERW
Trigger: CCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAA...CGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGACTCCCCCACCTGCTTaGCCAGCTCCAGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQTPPPA*PAPGIS
Trigger: AGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGT...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVSGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGTGAGGGACCATGGGTaGAATGGCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAVRDHG*NGSGCQ
Trigger: CTGGCAGCCACTGCCATTCCACCCATGGTCCCTCAC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCCAGGAAGGGGGTACCTaGGGCTGCAGAGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAQEGGT*GCRDKL
Trigger: GAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTG...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTAGTTTACAAGGGGGCTaGGTGGCGGGACTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGSLQGG*VAGLPC
Trigger: ACACGGCAGTCCCGCCACCCAGCCCCCTTGTAAACT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTAGCTCAGCAGGAAGGTaGAGATGTAGGCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGSSAGR*RCRLSR
Trigger: CCGAGAAAGCCTACATCTTCACCTTCCTGCTGAGCT...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR TCA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCTCTGGTGCTCGAGGATaGAAAACTTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSSGARG*KTWPSS
Trigger: TGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGA...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGAAAGACCATCCTCACTaGAGATGGGGGCGGTGTACA +
Preference number: 4 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGKDHPH*RWGRCT
Trigger: TGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTT...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGCTGTGGGCACCAGGTaGTGGATCAGTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAAVGTR*WISVSR
Trigger: CCTGGAAACACTGATCCAGCACCTGGTGCCCACAGC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR GCA 90 bp AGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RLWVVAKVAHVTKQGLELHSANS*SSLGPN
Trigger: GTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTG...AAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTGGGCTGTCCTGTAGTTaGAGAAATTCCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPESYLLGPAASRKGVPGLSCS*RNSPLG
Trigger: ACCCAACGGGGAATTTCTGCAACTACAGGACAGCCC...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGCTGGGTGGCGGGACTaGCGTGTACACACTGTAACT +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAAGWRD*RVHTVT
Trigger: AGTTACAGTGTGTACACGGCAGTCCCGCCACCCAGC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGTGGGCACCAGGTGCTaGATCAGTGTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAVGTRC*ISVSRE
Trigger: CTCCCTGGAAACACTGATCCAGCACCTGGTGCCCAC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CCA 90 bp AGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: RLWVVAKVAHVTKQGLELTAAAV*GRTSGP
Trigger: GGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGT...AAGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAWSCRR*ACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCA...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKPVDGG*WLGPVG
Trigger: TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGG...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCAGCAGGGCTTTGTGCTaGCCAGAGGGTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSISRALC*PEGPCS
Trigger: TGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCT...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCCCCGTTGGGTCCATCTaGTGCTCGAGGATGAAAAAC +
Preference number: 4 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAPVGSI*CSRMKN
Trigger: GTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGCAGAAATTCCCCGTTaGGTCCATCTGGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVAEIPR*VHLVLE
Trigger: CTCGAGCACCAGATGGACCCAACGGGGAATTTCTGC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRAVDGFCGLQLFLVPQLFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...GAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGTGGTCCCACCCTCTaGGGCAGTGTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGASGPTL*GSVVSL
Trigger: CAAGGACACAACACTGCCCCAGAGGGTGGGACCACT...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGCAGGGTGAGGGACCATaGGTGGAATGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWQGEGP*VEWQWL
Trigger: CAGCCACTGCCATTCCACCCATGGTCCCTCACCCTG...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGAGAGCCTGTAGGAGCTaGTGCATCCTCTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVRACRS*CILFRY
Trigger: ATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCT...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp GCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGTGGCCGGTAGCACAGCCTGTTaGACCATTTCACATAAGCCT +
Preference number: 4 (lower is better)
Translates to: AVAPEVPKPRGDRLWVVAGSTAC*TISHKP
Trigger: AGGCTTATGTGAAATGGTTCAACAGGCTGTGCTACC...GGCCACCACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGITWAL*FFLAGM
Trigger: CATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGAT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTTTCATGTCTTCCCCAAAAATGAACTCCCCCACCTaGTTGGCCAGCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GLQLFLVPQLSAFMSSPKMNSPT*LASSRN
Trigger: ATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCAT...TTTTGGGGAAGACATGAAAGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 4 (lower is better)
Translates to: VCPVDAFHSCHRKAISWGVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...GCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTGTGATGCTGGCGTCTTaGTCGAAGGGACACTCCACT +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRAVMLAS*SKGHST
Trigger: AGTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCAC...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTGACAATCTTGTGATCTaGTCGCCTCGGCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGDNLVI*SPRPPK
Trigger: CTTGGGAGGCCGAGGCGAGCAGATCACAAGATTGTC...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGVDGGW*LGPVGD
Trigger: ATCTCCTACAGGACCAAGCCACCAGCCTCCATCCAC...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGCTGCTTCTTCTTGGCTaGCATGCAGATCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQLLLLG*HADLSC
Trigger: GCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAG...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCACAGACTGTGGGTGGTaGCCAAAGTGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSITDCGW*PKWHMS
Trigger: TGACATGTGCCACTTTGGCCACCACCCACAGTCTGT...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTGTACAGGTAGTGGGTaGTGCTGGCGTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGCTGSG*CWRLAR
Trigger: TCGAGCAAGACGCCAGCATCACCCACTACCTGTACA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGCTTTCATGTCTTCCCCAAAAACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLQLFLVPQLSAFMSSPKTTSLR*PIVDSS
Trigger: GGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGT...TTTTGGGGAAGACATGAAAGCGCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QTVGGGQSGTCHQARSRATTSLR*PIVDSS
Trigger: GGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGT...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGTTSLR*PIVDSS
Trigger: GGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGATAAAAGGTCTCCTGTaGCCGTATGGCCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKIKGLL*PYGHCG
Trigger: CCCACAGTGGCCATACGGGCACAGGAGACCTTTTAT...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CTTCCTCGTCCCTCAGCTCAGCGCTTTCATGTCTTCCCCAAAATAGAAGATCTTCCTCCTTCTCTCGGCTaGTGTGGGCCGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPRPSAQRFHVFPKIEDLPPSLG*CGPSGS
Trigger: GCTCCCTGACGGCCCACAGCAGCCGAGAGAAGGAGG...AAGATCTTCTATTTTGGGGAAGACATGAAAGCGCTGAGCTGAGGGACGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTGATGAACTCCCCCACCTGCTTGGCCAGCTCCAGGAATTTCTCAAAGTTGACGTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: VMNSPTCLASSRNFSKLTWSCRR*ACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCA...CGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGCTGCTTCTTCTTGGCTaGCATGCAGATCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVLLLLG*HADLSC
Trigger: GCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAG...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp TCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTAAGAACTCAATCACCTaGGCCCTCTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SRRTVMPAVAPEVPKPRGKNSIT*ALCFFL
Trigger: CAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTT...ACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGAGAGCCTGTAGGAGCTaGTGCATCCTCTTCCGGTAT +
Preference number: 4 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWRACRS*CILFRY
Trigger: ATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCT...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTCCAGTTTGTCCTGTTaGCGCGTTCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGSSLSC*RVPQLS
Trigger: TGACAGCTGTGGAACGCGTCAACAGGACAAACTGGA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp TTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCGTTGGGTCCATCTGGTaGTCGAGGATGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: LTRSTAVTGKLSPGASSIVGSIW*SRMKNL
Trigger: CAAGTTTTTCATCCTCGAGCACCAGATGGACCCAAC...GATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTATAGTCGACTCTTCCTaGAAGTCCCTTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGIVDSS*KSLGKV
Trigger: GACCTTCCCAAGGGACTTCCAGGAAGAGTCGACTAT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTGCTTCTTCTTGGCTaGCATGCAGATCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGLLLLG*HADLSC
Trigger: GCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAG...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGAAGAACTCAATCACCTaGGCCCTCTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVKNSIT*ALCFFL
Trigger: CAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTT...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGTTGGGTCCATCTGGTaGTCGAGGATGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKVGSIW*SRMKNL
Trigger: CAAGTTTTTCATCCTCGAGCACCAGATGGACCCAAC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp GTGATGAACTCCCCCACCTGCTTGGCCAGCTCCAGGAATTTCTCAAAGTTGACGCCCTCTGCTTCTTCTTaGCTGGCATGCAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: VMNSPTCLASSRNFSKLTPSASS*LACRSQ
Trigger: CTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGG...CGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGAAGAACTCAATCACCTaGGCCCTCTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKKNSIT*ALCFFL
Trigger: CAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTT...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTTCTCCGTCTTCTCATaGCCTCTCAACTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGFSVFS*PLNSPA
Trigger: TGCAGGAGAGTTGAGAGGCCATGAGAAGACGGAGAA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR TCA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCTGGTGCTCGAGGATaGAAAACTTGGCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAISGARG*KTWPSS
Trigger: TGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGA...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp GTGATGAACTCCCCCACCTGCTTGGCCAGCTCCAGGAATTTCTCAAAGTTGACGCACAGGGTCGGCATTTaGAAAATAGTGAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: VMNSPTCLASSRNFSKLTHRVGI*KIVRHS
Trigger: GGAGTGCCTCACTATTTTGCAAATGCCGACCCTGTG...CGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTTCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCCCCTCTGCTTCTTCTTaGCTGGCATGCAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAIPSASS*LACRSQ
Trigger: CTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGG...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR TCA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCGGAATTTCTCAAAGTTaGCGTGTCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAIGISQS*RVHWEG
Trigger: GCCTTCCCAATGGACACGTCAACTTTGAGAAATTCC...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR GCA 90 bp CTTCCTCGTCCCTCAGCTCAGCGCTTTCATGTCTTCCCCAAAATAGAAGATCTTGGGCTGTCCTGTAGTTaGAGAAATTCCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LPRPSAQRFHVFPKIEDLGLSCS*RNSPLG
Trigger: ACCCAACGGGGAATTTCTGCAACTACAGGACAGCCC...AAGATCTTCTATTTTGGGGAAGACATGAAAGCGCTGAGCTGAGGGACGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CCA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTTCTGTTTGGTTCTCTaGGCTCTCACTTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGFCLVL*ALTFVR
Trigger: TCTTACGAAAGTGAGAGCCCAGAGAACCAAACAGAA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 90 bp GGCACCGCGCTCGTGAGGGGCGCCGGGTGGGCACGTGAGCCTCACTaGGCGTCCTTGCGGGTCTGGCCGCCCGGGGCAGGCAGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: GTALVRGAGWAREPH*ASLRVWPPGAGRAS
Trigger: CGAGGCCCTGCCTGCCCCGGGCGGCCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 90 bp GCCTACGGGCAAGCGAGGGGCACCGCGCTCGTGAGGGGCGCCGGGTaGGCACGTGAGCCTCACTGCGCGTCCTTGCGGGTCTGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AYGQARGTALVRGAG*AREPHCASLRVWPP
Trigger: GGGCGGCCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCCCCTCGCTTGCCCGTAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS TCA 90 bp ACTTCCGGACCCGGGCCTACGGGCAAGCGAGGGGCACCGCGCTCGTaGGGGGCGCCGGGTGGGCACGTGAGCCTCACTGCGCGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TSGPGPTGKRGAPRS*GAPGGHVSLTARPC
Trigger: GCAAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCCCCTCGCTTGCCCGTAGGCCCGGGTCCGGAAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 90 bp TGCTCGCCTCGGCCTCCCAAGGTGGCCTCCTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGGGCCGCCCCGCGCAGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: CSPRPPKVASFSRLL*AVRERWAAPRRAVL
Trigger: CAGGACAGCCCTGCGCGGGGCGGCCCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAAGGAGGCCACCTTGGGAGGCCGAGGCGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCCTCACTGCGCGTCCTaGCGGGTCTGGCCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: QDVPKACAARTSGGPGSCPHCAS*RVWPPG
Trigger: CCCGGGCGGCCAGACCCGCAAGGACGCGCAGTGAGG...GCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS GCA 90 bp TTCCGGACCCGGGCCTTGTCCAGCACCGGCTTGTCCAGCTGCTGCTaGTCGATGCACAGGTGGCAGACCCGGGCCAGGAGCTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: FRTRALSSTGLSSCC*SMHRWQTRARSSRG
Trigger: GCCCCGGGAGCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS GCA 90 bp AACTTCCGGACCCGGGCCTTGTCCAGCACCGGCTTGTCCAGCTGCTaGTGCTCGATGCACAGGTGGCAGACCCGGGCCAGGAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: NFRTRALSSTGLSSC*CSMHRWQTRARSSR
Trigger: CCGGGAGCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAAGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 90 bp CCCTTGGGAAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCCGGGCCTACGGGCAAGCGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PLGRSRSTRPTAAAV*GRTSGPGPTGKRGA
Trigger: TGCCCCTCGCTTGCCCGTAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTTCCCAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000522500.5
CDS-3UTR CAA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGTTCCGGACCCGGGCCTaGTCCAGCACCGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AASRKGVPGAAETSSSAGFRTRA*SSTGLS
Trigger: GGACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAA...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CAA 90 bp GTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCTGCCAGGGCGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 5 (lower is better)
Translates to: VPKACAARTSGGPGSCQGGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...GCCCTGGCAGGACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS TCA 90 bp GTCGGCTGTGGGCACCAGGTGCTGGATCAGTGTTTCCAGGGAGGCTaGGGATGGCGCTCCATCCAGGAGGGGCTGCCCAGCCTGTTCGCC +
Preference number: 5 (lower is better)
Translates to: VGCGHQVLDQCFQGG*GWRSIQEGLPSLFA
Trigger: GGCGAACAGGCTGGGCAGCCCCTCCTGGATGGAGCGCCATCCTCAGCCTCCCTGGAAACACTGATCCAGCACCTGGTGCCCACAGCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 90 bp TTGTCCAGCACCGGCTTGTCCAGCTGCTGCTGCTCGATGCACAGGTaGCAGACCCGGGCCAGGAGCTCCCGGGGCTCGATGAAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: LSSTGLSSCCCSMHR*QTRARSSRGSMKRR
Trigger: TCGCCTCTTCATCGAGCCCCGGGAGCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGTTCCGGACCCGGGCCTaGTCCAGCACCGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QQHPGRGYLGLQRQARRQFRTRA*SSTGLS
Trigger: GGACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAA...CTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS-3UTR CAA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: HWATEAGLWTASAGSSSSPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGGGCAGGGCCATCTCTaGCTCTGGCCTTTCTGCGGT +
Preference number: 5 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVGQGHL*LWPFCG
Trigger: ACCGCAGAAAGGCCAGAGCAAGAGATGGCCCTGCCC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 90 bp CCCTTGGGAAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCCGGGCCTTGTCCAGCACCGGCTTGT +
Preference number: 5 (lower is better)
Translates to: PLGRSRSTRPTAAAV*GRTSGPGPCPAPAC
Trigger: ACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTTCCCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 90 bp GGAGCTCCCTGTGGATGGAGGCTGGTGGCTTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCAGACCTTCTGGCCCCTGGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GAPCGWRLVAWSCRR*ACRHPPDLLAPGAE
Trigger: CTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTTCCGGACCCGGGCCTaGTCCAGCACCGGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDFRTRA*SSTGLS
Trigger: GGACAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAA...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 90 bp GGGGTCGCTGCAGACACCAAGGAGCTCCCTGTGGATGGAGGCTGGTaGCTTGGTCCTGTAGGAGATGGGCTTGTCGGCACCCACCAGACC +
Preference number: 5 (lower is better)
Translates to: GVAADTKELPVDGGW*LGPVGDGLVGTHQT
Trigger: GGTCTGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGGTGTCTGCAGCGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCCTGGCCAGAGGGTCCTaGTTCACAAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPLARGS*FTKAWT
Trigger: TGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAG...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTGGCCAGAGGGTCCTaGTTCACAAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: EWQWLPVGSGLAQASHVALARGS*FTKAWT
Trigger: TGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAG...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GGCAGGGTGAGGGACCATGGGTGGAATGGCAGTGGCTGCCAGTGGGCTCGGGGCGCCCTCTGCTTCTTCTaGGCTGGCATGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: GRVRDHGWNGSGCQWARGALCFF*AGMQIS
Trigger: TGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGC...GCCCCGAGCCCACTGGCAGCCACTGCCATTCCACCCATGGTCCCTCACCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHNSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 5 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACGGGGGCACACCTGAGTaGGGTGCACCTGAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDGGTPE*GAPEWE
Trigger: CTCCCACTCAGGTGCACCCAACTCAGGTGTGCCCCC...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CAA 90 bp AGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCTCAGCTCAGCCTGGCCAGAGGGTCCTaGTTCACAAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: RAVDGFCGLQLFLVPQLSLARGS*FTKAWT
Trigger: TGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAG...GCTGAGCTGAGGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTCGTCCCGCCCTCTGCTTCTTCTaGGCTGGCATGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: PLRQGCGRLLRAPALPRPALCFF*AGMQIS
Trigger: TGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGC...GGGACGAGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTTTGAAGTTGCCGATGTaGAAGCACTCGCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGLKLPM*KHSRAT
Trigger: CGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAA...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGTGCAGAAATTCCCCGTaGGGTCCATCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLCRNSP*GPSGAR
Trigger: TCGAGCACCAGATGGACCCAACGGGGAATTTCTGCA...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: AASRKGVPGAAETSSSAGNSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...CCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: GPTVLKAGCPQGMCRPHVPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...GACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACCTGGCCTTTCTGCGGTaGACGGCTCCATCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDLAFLR*TAPSSL
Trigger: CAGGGAGGATGGAGCCGTCAACCGCAGAAAGGCCAG...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 90 bp CGCTGCAGACACCAAGGAGCTCCCTGTGGATGGAGGCTGGTGGCTTaGTCCTGTAGGAGATGGGCTTGTCGGCACCCACCAGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: RCRHQGAPCGWRLVA*SCRRWACRHPPDLL
Trigger: CAGAAGGTCTGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGGTGTCTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGCTGGCCAGAGGGTCCTaGTTCACAAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: SSIQEGGTWGCRDKLVGRLARGS*FTKAWT
Trigger: TGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAG...CCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGTCCAGGTTGCTGGTCTaGTCACTGAAGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLSRLLV*SLKQGF
Trigger: AAAGCCCTGCTTCAGTGACAAGACCAGCAACCTGGA...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCACTCCAGGTTGCTGGTCTaGTCACTGAAGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: NGSGCQWARGWRRHLTSHSRLLV*SLKQGF
Trigger: AAAGCCCTGCTTCAGTGACAAGACCAGCAACCTGGA...GTGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GAATGGCAGTGGCTGCCAGTGGGCTCGGGGCTGGCGCAGGCATCTCACGTCGCATCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: EWQWLPVGSGLAQASHVASRMKN*AVLTLA
Trigger: GGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGA...TGCGACGTGAGATGCCTGCGCCAGCCCCGAGCCCACTGGCAGCCACTGCCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGGAGGCCCTGGGTCCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: KAGCPQGMCRPHVWRPWVPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...GACCCAGGGCCTCCAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGVQFVL*TRSTAV
Trigger: GACAGCTGTGGAACGCGTCAACAGGACAAACTGGAC...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAGGGTGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SRKGVPGAAETSSSAGQGVQFVL*TRSTAV
Trigger: GACAGCTGTGGAACGCGTCAACAGGACAAACTGGAC...ACCCTGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTTGCAGGACCCATCTCTaGTCTACTCCTCTTGCCCCA +
Preference number: 5 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPCRTHL*STPLAP
Trigger: TGGGGCAAGAGGAGTAGACAAGAGATGGGTCCTGCA...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS GCA 90 bp TATGCCTCGTCACAGGGGGCGATGCGGCCCACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCCTGGAAGTCCCTTGGGAAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: YASSQGAMRPTTSLR*PIVDSSWKSLGKVS
Trigger: CGAGACCTTCCCAAGGGACTTCCAGGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGTGGGCCGCATCGCCCCCTGTGACGAGGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 90 bp AAGCAGGGCTTTGTGCTGGCCAGAGGGTCCTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCGATGTGCCGCAGCCGCTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KQGFVLARGSLFTKA*TNSSGPMCRSRSSS
Trigger: GGAACTGGAGCGGCTGCGGCACATCGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACC +
Preference number: 5 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQNSCSS*GPNFRT
Trigger: GGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTT...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTTGAAGTTGCCGATGTaGAAGCACTCGCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDLKLPM*KHSRAT
Trigger: CGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAA...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCTCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGSRMKN*AVLTLA
Trigger: GGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGA...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDNSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCAGTGGTCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 5 (lower is better)
Translates to: AVVPPSGAVLCPCRGWTDGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...GTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGACCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 5 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCATCCAGGTTGCTGGTCTaGTCACTGAAGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRASRLLV*SLKQGF
Trigger: AAAGCCCTGCTTCAGTGACAAGACCAGCAACCTGGA...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TCCCACCCTCTGGGGCAGTGTTGTGTCCTTGCCGAGGATGGACAGACTGACCAGTTGAAGTTGCCGATGTaGAAGCACTCGCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: SHPLGQCCVLAEDGQTDQLKLPM*KHSRAT
Trigger: CGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAA...CTGGTCAGTCTGTCCATCCTCGGCAAGGACACAACACTGCCCCAGAGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACC +
Preference number: 5 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGANSCSS*GPNFRT
Trigger: GGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTT...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGATGGACAGACTGACCAGGCCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGTCCAGGTTGCTGGTCTaGTCACTGAAGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RMDRLTRPHGPEGRMSPRSRLLV*SLKQGF
Trigger: AAAGCCCTGCTTCAGTGACAAGACCAGCAACCTGGA...CCTTGGGGACATCCTGCCTTCAGGACCGTGGGGCCTGGTCAGTCTGTCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCGCCCTCTGCTTCTTCTaGGCTGGCATGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAALCFF*AGMQIS
Trigger: TGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGC...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGTTGAAGTTGCCGATGTaGAAGCACTCGCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVLKLPM*KHSRAT
Trigger: CGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAA...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCTGCAGAAATTCCCCGTaGGGTCCATCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: RHLTSHRDACCGSRSSQACRNSP*GPSGAR
Trigger: TCGAGCACCAGATGGACCCAACGGGGAATTTCTGCA...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCAGGGCCAAAGTCCCATAAAAGGTCTCCTGTGCCCGTATGGCCACTGTGGGGGTGCAGAAATTCCCCGTaGGGTCCATCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: PGPKSHKRSPVPVWPLWGCRNSP*GPSGAR
Trigger: TCGAGCACCAGATGGACCCAACGGGGAATTTCTGCA...CCCCCACAGTGGCCATACGGGCACAGGAGACCTTTTATGGGACTTTGGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCCCACGGTCCTGAAGGCAGGATGTCCCCAAGGCATGTGCCGCCCGCACGTCTGAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PHGPEGRMSPRHVPPARLRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...CAGACGTGCGGGCGGCACATGCCTTGGGGACATCCTGCCTTCAGGACCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HWATEAGLWTASAGSSSSRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...GGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGGTGATGCTGGCGTCTaGCTCGAAGGGACACTCCAC +
Preference number: 5 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKGDAGV*LEGTLH
Trigger: GTGGAGTGTCCCTTCGAGCAAGACGCCAGCATCACC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGCCCTCTGGGGCAGTGTaGTGTCCTTGCCGAGGATGG +
Preference number: 5 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGPSGAV*CPCRGW
Trigger: CCATCCTCGGCAAGGACACAACACTGCCCCAGAGGG...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGGCATCTCACGTCGCACCGTGATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RHLTSHRDACCGSRSSQAVQFVL*TRSTAV
Trigger: GACAGCTGTGGAACGCGTCAACAGGACAAACTGGAC...GGCTTGGGAACTTCTGGAGCCACAGCAGGCATCACGGTGCGACGTGAGATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTTCTTGTCTACTCCTCTaGCCCCACTCAGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGSCLLL*PHSGAG
Trigger: GCCTGCCCCTGAGTGGGGCAAGAGGAGTAGACAAGA...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS CCA 90 bp CCCCCACAGCCACTTTGTGCCAGCTTGAGTCCAGTGGTCACTTCCTaGGAGTATTGTCAGGGCCCCTTCCTCACAGCACAGCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: PPQPLCASLSPVVTS*EYCQGPFLTAQPSF
Trigger: GAATGAAGGCTGTGCTGTGAGGAAGGGGCCCTGACAATACTCCCAGGAAGTGACCACTGGACTCAAGCTGGCACAAAGTGGCTGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CAA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCCTGGCCAGAGGGTCCTaGTTCACAAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGALARGS*FTKAWT
Trigger: TGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAG...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCTTGAAGTTGCCGATGTaGAAGCACTCGCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGALKLPM*KHSRAT
Trigger: CGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAA...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCTCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLTRSTAVTGKLSPGASSSRMKN*AVLTLA
Trigger: GGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGA...GCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CTGTCACCGGAAAGCTATCTCCTGGGGCCAGCAGCATCCAGGAAGGGGGTACCTTCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPESYLLGPAASRKGVPSRMKN*AVLTLA
Trigger: GGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGA...AGGTACCCCCTTCCTGGATGCTGCTGGCCCCAGGAGATAGCTTTCCGGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ATGCCTGCTGTGGCTCCAGAAGTTCCCAAGCCACGTGGTGACAGACTGTGGGTGTGCAGAAATTCCCCGTaGGGTCCATCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: MPAVAPEVPKPRGDRLWVCRNSP*GPSGAR
Trigger: TCGAGCACCAGATGGACCCAACGGGGAATTTCTGCA...CACCCACAGTCTGTCACCACGTGGCTTGGGAACTTCTGGAGCCACAGCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ACTGGGCCACTGAGGCAGGGCTGTGGACGGCTTCTGCGGGCTCCAGCTCTTCCTAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TGPLRQGCGRLLRAPALPRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...AGGAAGAGCTGGAGCCCGCAGAAGCCGTCCACAGCCCTGCCTCAGTGGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp GCCAGCAGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: ASSIQEGGTWGCRDKLVGRNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...GCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTAACTCCCCCACCTGCTaGGCCAGCTCCAGGAATTTC +
Preference number: 5 (lower is better)
Translates to: RGDRLWVVAKVAHVTKQGNSPTC*ASSRNF
Trigger: GAAATTCCTGGAGCTGGCCAAGCAGGTGGGGGAGTT...ACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCGGCAGTGTTGTGTCCTaGCCGAGGATGGACAGACTG +
Preference number: 5 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAGSVVS*PRMDRL
Trigger: CAGTCTGTCCATCCTCGGCAAGGACACAACACTGCC...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 90 bp AGCACAGCCTTCATTCTCCGTCTTCTCATGGCCTCTCAACTCTCCTaGAGGACCCATCTCTTGTCTACTCCTCTTGCCCCACTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: STAFILRLLMASQLS*RTHLLSTPLAPLRG
Trigger: GCCCCTGAGTGGGGCAAGAGGAGTAGACAAGAGATGGGTCCTGCAGGAGAGTTGAGAGGCCATGAGAAGACGGAGAATGAAGGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS-3UTR CAA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTGCAGAAATTCCCCGTaGGGTCCATCTGGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: QTVGGGQSGTCHQARSRACRNSP*GPSGAR
Trigger: TCGAGCACCAGATGGACCCAACGGGGAATTTCTGCA...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AGCATCCAGGAAGGGGGTACCTGGGGCTGCAGAGACAAGCTCGTCGGCAGGGCAAGGAATTTCTCAAAGTaGACGTGTCCATTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SIQEGGTWGCRDKLVGRARNFSK*TCPLGR
Trigger: CCTTCCCAATGGACACGTCAACTTTGAGAAATTCCT...TGCCCTGCCGACGAGCTTGTCTCTGCAGCCCCAGGTACCCCCTTCCTGGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp AAGCCACGTGGTGACAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: KPRGDRLWVVAKVAHVTKVQFVL*TRSTAV
Trigger: GACAGCTGTGGAACGCGTCAACAGGACAAACTGGAC...CTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTGTCACCACGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGACTGTGGGTGGTGGCCAAAGTGGCACATGTCACCAAGCAAGGTCTCGAGCTTCCAGGTTGCTGGTCTaGTCACTGAAGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: QTVGGGQSGTCHQARSRASRLLV*SLKQGF
Trigger: AAAGCCCTGCTTCAGTGACAAGACCAGCAACCTGGA...AGCTCGAGACCTTGCTTGGTGACATGTGCCACTTTGGCCACCACCCACAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCCTCTGCTTCTTCTaGGCTGGCATGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGALCFF*AGMQIS
Trigger: TGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGC...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp TTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGGCCCCACAGGGTCGGCATTaGCAAAATAGTGAGGCACTC +
Preference number: 5 (lower is better)
Translates to: FVLLTRSTAVTGKLSPGAPQGRH*QNSEAL
Trigger: GAGTGCCTCACTATTTTGCAAATGCCGACCCTGTGG...GGCCCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTCCAGTTTGTCCTGTaGACGCGTTCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PVCPVDAFHSCHRKAISWVQFVL*TRSTAV
Trigger: GACAGCTGTGGAACGCGTCAACAGGACAAACTGGAC...CCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp CAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCTCCTGGGTCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: QFVLLTRSTAVTGKLSPGSRMKN*AVLTLA
Trigger: GGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGA...CCCAGGAGATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS-3UTR CAA 90 bp ATGTGTCCAGTTTGTCCTGTTGACGCGTTCCACAGCTGTCACCGGAAAGCTATCCCACTTTGTGCCAGCTaGAGTCCAGTGGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: MCPVCPVDAFHSCHRKAIPLCAS*SPVVTS
Trigger: GGAAGTGACCACTGGACTCAAGCTGGCACAAAGTGG...GATAGCTTTCCGGTGACAGCTGTGGAACGCGTCAACAGGACAAACTGGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS TCA 72 bp GGGCACCGCGCTCGTGAGGGGCGCCGGGTGGGCACGTaGGCCTCACTGCGCGTCCTTGCGGGTCTGGCCGCC +
Preference number: 6 (lower is better)
Translates to: GHRAREGRRVGT*ASLRVLAGLAA
Trigger: GGCGGCCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS TCA 72 bp CCCGGGCCTACGGGCAAGCGAGGGGCACCGCGCTCGTaGGGGGCGCCGGGTGGGCACGTGAGCCTCACTGCG +
Preference number: 6 (lower is better)
Translates to: PGPTGKRGAPRS*GAPGGHVSLTA
Trigger: CGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCCCCTCGCTTGCCCGTAGGCCCGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS GCA 72 bp CTCGTGAGGGGCGCCGGGTGGGCACGTGAGCCTCACTaGGCGTCCTTGCGGGTCTGGCCGCCCGGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LVRGAGWAREPH*ASLRVWPPGAG
Trigger: GCCTGCCCCGGGCGGCCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGCCCACCCGGCGCCCCTCACGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 72 bp CGGCCTCCCAAGGTGGCCTCCTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGGGCCGCCCCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: RPPKVASFSRLL*AVRERWAAPRR
Trigger: CCTGCGCGGGGCGGCCCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAAGGAGGCCACCTTGGGAGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000615330.4
CDS CCA 72 bp TGGGCACGTGAGCCTCACTGCGCGTCCTTGCGGGTCTaGCCGCCCGGGGCAGGCAGGGCCTCGTGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: WAREPHCASLRV*PPGAGRASCPL
Trigger: GAGAGGGCACGAGGCCCTGCCTGCCCCGGGCGGCCAGACCCGCAAGGACGCGCAGTGAGGCTCACGTGCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS GCA 72 bp CGGGCCTTGTCCAGCACCGGCTTGTCCAGCTGCTGCTaGTCGATGCACAGGTGGCAGACCCGGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RALSSTGLSSCC*SMHRWQTRARS
Trigger: GCTCCTGGCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAAGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS GCA 72 bp ACCCGGGCCTTGTCCAGCACCGGCTTGTCCAGCTGCTaGTGCTCGATGCACAGGTGGCAGACCCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TRALSSTGLSSC*CSMHRWQTRAR
Trigger: CCTGGCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAAGGCCCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CAA 90 bp TCCCTTGGGAAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACCCGGGCCTACGGGCAAGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: SLGKVSVHSANSCSS*GPNFRTRAYGQARG
Trigger: GCCCCTCGCTTGCCCGTAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTTCCCAAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000522500.5
CDS TCA 72 bp GGGCACCAGGTGCTGGATCAGTGTTTCCAGGGAGGCTaGGGATGGCGCTCCATCCAGGAGGGGCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GHQVLDQCFQGG*GWRSIQEGLPS
Trigger: GCTGGGCAGCCCCTCCTGGATGGAGCGCCATCCTCAGCCTCCCTGGAAACACTGATCCAGCACCTGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS GCA 72 bp TCCCTTGGGAAGGTCTCGGTCCACTCGGCCAACAGCTaGAGCAGTTTGGGGCCGAACTTCCGGACCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SLGKVSVHSANS*SSLGPNFRTRA
Trigger: GGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTTCCCAAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 72 bp AGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCCGGGCCTACGGGCAAG +
Preference number: 6 (lower is better)
Translates to: RSRSTRPTAAAV*GRTSGPGPTGK
Trigger: CTTGCCCGTAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000522500.5
CDS CAA 90 bp TCCCTTGGGAAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACCCGGGCCTTGTCCAGCACCGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLGKVSVHSANSCSS*GPNFRTRALSSTGL
Trigger: CAAGCCGGTGCTGGACAAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTTCCCAAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 72 bp AGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTTaGGGCCGAACTTCCGGACCCGGGCCTTGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RSRSTRPTAAAV*GRTSGPGPCPA
Trigger: TGCTGGACAAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CCA 72 bp CTGAAGAAAGGAATGACAATCTTCTCTCGGCTGCTGTaGGCCGTCAGGGAGCGGTGGGCCGCCCCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LKKGMTIFSRLL*AVRERWAAPRR
Trigger: CCTGCGCGGGGCGGCCCACCGCTCCCTGACGGCCCACAGCAGCCGAGAGAAGATTGTCATTCCTTTCTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000522500.5
CDS CAA 72 bp AAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACCCGGGCCTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: KVSVHSANSCSS*GPNFRTRALSS
Trigger: GCTGGACAAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000615330.4
CDS CAA 72 bp AAGGTCTCGGTCCACTCGGCCAACAGCTGCAGCAGTTaGGGGCCGAACTTCCGGACCCGGGCCTACGGGCAA +
Preference number: 6 (lower is better)
Translates to: KVSVHSANSCSS*GPNFRTRAYGQ
Trigger: TTGCCCGTAGGCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520209.5
ENST00000522500.5
CDS GCA 72 bp TCACAGGGGGCGATGCGGCCCACGACGTCCTTAAGGTaGCCGATAGTCGACTCTTCCTGGAAGTCCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SQGAMRPTTSLR*PIVDSSWKSLG
Trigger: CCCAAGGGACTTCCAGGAAGAGTCGACTATCGGGCACCTTAAGGACGTCGTGGGCCGCATCGCCCCCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 72 bp TTCACAAAGGCCTGGACAAACTCCTCAGGCCCGATGTaGCGCAGCCGCTCCAGTTCCACGTGGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: FTKAWTNSSGPM*RSRSSSTWVSC
Trigger: GCAGCTGACCCACGTGGAACTGGAGCGGCTGCGGCACATCGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 72 bp TGTGGATGGAGGCTGGTGGCTTGGTCCTGTAGGAGATaGGCTTGTCGGCACCCACCAGACCTTCTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: CGWRLVAWSCRR*ACRHPPDLLAP
Trigger: AGGGGCCAGAAGGTCTGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 72 bp CACCAAGGAGCTCCCTGTGGATGGAGGCTGGTGGCTTaGTCCTGTAGGAGATGGGCTTGTCGGCACCCACCA +
Preference number: 6 (lower is better)
Translates to: HQGAPCGWRLVA*SCRRWACRHPP
Trigger: TGGTGGGTGCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 72 bp GCTGCAGACACCAAGGAGCTCCCTGTGGATGGAGGCTaGTGGCTTGGTCCTGTAGGAGATGGGCTTGTCGGC +
Preference number: 6 (lower is better)
Translates to: AADTKELPVDGG*WLGPVGDGLVG
Trigger: GCCGACAAGCCCATCTCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGGTGTCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CCA 72 bp GCCTGGGGTGACCATGTCGGAGGCACTCAGCGTCTGTaGCATGTCTGCCTGCAATGGCAAGGAGCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: AWGDHVGGTQRL*HVCLQWQGAVR
Trigger: CCTCACTGCTCCTTGCCATTGCAGGCAGACATGCCACAGACGCTGAGTGCCTCCGACATGGTCACCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS CAA 72 bp TGGGCAGGGCCATCTCTTGCTCTGGCCTTTCTGCGGTaGACGGCTCCATCCTCCCTGGTGAGTCTTCGCGCT +
Preference number: 6 (lower is better)
Translates to: WAGPSLALAFLR*TAPSSLVSLRA
Trigger: AGCGCGAAGACTCACCAGGGAGGATGGAGCCGTCAACCGCAGAAAGGCCAGAGCAAGAGATGGCCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522500.5
CDS CCA 72 bp TTTGTGCTGGCCAGAGGGTCCTTGTTCACAAAGGCCTaGACAAACTCCTCAGGCCCGATGTGCCGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: FVLARGSLFTKA*TNSSGPMCRSR
Trigger: GCGGCTGCGGCACATCGGGCCTGAGGAGTTTGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAGCACAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000519883.1
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS CAA 72 bp CTCATGGCCTCTCAACTCTCCTGCAGGACCCATCTCTaGTCTACTCCTCTTGCCCCACTCAGGGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LMASQLSCRTHL*STPLAPLRGRP
Trigger: AGGCCTGCCCCTGAGTGGGGCAAGAGGAGTAGACAAGAGATGGGTCCTGCAGGAGAGTTGAGAGGCCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS CAA 90 bp CTCCGTCTTCTCATGGCCTCTCAACTCTCCTGCAGGACCCATCTCTaGTCTACTCCTCTTGCCCCACTCAGGGGCAGGCCTCTTCTAGAT +
Preference number: 6 (lower is better)
Translates to: LRLLMASQLSCRTHL*STPLAPLRGRPLLD
Trigger: ATCTAGAAGAGGCCTGCCCCTGAGTGGGGCAAGAGGAGTAGACAAGAGATGGGTCCTGCAGGAGAGTTGAGAGGCCATGAGAAGACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS CCA 72 bp CCACTTTGTGCCAGCTTGAGTCCAGTGGTCACTTCCTaGGAGTATTGTCAGGGCCCCTTCCTCACAGCACAG +
Preference number: 6 (lower is better)
Translates to: PLCASLSPVVTS*EYCQGPFLTAQ
Trigger: CTGTGCTGTGAGGAAGGGGCCCTGACAATACTCCCAGGAAGTGACCACTGGACTCAAGCTGGCACAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6
CDS CAA 72 bp CCCGTTGGGTCCATCTGGTGCTCGAGGATGAAAAACTaGGCCGTCCTCACTTTGGCCCAGGTCTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PVGSIWCSRMKN*AVLTLAQVFFS
Trigger: GCTGAAGAAGACCTGGGCCAAAGTGAGGACGGCCAAGTTTTTCATCCTCGAGCACCAGATGGACCCAACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 72 bp GCCACGTCGATGAAGAACTCAATCACCTGGGCCCTCTaGTTCTTCTTGGCTGGCATGCAGATCTCAGTTGCC +
Preference number: 6 (lower is better)
Translates to: ATSMKNSITWAL*FFLAGMQISVA
Trigger: GGCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTTCATCGACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 72 bp GGGCCCTCTGCTTCTTCTTGGCATGCAGATCTCAGTTaGCACCAGGTAGCACAGCCTGTTGAACCATTTCAC +
Preference number: 6 (lower is better)
Translates to: GPSASSWHADLS*HQVAQPVEPFH
Trigger: GTGAAATGGTTCAACAGGCTGTGCTACCTGGTGGCAACTGAGATCTGCATGCCAAGAAGAAGCAGAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519883.1
CDS GCA 72 bp GCCACGTCGATGAAGAACTCAATCACCTGGGCCCTCTaGTTCTTCTTGGCATGCAGATCTCAGTTGCCACCA +
Preference number: 6 (lower is better)
Translates to: ATSMKNSITWAL*FFLACRSQLPP
Trigger: TGGTGGCAACTGAGATCTGCATGCCAAGAAGAAGCAGAGGGCCCAGGTGATTGAGTTCTTCATCGACGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519883.1
CDS GCA 72 bp CCTCTGCTTCTTCTTGGCTGGCATGCAGATCTCAGTTaGCACCAGGTAGCACAGCCTGTTGAACCATTTCAC +
Preference number: 6 (lower is better)
Translates to: PLLLLGWHADLS*HQVAQPVEPFH
Trigger: GTGAAATGGTTCAACAGGCTGTGCTACCTGGTGGCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361132.9
ENST00000393371.6
ENST00000520209.5
ENST00000522500.5
ENST00000615330.4
CDS GCA 72 bp TTCATTCTCCGTCTTCTCATGGCCTCTCAACTCTCCTaGAGGACCCATCTCTTGTCTACTCCTCTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: FILRLLMASQLS*RTHLLSTPLAP
Trigger: TGGGGCAAGAGGAGTAGACAAGAGATGGGTCCTGCAGGAGAGTTGAGAGGCCATGAGAAGACGGAGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393371.6