RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGEF1A (Homo sapiens)

Ensembl gene IDs: ENSG00000198915

Ensembl transcript IDs: ENST00000374455.2, ENST00000374459.5, ENST00000395809.5, ENST00000395810.6, ENST00000472864.1

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGCCTCGCAGCCCAGGCTCCTGAGGGCAGGCGCCCAGGTGGAGTaGGACTCACCGCAGCCCAAACCACAGAGCAGGAAGACCAGACCC +
Preference number: 1 (lower is better)
Translates to: GASQPRLLRAGAQVE*DSPQPKPQSRKTRP
Trigger: GGGTCTGGTCTTCCTGCTCTGTGGTTTGGGCTGCGGTGAGTCCCACTCCACCTGGGCGCCTGCCCTCAGGAGCCTGGGCTGCGAGGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 90 bp TTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATaGAGCCTCGCAGCCCAGGCTCCTGAGGGCAGGCGCCCAGGTGGA +
Preference number: 1 (lower is better)
Translates to: FQKCADATSQPPALL*SLAAQAPEGRRPGG
Trigger: TCCACCTGGGCGCCTGCCCTCAGGAGCCTGGGCTGCGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp ATGCGGAGTTCCTGCGAGGGAGACGGTCCACGTGGATTGACCGTGTaGTTTCTGAAGGACAGCTGTCCTGCGCCATGGTCAGTAGGGCCC +
Preference number: 1 (lower is better)
Translates to: MRSSCEGDGPRGLTV*FLKDSCPAPWSVGP
Trigger: GGGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp GTAAACTTTGGACAGCCCGTACTCAAAGGCTCACTTCCAGAAGTGTaGGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGC +
Preference number: 1 (lower is better)
Translates to: VNFGQPVLKGSLPEV*GRDLPATSPPMEPR
Trigger: GCGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAGTGAGCCTTTGAGTACGGGCTGTCCAAAGTTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp CGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTaGGCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGA +
Preference number: 1 (lower is better)
Translates to: RSTWIDRVLSEGQLS*AMVSRAQGSHHEVR
Trigger: TCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp CACCCAGGCTTCCCCATTGATCAAGGCTCCTGCGGAAACTGGGAATaGAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCA +
Preference number: 1 (lower is better)
Translates to: HPGFPIDQGSCGNWE*RGTRMRSSCEGDGP
Trigger: TGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 90 bp CAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCACGTaGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTGCGCCATG +
Preference number: 1 (lower is better)
Translates to: QRDKDAEFLRGRRST*IDRVLSEGQLSCAM
Trigger: CATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 90 bp CGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTGCGCCATaGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGA +
Preference number: 1 (lower is better)
Translates to: RGLTVCFLKDSCPAP*SVGPRAHTTKSDMG
Trigger: TCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 90 bp CATCCTCACCCAGGCTTCCCCATTGATCAAGGCTCCTGCGGAAACTaGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGAC +
Preference number: 1 (lower is better)
Translates to: HPHPGFPIDQGSCGN*ECRGTRMRSSCEGD
Trigger: GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGGTGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTaGGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAG +
Preference number: 1 (lower is better)
Translates to: SCGNWECRGTRMRSS*EGDGPRGLTVCFLK
Trigger: CTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 90 bp TCCCAATGTCTTCAGGCTCTTCCAGGAGCTTTGGGAATTGGGACCTaGCCCATCCTCACCCAGGCTTCCCCATTGATCAAGGCTCCTGCG +
Preference number: 1 (lower is better)
Translates to: SQCLQALPGALGIGT*PILTQASPLIKAPA
Trigger: CGCAGGAGCCTTGATCAATGGGGAAGCCTGGGTGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAGCCTGAAGACATTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp AGTATGGCCTGGCGAATTTTCTGTTTCCAATTCCAATTAGGGCGCTaGCTACCCAGGTGGGAAGAGGGCTGTTGGCTGCCCTCCCCTCTG +
Preference number: 1 (lower is better)
Translates to: SMAWRIFCFQFQLGR*LPRWEEGCWLPSPL
Trigger: CAGAGGGGAGGGCAGCCAACAGCCCTCTTCCCACCTGGGTAGGCAGCGCCCTAATTGGAATTGGAAACAGAAAATTCGCCAGGCCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR TCA 90 bp ATACAATCTGTACTAGCTAGAACCTCAGAAAGTGCAAACACACTGTaGCAATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGC +
Preference number: 1 (lower is better)
Translates to: IQSVLARTSESANTL*QYSGTIPAPPRTRG
Trigger: GCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATTGTCACAGTGTGTTTGCACTTTCTGAGGTTCTAGCTAGTACAGATTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 90 bp CTTTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTaGATTATGGTACAGCTTCATACTCAGAGTTCATCTCAAATACCA +
Preference number: 1 (lower is better)
Translates to: LLLKQVCPVTPKLTS*IMVQLHTQSSSQIP
Trigger: TGGTATTTGAGATGAACTCTGAGTATGAAGCTGTACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGCTGCCAGGTGCCCCCTaGCCCTCCCTGACCCCACAA +
Preference number: 2 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGLPGAP*PSLTPQ
Trigger: TTGTGGGGTCAGGGAGGGGCAGGGGGCACCTGGCAG...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGCGACGTCAGAGACACTaGCTGGAAAGGCGTCCGAGC +
Preference number: 2 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASRRQRH*LERRPS
Trigger: GCTCGGACGCCTTTCCAGCCAGTGTCTCTGACGTCG...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDCTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTGGCGCCCAGGTGGAGTaGGACTCACCGCAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGGAQVE*DSPQPK
Trigger: TTTGGGCTGCGGTGAGTCCCACTCCACCTGGGCGCC...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGCGCCCAGGTGGAGTaGGACTCACCGCAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDGAQVE*DSPQPK
Trigger: TTTGGGCTGCGGTGAGTCCCACTCCACCTGGGCGCC...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCCCACCAGCCCTCCTATaGAGCCTCGCAGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSPPALL*SLAAQA
Trigger: AGCCTGGGCTGCGAGGCTCCATAGGAGGGCTGGTGG...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGGAAGGACAGCTGTCCTaGGCCATGGTCAGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGEGQLS*AMVSRA
Trigger: GGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTC...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGACGCTGCCTACCCAGGTaGGAAGAGGGCTGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGRCLPR*EEGCWL
Trigger: CAGCCAACAGCCCTCTTCCCACCTGGGTAGGCAGCG...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CAA 90 bp GGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCACGTGGATaGACCGTGTGCTTTCTGAAGGACAGCTGTCCTGCGCCATGGTCA +
Preference number: 2 (lower is better)
Translates to: GTRMRSSCEGDGPRG*TVCFLKDSCPAPWS
Trigger: TGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR TCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGATGGACCCCAACCAGTaGGGCCTCCTCATCTCAACC +
Preference number: 2 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWMDPNQ*GLLIST
Trigger: GGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCAT...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCCGACGTCAGAGACACTaGCTGGAAAGGCGTCCGAGC +
Preference number: 2 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSRRQRH*LERRPS
Trigger: GCTCGGACGCCTTTCCAGCCAGTGTCTCTGACGTCG...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR TCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGACACAGCCCAGAAAACTaGCAACTCCATGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGHSPEN*QLHASL
Trigger: GAGGGAAGCATGGAGTTGTCAGTTTTCTGGGCTGTG...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCCTGCCAGGTGCCCCCTaGCCCTCCCTGACCCCACAA +
Preference number: 2 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSLPGAP*PSLTPQ
Trigger: TTGTGGGGTCAGGGAGGGGCAGGGGGCACCTGGCAG...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGTTCCAATTAGGGCGCTaGCTACCCAGGTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMFQLGR*LPRWEE
Trigger: CTCTTCCCACCTGGGTAGGCAGCGCCCTAATTGGAA...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPCTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGCCACGAAGTCAGACATaGGAAAATGGAGTGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGPRSQT*ENGVCS
Trigger: GGAGCACACTCCATTTTCCCATGTCTGACTTCGTGG...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR TCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGCACAGCCCAGAAAACTaGCAACTCCATGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMHSPEN*QLHASL
Trigger: GAGGGAAGCATGGAGTTGTCAGTTTTCTGGGCTGTG...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFCTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTCCAGGACCAGAGGCATaGGCAGCGGGCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGPGPEA*AAGPGL
Trigger: CAGCCCTGGGCCCGCTGCCCATGCCTCTGGTCCTGG...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCATCACTTCCAGAAGTGTaGGGACGCGACCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPSLPEV*GRDLPA
Trigger: GGCTGGGAGGTCGCGTCCGCACACTTCTGGAAGTGA...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAAAGTTATATACAAAATaGACCCCAACCAGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGKLYTK*TPTSEA
Trigger: GGCCTCACTGGTTGGGGTCCATTTTGTATATAACTT...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACAAGTTATATACAAAATaGACCCCAACCAGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDKLYTK*TPTSEA
Trigger: GGCCTCACTGGTTGGGGTCCATTTTGTATATAACTT...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTAACACCTCTCAGTATTaGGCAGTTTTATCTGAATGG +
Preference number: 2 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGNTSQY*AVLSEW
Trigger: CCATTCAGATAAAACTGCCCAATACTGAGAGGTGTT...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTGAAGGACAGCTGTCCTaGGCCATGGTCAGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIEGQLS*AMVSRA
Trigger: GGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTC...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTAGGAGCTTTGGGAATTaGGACCTGGCCCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGRSFGN*DLAHPH
Trigger: GTGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCT...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR GCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTAAACTGACAACTCCATaGTTCCCTCCCTTACCTTAT +
Preference number: 2 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGKLTTP*FPPLPY
Trigger: ATAAGGTAAGGGAGGGAAGCATGGAGTTGTCAGTTT...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp GGACAGCCCGTACTCAAAGGCTCACTTCCAGAAGTGTaGGGACGCGACCTCCCAGCCACCAGCCCTCCTATG +
Preference number: 3 (lower is better)
Translates to: GQPVLKGSLPEV*GRDLPATSPPM
Trigger: CATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAGTGAGCCTTTGAGTACGGGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp GCTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATaGGGAGTTCCTGCGAGGGAGACGGTCCACGTGGAT +
Preference number: 3 (lower is better)
Translates to: APAETGNAEGQG*GVPARETVHVD
Trigger: ATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp TCCTGCGAGGGAGACGGTCCACGTGGATTGACCGTGTaGTTTCTGAAGGACAGCTGTCCTGCGCCATGGTCA +
Preference number: 3 (lower is better)
Translates to: SCEGDGPRGLTV*FLKDSCPAPWS
Trigger: TGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp AACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTaGGAGGGAGACGGTCCACGTGGATTGACCGTGTGC +
Preference number: 3 (lower is better)
Translates to: NWECRGTRMRSS*EGDGPRGLTVC
Trigger: GCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 72 bp ACCGTGTGCTTTCTGAAGGACAGCTGTCCTGCGCCATaGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCA +
Preference number: 3 (lower is better)
Translates to: TVCFLKDSCPAP*SVGPRAHTTKS
Trigger: TGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTCAGAAAGCACACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 72 bp AAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCACGTaGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCC +
Preference number: 3 (lower is better)
Translates to: KDAEFLRGRRST*IDRVLSEGQLS
Trigger: GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CCA 72 bp CCAGGCTTCCCCATTGATCAAGGCTCCTGCGGAAACTaGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: PGFPIDQGSCGN*ECRGTRMRSSC
Trigger: GCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp TTCCCCATTGATCAAGGCTCCTGCGGAAACTGGGAATaGAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGA +
Preference number: 3 (lower is better)
Translates to: FPIDQGSCGNWE*RGTRMRSSCEG
Trigger: TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp TGGCGAATTTTCTGTTTCCAATTCCAATTAGGGCGCTaGCTACCCAGGTGGGAAGAGGGCTGTTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: WRIFCFQFQLGR*LPRWEEGCWLP
Trigger: GGGCAGCCAACAGCCCTCTTCCCACCTGGGTAGGCAGCGCCCTAATTGGAATTGGAAACAGAAAATTCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CAA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACTGTAAGTGCCAAAGGTaGATGCGTGAAATAATTACC +
Preference number: 3 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDCKCQR*MREIIT
Trigger: GGTAATTATTTCACGCATCAACCTTTGGCACTTACA...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR-3UTR CAA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTACCCAGGCTTCCCCATaGATCAAGGCTCCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYITQASP*IKAPAE
Trigger: TTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGGT...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR TCA 72 bp GTACTAGCTAGAACCTCAGAAAGTGCAAACACACTGTaGCAATACAGTGGAACTATTCCTGCTCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: VLARTSESANTL*QYSGTIPAPPR
Trigger: CCTGGGTGGAGCAGGAATAGTTCCACTGTATTGTCACAGTGTGTTTGCACTTTCTGAGGTTCTAGCTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR GCA 72 bp AAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTaGATTATGGTACAGCTTCATACTCAGAGTTCATCT +
Preference number: 3 (lower is better)
Translates to: KQVCPVTPKLTS*IMVQLHTQSSS
Trigger: AGATGAACTCTGAGTATGAAGCTGTACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTTGCTCCACGCAGATCTaGCCCACGCGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPCSTQI*PTRASR
Trigger: CCTGCTGGCCCGCGTGGGGCAGATCTGCGTGGAGCA...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGGCTCCAGGAACATTCTaGCCGCCGGCTCCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGAPGTF*PPAPRA
Trigger: GGCGCGGGGAGCCGGCGGCCAGAATGTTCCTGGAGC...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374459.5
CDS-3UTR GCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGGCCATCTGGGACCTCTaGGTGGCCCCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWAIWDL*VAPCRA
Trigger: AGCCCTGCAGGGGGCCACGCAGAGGTCCCAGATGGC...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGAAATATGCTGCCAGGTaGCCCCTGCCCCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASKYAAR*PLPLPD
Trigger: GTCAGGGAGGGGCAGGGGGCACCTGGCAGCATATTT...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGCTTGTCTACAGCCGGTaGCCGGAGCTTCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASLVYSR*PELLSQ
Trigger: CTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAG...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCAGGACCAGAGGCATaGGCAGCGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGPGPEA*AAGPGL
Trigger: CAGCCCTGGGCCCGCTGCCCATGCCTCTGGTCCTGG...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCTCCACGCTCCCCCATaGCAGGCTGCACCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGLHAPP*QAAPVR
Trigger: GCGGACAGGTGCAGCCTGGCATGGGGGAGCGTGGAG...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCGCCATCTGGGACCTCTaGGTGGCCCCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSAIWDL*VAPCRA
Trigger: AGCCCTGCAGGGGGCCACGCAGAGGTCCCAGATGGC...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCTGCCAGGTGCCCCCTaGCCCTCCCTGACCCCACAA +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGLPGAP*PSLTPQ
Trigger: TTGTGGGGTCAGGGAGGGGCAGGGGGCACCTGGCAG...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCTGCCAGGTGCCCCCTaGCCCTCCCTGACCCCACAA +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGLPGAP*PSLTPQ
Trigger: TTGTGGGGTCAGGGAGGGGCAGGGGGCACCTGGCAG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGCGCAGTTCCTGGAGCTaGCTCCGGGCAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWRSSWS*LRAAKD
Trigger: GTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCG...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGCTGCTGTTGGCCATCTaGGACCTCTGCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGLLLAI*DLCVAP
Trigger: GGGGGCCACGCAGAGGTCCCAGATGGCCAACAGCAG...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCCCAGGCTTCCCCATTaGTCAAGGCTCCTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPPRLPH*SRLLRK
Trigger: TTTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGG...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCTCCACGCTCCCCCATaGCAGGCTGCACCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRLHAPP*QAAPVR
Trigger: GCGGACAGGTGCAGCCTGGCATGGGGGAGCGTGGAG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCGGCCCGGCTTCCAGCTaGTGCTTCTGCTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGGPASS*CFCSTQ
Trigger: CTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCC...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTGGCCCGGCTTCCAGCTaGTGCTTCTGCTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGGPASS*CFCSTQ
Trigger: CTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCC...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTTTTCACGGCTGCTGTTaGCCATCTGGGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPFHGCC*PSGTSA
Trigger: CGCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAA...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGCTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTGGGCAGGCGCCCAGGTaGAGTGGGACTCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSGQAPR*SGTHRS
Trigger: GCTGCGGTGAGTCCCACTCCACCTGGGCGCCTGCCC...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGTCCATCTTGGAAGATaGGGTCCCCGGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDVHLGR*GPRSRH
Trigger: GTGGCGGCTCCGGGGACCTCATCTTCCAAGATGGAC...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCGGCCTGCCTAGGAGTTaGGGAGCCATCCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRGLPRS*GAILGT
Trigger: GGTCCCCAGGATGGCTCCTCAACTCCTAGGCAGGCC...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCGGCCCGGCTTCCAGCTaGTGCTTCTGCTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRGPASS*CFCSTQ
Trigger: CTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCC...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGTCTGGCGTCGCGGGCTaGATCCGCCTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMSGVAG*IRLRLC
Trigger: ACAGAGCCTGAGGCGGATGCAGCCCGCGACGCCAGA...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTTGCGGAAACTGGGAATaGAGAGGGACAAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPCGNWE*RGTRMR
Trigger: CCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGCCTGTCCGCTACAGCTaGGCCCAAGGATGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWPVRYS*AQGCWR
Trigger: TCTCCAGCATCCTTGGGCCCAGCTGTAGCGGACAGG...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCGCAGTTCCTGGAGCTaGCTCCGGGCAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRRSSWS*LRAAKD
Trigger: GTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGCTTCTGGGCGGCTGGTaGCTTGGTCTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWLLGGW*LGLEDG
Trigger: CCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAG...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGGGCAGGCGCCCAGGTaGAGTGGGACTCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIGQAPR*SGTHRS
Trigger: GCTGCGGTGAGTCCCACTCCACCTGGGCGCCTGCCC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCAGCTGTCCTGCGCCATaGTCAGTAGGGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGSCPAP*SVGPRA
Trigger: AGCCCTGGGCCCTACTGACCATGGCGCAGGACAGCT...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGCCCGTGAAGTGCACGTaGGTGTGTACAGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASPVKCT*VCTETV
Trigger: AACGGTTTCTGTACACACCCACGTGCACTTCACGGG...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGAAGACAACGGACGTCTaGGGCATAGTTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASKTTDV*GIVSSV
Trigger: GACCGAGGAAACTATGCCCCAGACGTCCGTTGTCTT...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395810.6
CDS-3UTR TCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGGAGCCGCACTGACCTaGGAGGTGGGGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIGAALT*EVGCSG
Trigger: CCCAGAGCACCCCACCTCTCAGGTCAGTGCGGCTCC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCGCCATCTGGGACCTCTaGGTGGCCCCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCAIWDL*VAPCRA
Trigger: AGCCCTGCAGGGGGCCACGCAGAGGTCCCAGATGGC...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCGAAGGACAGCTGTCCTaGGCCATGGTCAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGEGQLS*AMVSRA
Trigger: GGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTC...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAAGGATGCGGAGTTCCTaGGAGGGAGACGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGRMRSS*EGDGPR
Trigger: ACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCT...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACCTTGTCTACAGCCGGTaGCCGGAGCTTCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDLVYSR*PELLSQ
Trigger: CTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAG...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTGGCGCCCAGGTGGAGTaGGACTCACCGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSGAQVE*DSPQPK
Trigger: TTTGGGCTGCGGTGAGTCCCACTCCACCTGGGCGCC...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGCGCTGCCTACCCAGGTaGGAAGAGGGCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMRCLPR*EEGCWL
Trigger: CAGCCAACAGCCCTCTTCCCACCTGGGTAGGCAGCG...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGGGCTCCTGCGGAAACTaGGAATGCAGAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGGSCGN*ECRGTR
Trigger: CCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCC...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
3UTR CAA 72 bp ATGCGGAGTTCCTGCGAGGGAGACGGTCCACGTGGATaGACCGTGTGCTTTCTGAAGGACAGCTGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: MRSSCEGDGPRG*TVCFLKDSCPA
Trigger: CGCAGGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCGCAGGAACTCCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGCCAGGGACCCAGAGATaGGGTGTCCATCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGPGTQR*GVHLGR
Trigger: TCTTCCAAGATGGACACCTCATCTCTGGGTCCCTGG...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTATGGACCCCAACCAGTaGGGCCTCCTCATCTCAACC +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGMDPNQ*GLLIST
Trigger: GGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCAT...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGTGTGGAGCCGCACTaGCCTGAGAGGTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIRVEPH*PERWGA
Trigger: AGCACCCCACCTCTCAGGTCAGTGCGGCTCCACACG...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACAGCTGGGCCCAAGGATaGTGGAGAAGACAACGGACG +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDSWAQG*WRRQRT
Trigger: CGTCCGTTGTCTTCTCCAGCATCCTTGGGCCCAGCT...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTTCCCCCATGCCAGGCTaGACCTGTCCGCTACAGCTG +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSSPMPG*TCPLQL
Trigger: CAGCTGTAGCGGACAGGTGCAGCCTGGCATGGGGGA...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGTCCAGCTGCTGCTTCTaGTCCACGCAGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMSSCCF*STQICP
Trigger: GGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGA...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGTTCCAATTAGGGCGCTaGCTACCCAGGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGFQLGR*LPRWEE
Trigger: CTCTTCCCACCTGGGTAGGCAGCGCCCTAATTGGAA...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGTCCTTCTGGGCGGCTaGTGGCTTGGTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDVLLGG*WLGLED
Trigger: ATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGAC...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTTCCCCTCGGCACCTGTaGTTGTCCAAGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGSPRHL*LSKESM
Trigger: CATGGACTCCTTGGACAACCACAGGTGCCGAGGGGA...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCICTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGTCAGAGACACTGGCTaGAAAGGCGTCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMVRDTG*KGVRAG
Trigger: GCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTGAC...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTTGGGCTCCAGCAGTATaGCCTGGCGAATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPWAPAV*PGEFSV
Trigger: AACAGAAAATTCGCCAGGCCATACTGCTGGAGCCCA...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCACCTGGAGACCCACCTaGGGACACGGCCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCTWRPT*GHGPGL
Trigger: TAGCCCTGGGCCGTGTCCCCAGGTGGGTCTCCAGGT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCAGCCAGAGAGGGGCTaGGAAGGCCACGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIQPERG*EGHAFE
Trigger: CTCGAAGGCGTGGCCTTCCCAGCCCCTCTCTGGCTG...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCTGCCACGTGGATGGTaGGTCTTGCCACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRLPRGW*VLPQPK
Trigger: CTTGGGCTGTGGCAAGACCCACCATCCACGTGGCAG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCTCGGTGGCTGCCACGTaGATGGTGGGTCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRSVAAT*MVGLAT
Trigger: TGTGGCAAGACCCACCATCCACGTGGCAGCCACCGA...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGAGCGGCGGCTCCTCTaGCCGCGAGCCAAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAERRLL*PRAKQA
Trigger: TGCTTGCTTGGCTCGCGGGCAGAGGAGCCGCCGCTC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374459.5
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTGGGCTGTACGGTAGTTaGAGAAGTTGCTGGACGGGT +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGGLYGS*RSCWTG
Trigger: ACCCGTCCAGCAACTTCTGCAACTACCGTACAGCCC...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGGCTGTACGGTAGTTaGAGAAGTTGCTGGACGGGT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDGLYGS*RSCWTG
Trigger: ACCCGTCCAGCAACTTCTGCAACTACCGTACAGCCC...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACCGATCTTTTCACGGCTaGTGTTGGCCATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDRSFHG*CWPSGT
Trigger: GGTCCCAGATGGCCAACAGCAGCCGTGAAAAGATCG...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGTTGTCACAGAAAATATaGTGCCAGGTGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGLSQKI*CQVPPA
Trigger: GGCAGGGGGCACCTGGCAGCATATTTTCTGTGACAA...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTGCAGAGGGACAAGGATaGGGAGTTCCTGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSAEGQG*GVPARE
Trigger: CTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGC...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCAGTGGAACTATTCCTaGTCCACCCAGGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGQWNYS*STQDQR
Trigger: CCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCAGTGGAACTATTCCTaGTCCACCCAGGACCAGAGG +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGQWNYS*STQDQR
Trigger: CCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTG...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCACCTGCTTCCTCCTTaGCCCAACAGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIHLLPP*PNSRGR
Trigger: CCTGCCCCTGCTGTTGGGGCAAGGAGGAAGCAGGTG...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTTTCCCGGGCAGGAATaGCGGCCCTGCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAFPGQE*RPCSRP
Trigger: GGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGGAAGGCAGCACAGGTaGCAGCGGCTGAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIGRQHR*QRLRSG
Trigger: ACCTGACCTCAGCCGCTGGCACCTGTGCTGCCTTCC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTTCTCTCGCAGTTCCTaGAGCTGGCTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCFSRSS*SWLRAA
Trigger: GGCTGCCCGGAGCCAGCTCCAGGAACTGCGAGAGAA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGTTTCACGGCTGCTGTTaGCCATCTGGGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMFHGCC*PSGTSA
Trigger: CGCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAA...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCTGTCTTTTTCCATGTaGTTCTCGGGACCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPLSFSM*FSGPSL
Trigger: AAGTGAGGGTCCCGAGAACCACATGGAAAAAGACAG...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCCAGGACCAGAGGCATaGGCAGCGGGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HHPGVGHVFFFITAQCVFPGPEA*AAGPGL
Trigger: CAGCCCTGGGCCCGCTGCCCATGCCTCTGGTCCTGG...AAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCAGAGGTGGGGTGCTCTaGGTTCCTTCTGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRRGGVL*VPSVLP
Trigger: AGGCAGGACAGAAGGAACCCAGAGCACCCCACCTCT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCCACGCCTTCGAGGGTaGGGGCCTGGAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAPRLRG*GPGGGA
Trigger: TGCTCCTCCTCCAGGCCCCCACCCTCGAAGGCGTGG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGGGGACCCAGCCCACTaGTCAGCAGCCAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPGDPAH*SAAREG
Trigger: CCCCTCTCTGGCTGCTGACCAGTGGGCTGGGTCCCC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCCAGCCTCAACCTCCTaGCCCTCAAGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCPASTS*PSREGS
Trigger: GCTGCCTTCCCTTGAGGGCCAGGAGGTTGAGGCTGG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCGAGCCAAGTGGGGACTaGACGATGCAGCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIREPSGD*TMQQLP
Trigger: TGGCAGTTGCTGCATCGTCCAGTCCCCACTTGGCTC...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCCAGGGACCCAGAGATaGGGTGTCCATCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRPGTQR*GVHLGR
Trigger: TCTTCCAAGATGGACACCTCATCTCTGGGTCCCTGG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGCTCAGGAGAAAGGTaGAGATGTACGTCCTATCGG +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGSSGER*RCTSYR
Trigger: CCGATAGGACGTACATCTTCACCTTTCTCCTGAGCT...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACCTGCACGATCTTGGCTaGGAAAGACTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDLHDLG*ERLQLG
Trigger: GCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAG...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTCTGGTGGCTTGGTCTTaGGGATGGGCCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSLVAWS*GWAPCL
Trigger: TAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAG...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCGCATGCTCAGGCAGTTaGACCAGTTGTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGACSGS*TSCHRP
Trigger: AGGCCTATGACAACTGGTTCAACTGCCTGAGCATGC...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCACAGCCCAGAAAACTaGCAACTCCATGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGHSPEN*QLHASL
Trigger: GAGGGAAGCATGGAGTTGTCAGTTTTCTGGGCTGTG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCAGAACTGATCACCCGTaGAGTGCACGTGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSRTDHP*SARGCV
Trigger: TACACACCCACGTGCACTTCACGGGTGATCAGTTCT...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCACTGTCTCAGGCATCTaGGGCCAATGCACTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRTVSGI*GQCTVG
Trigger: TCCCACAGTGCATTGGCCTCAGATGCCTGAGACAGT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCATTACTTCAGTGCCATaGCAGGACCGTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRITSVP*QDRGPL
Trigger: CAGAGGCCCACGGTCCTGTCATGGCACTGAAGTAAT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGCATGGCCCGCTGTaGTGGGGCTCAGGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAQHGPL*WGSGSH
Trigger: GTGAGACCCTGAGCCCCATCACAGCGGGCCATGCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGGCCACTCCACATGGTaGAGGTCTTGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIGHSTW*RSWAKW
Trigger: CCACTTGGCCCAAGACCTTCACCATGTGGAGTGGCC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCCTCCACGCTCCCCCATaGCAGGCTGCACCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSLHAPP*QAAPVR
Trigger: GCGGACAGGTGCAGCCTGGCATGGGGGAGCGTGGAG...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAATGCTCCACGCAGATCTaGCCCACGCGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKCSTQI*PTRASR
Trigger: CCTGCTGGCCCGCGTGGGGCAGATCTGCGTGGAGCA...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTCCAGCTGCTGCTTCTaGTCCACGCAGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSSCCF*STQICP
Trigger: GGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGCGATCTTTTCACGGCTaGTGTTGGCCATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMRSFHG*CWPSGT
Trigger: GGTCCCAGATGGCCAACAGCAGCCGTGAAAAGATCG...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTCTGGCGTCGCGGGCTaGATCCGCCTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPSGVAG*IRLRLC
Trigger: ACAGAGCCTGAGGCGGATGCAGCCCGCGACGCCAGA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCAGGATGCGGAGTTCCTaGGAGGGAGACGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIRMRSS*EGDGPR
Trigger: ACGTGGACCGTCTCCCTCGCAGGAACTCCGCATCCT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGCAGAGGGACAAGGATaGGGAGTTCCTGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIAEGQG*GVPARE
Trigger: CTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGCCAAAACTGACGTCCTaGATTATGGTACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASPKLTS*IMVQLH
Trigger: ATGAAGCTGTACCATAATGCAGGACGTCAGTTTTGG...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTGCAGGTCTGGGGGATaGCCCATGAGCCCCTACCCC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPCRSGG*PMSPYP
Trigger: GGGGTAGGGGCTCATGGGGCATCCCCCAGACCTGCA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCACTGGCCTCTCCCACTaGAGGCTGCTCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCITGLSH*RLLWSG
Trigger: TCCTGACCAGAGCAGCCTGCAGTGGGAGAGGCCAGT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGCCTGTGGCCTTGCCTaGACACAGAGCCAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIACGLA*TQSQPQ
Trigger: TTGAGGCTGGCTCTGTGTGCAGGCAAGGCCACAGGC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCATAGTTTCGGTGGCTaGCACGTGGATGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRHSFGG*HVDGGS
Trigger: AGACCCACCATCCACGTGGCAGCCACCGAAACTATG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTTGGGGCATAGTTTCCTaGGGCTCCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGWGIVS*GSRNIL
Trigger: CAGAATGTTCCTGGAGCCCCAGGAAACTATGCCCCA...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374459.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCCTGTCCGCTACAGCTaGGCCCAAGGATGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCPVRYS*AQGCWR
Trigger: TCTCCAGCATCCTTGGGCCCAGCTGTAGCGGACAGG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGTTCTCCTCATCACACTaGGTGACACGGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGFSSSH*VTRCVM
Trigger: CATCACACACCGTGTCACCCAGTGTGATGAGGAGAA...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCTTGTCTACAGCCGGTaGCCGGAGCTTCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCLVYSR*PELLSQ
Trigger: CTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCTTCTGGGCGGCTGGTaGCTTGGTCTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCILLGGW*LGLEDG
Trigger: CCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAG...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTGTCCTTCTGGGCGGCTaGTGGCTTGGTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSVLLGG*WLGLED
Trigger: ATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGAC...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCTGCTGTTGGCCATCTaGGACCTCTGCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLLLAI*DLCVAP
Trigger: GGGGGCCACGCAGAGGTCCCAGATGGCCAACAGCAG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCTGCCCGTTGGGCAGGTaGTTGGTATGGATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGCPLGR*LVWILC
Trigger: GCACAAAATCCATACCAACCACCTGCCCAACGGGCA...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCCACCAGCCCTCCTATaGAGCCTCGCAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPPPALL*SLAAQA
Trigger: AGCCTGGGCTGCGAGGCTCCATAGGAGGGCTGGTGG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCTCTTCCAGGAGCTTTaGGAATTGGGACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRLFQEL*ELGPGP
Trigger: TGGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACCCCGTGAAGTGCACGTaGGTGTGTACAGAAACCGTT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDPVKCT*VCTETV
Trigger: AACGGTTTCTGTACACACCCACGTGCACTTCACGGG...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTCTGTCCTGCCTACCTaGAGACCCACCTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCISVLPT*RPTWGH
Trigger: GTGTCCCCAGGTGGGTCTCCAGGTAGGCAGGACAGA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCTCACCCCAAGCTCTTaGGGTCATCAGAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRLTPSS*GHQRGH
Trigger: ATGCCCTCTCTGATGACCCCAAGAGCTTGGGGTGAG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCAGGTCTTGGGCCAAGTaGCTGACCAGTATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRRSWAK*LTSMRQ
Trigger: CTGCCTCATACTGGTCAGCCACTTGGCCCAAGACCT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
3UTR CAA 72 bp AGCCTTTCCCAATGTCTTCAGGCTCTTCCAGGAGCTTaGGGAATTGGGACCTGGCCCATCCTCACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLSQCLQALPGA*GIGTWPILTQA
Trigger: AGCCTGGGTGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAGCCTGAAGACATTGGGAAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCAGGGTAAATGCTGCTaGCCCTGTCCAGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRQGKCC*PCPAQC
Trigger: ACATTGAGCTGGACAGGGTCAGCAGCATTTACCCTG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCAGGAGTCCATGTGGCTaGCGATCTGCATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRRSPCG*RSASSP
Trigger: AGGACTTGATGCAGATCGTCAGCCACATGGACTCCT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAGCTGGGCCCAAGGATaGTGGAGAAGACAACGGACG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSWAQG*WRRQRT
Trigger: CGTCCGTTGTCTTCTCCAGCATCCTTGGGCCCAGCT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACTGCTCCACGCAGATCTaGCCCACGCGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHCSTQI*PTRASR
Trigger: CCTGCTGGCCCGCGTGGGGCAGATCTGCGTGGAGCA...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGTGGCCTTCTTCACTGTaGCATTCTCCTCATCACACT +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWWPSSL*HSPHHT
Trigger: AGTGTGATGAGGAGAATGGCACAGTGAAGAAGGCCA...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCGGTAGTTGCAGAAGTTaGTGGACGGGTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSGSCRS*WTGPCD
Trigger: ATCACATGGACCCGTCCAGCAACTTCTGCAACTACC...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGTTGTCACAGAAAATATaGTGCCAGGTGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMLSQKI*CQVPPA
Trigger: GGCAGGGGGCACCTGGCAGCATATTTTCTGTGACAA...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACCGTGGATTGACCGTGTaGTTTCTGAAGGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDRGLTV*FLKDSC
Trigger: ACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACG...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCGTCTCCAGGGCTCAGTaGCAAGTGGAGAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCVSRAQ*QVERQV
Trigger: AACCTGCCTCTCCACTTGGCACTGAGCCCTGGAGAC...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCTCACAAACCCCTTGTTaGCCACAGCTGCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRSQTPC*PQLLST
Trigger: AGTGCTGAGCAGCTGTGGGCAACAAGGGGTTTGTGA...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCATGAGGTGTCCATCTTaGAAGATGAGGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRMRCPS*KMRSPE
Trigger: CTCCGGGGACCTCATCTTCCAAGATGGACACCTCAT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCGGAGCTGCACGATCTTaGCTGAGAAAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSGAARS*LRKTSA
Trigger: AGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCC...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACTTCTCCTCATCACACTaGGTGACACGGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDFSSSH*VTRCVM
Trigger: CATCACACACCGTGTCACCCAGTGTGATGAGGAGAA...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGTGTCATCTGGGCAATaGCCTTCTTCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGVSSGQ*PSSLCH
Trigger: ATGGCACAGTGAAGAAGGCCATTGCCCAGATGACAC...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCCCAGGATGTCCTTCTaGGCGGCTGGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAPRMSF*AAGGLV
Trigger: GACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCTCCAAGGAGTCCATGTaGCTGACGATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGSKESM*LTICIK
Trigger: CTTGATGCAGATCGTCAGCCACATGGACTCCTTGGA...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACAGTTGCAGAAGTTGCTaGACGGGTCCATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDSCRSC*TGPCDA
Trigger: AGCATCACATGGACCCGTCCAGCAACTTCTGCAACT...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCGTTGGGCAGGTGGTTaGTATGGATTTTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGRWAGG*YGFCAG
Trigger: TCCTGCACAAAATCCATACCAACCACCTGCCCAACG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTTGCACGTGCTTCCTCTaGCGTCGCGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: HHPGVGHVFFFITAQCVFCTCFL*RRGLHP
Trigger: CGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCA...AAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCGGCGCCCAGGTGGAGTaGGACTCACCGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSGAQVE*DSPQPK
Trigger: TTTGGGCTGCGGTGAGTCCCACTCCACCTGGGCGCC...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTGGGCTCCAGCAGTATaGCCTGGCGAATTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSWAPAV*PGEFSV
Trigger: AACAGAAAATTCGCCAGGCCATACTGCTGGAGCCCA...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAGAGACACTGGCTGGAAAGGCGTCCGAGCAGGCAGGGCTCACGTTGGTTTTGGGCAGTTTTATCTGAATaGGCTCCAGCAGTATGGCCT +
Preference number: 4 (lower is better)
Translates to: QRHWLERRPSRQGSRWFWAVLSE*APAVWP
Trigger: AGGCCATACTGCTGGAGCCCATTCAGATAAAACTGC...CCAAAACCAACGTGAGCCCTGCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCTGAGGGGGACCGTGTaGAGCCGCACTGACCTGAGA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVALRGTV*SRTDLR
Trigger: TCTCAGGTCAGTGCGGCTCCACACGGTCCCCCTCAG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCTGTCCTCCACAGCATaGCCCGCTGTGATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLSSTA*PAVMGL
Trigger: GAGCCCCATCACAGCGGGCCATGCTGTGGAGGACAG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTGGCTGCCACGTGGATaGTGGGTCTTGCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAWLPRG*WVLPQP
Trigger: GGGCTGTGGCAAGACCCACCATCCACGTGGCAGCCA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGTCCATCTTGGAAGATaGGGTCCCCGGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFVHLGR*GPRSRH
Trigger: GTGGCGGCTCCGGGGACCTCATCTTCCAAGATGGAC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCGTCCATCTTGGAAGATaGGGTCCCCGGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSVHLGR*GPRSRH
Trigger: GTGGCGGCTCCGGGGACCTCATCTTCCAAGATGGAC...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTTGGGCAGTTTTATCTaGATGGGCTCCAGCAGTATG +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSLGSFI*MGSSSM
Trigger: CATACTGCTGGAGCCCATTCAGATAAAACTGCCCAA...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCAGTCACACCAAAACTaGCGTCCTGCATTATGGTAC +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGQSHQN*RPALWY
Trigger: GTACCATAATGCAGGACGTCAGTTTTGGTGTGACTG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGTGGGGGATGCACTCTaGCACCCCACAAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPVGDAL*HPTNSA
Trigger: GGCTGAGTTTGTGGGGTGTCAGAGTGCATCCCCCAC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTACAGGTGCCAGCGGCTaGGGTCAGGTGGAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFTGASG*GQVEKR
Trigger: TCGCTTCTCCACCTGACCTCAGCCGCTGGCACCTGT...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTCCAGCTGCTGCTTCTaGTCCACGCAGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVASSCCF*STQICP
Trigger: GGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGGTAGTTGCAGAAGTTaGTGGACGGGTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMGSCRS*WTGPCD
Trigger: ATCACATGGACCCGTCCAGCAACTTCTGCAACTACC...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCAAGACAACGGACGTCTaGGGCATAGTTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIKTTDV*GIVSWG
Trigger: GCCCCAGGAAACTATGCCCCAGACGTCCGTTGTCTT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374459.5
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTATGAGGTGTCCATCTTaGAAGATGAGGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSMRCPS*KMRSPE
Trigger: CTCCGGGGACCTCATCTTCCAAGATGGACACCTCAT...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCTTCTGGGCGGCTGGTaGCTTGGTCTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLLGGW*LGLEDG
Trigger: CCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCCCAGGATGTCCTTCTaGGCGGCTGGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFPRMSF*AAGGLV
Trigger: GACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCACTGCTGTTGGCCATCTaGGACCTCTGCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPLLLAI*DLCVAP
Trigger: GGGGGCCACGCAGAGGTCCCAGATGGCCAACAGCAG...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGCATGTCATGAACTCATaGATCTGTCTGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LLRKLGMQRDKDAEFLRGHVMNS*ICLEIS
Trigger: GGAGATCTCCAGACAGATCCATGAGTTCATGACATG...CCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCCTGTCTTTTTCCATGTaGTTCTCGGGACCCTCACTT +
Preference number: 4 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSLSFSM*FSGPSL
Trigger: AAGTGAGGGTCCCGAGAACCACATGGAAAAAGACAG...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGTCAGAGACACTGGCTaGAAAGGCGTCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPVRDTG*KGVRAG
Trigger: GCCTGCTCGGACGCCTTTCCAGCCAGTGTCTCTGAC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCGACGTCAGAGACACTaGCTGGAAAGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVARRQRH*LERRPS
Trigger: GCTCGGACGCCTTTCCAGCCAGTGTCTCTGACGTCG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCGCAGTTTTATCTGAATaGGCTCCAGCAGTATGGCCT +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGAVLSE*APAVWP
Trigger: AGGCCATACTGCTGGAGCCCATTCAGATAAAACTGC...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCCACGAAGTCAGACATaGGAAAATGGAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRPRSQT*ENGVCS
Trigger: GGAGCACACTCCATTTTCCCATGTCTGACTTCGTGG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCAGCTGTCCTGCGCCATaGTCAGTAGGGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSSCPAP*SVGPRA
Trigger: AGCCCTGGGCCCTACTGACCATGGCGCAGGACAGCT...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCAGGAGCTTTGGGAATTaGGACCTGGCCCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIRSFGN*DLAHPH
Trigger: GTGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCCCACTCCTTGTTCCTaGGTGCATCTGGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPPTPCS*VHLASP
Trigger: AGGGCTGGCCAGATGCACCCAGGAACAAGGAGTGGG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAGACCCTGCAGGTCTaGGGGATGCCCCATGAGCCC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFKTLQV*GMPHEP
Trigger: GGGCTCATGGGGCATCCCCCAGACCTGCAGGGTCTT...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGTTGAGGAGCCATCCTaGGGACCCAGCCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFVEEPS*GPSPLV
Trigger: GACCAGTGGGCTGGGTCCCCAGGATGGCTCCTCAAC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCGAGGCCAATGCACTGTaGGACAACCTCCCCAAGATC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCEANAL*DNLPKI
Trigger: GATCTTGGGGAGGTTGTCCCACAGTGCATTGGCCTC...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTGTGTATCCTATCGCTaGCCCAGGGTGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCCVSYR*PRVALS
Trigger: ACTGAGTGCCACCCTGGGCCAGCGATAGGATACACA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCACGATGACGCTGGGTaGAATGTCCAGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFHDDAG*NVQAPR
Trigger: CCTGGGGGCCTGGACATTCCACCCAGCGTCATCGTG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCTGGGAGGAGCCAAGTaGGGACTGGACGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVALGGAK*GLDDAA
Trigger: TGCTGCATCGTCCAGTCCCCACTTGGCTCCTCCCAG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGAGTCTGAAGCCCTCTaGGCCTGTTTCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAESEAL*ACFPSA
Trigger: GGCACTGGGGAAACAGGCCCAGAGGGCTTCAGACTC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTAGCTCAGGAGAAAGGTaGAGATGTACGTCCTATCGG +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSSSGER*RCTSYR
Trigger: CCGATAGGACGTACATCTTCACCTTTCTCCTGAGCT...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCAGGAGTCCATGTGGCTaGCGATCTGCATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIRSPCG*RSASSP
Trigger: AGGACTTGATGCAGATCGTCAGCCACATGGACTCCT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCCAAACTTGGCTGTCTTaGCCTTGGACCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGQTWLS*PWTKFS
Trigger: AGAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTG...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCATGGACCCCAACCAGTaGGGCCTCCTCATCTCAACC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPMDPNQ*GLLIST
Trigger: GGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCAT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGAGCTGGGCCCAAGGATaGTGGAGAAGACAACGGACG +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVASWAQG*WRRQRT
Trigger: CGTCCGTTGTCTTCTCCAGCATCCTTGGGCCCAGCT...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTTCACTTCCAGAAGTGTaGGGACGCGACCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFSLPEV*GRDLPA
Trigger: GGCTGGGAGGTCGCGTCCGCACACTTCTGGAAGTGA...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGAAGGACAGCTGTCCTaGGCCATGGTCAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKEGQLS*AMVSRA
Trigger: GGCCCTACTGACCATGGCGCAGGACAGCTGTCCTTC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCAACAAACCAAGACCCTaGAGGTCTGGGGGATGCCCC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPNKPRP*RSGGCP
Trigger: GGGGCATCCCCCAGACCTGCAGGGTCTTGGTTTGTT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGCCTGCAGAGAGACCTaGCTCAGTGCTAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFACRET*LSARRP
Trigger: AGGCCTCCTAGCACTGAGGCAGGTCTCTCTGCAGGC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAGGACCGTGGGCCTCTaGCCTGTAGGGGCCTTACAA +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFRTVGL*PVGALQ
Trigger: TTGTAAGGCCCCTACAGGGCAGAGGCCCACGGTCCT...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGTGGATGGTGGGTCTTaGCACAGCCCAAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPVDGGS*HSPRRA
Trigger: AGCTCTCCTTGGGCTGTGGCAAGACCCACCATCCAC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATGAGGTGTCCATCTTaGAAGATGAGGTCCCCGGAG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCMRCPS*KMRSPE
Trigger: CTCCGGGGACCTCATCTTCCAAGATGGACACCTCAT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTAGAAAGACTTCAGCTTaGCCTTTTCAGGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSRKTSA*PFQARL
Trigger: AAGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCT...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTGGAGCTGCACGATCTTaGCTGAGAAAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSGAARS*LRKTSA
Trigger: AGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCC...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGTCCTTCTGGGCGGCTaGTGGCTTGGTCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPVLLGG*WLGLED
Trigger: ATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGAC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTTTCACGGCTGCTGTTaGCCATCTGGGACCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPFHGCC*PSGTSA
Trigger: CGCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTGCCCGTTGGGCAGGTaGTTGGTATGGATTTTGTGC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCICPLGR*LVWILC
Trigger: GCACAAAATCCATACCAACCACCTGCCCAACGGGCA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCCTGTCTTTTTCCATGTaGTTCTCGGGACCCTCACTT +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRLSFSM*FSGPSL
Trigger: AAGTGAGGGTCCCGAGAACCACATGGAAAAAGACAG...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTTGGGAATTGGGACCTaGCCCATCCTCACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLGIGT*PILTQA
Trigger: AGCCTGGGTGAGGATGGGCCAGGTCCCAATTCCCAA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGGCTCAGTGCCAAGTaGAGAGGCAGGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAGLSAK*RGRFPT
Trigger: TGTAGGGAACCTGCCTCTCCACTTGGCACTGAGCCC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAAGACAACGGACGTCTaGGGCATAGTTTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCKTTDV*GIVSVA
Trigger: AGCCACCGAAACTATGCCCCAGACGTCCGTTGTCTT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAGCTCAGGAGAAAGGTaGAGATGTACGTCCTATCGG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSSGER*RCTSYR
Trigger: CCGATAGGACGTACATCTTCACCTTTCTCCTGAGCT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCTGGTGGCTTGGTCTTaGGGATGGGCCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFLVAWS*GWAPCL
Trigger: TAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCCCGGGCCACATCAATaGAGAACTCCAACATGCGGG +
Preference number: 4 (lower is better)
Translates to: HHPGVGHVFFFITAQCVFPGPHQ*RTPTCG
Trigger: CCCGCATGTTGGAGTTCTTCATTGATGTGGCCCGGG...AAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGGGCCACATCAATaGAGAACTCCAACATGCGGG +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKPGPHQ*RTPTCG
Trigger: CCCGCATGTTGGAGTTCTTCATTGATGTGGCCCGGG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCATGGACCCCAACCAGTaGGGCCTCCTCATCTCAACC +
Preference number: 4 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFMDPNQ*GLLIST
Trigger: GGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCAT...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCTTTAACCTAGACTGTTaGCCCACAAAGCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: NLNPVSARASSGVAGCIRFNLDC*PTKPEV
Trigger: CACTTCTGGCTTTGTGGGTCAACAGTCTAGGTTAAA...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCGGTAGTTGCAGAAGTTaGTGGACGGGTCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCGSCRS*WTGPCD
Trigger: ATCACATGGACCCGTCCAGCAACTTCTGCAACTACC...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGGGCTGTACGGTAGTTaGAGAAGTTGCTGGACGGGT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPGLYGS*RSCWTG
Trigger: ACCCGTCCAGCAACTTCTGCAACTACCGTACAGCCC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCAAAATATGCTGCCAGGTaGCCCCTGCCCCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPKYAAR*PLPLPD
Trigger: GTCAGGGAGGGGCAGGGGGCACCTGGCAGCATATTT...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACAAACTGACAACTCCATaGTTCCCTCCCTTACCTTAT +
Preference number: 4 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDKLTTP*FPPLPY
Trigger: ATAAGGTAAGGGAGGGAAGCATGGAGTTGTCAGTTT...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTGCGGAAACTGGGAATaGAGAGGGACAAGGATGCGG +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVACGNWE*RGTRMR
Trigger: CCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTCCAAAACTGACGTCCTaGATTATGGTACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGPKLTS*IMVQLH
Trigger: ATGAAGCTGTACCATAATGCAGGACGTCAGTTTTGG...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTTCCCAAGGAAGAATTaGACACTGGGCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIFPRKN*TLGSWL
Trigger: GAGCCAAGAGCCCAGTGTGCAATTCTTCCTTGGGAA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCACTCCATGTCCAGCCTaGAGAGAGACCTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPTPCPA*RETCLS
Trigger: ACTGAGGCAGGTCTCTCTGCAGGCTGGACATGGAGT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGTAGTATGTGGGGGATaGACTCTGACACCCCACAAA +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIVVCGG*TLTPHK
Trigger: TTTGTGGGGTGTCAGAGTGCATCCCCCACATACTAC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCGGTAATAGTCCACCGTaGGAACAAGGTGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCGNSPP*EQGAPS
Trigger: TGATGGAGCACCTTGTTCCCACGGTGGACTATTACC...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAGAAAGACTTCAGCTTaGCCTTTTCAGGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCRKTSA*PFQARL
Trigger: AAGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTTCTCCTCATCACACTaGGTGACACGGTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCFSSSH*VTRCVM
Trigger: CATCACACACCGTGTCACCCAGTGTGATGAGGAGAA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGTGTCATCTGGGCAATaGCCTTCTTCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIVSSGQ*PSSLCH
Trigger: ATGGCACAGTGAAGAAGGCCATTGCCCAGATGACAC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTTCCCCTCGGCACCTGTaGTTGTCCAAGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFSPRHL*LSKESM
Trigger: CATGGACTCCTTGGACAACCACAGGTGCCGAGGGGA...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCTCCCCTCGGCACCTGTaGTTGTCCAAGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFSPRHL*LSKESM
Trigger: CATGGACTCCTTGGACAACCACAGGTGCCGAGGGGA...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAGTTGCAGAAGTTGCTaGACGGGTCCATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSCRSC*TGPCDA
Trigger: AGCATCACATGGACCCGTCCAGCAACTTCTGCAACT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTAAGTTATATACAAAATaGACCCCAACCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGKLYTK*TPTSEA
Trigger: GGCCTCACTGGTTGGGGTCCATTTTGTATATAACTT...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCACTGCAGGCTGCTCTaGTCAGGAGGTAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAHCRLL*SGGSMW
Trigger: CCACATACTACCTCCTGACCAGAGCAGCCTGCAGTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCAGGGTAAATGCTGCTaGCCCTGTCCAGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPQGKCC*PCPAQC
Trigger: ACATTGAGCTGGACAGGGTCAGCAGCATTTACCCTG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCACCCGGGCCACATCAATaGAGAACTCCAACATGCGGG +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPPGPHQ*RTPTCG
Trigger: CCCGCATGTTGGAGTTCTTCATTGATGTGGCCCGGG...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTGTAGATGGGCGCCGTaGGCAGGTAACTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVACRWAP*AGNSES
Trigger: AGATTCAGAGTTACCTGCTCACGGCGCCCATCTACA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTTGGGCAGTTTTATCTaGATGGGCTCCAGCAGTATG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCILGSFI*MGSSSM
Trigger: CATACTGCTGGAGCCCATTCAGATAAAACTGCCCAA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTAGTGCAAACACACTGTaGCAATACAGTGGAACTATT +
Preference number: 4 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGSANTL*QYSGTI
Trigger: AATAGTTCCACTGTATTGTCACAGTGTGTTTGCACT...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGCCCAGGAACCACTaGTGTGAGCCAATCCTTCAT +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAQPRNH*CEPILH
Trigger: ATGAAGGATTGGCTCACATCAGTGGTTCCTGGGCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACGATCTTTTCACGGCTaGTGTTGGCCATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKRSFHG*CWPSGT
Trigger: GGTCCCAGATGGCCAACAGCAGCCGTGAAAAGATCG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTTCTGGCGTCGCGGGCTaGATCCGCCTCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYISGVAG*IRLRLC
Trigger: ACAGAGCCTGAGGCGGATGCAGCCCGCGACGCCAGA...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCATTGATCAAGGCTCCTaGGGAAACTGGGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIIDQGS*GNWECR
Trigger: TCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAAT...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCTCAGTGACCATTTGTaGAATGAAGTCACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCLSDHL*NEVTKA
Trigger: CGCCTTCGTGACTTCATTGCACAAATGGTCACTGAG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCGCAGTTCCTGGAGCTaGCTCCGGGCAGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIRSSWS*LRAAKD
Trigger: GTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCCACCAGCCCTCCTATaGAGCCTCGCAGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIPPALL*SLAAQA
Trigger: AGCCTGGGCTGCGAGGCTCCATAGGAGGGCTGGTGG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAAACACCTCTCAGTATTaGGCAGTTTTATCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGNTSQY*AVLSEW
Trigger: CCATTCAGATAAAACTGCCCAATACTGAGAGGTGTT...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGGGAGACGGTCCACGTaGATTGACCGTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKGRRST*IDRVLS
Trigger: AGAAAGCACACGGTCAATCCACGTGGACCGTCTCCC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCATTGGGAATTGGGACCTaGCCCATCCTCACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPLGIGT*PILTQA
Trigger: AGCCTGGGTGAGGATGGGCCAGGTCCCAATTCCCAA...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCCTCTTCCAGGAGCTTTaGGAATTGGGACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSLFQEL*ELGPGP
Trigger: TGGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAG...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGGAAGAATTGCACACTaGGCTCTTGGCTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPGRIAH*ALGSSH
Trigger: GTGACTGGAGCCAAGAGCCCAGTGTGCAATTCTTCC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGGCAGGTTCCCTACATaGCTTTTCCCGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKGRFPT*LFPGRN
Trigger: ATTCCTGCCCGGGAAAAGCCATGTAGGGAACCTGCC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGTAACCTTGGTCAGTTaGGCCTCCTCACCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFVTLVS*ASSPQA
Trigger: AGCTTGGGGTGAGGAGGCCCAACTGACCAAGGTTAC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAAGATCACACAGTTCTaGGTTCAAAAGGCGACCAGC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCKITQF*VQKATS
Trigger: GCTGGTCGCCTTTTGAACCCAGAACTGTGTGATCTT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCTGCACGATCTTGGCTaGGAAAGACTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: HHPGVGHVFFFITAQCVFLHDLG*ERLQLG
Trigger: GCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAG...AAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACTGCACGATCTTGGCTaGGAAAGACTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKLHDLG*ERLQLG
Trigger: GCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGCATGCTCAGGCAGTTaGACCAGTTGTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFACSGS*TSCHRP
Trigger: AGGCCTATGACAACTGGTTCAACTGCCTGAGCATGC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAATGTAGATGGGCGCCGTaGGCAGGTAACTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKCRWAP*AGNSES
Trigger: AGATTCAGAGTTACCTGCTCACGGCGCCCATCTACA...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAGAACTGATCACCCGTaGAGTGCACGTGGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFRTDHP*SARGCV
Trigger: TACACACCCACGTGCACTTCACGGGTGATCAGTTCT...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGCAAACCTGTGTATCTaGACAGCTGTGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFANLCI*TAVSTT
Trigger: GGTGGTGGACACAGCTGTTCAGATACACAGGTTTGC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCACTCCTTCAGGAGCTaGACGATCTTGGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPHSFRS*TILAEK
Trigger: TTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTTCTTAAAGTTAATGTaGCCGTTGGGCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QNLNPVSARASSGVAGCIFLKLM*PLGRWL
Trigger: CAACCACCTGCCCAACGGGCACATTAACTTTAAGAA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGCTTGTTCTTGCACCTaGTTCCTCCTTGCCCCAACA +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKACSCT*FLLAPT
Trigger: TGTTGGGGCAAGGAGGAAGCAGGTGCAAGAACAAGC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGAGGTTCTGCACATaGTCAGAATCCCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAQRFCT*SESLWG
Trigger: TCCCCAAAGGGATTCTGAGCATGTGCAGAACCTCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGAAGCGAGACCCTCCTaGCATTTTGGCCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPEARPS*HFGLSF
Trigger: GAAACTAAGGCCAAAATGGCAGGAGGGTCTCGCTTC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGTAATAGTCCACCGTaGGAACAAGGTGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAGNSPP*EQGAPS
Trigger: TGATGGAGCACCTTGTTCCCACGGTGGACTATTACC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGTGTCATCTGGGCAATaGCCTTCTTCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPVSSGQ*PSSLCH
Trigger: ATGGCACAGTGAAGAAGGCCATTGCCCAGATGACAC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTTTCTCTCGCAGTTCCTaGAGCTGGCTCCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIFSRSS*SWLRAA
Trigger: GGCTGCCCGGAGCCAGCTCCAGGAACTGCGAGAGAA...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCCCAGGATGTCCTTCTaGGCGGCTGGTGGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIPRMSF*AAGGLV
Trigger: GACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCGTTGGGCAGGTGGTTaGTATGGATTTTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPRWAGG*YGFCAG
Trigger: TCCTGCACAAAATCCATACCAACCACCTGCCCAACG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCATGTCATGAACTCATaGATCTGTCTGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCHVMNS*ICLEIS
Trigger: GGAGATCTCCAGACAGATCCATGAGTTCATGACATG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCAAGGAGCTTTGGGAATTaGGACCTGGCCCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPRSFGN*DLAHPH
Trigger: GTGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCT...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTTCAGGAGGTAGTATGTaGGGGATGCACTCTGACACC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFSGGSM*GMHSDT
Trigger: GGTGTCAGAGTGCATCCCCCACATACTACCTCCTGA...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGAAACTGAGGCCCAGTaGGAAGGAACTCAACTAAGG +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAETEAQ*EGTQLR
Trigger: CCTTAGTTGAGTTCCTTCCCACTGGGCCTCAGTTTC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTCAGAAACTCTGGGGTaGACTGCTTCTGTACCCCAA +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPSETLG*TASVPQ
Trigger: TTGGGGTACAGAAGCAGTCCACCCCAGAGTTTCTGA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGAGGACAGGGAGGTCATaGCTCAGACTCATACAATGC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVARTGRS*LRLIQC
Trigger: GCATTGTATGAGTCTGAGCCATGACCTCCCTGTCCT...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACTGTAGATGGGCGCCGTaGGCAGGTAACTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHCRWAP*AGNSES
Trigger: AGATTCAGAGTTACCTGCTCACGGCGCCCATCTACA...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCCACTCCTTCAGGAGCTaGACGATCTTGGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSHSFRS*TILAEK
Trigger: TTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTG...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACACTCCTTCAGGAGCTaGACGATCTTGGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKHSFRS*TILAEK
Trigger: TTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTGGCCTTCTTCACTGTaGCATTCTCCTCATCACACT +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAWPSSL*HSPHHT
Trigger: AGTGTGATGAGGAGAATGGCACAGTGAAGAAGGCCA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCACTTCGACAGGCAGCTaGAAACCTGTGTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPTSTGS*KPVYLN
Trigger: GTTCAGATACACAGGTTTGCAGCTGCCTGTCGAAGT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCACAGAGCAAATTGTTaGCATGATTACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCHRANC*HDYFSA
Trigger: GGCACTGAAGTAATCATGGCAACAATTTGCTCTGTG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGGTAATAGTCCACCGTaGGAACAAGGTGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKGNSPP*EQGAPS
Trigger: TGATGGAGCACCTTGTTCCCACGGTGGACTATTACC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGGAGCTGCACGATCTTaGCTGAGAAAGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFGAARS*LRKTSA
Trigger: AGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAATCCAAGGAGTCCATGTaGCTGACGATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKSKESM*LTICIK
Trigger: CTTGATGCAGATCGTCAGCCACATGGACTCCTTGGA...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCGACGTCAGAGACACTaGCTGGAAAGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIRRQRH*LERRPS
Trigger: GCTCGGACGCCTTTCCAGCCAGTGTCTCTGACGTCG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTCTGGTGGCTTGGTCTTaGGGATGGGCCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGLVAWS*GWAPCL
Trigger: TAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAG...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCAAACTTGGCTGTCTTaGCCTTGGACCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPQTWLS*PWTKFS
Trigger: AGAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTCCCAGGCTTCCCCATTaGTCAAGGCTCCTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGPRLPH*SRLLRK
Trigger: TTTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGG...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCAGTGCAAACACACTGTaGCAATACAGTGGAACTATT +
Preference number: 4 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSANTL*QYSGTI
Trigger: AATAGTTCCACTGTATTGTCACAGTGTGTTTGCACT...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACCGTGGATTGACCGTGTaGTTTCTGAAGGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHRGLTV*FLKDSC
Trigger: ACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACG...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCTCAGACTCATACAATaGTCCCTTCAAACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFLRLIQ*SLQTQA
Trigger: GGCCTGAGTTTGAAGGGAGCATTGTATGAGTCTGAG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCAAGAAAGACTTCAGCTTaGCCTTTTCAGGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPRKTSA*PFQARL
Trigger: AAGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCT...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCATCCAAGGAGTCCATGTaGCTGACGATCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPSKESM*LTICIK
Trigger: CTTGATGCAGATCGTCAGCCACATGGACTCCTTGGA...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGTTGCAGAAGTTGCTaGACGGGTCCATGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHSCRSC*TGPCDA
Trigger: AGCATCACATGGACCCGTCCAGCAACTTCTGCAACT...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTGGCTCCTGCGGAAACTaGGAATGCAGAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIGSCGN*ECRGTR
Trigger: CCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGAGCC...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCACAAAGCCAGAAGTaGCTGTATCATTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKPQSQK*LYHSPV
Trigger: CACAGGTGAATGATACAGCCACTTCTGGCTTTGTGG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACAAACTTGGCTGTCTTaGCCTTGGACCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKQTWLS*PWTKFS
Trigger: AGAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTG...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR TCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCAGGAACCACTGATGTaGGCCAATCCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFQEPLM*ANPSFF
Trigger: GAAAAATGAAGGATTGGCTCACATCAGTGGTTCCTG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCAGCAAATTGTTGCCATaGTTACTTCAGTGCCATGAC +
Preference number: 4 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPSKLLP*LLQCHD
Trigger: GTCATGGCACTGAAGTAATCATGGCAACAATTTGCT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR GCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTTTCCAATTAGGGCGCTaGCTACCCAGGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGFQLGR*LPRWEE
Trigger: CTCTTCCCACCTGGGTAGGCAGCGCCCTAATTGGAA...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTTCCAGCAGTATGGCCTaGCGAATTTTCTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HHPGVGHVFFFITAQCVFSSSMA*RIFCFQ
Trigger: TTGGAAACAGAAAATTCGCCAGGCCATACTGCTGGA...AAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTGGGAGACGGTCCACGTaGATTGACCGTGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGGRRST*IDRVLS
Trigger: AGAAAGCACACGGTCAATCCACGTGGACCGTCTCCC...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTACTGTGACAATACAGTaGAACTATTCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFTVTIQ*NYSCST
Trigger: GGTGGAGCAGGAATAGTTCCACTGTATTGTCACAGT...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTTCTTAGAAAGTCTTTaGCAAGGAGAGCAAGAACGC +
Preference number: 4 (lower is better)
Translates to: HISQNLNPVSARASSGVAFLESL*QGEQER
Trigger: GCGTTCTTGCTCTCCTTGCCAAAGACTTTCTAAGAA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR TCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCAGGGTAAATGCTGCTaGCCCTGTCCAGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIQGKCC*PCPAQC
Trigger: ACATTGAGCTGGACAGGGTCAGCAGCATTTACCCTG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR TCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTGCATGCTCAGGCAGTTaGACCAGTTGTCATAGGCCT +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGACSGS*TSCHRP
Trigger: AGGCCTATGACAACTGGTTCAACTGCCTGAGCATGC...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACCATGTCATGAACTCATaGATCTGTCTGGAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHHVMNS*ICLEIS
Trigger: GGAGATCTCCAGACAGATCCATGAGTTCATGACATG...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAAAGTTATATACAAAATaGACCCCAACCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKKLYTK*TPTSEA
Trigger: GGCCTCACTGGTTGGGGTCCATTTTGTATATAACTT...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCAACTGTGACAATACAGTaGAACTATTCCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPTVTIQ*NYSCST
Trigger: GGTGGAGCAGGAATAGTTCCACTGTATTGTCACAGT...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTCGTTGGGCAGGTGGTTaGTATGGATTTTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIRWAGG*YGFCAG
Trigger: TCCTGCACAAAATCCATACCAACCACCTGCCCAACG...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTGGGTGTAGAAAACACCTCTCAGTATTGGGCAGTTTTATCTGAATGGGCTCCAAAGTTATATACAAAATaGACCCCAACCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGVENTSQYWAVLSEWAPKLYTK*TPTSEA
Trigger: GGCCTCACTGGTTGGGGTCCATTTTGTATATAACTT...TGGAGCCCATTCAGATAAAACTGCCCAATACTGAGAGGTGTTTTCTACACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCAACACCTCTCAGTATTaGGCAGTTTTATCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSNTSQY*AVLSEW
Trigger: CCATTCAGATAAAACTGCCCAATACTGAGAGGTGTT...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTCCACGAAGTCAGACATaGGAAAATGGAGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGPRSQT*ENGVCS
Trigger: GGAGCACACTCCATTTTCCCATGTCTGACTTCGTGG...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTATTGATCAAGGCTCCTaGGGAAACTGGGAATGCAGA +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGIDQGS*GNWECR
Trigger: TCTGCATTCCCAGTTTCCGCAGGAGCCTTGATCAAT...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR GCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTTTCTTAAAGTTAATGTaGCCGTTGGGCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGFLKLM*PLGRWL
Trigger: CAACCACCTGCCCAACGGGCACATTAACTTTAAGAA...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CCA 90 bp TTTATTGAAGCAAGTATGTCCAGTCACACCAAAACTGACGTCCTGCATTATGGTTCCAGCAGTATGGCCTaGCGAATTTTCTGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: FIEASMSSHTKTDVLHYGSSSMA*RIFCFQ
Trigger: TTGGAAACAGAAAATTCGCCAGGCCATACTGCTGGA...ACCATAATGCAGGACGTCAGTTTTGGTGTGACTGGACATACTTGCTTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp TCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTCGTTGAGGATGGGCCCCTaGTCTACAGCCGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SRSVRTRPPSHQPSYGASLRMGP*STAGGR
Trigger: CCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAA...CGAGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS TCA 90 bp AGCACACGCCCAGGATGTCCTTCTGGGCGGCTGGTGGCTTGGTCTTaGGGATGGGCCCCTTGTCTACAGCCGGTGGCCGGAGCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: STRPGCPSGRLVAWS*GWAPCLQPVAGASL
Trigger: GAGAGAAGCTCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGGCGTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS GCA 90 bp AGGCAGGTTCCCTACATGGCTTTTCCCGGGCAGGAATGCCGGCCCTaGAGCAGGCCCACTCCTTGTTCCTGGGTGCATCTGGCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: RQVPYMAFPGQECRP*SRPTPCSWVHLASP
Trigger: AGGGCTGGCCAGATGCACCCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCCATGTAGGGAACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp GAGAAAGACTTCAGCTTGGCCTTTTCAGGCCCGGCTTCCAGCTGCTaGTTCTGCTCCACGCAGATCTGCCCCACGCGGGCCAGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EKDFSLAFSGPASSC*FCSTQICPTRASRS
Trigger: TGACCTGCTGGCCCGCGTGGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS GCA 90 bp CAAGTGGAGAGGCAGGTTCCCTACATGGCTTTTCCCGGGCAGGAATaGCGGCCCTGCAGCAGGCCCACTCCTTGTTCCTGGGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: QVERQVPYMAFPGQE*RPCSRPTPCSWVHL
Trigger: CAGATGCACCCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCCATGTAGGGAACCTGCCTCTCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 90 bp TTGTCTACAGCCGGTGGCCGGAGCTTCTCTCGCAGTTCCTGGAGCTaGCTCCGGGCAGCCAAGGACAGCAACAGGCTCTGTGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LSTAGGRSFSRSSWS*LRAAKDSNRLCVIW
Trigger: CCAGATGACACAGAGCCTGTTGCTGTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CCA 90 bp GGGGTGCTCTGGGTTCCTTCTGTCCTGCCTACCTGGAGACCCACCTaGGGACACGGCCCAGGGCTAGGTCTCCTGCATCCAACAAACCAA +
Preference number: 5 (lower is better)
Translates to: GVLWVPSVLPTWRPT*GHGPGLGLLHPTNQ
Trigger: TTGGTTTGTTGGATGCAGGAGACCTAGCCCTGGGCCGTGTCCCCAGGTGGGTCTCCAGGTAGGCAGGACAGAAGGAACCCAGAGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACTTGAGGATGGGCCCCTaGTCTACAGCCGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDLRMGP*STAGGR
Trigger: CCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAA...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCTGGGCGGCTGGTGGCTaGGTCTTGAGGATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: NLNPVSARASSGVAGCIRWAAGG*VLRMGP
Trigger: GGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCA...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS TCA 90 bp CCTTGTTCCTGGGTGCATCTGGCCAGCCCTCCACCTTCCCAGCTGTaGAATGGTGATGATGACAGCACTTCCACTGCGGGGTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PCSWVHLASPPPSQL*NGDDDSTSTAGSPA
Trigger: GGCAGGGGACCCCGCAGTGGAAGTGCTGTCATCATCACCATTTCACAGCTGGGAAGGTGGAGGGCTGGCCAGATGCACCCAGGAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 90 bp AAGTCTTTGGCAAGGAGAGCAAGAACGCAACCAAAGGCCCCACGATaGCGCTGGGTGGAATGTCCAGGCCCCCAGGCTCAGTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: KSLARRARTQPKAPR*RWVECPGPQAQCCP
Trigger: GGGGCAGCACTGAGCCTGGGGGCCTGGACATTCCACCCAGCGTCATCGTGGGGCCTTTGGTTGCGTTCTTGCTCTCCTTGCCAAAGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp ACCATAGGGCTAACCCCAGCCTGGGACGTTGGTAGGGCTCCATGGTaGTCGCTGCGCCAGGATGCAAGCCAGCTGCTGTTTCAGATCCTC +
Preference number: 5 (lower is better)
Translates to: TIGLTPAWDVGRAPW*SLRQDASQLLFQIL
Trigger: GAGGATCTGAAACAGCAGCTGGCTTGCATCCTGGCGCAGCGAGCACCATGGAGCCCTACCAACGTCCCAGGCTGGGGTTAGCCCTATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472864.1
CDS-3UTR CAA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTGACGGTCCACGTGGATaGACCGTGTGCTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPDGPRG*TVCFLK
Trigger: CTTCAGAAAGCACACGGTCAATCCACGTGGACCGTC...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS GCA 90 bp TTCCTCCTTGCCCCAACAGCAGGGGCAGGCACTTCGACAGGCAGCTaGAAACCTGTGTATCTGAACAGCTGTGTCCACCACCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FLLAPTAGAGTSTGS*KPVYLNSCVHHQAA
Trigger: GGCTGCCTGGTGGTGGACACAGCTGTTCAGATACACAGGTTTGCAGCTGCCTGTCGAAGTGCCTGCCCCTGCTGTTGGGGCAAGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGCTGGTGGCTTGGTCTaGAGGATGGGCCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDAGGLV*RMGPLS
Trigger: AGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGC...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTGGGCGGCTGGTGGCTaGGTCTTGAGGATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QNLNPVSARASSGVAGCIWAAGG*VLRMGP
Trigger: GGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTGGGCGGCTGGTGGCTaGGTCTTGAGGATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SQNLNPVSARASSGVAGCWAAGG*VLRMGP
Trigger: GGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTAAGTTAATGTGCCCGTaGGGCAGGTGGTTGGTATGG +
Preference number: 5 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPKLMCP*GRWLVW
Trigger: CCATACCAACCACCTGCCCAACGGGCACATTAACTT...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp GGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACGGTGCTCTTCCAGGAGCTTaGGGAATTGGGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GNWECRGTRMRSSCEGDGALPGA*GIGTWP
Trigger: GGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAGC...ACCGTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS TCA 90 bp TCACCACCCGGCACACCTCAGTGGCCACCAGCATGCTCAGGCAGTTaGACCAGTTGTCATAGGCCTCCAGGCTGTAGGTCTTGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: SPPGTPQWPPACSGS*TSCHRPPGCRSWSG
Trigger: ACCTGACCAAGACCTACAGCCTGGAGGCCTATGACAACTGGTTCAACTGCCTGAGCATGCTGGTGGCCACTGAGGTGTGCCGGGTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS TCA 90 bp CAGCAGGGGCAGGCACTTCGACAGGCAGCTGCAAACCTGTGTATCTaGACAGCTGTGTCCACCACCAGGCAGCCCCTTCCCAAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: QQGQALRQAAANLCI*TAVSTTRQPLPKEE
Trigger: TTCTTCCTTGGGAAGGGGCTGCCTGGTGGTGGACACAGCTGTTCAGATACACAGGTTTGCAGCTGCCTGTCGAAGTGCCTGCCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp CCATCTGGGACCTCTGCGTGGCCCCCTGCAGGGCTGTACGGTAGTTaGAGAAGTTGCTGGACGGGTCCATGTGATGCTCCAAGACATCAA +
Preference number: 5 (lower is better)
Translates to: PSGTSAWPPAGLYGS*RSCWTGPCDAPRHQ
Trigger: TTGATGTCTTGGAGCATCACATGGACCCGTCCAGCAACTTCTGCAACTACCGTACAGCCCTGCAGGGGGCCACGCAGAGGTCCCAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTTGAGGATGGGCCCCTaGTCTACAGCCGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SQNLNPVSARASSGVAGCLRMGP*STAGGR
Trigger: CCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp TGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGAGACACCCAGGCTTCCCCATaGATCAAGGCTCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: CGNWECRGTRMRSSCEGDTQASP*IKAPAE
Trigger: TTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGGT...GTCTCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS GCA 90 bp ATGAAGTCACGAAGGCGGGCTCACAAACCCCTTGTTGCCCACAGCTaGTCAGCACTGTCTCAGGCATCTGAGGCCAATGCACTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: MKSRRRAHKPLVAHS*SALSQASEANALWD
Trigger: GTCCCACAGTGCATTGGCCTCAGATGCCTGAGACAGTGCTGAGCAGCTGTGGGCAACAAGGGGTTTGTGAGCCCGCCTTCGTGACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp TGCCCCCACTCCAGGACAGGGAGGTCATGGCTCAGACTCATACAATaGTCCCTTCAAACTCAGGCCAGCAGCGGTGCCTCACACAAGTTA +
Preference number: 5 (lower is better)
Translates to: CPHSRTGRSWLRLIQ*SLQTQASSGASHKL
Trigger: TAACTTGTGTGAGGCACCGCTGCTGGCCTGAGTTTGAAGGGAGCATTGTATGAGTCTGAGCCATGACCTCCCTGTCCTGGAGTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp CACAGGTGCCAGCGGCTGAGGTCAGGTGGAGAAGCGAGACCCTCCTaGCATTTTGGCCTTAGTTTCCCCACTGCACAGAGCAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: HRCQRLRSGGEARPS*HFGLSFPTAQSKLL
Trigger: CAACAATTTGCTCTGTGCAGTGGGGAAACTAAGGCCAAAATGGCAGGAGGGTCTCGCTTCTCCACCTGACCTCAGCCGCTGGCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCCTCGGCACCTGTGGTaGTCCAAGGAGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: SQNLNPVSARASSGVAGCPRHLW*SKESMW
Trigger: CCACATGGACTCCTTGGACAACCACAGGTGCCGAGG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp GCCATGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGACGGTCCACGTGGATaGACCGTGTGCTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: AMVSRAQGSHHEVRHGKMDGPRG*TVCFLK
Trigger: CTTCAGAAAGCACACGGTCAATCCACGTGGACCGTC...CATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCGGTAACCTTGGTCAGTaGGGCCTCCTCACCCCAAGC +
Preference number: 5 (lower is better)
Translates to: QNLNPVSARASSGVAGCIGNLGQ*GLLTPS
Trigger: GCTTGGGGTGAGGAGGCCCAACTGACCAAGGTTACC...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp TGGTCAGTAGGGCCCAGGGCTCACACCACGAAGTCAGACATGGGAAAATGGAGTTTGAAGTTCCCGATGTaGAAGCACTCCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: WSVGPRAHTTKSDMGKWSLKFPM*KHSRAT
Trigger: TGTGGCCCGGGAGTGCTTCAACATCGGGAACTTCAA...ACTCCATTTTCCCATGTCTGACTTCGTGGTGTGAGCCCTGGGCCCTACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTTTTCACGGCTGCTGTaGGCCATCTGGGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: QNLNPVSARASSGVAGCIFSRLL*AIWDLC
Trigger: GCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAAA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCCGCAAGTTAATGTGCCCGTaGGGCAGGTGGTTGGTATGG +
Preference number: 5 (lower is better)
Translates to: NLNPVSARASSGVAGCIRKLMCP*GRWLVW
Trigger: CCATACCAACCACCTGCCCAACGGGCACATTAACTT...GCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGCACCTGCTTCCTCCTaGCCCCAACAGCAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFAPASS*PQQQGQ
Trigger: CTGCCCCTGCTGTTGGGGCAAGGAGGAAGCAGGTGC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCCTCACAAACCCCTTGTaGCCCACAGCTGCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SQNLNPVSARASSGVAGCLTNPL*PTAAQH
Trigger: GTGCTGAGCAGCTGTGGGCAACAAGGGGTTTGTGAG...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGCCCAAGGAGAGCTaGCTCAGGCAGGCGGTAGCA +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVAQPKES*LRQAVA
Trigger: TGCTACCGCCTGCCTGAGCAAGCTCTCCTTGGGCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp TCCCTTCAAACTCAGGCCAGCAGCGGTGCCTCACACAAGTTAGAATaGACATTCTCAGGCCTAGCCCCAGACCTGCTGGTCAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: SLQTQASSGASHKLE*TFSGLAPDLLVRNS
Trigger: AGAGTTTCTGACCAGCAGGTCTGGGGCTAGGCCTGAGAATGTGCATTCTAACTTGTGTGAGGCACCGCTGCTGGCCTGAGTTTGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGCTGGTGGCTTGGTCTaGAGGATGGGCCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVAAGGLV*RMGPLS
Trigger: AGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CGAGGGAGACGGTCCACGTGGATTGACCGTGTGCTTTCTGAAGGACAGCTGTCCTTGGCTGTCTTGACCTaGGACCAAGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RGRRSTWIDRVLSEGQLSLAVLT*DQVFFS
Trigger: GCTGAAGAAAACTTGGTCCAAGGTCAAGACAGCCAA...GGACAGCTGTCCTTCAGAAAGCACACGGTCAATCCACGTGGACCGTCTCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCTTGGCTGTCTTGACCTaGGACCAAGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGLAVLT*DQVFFS
Trigger: GCTGAAGAAAACTTGGTCCAAGGTCAAGACAGCCAA...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CTTCCAGAAGTGTGCGGACGCGACCTCCCAGCCACCAGCCCTCCTATGGAGCCTTGTAAGTGCCAAAGGTaGATGCGTGAAATAATTACC +
Preference number: 5 (lower is better)
Translates to: LPEVCGRDLPATSPPMEPCKCQR*MREIIT
Trigger: GGTAATTATTTCACGCATCAACCTTTGGCACTTACA...AGGCTCCATAGGAGGGCTGGTGGCTGGGAGGTCGCGTCCGCACACTTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCCATCAGAGAGGGCATTaGCCGAGCCACTGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPHQRGH*PSHWPL
Trigger: GAGAGGCCAGTGGCTCGGCAAATGCCCTCTCTGATG...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 90 bp CAAAGGAGGCGACGAAGAGAGCTTCCTCGCTGTAGATGGGCGCCGTaGGCAGGTAACTCTGAATCTTCTTGTCCTTCTCGAAAGGACACT +
Preference number: 5 (lower is better)
Translates to: QRRRRRELPRCRWAP*AGNSESSCPSRKDT
Trigger: AGTGTCCTTTCGAGAAGGACAAGAAGATTCAGAGTTACCTGCTCACGGCGCCCATCTACAGCGAGGAAGCTCTCTTCGTCGCCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS TCA 90 bp TGCTTCTGTACCCCAACGCGCTCTCCACTCCAGCCCAGGAACCACTaGTGTGAGCCAATCCTTCATTTTTCAGATGGTGAAACTGAGGCC +
Preference number: 5 (lower is better)
Translates to: CFCTPTRSPLQPRNH*CEPILHFSDGETEA
Trigger: GGCCTCAGTTTCACCATCTGAAAAATGAAGGATTGGCTCACATCAGTGGTTCCTGGGCTGGAGTGGAGAGCGCGTTGGGGTACAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp GCTCAGACTCATACAATGCTCCCTTCAAACTCAGGCCAGCAGCGGTaGCTCACACAAGTTAGAATGCACATTCTCAGGCCTAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: AQTHTMLPSNSGQQR*LTQVRMHILRPSPR
Trigger: TCTGGGGCTAGGCCTGAGAATGTGCATTCTAACTTGTGTGAGGCACCGCTGCTGGCCTGAGTTTGAAGGGAGCATTGTATGAGTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 90 bp CCTGCCATTTTGGCCTTAGTTTCCCCACTGCACAGAGCAAATTGTTaGCATGATTACTTCAGTGCCATGACAGGACCGTGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PAILALVSPLHRANC*HDYFSAMTGPWASA
Trigger: GGCAGAGGCCCACGGTCCTGTCATGGCACTGAAGTAATCATGGCAACAATTTGCTCTGTGCAGTGGGGAAACTAAGGCCAAAATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 90 bp AAGTGGCTGTATCATTCACCTGTGTATCCTATCGCTGGCCCAGGGTaGCACTCAGTGACCATTTGTGCAATGAAGTCACGAAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: KWLYHSPVYPIAGPG*HSVTICAMKSRRRA
Trigger: AGCCCGCCTTCGTGACTTCATTGCACAAATGGTCACTGAGTGCCACCCTGGGCCAGCGATAGGATACACAGGTGAATGATACAGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAGCTGGTGGCTTGGTCTaGAGGATGGGCCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKAGGLV*RMGPLS
Trigger: AGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGC...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCCCTCGGCACCTGTGGTaGTCCAAGGAGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFPRHLW*SKESMW
Trigger: CCACATGGACTCCTTGGACAACCACAGGTGCCGAGG...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATACAGTGGAACTATTCCTGCTCCACCCAGGACCAGAGGCATGGGCAGCGGGCTCAAACTTGGCTGTCTaGACCTTGGACCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: NTVELFLLHPGPEAWAAGSNLAV*TLDQVF
Trigger: GAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTGA...GCCCGCTGCCCATGCCTCTGGTCCTGGGTGGAGCAGGAATAGTTCCACTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTTTTCACGGCTGCTGTaGGCCATCTGGGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPFSRLL*AIWDLC
Trigger: GCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAAA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGGAGCTTTGGGAATaGGGACCTGGCCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVAQELWE*GPGPSS
Trigger: TGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGCAGCAGGTGGTAACCTaGGTCAGTTGGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVAQQVVT*VSWASS
Trigger: TGAGGAGGCCCAACTGACCAAGGTTACCACCTGCTG...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGGGCTCACAAACCCCTaGTTGCCCACAGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFGLTNP*LPTAAQ
Trigger: CTGAGCAGCTGTGGGCAACAAGGGGTTTGTGAGCCC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCGAGAAAGACTTCAGCTaGGCCTTTTCAGGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPEKDFS*AFSGPA
Trigger: AGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCTC...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGAGAAAGACTTCAGCTaGGCCTTTTCAGGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVAEKDFS*AFSGPA
Trigger: AGCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCTC...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACCCTCGGCACCTGTGGTaGTCCAAGGAGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHPRHLW*SKESMW
Trigger: CCACATGGACTCCTTGGACAACCACAGGTGCCGAGG...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCCAGGAGCTTTGGGAATaGGGACCTGGCCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFQELWE*GPGPSS
Trigger: TGAGGATGGGCCAGGTCCCAATTCCCAAAGCTCCTG...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS TCA 90 bp CATTTTGGCCTTAGTTTCCCCACTGCACAGAGCAAATTGTTGCCATaGTTACTTCAGTGCCATGACAGGACCGTGGGCCTCTGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: HFGLSFPTAQSKLLP*LLQCHDRTVGLCPV
Trigger: TACAGGGCAGAGGCCCACGGTCCTGTCATGGCACTGAAGTAATCATGGCAACAATTTGCTCTGTGCAGTGGGGAAACTAAGGCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 90 bp ACAAAGCCAGAAGTGGCTGTATCATTCACCTGTGTATCCTATCGCTaGCCCAGGGTGGCACTCAGTGACCATTTGTGCAATGAAGTCACG +
Preference number: 5 (lower is better)
Translates to: TKPEVAVSFTCVSYR*PRVALSDHLCNEVT
Trigger: CGTGACTTCATTGCACAAATGGTCACTGAGTGCCACCCTGGGCCAGCGATAGGATACACAGGTGAATGATACAGCCACTTCTGGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAATTGAAGTTCCCGATGTaGAAGCACTCCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKLKFPM*KHSRAT
Trigger: TGTGGCCCGGGAGTGCTTCAACATCGGGAACTTCAA...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCTCCTTAACGAAGAGGTaGAACACAGGGATGACGATC +
Preference number: 5 (lower is better)
Translates to: SQNLNPVSARASSGVAGCSLTKR*NTGMTI
Trigger: GATCGTCATCCCTGTGTTCAACCTCTTCGTTAAGGA...GCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCAAGTTAATGTGCCCGTaGGGCAGGTGGTTGGTATGG +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPKLMCP*GRWLVW
Trigger: CCATACCAACCACCTGCCCAACGGGCACATTAACTT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp TCCTGCGGAAACTGGGAATGCAGAGGGACAAGGATGCGGAGTTCCTGCGAGGGATGTAAGTGCCAAAGGTaGATGCGTGAAATAATTACC +
Preference number: 5 (lower is better)
Translates to: SCGNWECRGTRMRSSCEGCKCQR*MREIIT
Trigger: GGTAATTATTTCACGCATCAACCTTTGGCACTTACA...TCCCTCGCAGGAACTCCGCATCCTTGTCCCTCTGCATTCCCAGTTTCCGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACACCCAGGCTTCCCCATaGATCAAGGCTCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHTQASP*IKAPAE
Trigger: TTCCGCAGGAGCCTTGATCAATGGGGAAGCCTGGGT...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTTGCACACTGGGCTCTaGGCTCCAGTCACAGCAATA +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLHTGL*APVTAI
Trigger: TATTGCTGTGACTGGAGCCAAGAGCCCAGTGTGCAA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp GGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAAATGCTCAGAATCCCTTaGGGGAGTCAGCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GPQPVRPPHLNPHQSKFKMLRIP*GSQQSL
Trigger: CAGGCTCTGCTGACTCCCCAAAGGGATTCTGAGCAT...TTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTGACCCTCCTGCCATTTaGGCCTTAGTTTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFDPPAI*ALVSPL
Trigger: CAGTGGGGAAACTAAGGCCAAAATGGCAGGAGGGTC...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp CTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCAGTCACTTGAAGTTCCCGATGTaGAAGCACTCCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LESAMYFSSSQLSVSFSHLKFPM*KHSRAT
Trigger: TGTGGCCCGGGAGTGCTTCAACATCGGGAACTTCAA...GTGACTGAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTGCATCTCAAACTTGGCTGTCTaGACCTTGGACCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: QNLNPVSARASSGVAGCISNLAV*TLDQVF
Trigger: GAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTGA...GATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp AATGGACCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTCTTCCCAAGGAAGAATaGCACACTGGGCTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NGPQPVRPPHLNPHQSKFLPKEE*HTGLLA
Trigger: AGCCAAGAGCCCAGTGTGCAATTCTTCCTTGGGAAG...AAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 90 bp CCCACCAAACACCTAAAGGTTTCCTTGGAATTCTTAGAAAGTCTTTaGCAAGGAGAGCAAGAACGCAACCAAAGGCCCCACGATGACGCT +
Preference number: 5 (lower is better)
Translates to: PTKHLKVSLEFLESL*QGEQERNQRPHDDA
Trigger: AGCGTCATCGTGGGGCCTTTGGTTGCGTTCTTGCTCTCCTTGCCAAAGACTTTCTAAGAATTCCAAGGAAACCTTTAGGTGTTTGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCTTGGCTGTCTTGACCTaGGACCAAGTTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPLAVLT*DQVFFS
Trigger: GCTGAAGAAAACTTGGTCCAAGGTCAAGACAGCCAA...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CACATCAGTCAAAATTTAAACCCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGTCCTTAACGAAGAGGTaGAACACAGGGATGACGATC +
Preference number: 5 (lower is better)
Translates to: HISQNLNPVSARASSGVASLTKR*NTGMTI
Trigger: GATCGTCATCCCTGTGTTCAACCTCTTCGTTAAGGA...CGCGACGCCAGAGGAAGCACGTGCACTAACTGGGTTTAAATTTTGACTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS-3UTR CAA 90 bp GTGCACGTGGGTGTGTACAGAAACCGTTCTAAGGCTGTATTCCAAATATATATTGCTCTTCCAGGAGCTTaGGGAATTGGGACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VHVGVYRNRSKAVFQIYIALPGA*GIGTWP
Trigger: GGGCCAGGTCCCAATTCCCAAAGCTCCTGGAAGAGC...AATATATATTTGGAATACAGCCTTAGAACGGTTTCTGTACACACCCACGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CTTCATCACAGCTCAGTGTGTCTTTCAGTCACAGCCCAGAAAACTGACAACTCCTCCTTAACGAAGAGGTaGAACACAGGGATGACGATC +
Preference number: 5 (lower is better)
Translates to: LHHSSVCLSVTAQKTDNSSLTKR*NTGMTI
Trigger: GATCGTCATCCCTGTGTTCAACCTCTTCGTTAAGGA...GGAGTTGTCAGTTTTCTGGGCTGTGACTGAAAGACACACTGAGCTGTGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp ACCACCCTGGAGTCGGCCATGTATTTTTCTTCATCACAGCTCAGTGTGTCTTTCTCAAACTTGGCTGTCTaGACCTTGGACCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: TTLESAMYFSSSQLSVSFSNLAV*TLDQVF
Trigger: GAAAACTTGGTCCAAGGTCAAGACAGCCAAGTTTGA...GAAAGACACACTGAGCTGTGATGAAGAAAAATACATGGCCGACTCCAGGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374459.5
ENST00000395810.6
CDS-3UTR CAA 90 bp CCCCAACCAGTGAGGCCTCCTCATCTCAACCCACATCAGTCAAAATTTAAACCCATTCTTAGAAAGTCTTaGGCAAGGAGAGCAAGAACG +
Preference number: 5 (lower is better)
Translates to: PQPVRPPHLNPHQSKFKPILRKS*ARRART
Trigger: CGTTCTTGCTCTCCTTGCCAAAGACTTTCTAAGAAT...GGGTTTAAATTTTGACTGATGTGGGTTGAGATGAGGAGGCCTCACTGGTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CCACCGGCCCCGCCTCCACGCTCCCCCATGCCAGGCTaGACCTGTCCGCTACAGCTGGGCCCAAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: PPAPPPRSPMPG*TCPLQLGPRML
Trigger: CAGCATCCTTGGGCCCAGCTGTAGCGGACAGGTGCAGCCTGGCATGGGGGAGCGTGGAGGCGGGGCCGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS CAA 90 bp GGCTTTTCCCGGGCAGGAATGCCGGCCCTGCAGCAGGCCCACTCCTaGTTCCTGGGTGCATCTGGCCAGCCCTCCACCTTCCCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: GFSRAGMPALQQAHS*FLGASGQPSTFPAV
Trigger: CACAGCTGGGAAGGTGGAGGGCTGGCCAGATGCACCCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp TTGGCCTTTTCAGGCCCGGCTTCCAGCTGCTGCTTCTaGTCCACGCAGATCTGCCCCACGCGGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LAFSGPASSCCF*STQICPTRASR
Trigger: CCTGCTGGCCCGCGTGGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCCTGAAAAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CCA 72 bp GCCGGTGGCCGGAGCTTCTCTCGCAGTTCCTGGAGCTaGCTCCGGGCAGCCAAGGACAGCAACAGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: AGGRSFSRSSWS*LRAAKDSNRLC
Trigger: ACAGAGCCTGTTGCTGTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCGAGAGAAGCTCCGGCCACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CCA 72 bp GAATGCCGGCCCTGCAGCAGGCCCACTCCTTGTTCCTaGGTGCATCTGGCCAGCCCTCCACCTTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: ECRPCSRPTPCS*VHLASPPPSQL
Trigger: CAGCTGGGAAGGTGGAGGGCTGGCCAGATGCACCCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp CCCCTGAGCTGCAGATGTCTGAGCAGCTGGGCCTCCTaGAGGCCTCGGTGCCCACACTGGGACTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PLSCRCLSSWAS*RPRCPHWDCPP
Trigger: TGGAGGACAGTCCCAGTGTGGGCACCGAGGCCTCCAGGAGGCCCAGCTGCTCAGACATCTGCAGCTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp GGGCTAACCCCAGCCTGGGACGTTGGTAGGGCTCCATaGTGCTCGCTGCGCCAGGATGCAAGCCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GLTPAWDVGRAP*CSLRQDASQLL
Trigger: CAGCAGCTGGCTTGCATCCTGGCGCAGCGAGCACCATGGAGCCCTACCAACGTCCCAGGCTGGGGTTAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472864.1
CDS CCA 72 bp TCTCTGCCCCACGCCACCATAGGGCTAACCCCAGCCTaGGACGTTGGTAGGGCTCCATGGTGCTCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: SLPHATIGLTPA*DVGRAPWCSLR
Trigger: GCGCAGCGAGCACCATGGAGCCCTACCAACGTCCCAGGCTGGGGTTAGCCCTATGGTGGCGTGGGGCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472864.1
CDS CAA 72 bp CCCAGGATGTCCTTCTGGGCGGCTGGTGGCTTGGTCTaGAGGATGGGCCCCTTGTCTACAGCCGGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: PRMSFWAAGGLV*RMGPLSTAGGR
Trigger: CCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CAA 90 bp TGGCTGCCACGTGGATGGTGGGTCTTGCCACAGCCCAAGGAGAGCTaGCTCAGGCAGGCGGTAGCAGGAGTGGCGAGCAGGGCCACTCCA +
Preference number: 6 (lower is better)
Translates to: WLPRGWWVLPQPKES*LRQAVAGVASRATP
Trigger: TGGAGTGGCCCTGCTCGCCACTCCTGCTACCGCCTGCCTGAGCAAGCTCTCCTTGGGCTGTGGCAAGACCCACCATCCACGTGGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp CCAGGATGTCCTTCTGGGCGGCTGGTGGCTTGGTCTTaGGGATGGGCCCCTTGTCTACAGCCGGTGGCCGGA +
Preference number: 6 (lower is better)
Translates to: PGCPSGRLVAWS*GWAPCLQPVAG
Trigger: TCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS GCA 72 bp GATCCCCCACAGGGCAAGGCCACTCCATGTCCAGCCTaGAGAGAGACCTGCCTCAGTGCTAGGAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: DPPQGKATPCPA*RETCLSARRPA
Trigger: GGCAGGCCTCCTAGCACTGAGGCAGGTCTCTCTGCAGGCTGGACATGGAGTGGCCTTGCCCTGTGGGGGATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp TCTACAGCCGGTGGCCGGAGCTTCTCTCGCAGTTCCTaGAGCTGGCTCCGGGCAGCCAAGGACAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: STAGGRSFSRSS*SWLRAAKDSNR
Trigger: CCTGTTGCTGTCCTTGGCTGCCCGGAGCCAGCTCCAGGAACTGCGAGAGAAGCTCCGGCCACCGGCTGTAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CAA 72 bp TGGGCGGCTGGTGGCTTGGTCTTGAGGATGGGCCCCTaGTCTACAGCCGGTGGCCGGAGCTTCTCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: WAAGGLVLRMGP*STAGGRSFSRS
Trigger: ACTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CAA 72 bp CGTGGATGGTGGGTCTTGCCACAGCCCAAGGAGAGCTaGCTCAGGCAGGCGGTAGCAGGAGTGGCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RGWWVLPQPKES*LRQAVAGVASR
Trigger: CCTGCTCGCCACTCCTGCTACCGCCTGCCTGAGCAAGCTCTCCTTGGGCTGTGGCAAGACCCACCATCCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CAA 90 bp CAGCACACGCCCAGGATGTCCTTCTGGGCGGCTGGTGGCTTGGTCTaGAGGATGGGCCCCTTGTCTACAGCCGGTGGCCGGAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QHTPRMSFWAAGGLV*RMGPLSTAGGRSFS
Trigger: AGAGAAGCTCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGGCGTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS TCA 72 bp TCAGCAGAGCCTGAGGGGGACCGTGTGGAGCCGCACTaGCCTGAGAGGTGGGGTGCTCTGGGTTCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SAEPEGDRVEPH*PERWGALGSFC
Trigger: ACAGAAGGAACCCAGAGCACCCCACCTCTCAGGTCAGTGCGGCTCCACACGGTCCCCCTCAGGCTCTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp TGGCCCTCAAGGGAAGGCAGCACAGGTGCCAGCGGCTaGGGTCAGGTGGAGAAGCGAGACCCTCCTGCCATT +
Preference number: 6 (lower is better)
Translates to: WPSREGSTGASG*GQVEKRDPPAI
Trigger: AATGGCAGGAGGGTCTCGCTTCTCCACCTGACCTCAGCCGCTGGCACCTGTGCTGCCTTCCCTTGAGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp GACTTCAGCTTGGCCTTTTCAGGCCCGGCTTCCAGCTaGTGCTTCTGCTCCACGCAGATCTGCCCCACGCGG +
Preference number: 6 (lower is better)
Translates to: DFSLAFSGPASS*CFCSTQICPTR
Trigger: CCGCGTGGGGCAGATCTGCGTGGAGCAGAAGCAGCAGCTGGAAGCCGGGCCTGAAAAGGCCAAGCTGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS GCA 72 bp CCAGTTAGTGCACGTGCTTCCTCTGGCGTCGCGGGCTaGATCCGCCTCAGGCTCTGTTCAGAAGGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PVSARASSGVAG*IRLRLCSEGWS
Trigger: GGACCACCCTTCTGAACAGAGCCTGAGGCGGATGCAGCCCGCGACGCCAGAGGAAGCACGTGCACTAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS GCA 72 bp CCCTACATGGCTTTTCCCGGGCAGGAATGCCGGCCCTaGAGCAGGCCCACTCCTTGTTCCTGGGTGCATCTG +
Preference number: 6 (lower is better)
Translates to: PYMAFPGQECRP*SRPTPCSWVHL
Trigger: CAGATGCACCCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCCATGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp AGGCAGGTTCCCTACATGGCTTTTCCCGGGCAGGAATaGCGGCCCTGCAGCAGGCCCACTCCTTGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RQVPYMAFPGQE*RPCSRPTPCSW
Trigger: CCAGGAACAAGGAGTGGGCCTGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCCATGTAGGGAACCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CTCCATGGTGCTCGCTGCGCCAGGATGCAAGCCAGCTaGTGTTTCAGATCCTCGTGGGCCGAGCTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LHGARCARMQAS*CFRSSWAELEV
Trigger: GACCTCCAGCTCGGCCCACGAGGATCTGAAACAGCAGCTGGCTTGCATCCTGGCGCAGCGAGCACCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472864.1
CDS CCA 72 bp GCAGCACACGCCCAGGATGTCCTTCTGGGCGGCTGGTaGCTTGGTCTTGAGGATGGGCCCCTTGTCTACAGC +
Preference number: 6 (lower is better)
Translates to: AAHAQDVLLGGW*LGLEDGPLVYS
Trigger: GCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGGCGTGTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CCA 72 bp CTGGGCCCAAGGATGCTGGAGAAGACAACGGACGTCTaGGGCATAGTTTCCTCGGTCCGGGCCAGCGTCGCT +
Preference number: 6 (lower is better)
Translates to: LGPRMLEKTTDV*GIVSSVRASVA
Trigger: AGCGACGCTGGCCCGGACCGAGGAAACTATGCCCCAGACGTCCGTTGTCTTCTCCAGCATCCTTGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395810.6
CDS CCA 72 bp GGGCTCAGTGCCAAGTGGAGAGGCAGGTTCCCTACATaGCTTTTCCCGGGCAGGAATGCCGGCCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: GLSAKWRGRFPT*LFPGRNAGPAA
Trigger: TGCTGCAGGGCCGGCATTCCTGCCCGGGAAAAGCCATGTAGGGAACCTGCCTCTCCACTTGGCACTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp TGGGTTCCTTCTGTCCTGCCTACCTGGAGACCCACCTaGGGACACGGCCCAGGGCTAGGTCTCCTGCATCCA +
Preference number: 6 (lower is better)
Translates to: WVPSVLPTWRPT*GHGPGLGLLHP
Trigger: TGGATGCAGGAGACCTAGCCCTGGGCCGTGTCCCCAGGTGGGTCTCCAGGTAGGCAGGACAGAAGGAACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CAA 72 bp CACACGCCCAGGATGTCCTTCTGGGCGGCTGGTGGCTaGGTCTTGAGGATGGGCCCCTTGTCTACAGCCGGT +
Preference number: 6 (lower is better)
Translates to: HTPRMSFWAAGG*VLRMGPLSTAG
Trigger: ACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACATCCTGGGCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CAA 90 bp ATGTCCTTCTGGGCGGCTGGTGGCTTGGTCTTGAGGATGGGCCCCTaGTCTACAGCCGGTGGCCGGAGCTTCTCTCGCAGTTCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: MSFWAAGGLVLRMGP*STAGGRSFSRSSWS
Trigger: GCTCCAGGAACTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAGCCACCAGCCGCCCAGAAGGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CAA 90 bp GGGTGTCCCAGGCAAGCAGAGGTTCTGCACATGCTCAGAATCCCTTaGGGGAGTCAGCAGAGCCTGAGGGGGACCGTGTGGAGCCGCACT +
Preference number: 6 (lower is better)
Translates to: GCPRQAEVLHMLRIP*GSQQSLRGTVWSRT
Trigger: AGTGCGGCTCCACACGGTCCCCCTCAGGCTCTGCTGACTCCCCAAAGGGATTCTGAGCATGTGCAGAACCTCTGCTTGCCTGGGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp GCAAGGAGAGCAAGAACGCAACCAAAGGCCCCACGATaGCGCTGGGTGGAATGTCCAGGCCCCCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: ARRARTQPKAPR*RWVECPGPQAQ
Trigger: CTGAGCCTGGGGGCCTGGACATTCCACCCAGCGTCATCGTGGGGCCTTTGGTTGCGTTCTTGCTCTCCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp AGAGAGGGCATTTGCCGAGCCACTGGCCTCTCCCACTaGAGGCTGCTCTGGTCAGGAGGTAGTATGTGGGGG +
Preference number: 6 (lower is better)
Translates to: REGICRATGLSH*RLLWSGGSMWG
Trigger: CCCCCACATACTACCTCCTGACCAGAGCAGCCTGCAGTGGGAGAGGCCAGTGGCTCGGCAAATGCCCTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CATAGTTTCGGTGGCTGCCACGTGGATGGTGGGTCTTaGCACAGCCCAAGGAGAGCTTGCTCAGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: HSFGGCHVDGGS*HSPRRACSGRR
Trigger: CCGCCTGCCTGAGCAAGCTCTCCTTGGGCTGTGGCAAGACCCACCATCCACGTGGCAGCCACCGAAACTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CTAACCCCAGCCTGGGACGTTGGTAGGGCTCCATGGTaGTCGCTGCGCCAGGATGCAAGCCAGCTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: LTPAWDVGRAPW*SLRQDASQLLF
Trigger: AAACAGCAGCTGGCTTGCATCCTGGCGCAGCGAGCACCATGGAGCCCTACCAACGTCCCAGGCTGGGGTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472864.1
CDS CCA 72 bp CTTGGTCTTGAGGATGGGCCCCTTGTCTACAGCCGGTaGCCGGAGCTTCTCTCGCAGTTCCTGGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LGLEDGPLVYSR*PELLSQFLELA
Trigger: AGCCAGCTCCAGGAACTGCGAGAGAAGCTCCGGCCACCGGCTGTAGACAAGGGGCCCATCCTCAAGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS CCA 72 bp GCACTTCGAGGAGGGTCTCCAGGGCTCAGTGCCAAGTaGAGAGGCAGGTTCCCTACATGGCTTTTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: ALRGGSPGLSAK*RGRFPTWLFPG
Trigger: GCCCGGGAAAAGCCATGTAGGGAACCTGCCTCTCCACTTGGCACTGAGCCCTGGAGACCCTCCTCGAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp GGTAGCAGGAGTGGCGAGCAGGGCCACTCCACATGGTaGAGGTCTTGGGCCAAGTGGCTGACCAGTATGAGG +
Preference number: 6 (lower is better)
Translates to: GSRSGEQGHSTW*RSWAKWLTSMR
Trigger: CCTCATACTGGTCAGCCACTTGGCCCAAGACCTTCACCATGTGGAGTGGCCCTGCTCGCCACTCCTGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp ACCTCTGCGTGGCCCCCTGCAGGGCTGTACGGTAGTTaGAGAAGTTGCTGGACGGGTCCATGTGATGCTCCA +
Preference number: 6 (lower is better)
Translates to: TSAWPPAGLYGS*RSCWTGPCDAP
Trigger: TGGAGCATCACATGGACCCGTCCAGCAACTTCTGCAACTACCGTACAGCCCTGCAGGGGGCCACGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS CCA 72 bp ACGGACGTCTGGGGCATAGTTTCGGTGGCTGCCACGTaGATGGTGGGTCTTGCCACAGCCCAAGGAGAGCTT +
Preference number: 6 (lower is better)
Translates to: TDVWGIVSVAAT*MVGLATAQGEL
Trigger: AAGCTCTCCTTGGGCTGTGGCAAGACCCACCATCCACGTGGCAGCCACCGAAACTATGCCCCAGACGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CAA 90 bp ACGAAGAGGTTGAACACAGGGATGACGATCTTTTCACGGCTGCTGTaGGCCATCTGGGACCTCTGCGTGGCCCCCTGCAGGGCTGTACGG +
Preference number: 6 (lower is better)
Translates to: TKRLNTGMTIFSRLL*AIWDLCVAPCRAVR
Trigger: CCGTACAGCCCTGCAGGGGGCCACGCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAAAGATCGTCATCCCTGTGTTCAACCTCTTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS TCA 72 bp CTCGGTCCACTCCTTCAGGAGCTGCACGATCTTGGCTaGGAAAGACTTCAGCTTGGCCACCCAGCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: LGPLLQELHDLG*ERLQLGHPARN
Trigger: GTTGCGGGCTGGGTGGCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTGGACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374455.2
CDS TCA 72 bp CAGGCACTTCGACAGGCAGCTGCAAACCTGTGTATCTaGACAGCTGTGTCCACCACCAGGCAGCCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: QALRQAAANLCI*TAVSTTRQPLP
Trigger: GGGAAGGGGCTGCCTGGTGGTGGACACAGCTGTTCAGATACACAGGTTTGCAGCTGCCTGTCGAAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp GCCCCAACAGCAGGGGCAGGCACTTCGACAGGCAGCTaGAAACCTGTGTATCTGAACAGCTGTGTCCACCAC +
Preference number: 6 (lower is better)
Translates to: APTAGAGTSTGS*KPVYLNSCVHH
Trigger: GTGGTGGACACAGCTGTTCAGATACACAGGTTTGCAGCTGCCTGTCGAAGTGCCTGCCCCTGCTGTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CGAAGGCGGGCTCACAAACCCCTTGTTGCCCACAGCTaGTCAGCACTGTCTCAGGCATCTGAGGCCAATGCA +
Preference number: 6 (lower is better)
Translates to: RRRAHKPLVAHS*SALSQASEANA
Trigger: TGCATTGGCCTCAGATGCCTGAGACAGTGCTGAGCAGCTGTGGGCAACAAGGGGTTTGTGAGCCCGCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CAGCGGCTGAGGTCAGGTGGAGAAGCGAGACCCTCCTaGCATTTTGGCCTTAGTTTCCCCACTGCACAGAGC +
Preference number: 6 (lower is better)
Translates to: QRLRSGGEARPS*HFGLSFPTAQS
Trigger: GCTCTGTGCAGTGGGGAAACTAAGGCCAAAATGGCAGGAGGGTCTCGCTTCTCCACCTGACCTCAGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp TCCCACTGCAGGCTGCTCTGGTCAGGAGGTAGTATGTaGGGGATGCACTCTGACACCCCACAAACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: SHCRLLWSGGSM*GMHSDTPQTQP
Trigger: GGGCTGAGTTTGTGGGGTGTCAGAGTGCATCCCCCACATACTACCTCCTGACCAGAGCAGCCTGCAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp AACCTTGGTCAGTTGGGCCTCCTCACCCCAAGCTCTTaGGGTCATCAGAGAGGGCATTTGCCGAGCCACTGG +
Preference number: 6 (lower is better)
Translates to: NLGQLGLLTPSS*GHQRGHLPSHW
Trigger: CCAGTGGCTCGGCAAATGCCCTCTCTGATGACCCCAAGAGCTTGGGGTGAGGAGGCCCAACTGACCAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CAA 72 bp TTGAACACAGGGATGACGATCTTTTCACGGCTGCTGTaGGCCATCTGGGACCTCTGCGTGGCCCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LNTGMTIFSRLL*AIWDLCVAPCR
Trigger: CCTGCAGGGGGCCACGCAGAGGTCCCAGATGGCCAACAGCAGCCGTGAAAAGATCGTCATCCCTGTGTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS CAA 72 bp AAGGCCTCGGTCCACTCCTTCAGGAGCTGCACGATCTaGGCTGAGAAAGACTTCAGCTTGGCCACCCAGCCC +
Preference number: 6 (lower is better)
Translates to: KASVHSFRSCTI*AEKDFSLATQP
Trigger: GGGCTGGGTGGCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTGGACCGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374455.2
CDS CAA 72 bp AGGCAAGCAGAGGTTCTGCACATGCTCAGAATCCCTTaGGGGAGTCAGCAGAGCCTGAGGGGGACCGTGTGG +
Preference number: 6 (lower is better)
Translates to: RQAEVLHMLRIP*GSQQSLRGTVW
Trigger: CCACACGGTCCCCCTCAGGCTCTGCTGACTCCCCAAAGGGATTCTGAGCATGTGCAGAACCTCTGCTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp CTCGGTCCACTCCTTCAGGAGCTGCACGATCTTGGCTaGGAAAGACTTCAGCTTGGCCTTTTCAGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: LGPLLQELHDLG*ERLQLGLFRPG
Trigger: GCCGGGCCTGAAAAGGCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTGGACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS GCA 72 bp ACTCAGGCCAGCAGCGGTGCCTCACACAAGTTAGAATaGACATTCTCAGGCCTAGCCCCAGACCTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: TQASSGASHKLE*TFSGLAPDLLV
Trigger: GACCAGCAGGTCTGGGGCTAGGCCTGAGAATGTGCATTCTAACTTGTGTGAGGCACCGCTGCTGGCCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp CTGGGCCCAAGGATGCTGGAGAAGACAACGGACGTCTaGGGCATAGTTTCCTGGGGCTCCAGGAACATTCTG +
Preference number: 6 (lower is better)
Translates to: LGPRMLEKTTDV*GIVSWGSRNIL
Trigger: CAGAATGTTCCTGGAGCCCCAGGAAACTATGCCCCAGACGTCCGTTGTCTTCTCCAGCATCCTTGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374459.5
CDS CAA 72 bp GTTCTGGGTTCAAAAGGCGACCAGCAGGTGGTAACCTaGGTCAGTTGGGCCTCCTCACCCCAAGCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: VLGSKGDQQVVT*VSWASSPQALG
Trigger: CCCAAGAGCTTGGGGTGAGGAGGCCCAACTGACCAAGGTTACCACCTGCTGGTCGCCTTTTGAACCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp TCCAGGACAGGGAGGTCATGGCTCAGACTCATACAATaGTCCCTTCAAACTCAGGCCAGCAGCGGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: SRTGRSWLRLIQ*SLQTQASSGAS
Trigger: TGAGGCACCGCTGCTGGCCTGAGTTTGAAGGGAGCATTGTATGAGTCTGAGCCATGACCTCCCTGTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp CTCGGCACCTGTGGTTGTCCAAGGAGTCCATGTGGCTaGCGATCTGCATCAAGTCCTCAGGGTAAATGCTGC +
Preference number: 6 (lower is better)
Translates to: LGTCGCPRSPCG*RSASSPQGKCC
Trigger: GCAGCATTTACCCTGAGGACTTGATGCAGATCGTCAGCCACATGGACTCCTTGGACAACCACAGGTGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374455.2
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS CAA 72 bp AAGGCCTCGGTCCACTCCTTCAGGAGCTGCACGATCTaGGCTGAGAAAGACTTCAGCTTGGCCTTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: KASVHSFRSCTI*AEKDFSLAFSG
Trigger: GCCTGAAAAGGCCAAGCTGAAGTCTTTCTCAGCCAAGATCGTGCAGCTCCTGAAGGAGTGGACCGAGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
ENST00000472864.1
CDS TCA 72 bp CGACGAAGAGAGCTTCCTCGCTGTAGATGGGCGCCGTaGGCAGGTAACTCTGAATCTTCTTGTCCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: RRRELPRCRWAP*AGNSESSCPSR
Trigger: TCGAGAAGGACAAGAAGATTCAGAGTTACCTGCTCACGGCGCCCATCTACAGCGAGGAAGCTCTCTTCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6
CDS CCA 72 bp TCAGCACTGTCTCAGGCATCTGAGGCCAATGCACTGTaGGACAACCTCCCCAAGATCACACAGTTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: SALSQASEANAL*DNLPKITQFWV
Trigger: AACCCAGAACTGTGTGATCTTGGGGAGGTTGTCCCACAGTGCATTGGCCTCAGATGCCTGAGACAGTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS TCA 72 bp CTTAGTTTCCCCACTGCACAGAGCAAATTGTTGCCATaGTTACTTCAGTGCCATGACAGGACCGTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: LSFPTAQSKLLP*LLQCHDRTVGL
Trigger: GAGGCCCACGGTCCTGTCATGGCACTGAAGTAATCATGGCAACAATTTGCTCTGTGCAGTGGGGAAACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp CATACAATGCTCCCTTCAAACTCAGGCCAGCAGCGGTaGCTCACACAAGTTAGAATGCACATTCTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: HTMLPSNSGQQR*LTQVRMHILRP
Trigger: AGGCCTGAGAATGTGCATTCTAACTTGTGTGAGGCACCGCTGCTGGCCTGAGTTTGAAGGGAGCATTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS GCA 72 bp TTGGCCTTAGTTTCCCCACTGCACAGAGCAAATTGTTaGCATGATTACTTCAGTGCCATGACAGGACCGTGG +
Preference number: 6 (lower is better)
Translates to: LALVSPLHRANC*HDYFSAMTGPW
Trigger: CCACGGTCCTGTCATGGCACTGAAGTAATCATGGCAACAATTTGCTCTGTGCAGTGGGGAAACTAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CCA 72 bp CACCTAAAGGTTTCCTTGGAATTCTTAGAAAGTCTTTaGCAAGGAGAGCAAGAACGCAACCAAAGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: HLKVSLEFLESL*QGEQERNQRPH
Trigger: GTGGGGCCTTTGGTTGCGTTCTTGCTCTCCTTGCCAAAGACTTTCTAAGAATTCCAAGGAAACCTTTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395809.5
CDS CAA 72 bp GAGATCTCCCAGAATTTCTTAAAGTTAATGTGCCCGTaGGGCAGGTGGTTGGTATGGATTTTGTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: EISQNFLKLMCP*GRWLVWILCRK
Trigger: CTTCCTGCACAAAATCCATACCAACCACCTGCCCAACGGGCACATTAACTTTAAGAAATTCTGGGAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374459.5
ENST00000395809.5
ENST00000395810.6