RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASEF (Homo sapiens)

Ensembl gene IDs: ENSG00000165105

Ensembl transcript IDs: ENST00000340717.4, ENST00000376447.4

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTaGGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: ALPPEVEPTEAGRPP*AVVGSTQFELPGCF
Trigger: AAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 90 bp CACCCAGTTCGAGCTTCCAGGCTGCTTTGTTTACCTAAGCAAGCCTaGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGC +
Preference number: 1 (lower is better)
Translates to: HPVRASRLLCLPKQA*AMAGAPPPASLPPC
Trigger: GCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR TCA 90 bp CAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTaGTCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCG +
Preference number: 1 (lower is better)
Translates to: QWRAPLPQPRCRLAV*SQTAVLAISEIPWA
Trigger: CGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR TCA 90 bp GCCTCCCAGTTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTTaGGGAGGCAGTCTGCCCGTTCTCAGATCTCCATCTGCGTGCTGG +
Preference number: 1 (lower is better)
Translates to: ASQLGCLGVRGQGPT*GGSLPVLRSPSACW
Trigger: CCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAACTGGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp CCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTaGGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCG +
Preference number: 1 (lower is better)
Translates to: PSPLSLTRKGNSLTP*ASQVRQCLALLRLA
Trigger: CGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp GCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTaGAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCC +
Preference number: 1 (lower is better)
Translates to: AWAMAGAPPPASLPP*SLISDCCASNQRDS
Trigger: GGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 90 bp CCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTaGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTGCTTTGTTTACC +
Preference number: 1 (lower is better)
Translates to: PQRWSLQRQAGLLEL*WAPPSSSFQAALFT
Trigger: GGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp GCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTaGTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCT +
Preference number: 1 (lower is better)
Translates to: APPPASLPPCSLISD*CASNQRDSVGVGPS
Trigger: AGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 90 bp AGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTaGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: RLLLSFCLSVPCPQR*SLQRQAGLLELWWA
Trigger: AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp GGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCATCTaGGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGG +
Preference number: 1 (lower is better)
Translates to: GTHLRRQSARSQISI*VLGEPLLSSKLSDR
Trigger: CCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 90 bp GTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTaGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGTTGGGGG +
Preference number: 1 (lower is better)
Translates to: VSFPSNRQDPQLQVC*NTLPCEVSVCPCWG
Trigger: CCCCCAACAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp CCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTaGAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCC +
Preference number: 1 (lower is better)
Translates to: PFWLLVFLLTDRTLS*RSVGIPCRVRCQCA
Trigger: GGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 90 bp AGAGCCAAAGTTCCAGAGGGACCTGAGAGCTGGGTTCAGGTTTCCTaGACTGTAACTCTCCATAGGACAGTGTCAGTAGGATGTGCCACT +
Preference number: 1 (lower is better)
Translates to: RAKVPEGPESWVQVS*TVTLHRTVSVGCAT
Trigger: AGTGGCACATCCTACTGACACTGTCCTATGGAGAGTTACAGTGCAGGAAACCTGAACCCAGCTCTCAGGTCCCTCTGGAACTTTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR TCA 90 bp TACTGCTTCCCACAGAATCTGAGGTGCCAAGGGCTGCAAGGCCTTTaGGGGCAAGCTGCACATTTTACAGATGAAGAAACAGATCCGACA +
Preference number: 1 (lower is better)
Translates to: YCFPQNLRCQGLQGL*GQAAHFTDEETDPT
Trigger: TGTCGGATCTGTTTCTTCATCTGTAAAATGTGCAGCTTGCCCTCAAAGGCCTTGCAGCCCTTGGCACCTCAGATTCTGTGGGAAGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR TCA 90 bp GGTAAATTAGAATCTTTTGTTGTAGCCCACCCTAGGCTCAAGTGTTaGCTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: GKLESFVVAHPRLKC*LLWLLEASQWGGLG
Trigger: TCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTGAGCCTAGGGTGGGCTACAACAAAAGATTCTAATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CCA 90 bp GATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTaGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: DDGDVQMGFRCRCPF*LLVFLLTDRTLSCR
Trigger: CCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 90 bp TATGTTACCAAAATATTTATCAGGGCTCAAATACTTAAAGATGATTaGTTGACCATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTA +
Preference number: 1 (lower is better)
Translates to: YVTKIFIRAQILKDD*LTIKGTGVISSTWL
Trigger: TAGCCACGTTGATGAGATTACACCAGTGCCTTTGATGGTCAACCAATCATCTTTAAGTATTTGAGCCCTGATAAATATTTTGGTAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp CTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTCTTGCGCTTCCCAGGTaGGGCAATGCCTCGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LSKPGQWRAPLPQPRCRLLALPR*GNASPC
Trigger: GCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAG...AAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR TCA 90 bp CTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGGAAAGGGAACTCCCTaGCCCCTTGCGCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LSKPGQWRAPLPQPRCRLGKGTP*PLALPR
Trigger: CCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCC...AAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR GCA 90 bp AAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAACTCCCTGACCCCTTaGGCTTCCCAGGTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: KQAWAMAGAPPPASLPPCNSLTP*ASQVRQ
Trigger: TTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTT...GCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR CCA 90 bp CAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCGGTGCGCGCACACACTaGCCTGCGCCCACTGTCTCG +
Preference number: 2 (lower is better)
Translates to: QRQAGLLELWWAPPSSSFGARTH*PAPTVS
Trigger: CGAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACC...GAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 90 bp TGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTaGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: CPAPRGGAYRGRQAS*SCGGLHPVRASRLL
Trigger: AAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR GCA 90 bp AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCGCACACACTGGCCTaGGCCCACTGTCTCGCACTC +
Preference number: 2 (lower is better)
Translates to: RQAGLLELWWAPPSSSFQAHTLA*AHCLAL
Trigger: GAGTGCGAGACAGTGGGCGCAGGCCAGTGTGTGCGC...CTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 90 bp GCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTaGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: AMAGAPPPASLPPCS*ISDCCASNQRDSVG
Trigger: GCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 90 bp TGCCTCCCAGTTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTaGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCATCTGCGTGCTG +
Preference number: 2 (lower is better)
Translates to: CLPVRLLGGQGSGTH*RRQSARSQISICVL
Trigger: CAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAACTGGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR CCA 90 bp GGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGACCCGGTACCTCAGATaGAAATGCAGAAATCACCCG +
Preference number: 2 (lower is better)
Translates to: GRQASLSCGGLHPVRASRTRYLR*KCRNHP
Trigger: CGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGT...CCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 90 bp AGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTaGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: RQGHLSLQRLLLSFC*SVPCPQRWSLQRQA
Trigger: TGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR CCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGGAGGGACCTGAGAGCTaGGTTCAGGTTTCCTGCACT +
Preference number: 2 (lower is better)
Translates to: QVLTPLALRGISVGRSGKEGPES*VQVSCT
Trigger: AGTGCAGGAAACCTGAACCCAGCTCTCAGGTCCCTC...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR GCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGAGTGTCAGTAGGATGTaGCACTCTGTTAAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: QVLTPLALRGISVGRSGKSVSRM*HSVKSQ
Trigger: TTGGCTCTTAACAGAGTGGCACATCCTACTGACACT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR GCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCCCACAGAATCTGAGGTaGCAAGGGCTGCAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: HQRHWCNLINVAILTGQSPQNLR*QGLQGL
Trigger: AAGGCCTTGCAGCCCTTGGCACCTCAGATTCTGTGG...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 90 bp GATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTaGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: DGDVQMGFRCRCPFW*LVFLLTDRTLSCRS
Trigger: AGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR GCA 90 bp ACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTATACCTCAGATGGAAATaGAGAAATCACCCGTCTTCT +
Preference number: 2 (lower is better)
Translates to: TTALFKAVRQGHLSLQRLYLRWK*RNHPSS
Trigger: AGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA...TAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR CCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGGCTTTCAGTAGTATGTaGCTTTACATGTTTCCATTA +
Preference number: 2 (lower is better)
Translates to: QVLTPLALRGISVGRSGKAFSSM*LYMFPL
Trigger: TAATGGAAACATGTAAAGCCACATACTACTGAAAGC...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTAGTTCCAGAGGGACCTaGGAGCTGGGTTCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLSSRGT*ELGSGF
Trigger: GAAACCTGAACCCAGCTCTCAGGTCCCTCTGGAACT...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACTCAGTGGGGAGGTCTaGGAAGCAATGCAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLLSGEV*EAMQVL
Trigger: CAGAACCTGCATTGCTTCCCAGACCTCCCCACTGAG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTACTTCAGCAAGCTACTTaGGGCCTGGACCTAGATGAA +
Preference number: 2 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLQQAT*GLDLDE
Trigger: TTCATCTAGGTCCAGGCCCCAAGTAGCTTGCTGAAG...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCTATGCTTCTAAACCATaGGAAGGTTTGAAATCAGCA +
Preference number: 2 (lower is better)
Translates to: HQRHWCNLINVAILTGQSYASKP*EGLKSA
Trigger: TGCTGATTTCAAACCTTCCCATGGTTTAGAAGCATA...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTAAGCAATGCAGGTTCTaGAAGGAGAGTAGGCCCAAC +
Preference number: 2 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLKQCRF*KESRPN
Trigger: GTTGGGCCTACTCTCCTTCCAGAACCTGCATTGCTT...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGCCCTTAAGTGAAGAGTaGCAACTTTCCTGGGCATTG +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLPLSEE*QLSWAL
Trigger: CAATGCCCAGGAAAGTTGTCACTCTTCACTTAAGGG...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAAACCACTCCCTTAAGTaGAGAGTGACAACTTTCCTG +
Preference number: 2 (lower is better)
Translates to: VAILTGQSRGKDYENTSVNHSLK*RVTTFL
Trigger: CAGGAAAGTTGTCACTCTTCACTTAAGGGAGTGGTT...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR GCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTGGGTTCAGGTTTCCTaGACTGTAACTCTCCATAGG +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLWVQVS*TVTLHR
Trigger: CCTATGGAGAGTTACAGTGCAGGAAACCTGAACCCA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACACTCTCTGTCCTACTaGTTCCCACAGAATCTGAGG +
Preference number: 2 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLHSLSY*FPQNLR
Trigger: CCTCAGATTCTGTGGGAAGCAGTAGGACAGAGAGTG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTCAGTATTCTGGAAATaGAGACTTCACAGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLSVFWK*RLHRPR
Trigger: CCTTGGCCTGTGAAGTCTTCATTTCCAGAATACTGA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGCCCAAATCACTCACTaGGACAAAACAAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLAQITH*DKTKKS
Trigger: GCTCTTCTTTGTTTTGTCTCAGTGAGTGATTTGGGC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAAGACCTGTAAGGACATaGCTAGTCTATTTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VAILTGQSRGKDYENTSVRPVRT*LVYLAR
Trigger: TCTGGCTAAATAGACTAGTCATGTCCTTACAGGTCT...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGAACCATGGGAAGGTTTaGAATCAGCAGGGATACGAA +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLNHGKV*NQQGYE
Trigger: TTCGTATCCCTGCTGATTTCAAACCTTCCCATGGTT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 90 bp TATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTaGCATTACATTACAGGTTATGCTTCTAAACCATGGGAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: YYLRKLMLATRELGD*HYITGYASKPWEGL
Trigger: CAAACCTTCCCATGGTTTAGAAGCATAACCTGTAATGTAATGCAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTATGCACATTTTACAGATaGAGAAACAGATCCGACATG +
Preference number: 2 (lower is better)
Translates to: VAILTGQSRGKDYENTSVCTFYR*RNRSDM
Trigger: CATGTCGGATCTGTTTCTTCATCTGTAAAATGTGCA...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTTTAAAGATGATTGGTTaGCCATCAAAGGCACTGGTG +
Preference number: 2 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLLKMIG*PSKALV
Trigger: CACCAGTGCCTTTGATGGTCAACCAATCATCTTTAA...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR GCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAGCAAAAGTTTTCCCATaGCACATAAATAATACCCCC +
Preference number: 2 (lower is better)
Translates to: VAILTGQSRGKDYENTSVAKVFP*HINNTP
Trigger: GGGGGTATTATTTATGTGGCATGGGAAAACTTTTGC...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 90 bp GTTACCAAAATATTTATCAGGGCTCAAATACTTAAAGATGATTGGTaGACCATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATAC +
Preference number: 2 (lower is better)
Translates to: VTKIFIRAQILKDDW*TIKGTGVISSTWLY
Trigger: GTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATGGTCAACCAATCATCTTTAAGTATTTGAGCCCTGATAAATATTTTGGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTTTCCTCTACAGCTTTaGTCTGAGCATGTGATTTCT +
Preference number: 2 (lower is better)
Translates to: IDYYLRKLMLATRELGDLFPLQL*SEHVIS
Trigger: AGAAATCACATGCTCAGATCAAAGCTGTAGAGGAAA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CCA 72 bp GCCCTGCTTCGGCTCGCGCACGGTGCGCGCACACACTaGCCTGCGCCCACTGTCTCGCACTCCGTAGTGAGA +
Preference number: 3 (lower is better)
Translates to: ALLRLAHGARTH*PAPTVSHSVVR
Trigger: TCTCACTACGGAGTGCGAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp CGAGCTTCCAGGCTGCTTTGTTTACCTAAGCAAGCCTaGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTG +
Preference number: 3 (lower is better)
Translates to: RASRLLCLPKQA*AMAGAPPPASL
Trigger: CAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp TGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTaGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: WSLQRQAGLLEL*WAPPSSSFQAA
Trigger: AGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp ATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTaGAGTTTGATCTCAGACTGCTGTGCTAGCAATCAG +
Preference number: 3 (lower is better)
Translates to: MAGAPPPASLPP*SLISDCCASNQ
Trigger: CTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp GGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTaGCCGTTCTCAGATCTCCATCTGCGTGCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: GSGVRDPLEEAV*PFSDLHLRAGR
Trigger: TCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp AGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTaGGCTCCACCCAGTTCGAGCTTCCAGGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: SLQRQAGLLELW*APPSSSFQAAL
Trigger: CAAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR-3UTR CAA 90 bp GCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCACCTCCCCCAGCCTCGTaGCCGCCTTGCAGTTTGATC +
Preference number: 3 (lower is better)
Translates to: AVFLFVCALPPEVEPTEAPPPAS*PPCSLI
Trigger: GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGG...TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR TCA 72 bp GCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTaGTCTCAGACTGCTGTGCTAGCAATCAGCGAGATT +
Preference number: 3 (lower is better)
Translates to: APLPQPRCRLAV*SQTAVLAISEI
Trigger: AATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR TCA 72 bp TTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTTaGGGAGGCAGTCTGCCCGTTCTCAGATCTCCATCT +
Preference number: 3 (lower is better)
Translates to: LGCLGVRGQGPT*GGSLPVLRSPS
Trigger: AGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp GCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTaGTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGG +
Preference number: 3 (lower is better)
Translates to: AVVGSTQFELPG*FVYLSKPGQWR
Trigger: CCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp CTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTaGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: LSFCLSVPCPQR*SLQRQAGLLEL
Trigger: CAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp CTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTaGGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: LSLTRKGNSLTP*ASQVRQCLALL
Trigger: AAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp CCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTaGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCC +
Preference number: 3 (lower is better)
Translates to: PSNRQDPQLQVC*NTLPCEVSVCP
Trigger: GGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp GTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VPQMEMQKSPVF*VAHAGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp GGAGGCAGTCTGCCCGTTCTCAGATCTCCATCTGCGTaGTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: GGSLPVLRSPSA*WENHCSLQSCQ
Trigger: CTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp TTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCATCTaGGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: LRRQSARSQISI*VLGEPLLSSKL
Trigger: CAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CCA 72 bp GGCAGTCTGCCCGTTCTCAGATCTCCATCTGCGTGCTaGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: GSLPVLRSPSAC*ENHCSLQSCQT
Trigger: TGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp GTTCCAGAGGGACCTGAGAGCTGGGTTCAGGTTTCCTaGACTGTAACTCTCCATAGGACAGTGTCAGTAGGA +
Preference number: 3 (lower is better)
Translates to: VPEGPESWVQVS*TVTLHRTVSVG
Trigger: TCCTACTGACACTGTCCTATGGAGAGTTACAGTGCAGGAAACCTGAACCCAGCTCTCAGGTCCCTCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CAA 90 bp GGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGGAACTCCCTGACCCCTaGCGCTTCCCAGGTGAGGCA +
Preference number: 3 (lower is better)
Translates to: GFRCRCPFWLLVFLLTDRELPDP*RFPGEA
Trigger: TGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTC...CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR TCA 72 bp CTCCCTTTCTCAGCCCCTGGCAACCACTCCCTTAAGTaGAGAGTGACAACTTTCCTGGGCATTGTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: LPFSAPGNHSLK*RVTTFLGIVLS
Trigger: TGAAAGCACAATGCCCAGGAAAGTTGTCACTCTTCACTTAAGGGAGTGGTTGCCAGGGGCTGAGAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR GCA 72 bp GTTCTCAGATCTCCATCTGCGTGCTGGGAGAACCACTaGTCTCTTCAAAGCTGTCAGACAGGGACACTTAAG +
Preference number: 3 (lower is better)
Translates to: VLRSPSACWENH*SLQSCQTGTLK
Trigger: CTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGATCTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR GCA 72 bp ATTATTAACTGTGGGCCACCACACTCTCTGTCCTACTaGTTCCCACAGAATCTGAGGTGCCAAGGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: IINCGPPHSLSY*FPQNLRCQGLQ
Trigger: TTGCAGCCCTTGGCACCTCAGATTCTGTGGGAAGCAGTAGGACAGAGAGTGTGGTGGCCCACAGTTAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR TCA 72 bp CCACAGAATCTGAGGTGCCAAGGGCTGCAAGGCCTTTaGGGGCAAGCTGCACATTTTACAGATGAAGAAACA +
Preference number: 3 (lower is better)
Translates to: PQNLRCQGLQGL*GQAAHFTDEET
Trigger: TGTTTCTTCATCTGTAAAATGTGCAGCTTGCCCTCAAAGGCCTTGCAGCCCTTGGCACCTCAGATTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CCA 72 bp GCTGCACATTTTACAGATGAAGAAACAGATCCGACATaGGCTTGTGACATGTCCAAGGTCACAAGGCCAGTT +
Preference number: 3 (lower is better)
Translates to: AAHFTDEETDPT*ACDMSKVTRPV
Trigger: AACTGGCCTTGTGACCTTGGACATGTCACAAGCCCATGTCGGATCTGTTTCTTCATCTGTAAAATGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CAA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCAGGGAGTTAGGGGACTaGCATTACATTACAGGTTAT +
Preference number: 3 (lower is better)
Translates to: HQRHWCNLINVAILTGQSRELGD*HYITGY
Trigger: ATAACCTGTAATGTAATGCAAGTCCCCTAACTCCCT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CAA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAAAACCATGGGAAGGTTaGAAATCAGCAGGGATACGA +
Preference number: 3 (lower is better)
Translates to: VAILTGQSRGKDYENTSVKPWEG*KSAGIR
Trigger: TCGTATCCCTGCTGATTTCAAACCTTCCCATGGTTT...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCAAGTGTTGACTCCTTaGGCTCTTAGAGGCATCTCA +
Preference number: 3 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLQVLTP*ALRGIS
Trigger: TGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR TCA 72 bp CCAAGGTCACAAGGCCAGTTAACAGCAAAGCTAGGATaGGAATCCCTTCTTACTAGAACTTTAGTATCAAAT +
Preference number: 3 (lower is better)
Translates to: PRSQGQLTAKLG*ESLLTRTLVSN
Trigger: ATTTGATACTAAAGTTCTAGTAAGAAGGGATTCTCATCCTAGCTTTGCTGTTAACTGGCCTTGTGACCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR GCA 72 bp TCTTTAACCTCAATTTTATCTTCAGCAGGAGGGTTGTaGAACTTGGGTTTATGCAGATCACATCAAGTGTTA +
Preference number: 3 (lower is better)
Translates to: SLTSILSSAGGL*NLGLCRSHQVL
Trigger: TAACACTTGATGTGATCTGCATAAACCCAAGTTGCACAACCCTCCTGCTGAAGATAAAATTGAGGTTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CCA 72 bp AAAATATTTATCAGGGCTCAAATACTTAAAGATGATTaGTTGACCATCAAAGGCACTGGTGTAATCTCATCA +
Preference number: 3 (lower is better)
Translates to: KIFIRAQILKDD*LTIKGTGVISS
Trigger: TGATGAGATTACACCAGTGCCTTTGATGGTCAACCAATCATCTTTAAGTATTTGAGCCCTGATAAATATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp AAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCGAGGAACGTCGGGGGTaGCCGAGCGGCTCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: KQAWAMAGAPPPASLPPCEERRG*PSGSLR
Trigger: TCGAAGGGAGCCGCTCGGCCACCCCCGACGTTCCTC...GCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGAGCGCCTCCTGCGACTaGGCGCCCAAGCGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RQAGLLELWWAPPSSSFQSASCD*APKRRG
Trigger: ACCTCGGCGCTTGGGCGCTCAGTCGCAGGAGGCGCT...CTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGCAGCCGCTGGAATACTaGCTCGGCGTCGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RQAGLLELWWAPPSSSFQQPLEY*LGVGRP
Trigger: CGGCCGGCCGACGCCGAGGCAGTATTCCAGCGGCTG...CTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp GGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGGGTGCGCGCACACACTaGCCTGCGCCCACTGTCTCG +
Preference number: 4 (lower is better)
Translates to: GRQASLSCGGLHPVRASRGARTH*PAPTVS
Trigger: CGAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACC...CCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCAGGCAGGCCTCCTTaGGCTGTGGTGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RQAGLLELWWAPPSSSFQAGRPP*AVVGST
Trigger: GGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGC...CTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp GGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCAGCTCCGTGCACAGTaGCCGGAACTCCTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: GRQASLSCGGLHPVRASRQLRAQ*PELLAL
Trigger: GAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTG...CCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp CTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTTTTGGCTCGTCCGGCTaGTTCGGCCACTTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LSKPGQWRAPLPQPRCRLFGSSG*FGHLRE
Trigger: TTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAA...AAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp CAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCTCGGCGTCCAGCCGCTaGAATACTGCCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: QRQAGLLELWWAPPSSSFSASSR*NTASAS
Trigger: CGACGCCGAGGCAGTATTCCAGCGGCTGGACGCCGA...GAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 72 bp CCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTaGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRGGAYRGRQAS*SCGGLHPVRAS
Trigger: GGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp GCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGCAGGCGGCGAAGACTaGGCGCAGCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AVFLFVCALPPEVEPTEAAGGED*AQPGQL
Trigger: GAGCTGGCCCGGCTGCGCTCAGTCTTCGCCGCCTGC...TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp TTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGGAAAGGGAACTCCCTaGCCCCTTGCGCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSVPCPQRWSLQRQAGLLGKGTP*PLALPR
Trigger: CCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCC...AAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp CCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTAACTCCCTGACCCCTTaGGCTTCCCAGGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PQRWSLQRQAGLLELWWANSLTP*ASQVRQ
Trigger: TTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTT...AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp GCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGCACCCGCAGCTCCGTaGACAGTGCCCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: AVFLFVCALPPEVEPTEAAPAAP*TVPGTP
Trigger: AGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGC...TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp GTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGGAGGCCCGGCGAGTTTaGCTCGTCCGGCTGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VPQMEMQKSPVFCVAHAGEARRV*LVRLVR
Trigger: CCGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTC...CCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGCCTATTCGGCCATCTTaGCTCCTCCCTCCTCGATTG +
Preference number: 4 (lower is better)
Translates to: RQAGLLELWWAPPSSSFQPIRPS*LLPPRL
Trigger: CAATCGAGGAGGGAGGAGCCAAGATGGCCGAATAGG...CTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 72 bp GGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTaGATCTCAGACTGCTGTGCTAGCAATCAGCGAGAT +
Preference number: 4 (lower is better)
Translates to: GAPPPASLPPCS*ISDCCASNQRD
Trigger: ATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 72 bp GTTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTaGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCATC +
Preference number: 4 (lower is better)
Translates to: VRLLGGQGSGTH*RRQSARSQISI
Trigger: GATGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp GTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGGCGCACACACTGGCCTaGGCCCACTGTCTCGCACTC +
Preference number: 4 (lower is better)
Translates to: VPQMEMQKSPVFCVAHAGAHTLA*AHCLAL
Trigger: GAGTGCGAGACAGTGGGCGCAGGCCAGTGTGTGCGC...CCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp GCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCATCCCCAAGTCGCGCCTaGAAATCCTGCCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AVFLFVCALPPEVEPTEASPSRA*KSCQAR
Trigger: CCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGA...TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
3UTR CAA 72 bp CCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTaGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PFFDSERELPDP*RFPGEAMPRPA
Trigger: AGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp GAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGCTGGTTCGGCCACTTaGGGGAACGTCGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ENHCSLQSCQTGTLKSAEAGSAT*GNVGRG
Trigger: GCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGC...CTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGCGAACTCCTGGAAGGTaGTGGCGCCGTCACGGTCGG +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKRTPGR*WRRHGR
Trigger: CCGACCGTGACGGCGCCATCACCTTCCAGGAGTTCG...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGACCACGCGCGAACTCCTaGAAGGTGATGGCGCCGTCA +
Preference number: 4 (lower is better)
Translates to: YCCLFVCLCPAPRGGAYRPRANS*KVMAPS
Trigger: TGACGGCGCCATCACCTTCCAGGAGTTCGCGCGTGG...TCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp ACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACGCGCCTGGAAATCCTaGCAAGCCCGGCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: TTALFKAVRQGHLSLQRLRAWKS*QARPGL
Trigger: GAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCG...TAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp AACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTCGAACTCCTGGAAGGTaGTGGCGCCGTCACGGTCGG +
Preference number: 4 (lower is better)
Translates to: NHCSLQSCQTGTLKSAEVRTPGR*WRRHGR
Trigger: CCGACCGTGACGGCGCCATCACCTTCCAGGAGTTCG...AACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp AACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTCTTGCGCTTCCCAGGTaGGGCAATGCCTCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NHCSLQSCQTGTLKSAEVLALPR*GNASPC
Trigger: GCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAG...AACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR GCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCCAGCTCCGTGCACAGTaGCCGGAACTCCTCGCGCTC +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSQLRAQ*PELLAL
Trigger: GAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTG...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGCTTCTGAATCTCTCCTaGCCAGCTGTATCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKLLNLS*PAVSQS
Trigger: GCTCTGGGATACAGCTGGTCAGGAGAGATTCAGAAG...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCTCCCCAAGTCGCGCCTaGAAATCCTGCCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSSPSRA*KSCQAR
Trigger: CCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGA...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 72 bp CACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTaGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: HLSLQRLLLSFC*SVPCPQRWSLQ
Trigger: CTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAGCTGGTTCGGCCACTTaGGGGAACGTCGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVAGSAT*GNVGRG
Trigger: GCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGC...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGCAGGCGGCGAAGACTaGGCGCAGCCGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLAGGED*AQPGQL
Trigger: GAGCTGGCCCGGCTGCGCTCAGTCTTCGCCGCCTGC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGACTCAACTGCATAGCTaGCTTGTCCTGGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKTQLHS*LVLGSL
Trigger: AAGAGAGCCCAGGACAAGGCAGCTATGCAGTTGAGT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGACTTCTCGAGCAAGGTaGAGAACAGCCTCCACTATG +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKTSRAR*RTASTM
Trigger: CATAGTGGAGGCTGTTCTGCACCTTGCTCGAGAAGT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGTTAGAGGCATCTCAGTaGGGAGGTCTGGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKLEASQ*GGLGSN
Trigger: ATTGCTTCCCAGACCTCCCCACTGAGATGCCTCTAA...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGTGGGTTCAGGTTTCCTaGACTGTAACTCTCCATAGG +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKWVQVS*TVTLHR
Trigger: CCTATGGAGAGTTACAGTGCAGGAAACCTGAACCCA...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGAGCCAAATCTGGGAATaGACTTGGCTTCGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ENHCSLQSCQTGTLKSAESQIWE*TWLRPQ
Trigger: TTGGGGACGAAGCCAAGTTCATTCCCAGATTTGGCT...CTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp TACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAATGCACACAGTGTTATaGGATGCCTCACGAACACAA +
Preference number: 4 (lower is better)
Translates to: YCCLFVCLCPAPRGGAYRMHTVL*DASRTQ
Trigger: TTGTGTTCGTGAGGCATCTCATAACACTGTGTGCAT...TCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGAACCACTCCCTTAAGTaGAGAGTGACAACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKNHSLK*RVTTFL
Trigger: CAGGAAAGTTGTCACTCTTCACTTAAGGGAGTGGTT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAGCACCCGCAGCTCCGTaGACAGTGCCCGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVAPAAP*TVPGTP
Trigger: AGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGC...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGAGGAACGTCGGGGGTaGCCGAGCGGCTCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLEERRG*PSGSLR
Trigger: TCGAAGGGAGCCGCTCGGCCACCCCCGACGTTCCTC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCCTCAGTGGGGAGGTCTaGGAAGCAATGCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSLSGEV*EAMQVL
Trigger: CAGAACCTGCATTGCTTCCCAGACCTCCCCACTGAG...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGAGACCTGTAAGGACATaGCTAGTCTATTTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKRPVRT*LVYLAR
Trigger: TCTGGCTAAATAGACTAGTCATGTCCTTACAGGTCT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGCACAAAAACCATCACTaGAGCCGATCACTGTACAAA +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKHKNHH*SRSLYK
Trigger: TTTGTACAGTGATCGGCTTCAGTGATGGTTTTTGTG...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACGCGCCTGGAAATCCTaGCAAGCCCGGCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLRAWKS*QARPGL
Trigger: GAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTCGGCGTCCAGCCGCTaGAATACTGCCTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLSASSR*NTASAS
Trigger: CGACGCCGAGGCAGTATTCCAGCGGCTGGACGCCGA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp GGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGCACAGTGTTATGAGATaGCTCACGAACACAAATGCA +
Preference number: 4 (lower is better)
Translates to: GRTTALFKAVRQGHLSLQHSVMR*LTNTNA
Trigger: TGCATTTGTGTTCGTGAGGCATCTCATAACACTGTG...CTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCAAGCAATGCAGGTTCTaGAAGGAGAGTAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSKQCRF*KESRPN
Trigger: GTTGGGCCTACTCTCCTTCCAGAACCTGCATTGCTT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp TACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGACACAAATGCAGGTTTTaGAATTGTGTAGCCAAATCT +
Preference number: 4 (lower is better)
Translates to: YCCLFVCLCPAPRGGAYRHKCRF*NCVAKS
Trigger: AGATTTGGCTACACAATTTCAAAACCTGCATTTGTG...TCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGCTCCTGCACCCCGTGTaGCCTCTGAAATCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLLLHPV*PLKSPL
Trigger: CAGAGGGGATTTCAGAGGTCACACGGGGTGCAGGAG...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGTTTTTAATGGTCACCTaGAGATCTCCTACTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKFLMVT*RSPTSV
Trigger: AACTGAAGTAGGAGATCTGCAGGTGACCATTAAAAA...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACCACGCGCGAACTCCTaGAAGGTGATGGCGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLPRANS*KVMAPS
Trigger: TGACGGCGCCATCACCTTCCAGGAGTTCGCGCGTGG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp GGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGTCTCCATCTGCGTGCTaGGAGAACCACTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GFRCRCPFWLLVFLLTDRSPSAC*ENHCSL
Trigger: AAGAGAGCAGTGGTTCTCCCAGCACGCAGATGGAGA...CCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGACAAGGTTGATGTTTTaGTACAAGGTACTAACTTGC +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKTRLMF*YKVLTC
Trigger: GCAAGTTAGTACCTTGTACCAAAACATCAACCTTGT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCATGCCCCATACGTCATaGCCAGTTTCTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSMPHTS*PVSLQS
Trigger: ACTTTGGAGAGAAACTGGCCATGACGTATGGGGCAT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGTATGCTTCTAAACCATaGGAAGGTTTGAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: QVLTPLALRGISVGRSGKYASKP*EGLKSA
Trigger: TGCTGATTTCAAACCTTCCCATGGTTTAGAAGCATA...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAAGTTCCAGAGGGACCTaGGAGCTGGGTTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVSSRGT*ELGSGF
Trigger: GAAACCTGAACCCAGCTCTCAGGTCCCTCTGGAACT...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCCAGGCCAAGGATGTTTaGGATTTAGCCATTGCAACA +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSQAKDV*DLAIAT
Trigger: TGTTGCAATGGCTAAATCCCAAACATCCTTGGCCTG...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTATTCCTTTTTAGCCCATaGCAATGCACACAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: TTALFKAVRQGHLSLQRLFLFSP*QCTQCY
Trigger: ATAACACTGTGTGCATTGTCATGGGCTAAAAAGGAA...TAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR TCA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCATTCTTCATCTGTGGTaGCTTTTTGGAATTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HQRHWCNLINVAILTGQSILHLW*LFGIGP
Trigger: GGGACCAATTCCAAAAAGTCACCACAGATGAAGAAT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCCACAGAATCTGAGGTaGCAAGGGCTGCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLPQNLR*QGLQGL
Trigger: AAGGCCTTGCAGCCCTTGGCACCTCAGATTCTGTGG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATTTGGCTCGTCCGGCTaGTTCGGCCACTTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLFGSSG*FGHLRE
Trigger: TTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp GGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGTGTAGATGTCCTTTCTaGTTGTTAGTTTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GRTTALFKAVRQGHLSLQCRCPF*LLVFLL
Trigger: TAGAAGGAAAACTAACAACCAGAAAGGACATCTACA...CTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGAGGGACCTGAGAGCTaGGTTCAGGTTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLEGPES*VQVSCT
Trigger: AGTGCAGGAAACCTGAACCCAGCTCTCAGGTCCCTC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGCTCTTCTCTGGGAATaGACTTGGCTTCGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLALLWE*TWLRPQ
Trigger: TTGGGGACGAAGCCAAGTTCATTCCCAGAGAAGAGC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAACTAGACTTCCCCACTaGAGCGTCCCCAGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLTRLPH*SVPSKY
Trigger: GTACTTGCTGGGGACGCTGCAGTGGGGAAGTCTAGT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGATAGCTGCCTTGTCCTaGGCTCTCTTCACCGCAATG +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLIAALS*ALFTAM
Trigger: CATTGCGGTGAAGAGAGCCCAGGACAAGGCAGCTAT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATCTACCAGGTCTGTCTaGGGCGAGAGTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLSTRSV*GESAEM
Trigger: CATCTCAGCACTCTCGCCCCAGACAGACCTGGTAGA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAACTTCAGTTTCATACTaGCGTCTGAGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVTSVSY*RLRSLR
Trigger: CCTCAGTGACCTCAGACGTCAGTATGAAACTGAAGT...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTATCAACGTGGCTATACTaGCAGGACAATCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVSTWLY*QDNPEV
Trigger: TACCTCTGGATTGTCCTGTCAGTATAGCCACGTTGA...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGGGCTTCCTCAGCTTTaGGTTTTTCGTCTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLGLPQL*VFRLSV
Trigger: CACGGAAAGACGAAAAACGCAAAGCTGAGGAAGCCC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGCACTCTCTGTCCTACTaGTTCCCACAGAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLHSLSY*FPQNLR
Trigger: CCTCAGATTCTGTGGGAAGCAGTAGGACAGAGAGTG...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTCCAAAGTGCCCTaGGACACATTTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLLSKVP*DTFLSL
Trigger: GAGGGACAAAAATGTGTCCCAGGGCACTTTGGAGAG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 72 bp AGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTaGCATTACATTACAGGTTATGCTTCTAAACCATGG +
Preference number: 4 (lower is better)
Translates to: RKLMLATRELGD*HYITGYASKPW
Trigger: CCATGGTTTAGAAGCATAACCTGTAATGTAATGCAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTATCCATTTCTGTGCTTTaGAGTCTGATCTCACGGATG +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVSISVL*SLISRM
Trigger: CATCCGTGAGATCAGACTTCAAAGCACAGAAATGGA...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGAGGAACATCTGTGTCTaGAGCATCACCTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLRNICV*SITSKA
Trigger: AGCTTTGGAGGTGATGCTTCAGACACAGATGTTCCT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATCACAATTTGTCCTCTaGAGAGGATCACAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLSQFVL*RGSQRA
Trigger: GGCCCTCTGTGATCCTCTGCAGAGGACAAATTGTGA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAGCTGTATCCCAGAGCTaGAGAACTGTTCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLAVSQS*RTVRSP
Trigger: TGGAGAACGAACAGTTCTGCAGCTCTGGGATACAGC...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATCACTAACAGACCCTTaGGGCTTCCAGTCTAAGACG +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLSLTDP*GFQSKT
Trigger: CGTCTTAGACTGGAAGCCCCAAGGGTCTGTTAGTGA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACTTCAGCAAGCTACTTaGGGCCTGGACCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLLQQAT*GLDLDE
Trigger: TTCATCTAGGTCCAGGCCCCAAGTAGCTTGCTGAAG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTTGGCTCCACAAGGTTaGTGTTTTGGTACAAGGTAC +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLLAPQG*CFGTRY
Trigger: GTACCTTGTACCAAAACATCAACCTTGTGGAGCCAA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTACTTGTATTCCACTTCTaGGTCATACTCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLVFHF*VILIGI
Trigger: GATCCCAATGAGTATGACTCAGAAGTGGAATACAAG...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGCACCATCTGCCTTTCTaGAGTAAGACTTGGCAATAC +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLHHLPF*SKTWQY
Trigger: GTATTGCCAAGTCTTACTTCAGAAAGGCAGATGGTG...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACCCTTAAGTGAAGAGTaGCAACTTTCCTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLPLSEE*QLSWAL
Trigger: CAATGCCCAGGAAAGTTGTCACTCTTCACTTAAGGG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTATTAAAGATGATTGGTTaGCCATCAAAGGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLKMIG*PSKALV
Trigger: CACCAGTGCCTTTGATGGTCAACCAATCATCTTTAA...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATCAGCAGGAGGGTTGTaGAACTTGGGTTTATGCAGA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLSAGGL*NLGLCR
Trigger: TCTGCATAAACCCAAGTTGCACAACCCTCCTGCTGA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTACTCTCTTCACCGCAATaGCCAAATTTTCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLSSPQ*PNFPFL
Trigger: CAGAAATGGAAAATTTGGCCATTGCGGTGAAGAGAG...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGAGGGTTGTGCAACTTaGGTTTATGCAGATCACATC +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLEGCAT*VYADHI
Trigger: GATGTGATCTGCATAAACCCAAGTTGCACAACCCTC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGCCACATCTTCCTTTTaGCTTACGCGTTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLATSSF*LTRFDC
Trigger: ACAATCAAAACGCGTAAGTCAAAAGGAAGATGTGGC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGCATCTAACTCACTCTaGAGAAAGGCTATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLASNSL*RKAMFV
Trigger: GACAAACATAGCCTTTCTTCAGAGTGAGTTAGATGC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTACTTGTAAGCCTTCTGTaGGCTAAAAGATTTAGCGTT +
Preference number: 4 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLVSLL*AKRFSV
Trigger: AACGCTAAATCTTTTAGCTCACAGAAGGCTTACAAG...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAAACCATGGGAAGGTTTaGAATCAGCAGGGATACGAA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLNHGKV*NQQGYE
Trigger: TTCGTATCCCTGCTGATTTCAAACCTTCCCATGGTT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTAGTTTCTCTCCAAAGTaGCCTGGGACACATTTTTGT +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLSFSPK*PGTHFC
Trigger: ACAAAAATGTGTCCCAGGGCACTTTGGAGAGAAACT...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAAGTGTCAGTAGGATGTaGCACTCTGTTAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLSVSRM*HSVKSQ
Trigger: TTGGCTCTTAACAGAGTGGCACATCCTACTGACACT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAGACCATCAAAGGCACTaGTGTAATCTCATCAACGTG +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLDHQRH*CNLINV
Trigger: CACGTTGATGAGATTACACCAGTGCCTTTGATGGTC...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTTGACTTACGCGTTTTaGTTGTTCTTCGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLLTYAF*LFFELS
Trigger: AGAAAGCTCGAAGAACAATCAAAACGCGTAAGTCAA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGTTCTCCATCCACAATaGGGGTTTTCATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLVLHPQ*GFSFGN
Trigger: ATTTCCAAATGAAAACCCTCATTGTGGATGGAGAAC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCAGCAAAACACCATCTaGCTTTCTGAAGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLQQNTI*LSEVRL
Trigger: AAGTCTTACTTCAGAAAGGCAGATGGTGTTTTGCTG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGGCAAAAGTTTTCCCATaGCACATAAATAATACCCCC +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLAKVFP*HINNTP
Trigger: GGGGGTATTATTTATGTGGCATGGGAAAACTTTTGC...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTTTCCGGTTAGCTGTTTaGAGTATTTCAATTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLFRLAV*SISICL
Trigger: GAGGCAAATTGAAATACTCCAAACAGCTAACCGGAA...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAAATCAACTCCCAGGGTaGCGCTTATATTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLNQLPG*RLYFLE
Trigger: TTCGAGAAAATATAAGCGCCACCCTGGGAGTTGATT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 72 bp ATATTTATCAGGGCTCAAATACTTAAAGATGATTGGTaGACCATCAAAGGCACTGGTGTAATCTCATCAACG +
Preference number: 4 (lower is better)
Translates to: IFIRAQILKDDW*TIKGTGVISST
Trigger: CGTTGATGAGATTACACCAGTGCCTTTGATGGTCAACCAATCATCTTTAAGTATTTGAGCCCTGATAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
3UTR CAA 72 bp ACCTCAATTTTATCTTCAGCAGGAGGGTTGTGCAACTaGGGTTTATGCAGATCACATCAAGTGTTAAATAAT +
Preference number: 4 (lower is better)
Translates to: TSILSSAGGLCN*GLCRSHQVLNN
Trigger: ATTATTTAACACTTGATGTGATCTGCATAAACCCAAGTTGCACAACCCTCCTGCTGAAGATAAAATTGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR TCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAACATGTTCATATGGCTaGATTAATCTTGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLTCSYG*INLGST
Trigger: TGTGGAGCCAAGATTAATTCAGCCATATGAACATGT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATACAAGGTACTAACTTaGTCTTCTCTGGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLYKVLT*SSLGMN
Trigger: GTTCATTCCCAGAGAAGAGCAAGTTAGTACCTTGTA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTTGGGATTTAGCCATTaGAACAATTCTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLLGFSH*NNSSSV
Trigger: CACAGATGAAGAATTGTTGCAATGGCTAAATCCCAA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR GCA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTGCAACTTGGGTTTATaGAGATCACATCAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: IDYYLRKLMLATRELGDLCNLGL*RSHQVL
Trigger: TAACACTTGATGTGATCTGCATAAACCCAAGTTGCA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CCA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAATACTTAAAGATGATTaGTTGACCATCAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLILKDD*LTIKGT
Trigger: AGTGCCTTTGATGGTCAACCAATCATCTTTAAGTAT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 90 bp CGCCGCGGGGCGCAGGGCCCTCCCTGGAAGGACGGGGCCACCTGCTaGCGCCGGGAGGCCCGGCGAGTTTGGCTCGTCCGGCTGGTTCGG +
Preference number: 5 (lower is better)
Translates to: RRGAQGPPWKDGATC*RREARRVWLVRLVR
Trigger: CCGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTCCCGGCGGCAGCAGGTGGCCCCGTCCTTCCAGGGAGGGCCCTGCGCCCCGCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 90 bp TACTGCCTCGGCGTCGGCCGGCCGCACCCGCAGCTCCGTGCACAGTaGCCGGAACTCCTCGCGCTCCAGGCGCCCCGAGCGGTTCGCGTC +
Preference number: 5 (lower is better)
Translates to: YCLGVGRPHPQLRAQ*PELLALQAPRAVRV
Trigger: GACGCGAACCGCTCGGGGCGCCTGGAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGCCGAGGCAGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CCA 90 bp CTTCGACGACGGTTCGGGCCAGCCCCCAACAGGTCCCGGGAGCGGTaGGGTGCGCCCGGGCTCCAGGCACCGCCAAGGAGCGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRRRFGPAPNRSRER*GAPGLQAPPRSASC
Trigger: GCAGGAGGCGCTCCTTGGCGGTGCCTGGAGCCCGGGCGCACCCCACCGCTCCCGGGACCTGTTGGGGGCTGGCCCGAACCGTCGTCGAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 90 bp GCTGGAATACTGCCTCGGCGTCGGCCGGCCGCACCCGCAGCTCCGTaGACAGTGCCCGGAACTCCTCGCGCTCCAGGCGCCCCGAGCGGT +
Preference number: 5 (lower is better)
Translates to: AGILPRRRPAAPAAP*TVPGTPRAPGAPSG
Trigger: ACCGCTCGGGGCGCCTGGAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGCCGAGGCAGTATTCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 90 bp GAAGGTGATGGCGCCGTCACGGTCGGCGTCCAGCCGCTGGAATACTaGCTCGGCGTCGGCCGGCCGCACCCGCAGCTCCGTGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: EGDGAVTVGVQPLEY*LGVGRPHPQLRAQC
Trigger: GCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGCCGAGGCAGTATTCCAGCGGCTGGACGCCGACCGTGACGGCGCCATCACCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS TCA 90 bp CCCCGCGGAGGGACCCGAGGAAGCCACGCGCGAACTCCTGGAAGGTaGTGGCGCCGTCACGGTCGGCGTCCAGCCGCTGGAATACTGCCT +
Preference number: 5 (lower is better)
Translates to: PRGGTRGSHARTPGR*WRRHGRRPAAGILP
Trigger: AGGCAGTATTCCAGCGGCTGGACGCCGACCGTGACGGCGCCATCACCTTCCAGGAGTTCGCGCGTGGCTTCCTCGGGTCCCTCCGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 90 bp CTGGGAATGAACTTGGCTTCGTCCCCAAGTCGCGCCTGGAAATCCTaGCAAGCCCGGCCGGGACTCGCCGGGCCGCACGAGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGMNLASSPSRAWKS*QARPGLAGPHEVAS
Trigger: GCTGGCCACCTCGTGCGGCCCGGCGAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGACGAAGCCAAGTTCATTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGGAGGCCCGGCGAGTTaGGCTCGTCCGGCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: LSVPCPQRWSLQRQAGLLGGPAS*ARPAGS
Trigger: CGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTCC...AAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS CCA 90 bp TGCTCTTCTCTGGGAATGAACTTGGCTTCGTCCCCAAGTCGCGCCTaGAAATCCTGCCAAGCCCGGCCGGGACTCGCCGGGCCGCACGAG +
Preference number: 5 (lower is better)
Translates to: CSSLGMNLASSPSRA*KSCQARPGLAGPHE
Trigger: CTCGTGCGGCCCGGCGAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGACGAAGCCAAGTTCATTCCCAGAGAAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCTCCCCCAGCCTCGTaGCCGCCTTGCAGTTTGATC +
Preference number: 5 (lower is better)
Translates to: PQRWSLQRQAGLLELWWAPPPAS*PPCSLI
Trigger: GATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGG...AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp TGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGCTGGTTCGGCCACTaGAGGGAACGTCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: CASNQRDSVGVGPSEPGVGWFGH*RERRAG
Trigger: CCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCC...CACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp TTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTTCCCAGTTAGGCTGCTaGGGGGTCAGGGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LSVPCPQRWSLQRQAGLLSQLGC*GVRGQG
Trigger: TCCCTGACCCCTGACCCCCAAGCAGCCTAACTGGGA...AAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp CCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTAATCTGGGAATGAACTaGGCTTCGTCCCCAAGTCGC +
Preference number: 5 (lower is better)
Translates to: PQRWSLQRQAGLLELWWANLGMN*ASSPSR
Trigger: GCGACTTGGGGACGAAGCCAAGTTCATTCCCAGATT...AGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp GTTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCTCCTATTCGGCCATCTaGGCTCCTCCCTCCTCGATT +
Preference number: 5 (lower is better)
Translates to: VRLLGGQGSGTHLRRQSASYSAI*APPSSI
Trigger: AATCGAGGAGGGAGGAGCCAAGATGGCCGAATAGGA...GGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCAAGCAGCCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp GCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGAACTCCCTGACCCCTaGCGCTTCCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: AVFLFVCALPPEVEPTEAELPDP*RFPGEA
Trigger: TGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTC...TGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp TACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGGGTCAGGGACCCACTaGAGGAGGCAGTCTGCCCGT +
Preference number: 5 (lower is better)
Translates to: YLRWKCRNHPSSASLTLGGSGTH*RRQSAR
Trigger: ACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCC...TCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp AAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCATCTACTTTTGGTCTTaGATGATGGTGATGTACAGA +
Preference number: 5 (lower is better)
Translates to: KQAWAMAGAPPPASLPPCIYFWS*MMVMYR
Trigger: TCTGTACATCACCATCATCAAAGACCAAAAGTAGAT...GCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCGGCTGGTTCGGCCACTaGAGGGAACGTCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: HQRHWCNLINVAILTGQSGWFGH*RERRAG
Trigger: CCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCC...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGTCTCTGGGAATGAACTaGGCTTCGTCCCCAAGTCGC +
Preference number: 5 (lower is better)
Translates to: QVLTPLALRGISVGRSGKSLGMN*ASSPSR
Trigger: GCGACTTGGGGACGAAGCCAAGTTCATTCCCAGAGA...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAGTGTTGACTCCTTTGGCTCTTAGAGGCATCTCAGTGGGGAGGTCTGGGAAGAACTGCATAGCTGCCTaGTCCTGGGCTCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: QVLTPLALRGISVGRSGKNCIAA*SWALFT
Trigger: GGTGAAGAGAGCCCAGGACAAGGCAGCTATGCAGTT...CTTCCCAGACCTCCCCACTGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 90 bp TCGAAGCAGCTTTCAGGCAGGCTGTCAACTTCACAATTTGTCCTCTaGAGAGGATCACAGAGGGCCAGGGAGTCACAGTCCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: SKQLSGRLSTSQFVL*RGSQRARESQSSST
Trigger: TGTGGATGAGGACTGTGACTCCCTGGCCCTCTGTGATCCTCTGCAGAGGACAAATTGTGAAGTTGACAGCCTGCCTGAAAGCTGCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 90 bp TCTGAAGCATCACCTCCAAAGCTCTCCTGCACCCCGTGTGACCTCTaGAATCCCCTCTGGTGCTTGTATTCCACTTCTGAGTCATACTCA +
Preference number: 5 (lower is better)
Translates to: SEASPPKLSCTPCDL*NPLWCLYSTSESYS
Trigger: TGAGTATGACTCAGAAGTGGAATACAAGCACCAGAGGGGATTTCAGAGGTCACACGGGGTGCAGGAGAGCTTTGGAGGTGATGCTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGGAGGCCCGGCGAGTTaGGCTCGTCCGGCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLGGPAS*ARPAGS
Trigger: CGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTCC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp GAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGCTCCTCCCTCCTCGATaGTCCAAAGTGTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: ENHCSLQSCQTGTLKSAELLPPR*SKVFLC
Trigger: GCAGAGAAACACTTTGGACAATCGAGGAGGGAGGAG...CTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS GCA 90 bp TCACAGAATAATGCCCCATACGTCATGGCCAGTTTCTCTCCAAAGTaGCCTGGGACACATTTTTGTCCCTCTGTAGCAGCAGTGTCACGA +
Preference number: 5 (lower is better)
Translates to: SQNNAPYVMASFSPK*PGTHFCPSVAAVSR
Trigger: TCGTGACACTGCTGCTACAGAGGGACAAAAATGTGTCCCAGGGCACTTTGGAGAGAAACTGGCCATGACGTATGGGGCATTATTCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 90 bp CAGCTGTATCCCAGAGCTGCAGAACTGTTCGTTCTCCATCCACAATaGGGGTTTTCATTTGGAAATCAACTCCCAGGGTGGCGCTTATAT +
Preference number: 5 (lower is better)
Translates to: QLYPRAAELFVLHPQ*GFSFGNQLPGWRLY
Trigger: ATATAAGCGCCACCCTGGGAGTTGATTTCCAAATGAAAACCCTCATTGTGGATGGAGAACGAACAGTTCTGCAGCTCTGGGATACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCAGGGCTTCCTCAGCTTaGCGTTTTTCGTCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: HQRHWCNLINVAILTGQSRASSA*RFSSFR
Trigger: ACGGAAAGACGAAAAACGCAAAGCTGAGGAAGCCCT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 90 bp AGCTTTTTAATGGTCACCTGCAGATCTCCTACTTCAGTTTCATACTaGCGTCTGAGGTCACTGAGGGCTTCCTCAGCTTTGCGTTTTTCG +
Preference number: 5 (lower is better)
Translates to: SFLMVTCRSPTSVSY*RLRSLRASSALRFS
Trigger: CGAAAAACGCAAAGCTGAGGAAGCCCTCAGTGACCTCAGACGTCAGTATGAAACTGAAGTAGGAGATCTGCAGGTGACCATTAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 90 bp GGCTTCCTCAGCTTTGCGTTTTTCGTCTTTCCGTGTCTTATGTTCTaGAGCCTGAATCCTCTGATCCATTTCCTCTTCCAACTCACTCAA +
Preference number: 5 (lower is better)
Translates to: GFLSFAFFVFPCLMF*SLNPLIHFLFQLTQ
Trigger: TTGAGTGAGTTGGAAGAGGAAATGGATCAGAGGATTCAGGCTGCAGAACATAAGACACGGAAAGACGAAAAACGCAAAGCTGAGGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CATCAAAGGCACTGGTGTAATCTCATCAACGTGGCTATACTGACAGGACAATCCAATCCCCTCTGGTGCTaGTATTCCACTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: HQRHWCNLINVAILTGQSNPLWC*YSTSES
Trigger: TGACTCAGAAGTGGAATACAAGCACCAGAGGGGATT...GGATTGTCCTGTCAGTATAGCCACGTTGATGAGATTACACCAGTGCCTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CCA 90 bp GGCTTTCTTGATGAACTAACAATGCTGCCTTCACTAACAGACCCTTaGGGCTTCCAGTCTAAGACGGAAGCCACATCTTCTAAACCAAAT +
Preference number: 5 (lower is better)
Translates to: GFLDELTMLPSLTDP*GFQSKTEATSSKPN
Trigger: ATTTGGTTTAGAAGATGTGGCTTCCGTCTTAGACTGGAAGCCCCAAGGGTCTGTTAGTGAAGGCAGCATTGTTAGTTCATCAAGAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp AACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTAGATGTCCTTTCTGGTaGTTAGTTTTCCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: NHCSLQSCQTGTLKSAEVRCPFW*LVFLLT
Trigger: TGTTAGAAGGAAAACTAACAACCAGAAAGGACATCT...AACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACCCTGGGACACATTTTaGTCCCTCTGTAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLPWDTF*SLCSSS
Trigger: ACTGCTGCTACAGAGGGACAAAAATGTGTCCCAGGG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTCTTCAGCAGGAGGGTaGTGCAACTTGGGTTTATGC +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLSSAGG*CNLGLC
Trigger: GCATAAACCCAAGTTGCACAACCCTCCTGCTGAAGA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTATCACGAATGTCAGCCTaGTTTCCTACCAGCATAATG +
Preference number: 5 (lower is better)
Translates to: VAILTGQSRGKDYENTSVSRMSA*FPTSIM
Trigger: CATTATGCTGGTAGGAAACAAGGCTGACATTCGTGA...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTAGGTGACTTTTTGGAATaGGTCCCGGTTAGATTGGTA +
Preference number: 5 (lower is better)
Translates to: VAILTGQSRGKDYENTSVGDFLE*VPVRLV
Trigger: TACCAATCTAACCGGGACCAATTCCAAAAAGTCACC...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGCAAGTGTTGACTCCTTaGGCTCTTAGAGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLQVLTP*ALRGIS
Trigger: TGAGATGCCTCTAAGAGCCAAAGGAGTCAACACTTG...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 90 bp AAAGCTTTTCTCACATGTAACATCATACAGCAGCAAAACACCATCTaGCTTTCTGAAGTAAGACTTGGCAATACTTCTGAATCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KAFLTCNIIQQQNTI*LSEVRLGNTSESLL
Trigger: CAGGAGAGATTCAGAAGTATTGCCAAGTCTTACTTCAGAAAGGCAGATGGTGTTTTGCTGCTGTATGATGTTACATGTGAGAAAAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTTGTCAACTTCACAATTaGTCCTCTGCAGAGGATCAC +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLCQLHN*SSAEDH
Trigger: GTGATCCTCTGCAGAGGACAAATTGTGAAGTTGACA...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTTCTGAGTCATACTCATaGGGATCTCTCAAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLSESYS*GSLKVD
Trigger: GTCTACCTTGAGAGATCCCAATGAGTATGACTCAGA...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTATTGGTCCCGGTTAGATaGGTAATGGATCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLLVPVR*VMDLLS
Trigger: TGACAGCAGATCCATTACCAATCTAACCGGGACCAA...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGATCTGTGGTGACTTTTaGGAATTGGTCCCGGTTAGA +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLICGDF*ELVPVR
Trigger: TCTAACCGGGACCAATTCCAAAAAGTCACCACAGAT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAACAGGCCAAGGATGTTaGGGATTTAGCCATTGCAAC +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLTGQGC*GFSHCN
Trigger: GTTGCAATGGCTAAATCCCAAACATCCTTGGCCTGT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGAAACCATGGGAAGGTTaGAAATCAGCAGGGATACGA +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLKPWEG*KSAGIR
Trigger: TCGTATCCCTGCTGATTTCAAACCTTCCCATGGTTT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp GTGGCTATACTGACAGGACAATCCAGAGGTAAAGACTATGAAAATACTTCTGTACTTAAAGATGATTGGTaGACCATCAAAGGCACTGGT +
Preference number: 5 (lower is better)
Translates to: VAILTGQSRGKDYENTSVLKDDW*TIKGTG
Trigger: ACCAGTGCCTTTGATGGTCAACCAATCATCTTTAAG...TACAGAAGTATTTTCATAGTCTTTACCTCTGGATTGTCCTGTCAGTATAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAGGAGGGTTGTGCAACTaGGGTTTATGCAGATCACAT +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLGGLCN*GLCRSH
Trigger: ATGTGATCTGCATAAACCCAAGTTGCACAACCCTCC...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGTACAAGGTACTAACTaGCTCTTCTCTGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLVQGTN*LFSGNE
Trigger: TTCATTCCCAGAGAAGAGCAAGTTAGTACCTTGTAC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACTTGGCTCCACAAGGTaGATGTTTTGGTACAAGGTA +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLLGSTR*MFWYKV
Trigger: TACCTTGTACCAAAACATCAACCTTGTGGAGCCAAG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTTCCATTTCTGTGCTTaGAAGTCTGATCTCACGGAT +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLFHFCA*KSDLTD
Trigger: ATCCGTGAGATCAGACTTCAAAGCACAGAAATGGAA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTTCCGGTTAGCTGTTaGGAGTATTTCAATTTGCCT +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLLPVSC*EYFNLP
Trigger: AGGCAAATTGAAATACTCCAAACAGCTAACCGGAAG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTAATGAGGGTTTTCATTaGGAAATCAACTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLNEGFH*EINSQG
Trigger: ACCCTGGGAGTTGATTTCCAAATGAAAACCCTCATT...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCACAAGGTTGATGTTTaGGTACAAGGTACTAACTTG +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLHKVDV*VQGTNL
Trigger: CAAGTTAGTACCTTGTACCAAAACATCAACCTTGTG...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp CAAAACGTTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTGAAGAAAGGCTATGTTaGTCTGTGCTTCTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: QNVGNNHESPSIQSFKKLEERLC*SVLLKG
Trigger: ACCTTTTAGAAGCACAGACAAACATAGCCTTTCTTC...AAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAACGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTACTAAAAGATTTAGCGTaGTCATCTACCAGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLLKDLA*SSTRSV
Trigger: GACAGACCTGGTAGATGACAACGCTAAATCTTTTAG...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAGATCTGCTGTCATCCTaGTCAGTTCTCTTTTTCACT +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLDLLSS*SVLFFT
Trigger: AGTGAAAAAGAGAACTGACAAGGATGACAGCAGATC...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp TTGGTAATAATCATGAATCTCCCAGCATACAGAGCTTTAAGAAGCTTCTCTTTAAGGGAGTTAGGGGACTaGCATTACATTACAGGTTAT +
Preference number: 5 (lower is better)
Translates to: LVIIMNLPAYRALRSFSLRELGD*HYITGY
Trigger: ATAACCTGTAATGTAATGCAAGTCCCCTAACTCCCT...TAAAGAGAAGCTTCTTAAAGCTCTGTATGCTGGGAGATTCATGATTATTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGTCTCGAAATTCATTCTaGCAAAGTCTCATGAGGAAA +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLSRNSF*QSLMRK
Trigger: TTTCCTCATGAGACTTTGCAAGAATGAATTTCGAGA...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS-3UTR CAA 90 bp ATTGATTATTACTTAAGGAAGTTAATGTTAGCAACCAGGGAGTTAGGGGACTTGATGTTAGAACCATCTTaGGCACTTGTTTCACAGAAT +
Preference number: 5 (lower is better)
Translates to: IDYYLRKLMLATRELGDLMLEPS*ALVSQN
Trigger: ATTCTGTGAAACAAGTGCCAAAGATGGTTCTAACAT...CAAGTCCCCTAACTCCCTGGTTGCTAACATTAACTTCCTTAAGTAATAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 72 bp GGCGTCGGCCGGCCGCACCCGCAGCTCCGTGCACAGTaGCCGGAACTCCTCGCGCTCCAGGCGCCCCGAGCG +
Preference number: 6 (lower is better)
Translates to: GVGRPHPQLRAQ*PELLALQAPRA
Trigger: CGCTCGGGGCGCCTGGAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 72 bp GCGCAGGGCCCTCCCTGGAAGGACGGGGCCACCTGCTaGCGCCGGGAGGCCCGGCGAGTTTGGCTCGTCCGG +
Preference number: 6 (lower is better)
Translates to: AQGPPWKDGATC*RREARRVWLVR
Trigger: CCGGACGAGCCAAACTCGCCGGGCCTCCCGGCGGCAGCAGGTGGCCCCGTCCTTCCAGGGAGGGCCCTGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 72 bp GGGGCGCAGGGCCCTCCCTGGAAGGACGGGGCCACCTaGTGCCGCCGGGAGGCCCGGCGAGTTTGGCTCGTC +
Preference number: 6 (lower is better)
Translates to: GAQGPPWKDGAT*CRREARRVWLV
Trigger: GACGAGCCAAACTCGCCGGGCCTCCCGGCGGCAGCAGGTGGCCCCGTCCTTCCAGGGAGGGCCCTGCGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 72 bp CTGCCTCGGCGTCGGCCGGCCGCACCCGCAGCTCCGTaGACAGTGCCCGGAACTCCTCGCGCTCCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: LPRRRPAAPAAP*TVPGTPRAPGA
Trigger: GGCGCCTGGAGCGCGAGGAGTTCCGGGCACTGTGCACGGAGCTGCGGGTGCGGCCGGCCGACGCCGAGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CCA 72 bp CGGTTCGGGCCAGCCCCCAACAGGTCCCGGGAGCGGTaGGGTGCGCCCGGGCTCCAGGCACCGCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: RFGPAPNRSRER*GAPGLQAPPRS
Trigger: GCTCCTTGGCGGTGCCTGGAGCCCGGGCGCACCCCACCGCTCCCGGGACCTGTTGGGGGCTGGCCCGAACCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 72 bp GGCGCCGTCACGGTCGGCGTCCAGCCGCTGGAATACTaGCTCGGCGTCGGCCGGCCGCACCCGCAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: GAVTVGVQPLEY*LGVGRPHPQLR
Trigger: ACGGAGCTGCGGGTGCGGCCGGCCGACGCCGAGGCAGTATTCCAGCGGCTGGACGCCGACCGTGACGGCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS TCA 72 bp GCGCCCCGAGCGGTTCGCGTCGCAGGCGGCGAAGACTaGGCGCAGCCGGGCCAGCTCCTCTCCGTCCCCATC +
Preference number: 6 (lower is better)
Translates to: APRAVRVAGGED*AQPGQLLSVPI
Trigger: GATGGGGACGGAGAGGAGCTGGCCCGGCTGCGCTCAGTCTTCGCCGCCTGCGACGCGAACCGCTCGGGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CCA 72 bp GCCGCCGGGAGGCCCGGCGAGTTTGGCTCGTCCGGCTaGTTCGGCCACTTGAGGGAACGTCGGGCGGGGCGA +
Preference number: 6 (lower is better)
Translates to: AAGRPGEFGSSG*FGHLRERRAGR
Trigger: TCGCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTCCCGGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CAA 90 bp GCCGGGAGGCCCGGCGAGTTTGGCTCGTCCGGCTGGTTCGGCCACTaGAGGGAACGTCGGGCGGGGCGAGGAACGTCGGGGGTGGCCGAG +
Preference number: 6 (lower is better)
Translates to: AGRPGEFGSSGWFGH*RERRAGRGTSGVAE
Trigger: CTCGGCCACCCCCGACGTTCCTCGCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAACTCGCCGGGCCTCCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CCA 72 bp AAGGTGATGGCGCCGTCACGGTCGGCGTCCAGCCGCTaGAATACTGCCTCGGCGTCGGCCGGCCGCACCCGC +
Preference number: 6 (lower is better)
Translates to: KVMAPSRSASSR*NTASASAGRTR
Trigger: GCGGGTGCGGCCGGCCGACGCCGAGGCAGTATTCCAGCGGCTGGACGCCGACCGTGACGGCGCCATCACCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS TCA 72 bp CCGGCGAGTTTGGCTCGTCCGGCTGGTTCGGCCACTTaGGGGAACGTCGGGCGGGGCGAGGAACGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: PASLARPAGSAT*GNVGRGEERRG
Trigger: CCCCCGACGTTCCTCGCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAACTCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CAA 72 bp CCCGGCGAGTTTGGCTCGTCCGGCTGGTTCGGCCACTaGAGGGAACGTCGGGCGGGGCGAGGAACGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PGEFGSSGWFGH*RERRAGRGTSG
Trigger: CCCCGACGTTCCTCGCCCCGCCCGACGTTCCCTCAAGTGGCCGAACCAGCCGGACGAGCCAAACTCGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS TCA 72 bp GGGCTCCAGGCACCGCCAAGGAGCGCCTCCTGCGACTaGGCGCCCAAGCGCCGAGGTGGCTCTCGCCACTTT +
Preference number: 6 (lower is better)
Translates to: GLQAPPRSASCD*APKRRGGSRHF
Trigger: AAAGTGGCGAGAGCCACCTCGGCGCTTGGGCGCTCAGTCGCAGGAGGCGCTCCTTGGCGGTGCCTGGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS TCA 72 bp GGGACCCGAGGAAGCCACGCGCGAACTCCTGGAAGGTaGTGGCGCCGTCACGGTCGGCGTCCAGCCGCTGGA +
Preference number: 6 (lower is better)
Translates to: GTRGSHARTPGR*WRRHGRRPAAG
Trigger: TCCAGCGGCTGGACGCCGACCGTGACGGCGCCATCACCTTCCAGGAGTTCGCGCGTGGCTTCCTCGGGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS GCA 72 bp AACTTGGCTTCGTCCCCAAGTCGCGCCTGGAAATCCTaGCAAGCCCGGCCGGGACTCGCCGGGCCGCACGAG +
Preference number: 6 (lower is better)
Translates to: NLASSPSRAWKS*QARPGLAGPHE
Trigger: CTCGTGCGGCCCGGCGAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGACGAAGCCAAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CCA 72 bp CTGGGAATGAACTTGGCTTCGTCCCCAAGTCGCGCCTaGAAATCCTGCCAAGCCCGGCCGGGACTCGCCGGG +
Preference number: 6 (lower is better)
Translates to: LGMNLASSPSRA*KSCQARPGLAG
Trigger: CCCGGCGAGTCCCGGCCGGGCTTGGCAGGATTTCCAGGCGCGACTTGGGGACGAAGCCAAGTTCATTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340717.4
ENST00000376447.4
CDS CAA 90 bp AGCCGCTGTCGAAGCAGCTTTCAGGCAGGCTGTCAACTTCACAATTaGTCCTCTGCAGAGGATCACAGAGGGCCAGGGAGTCACAGTCCT +
Preference number: 6 (lower is better)
Translates to: SRCRSSFQAGCQLHN*SSAEDHRGPGSHSP
Trigger: AGGACTGTGACTCCCTGGCCCTCTGTGATCCTCTGCAGAGGACAAATTGTGAAGTTGACAGCCTGCCTGAAAGCTGCTTCGACAGCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp TCACCTCCAAAGCTCTCCTGCACCCCGTGTGACCTCTaGAATCCCCTCTGGTGCTTGTATTCCACTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SPPKLSCTPCDL*NPLWCLYSTSE
Trigger: CTCAGAAGTGGAATACAAGCACCAGAGGGGATTTCAGAGGTCACACGGGGTGCAGGAGAGCTTTGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CCA 72 bp CCCATACGTCATGGCCAGTTTCTCTCCAAAGTGCCCTaGGACACATTTTTGTCCCTCTGTAGCAGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: PIRHGQFLSKVP*DTFLSLCSSSV
Trigger: GACACTGCTGCTACAGAGGGACAAAAATGTGTCCCAGGGCACTTTGGAGAGAAACTGGCCATGACGTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 90 bp ATACGTCATGGCCAGTTTCTCTCCAAAGTGCCCTGGGACACATTTTaGTCCCTCTGTAGCAGCAGTGTCACGAATGTCAGCCTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: IRHGQFLSKVPWDTF*SLCSSSVTNVSLVS
Trigger: GGAAACAAGGCTGACATTCGTGACACTGCTGCTACAGAGGGACAAAAATGTGTCCCAGGGCACTTTGGAGAGAAACTGGCCATGACGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp ATGGTCACCTGCAGATCTCCTACTTCAGTTTCATACTaGCGTCTGAGGTCACTGAGGGCTTCCTCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: MVTCRSPTSVSY*RLRSLRASSAL
Trigger: CAAAGCTGAGGAAGCCCTCAGTGACCTCAGACGTCAGTATGAAACTGAAGTAGGAGATCTGCAGGTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp CCCAGAGCTGCAGAACTGTTCGTTCTCCATCCACAATaGGGGTTTTCATTTGGAAATCAACTCCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: PRAAELFVLHPQ*GFSFGNQLPGW
Trigger: CCACCCTGGGAGTTGATTTCCAAATGAAAACCCTCATTGTGGATGGAGAACGAACAGTTCTGCAGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS GCA 72 bp CTTGCAAAGTCTCATGAGGAAACTAGACTTCCCCACTaGAGCGTCCCCAGCAAGTACAATCTTGTAAGCCTT +
Preference number: 6 (lower is better)
Translates to: LAKSHEETRLPH*SVPSKYNLVSL
Trigger: AAGGCTTACAAGATTGTACTTGCTGGGGACGCTGCAGTGGGGAAGTCTAGTTTCCTCATGAGACTTTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CCA 72 bp GATGAACTAACAATGCTGCCTTCACTAACAGACCCTTaGGGCTTCCAGTCTAAGACGGAAGCCACATCTTCT +
Preference number: 6 (lower is better)
Translates to: DELTMLPSLTDP*GFQSKTEATSS
Trigger: AGAAGATGTGGCTTCCGTCTTAGACTGGAAGCCCCAAGGGTCTGTTAGTGAAGGCAGCATTGTTAGTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 72 bp CTCTGGTGCTTGTATTCCACTTCTGAGTCATACTCATaGGGATCTCTCAAGGTAGACAAGCCGCTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: LWCLYSTSESYS*GSLKVDKPLSK
Trigger: CTTCGACAGCGGCTTGTCTACCTTGAGAGATCCCAATGAGTATGACTCAGAAGTGGAATACAAGCACCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 90 bp TCTCGAGCAAGGTGCAGAACAGCCTCCACTATGTTAGAACCATCTTaGGCACTTGTTTCACAGAATAATGCCCCATACGTCATGGCCAGT +
Preference number: 6 (lower is better)
Translates to: SRARCRTASTMLEPS*ALVSQNNAPYVMAS
Trigger: ACTGGCCATGACGTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGTTCTAACATAGTGGAGGCTGTTCTGCACCTTGCTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp CCTCTGAAATCCCCTCTGGTGCTTGTATTCCACTTCTaGGTCATACTCATTGGGATCTCTCAAGGTAGACAA +
Preference number: 6 (lower is better)
Translates to: PLKSPLVLVFHF*VILIGISQGRQ
Trigger: TTGTCTACCTTGAGAGATCCCAATGAGTATGACTCAGAAGTGGAATACAAGCACCAGAGGGGATTTCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp AGCGTCCCCAGCAAGTACAATCTTGTAAGCCTTCTGTaGGCTAAAAGATTTAGCGTTGTCATCTACCAGGTC +
Preference number: 6 (lower is better)
Translates to: SVPSKYNLVSLL*AKRFSVVIYQV
Trigger: GACCTGGTAGATGACAACGCTAAATCTTTTAGCTCACAGAAGGCTTACAAGATTGTACTTGCTGGGGACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 72 bp AGGTGCAGAACAGCCTCCACTATGTTAGAACCATCTTaGGCACTTGTTTCACAGAATAATGCCCCATACGTC +
Preference number: 6 (lower is better)
Translates to: RCRTASTMLEPS*ALVSQNNAPYV
Trigger: GACGTATGGGGCATTATTCTGTGAAACAAGTGCCAAAGATGGTTCTAACATAGTGGAGGCTGTTCTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 72 bp ATCTGTGGTGACTTTTTGGAATTGGTCCCGGTTAGATaGGTAATGGATCTGCTGTCATCCTTGTCAGTTCTC +
Preference number: 6 (lower is better)
Translates to: ICGDFLELVPVR*VMDLLSSLSVL
Trigger: GAGAACTGACAAGGATGACAGCAGATCCATTACCAATCTAACCGGGACCAATTCCAAAAAGTCACCACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS CAA 72 bp AACTGTTCGTTCTCCATCCACAATGAGGGTTTTCATTaGGAAATCAACTCCCAGGGTGGCGCTTATATTTTC +
Preference number: 6 (lower is better)
Translates to: NCSFSIHNEGFH*EINSQGGAYIF
Trigger: GAAAATATAAGCGCCACCCTGGGAGTTGATTTCCAAATGAAAACCCTCATTGTGGATGGAGAACGAACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376447.4
CDS TCA 72 bp TGTTATGAGATGCCTCACGAACACAAATGCAGGTTTTaGAATTGTGTAGCCAAATCTGGGAATGAACTTGGC +
Preference number: 6 (lower is better)
Translates to: CYEMPHEHKCRF*NCVAKSGNELG
Trigger: GCCAAGTTCATTCCCAGATTTGGCTACACAATTTCAAAACCTGCATTTGTGTTCGTGAGGCATCTCATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS GCA 72 bp TTTTTAGCCCATGACAATGCACACAGTGTTATGAGATaGCTCACGAACACAAATGCAGGTTTTGAAATTGTG +
Preference number: 6 (lower is better)
Translates to: FLAHDNAHSVMR*LTNTNAGFEIV
Trigger: CACAATTTCAAAACCTGCATTTGTGTTCGTGAGGCATCTCATAACACTGTGTGCATTGTCATGGGCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340717.4
CDS GCA 72 bp AATTTGCCTCTCAAGACTATTTCGATCTTCTGTGTATaGTCGGATTATTTCCAGATCCCTTTCAGTATTCAG +
Preference number: 6 (lower is better)
Translates to: NLPLKTISIFCV*SDYFQIPFSIQ
Trigger: CTGAATACTGAAAGGGATCTGGAAATAATCCGAGCATACACAGAAGATCGAAATAGTCTTGAGAGGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376447.4