RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100302

Ensembl transcript IDs: ENST00000216127.5

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCAGACGAATGTGCGGAGGCCAGCGCCCGGGGGCCTCCAGTCTaGTGCCTAAGGTCTGTGAACAAGACTGCTGCCGGGGCCTCGGTG +
Preference number: 1 (lower is better)
Translates to: KADECAEASARGPPV*CLRSVNKTAAGASV
Trigger: CACCGAGGCCCCGGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCCTCCGCACATTCGTCTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp GAGAGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTaGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACAC +
Preference number: 1 (lower is better)
Translates to: ERRLRNAVRRWAWSK*WAWSRRCGHAPFRH
Trigger: GTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp CTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTaGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAGTCCAC +
Preference number: 1 (lower is better)
Translates to: LRNAVRRWAWSKWWA*SRRCGHAPFRHRVH
Trigger: GTGGACTCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTaGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGA +
Preference number: 1 (lower is better)
Translates to: RRLRNAVRRWAWSKW*AWSRRCGHAPFRHR
Trigger: TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp ATGAAACCACCAAGGAGCTGTGGACAAGCGGACTCAGGAAAGCTGTaGGAAGGCAGACGAATGTGCGGAGGCCAGCGCCCGGGGGCCTCC +
Preference number: 1 (lower is better)
Translates to: MKPPRSCGQADSGKL*EGRRMCGGQRPGAS
Trigger: GGAGGCCCCCGGGCGCTGGCCTCCGCACATTCGTCTGCCTTCTCACAGCTTTCCTGAGTCCGCTTGTCCACAGCTCCTTGGTGGTTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp ACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTaGGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGT +
Preference number: 1 (lower is better)
Translates to: TTKHNCRAEGPRRGG*GTRSGGGRGLSGGR
Trigger: ACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp TTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTaGGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCT +
Preference number: 1 (lower is better)
Translates to: LIVYTEIHGGGAVPG*ERATHRCSQGTWSA
Trigger: AGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCTCACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp GGGGTGGGAGGGGGTGCAGAGGCAGCTGAACCAGAGCGTAAGAGTTaGAGGGCTGGGAGAGAAGTTCTCCCAGCTGCCACCCAAACCAAG +
Preference number: 1 (lower is better)
Translates to: GVGGGAEAAEPERKS*RAGREVLPAATQTK
Trigger: CTTGGTTTGGGTGGCAGCTGGGAGAACTTCTCTCCCAGCCCTGCAACTCTTACGCTCTGGTTCAGCTGCCTCTGCACCCCCTCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp TGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAGTCCACTaGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCT +
Preference number: 1 (lower is better)
Translates to: WSRRCGHAPFRHRVH*LNVRRSWGPTCVCA
Trigger: AGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGACTCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp TTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTaGGTGAGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTC +
Preference number: 1 (lower is better)
Translates to: FIDSVHGDPWWRGCA*VRAGHTPVQPRYLV
Trigger: GACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCTCACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp CCCAGGGGCCAAGCATCAAGAGAGGGAGCACATCGTGGTATGTACTaGATGCCCAGCGCTAGCTTGCTTCTGCCACCCACAGACTTGCTG +
Preference number: 1 (lower is better)
Translates to: PRGQASREGAHRGMY*MPSASLLLPPTDLL
Trigger: CAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTGATGCTTGGCCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp GCAGGGCTGGGAGAGAAGTTCTCCCAGCTGCCACCCAAACCAAGCTaGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCTGGCCTTC +
Preference number: 1 (lower is better)
Translates to: AGLGEKFSQLPPKPS*VLCQERGDLSHLAF
Trigger: GAAGGCCAGATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCTGGGAGAACTTCTCTCCCAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp GGGGCCAAGCATCAAGAGAGGGAGCACATCGTGGTATGTACTGAATaGCCAGCGCTAGCTTGCTTCTGCCACCCACAGACTTGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: GAKHQEREHIVVCTE*PALACFCHPQTCCV
Trigger: CACACAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTGATGCTTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp GCCCACCCCACGCTTGTGCAATTGTCTGTAAACCGTGGAGCTCAATaGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTG +
Preference number: 1 (lower is better)
Translates to: AHPTLVQLSVNRGAQ*RRSMSSCKQATETL
Trigger: CAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGTGGGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp AAATGCTTGAGGAACGAGCACAGTAGAGGGCAGCCTGGTTCTAGGTaGAGCTGTACCCTGAATTTGCTAGGGGACAAAGGTGGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: KCLRNEHSRGQPGSR*SCTLNLLGDKGGAW
Trigger: CCAGGCCCCACCTTTGTCCCCTAGCAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTGCCCTCTACTGTGCTCGTTCCTCAAGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp GGAGAGAAGTTCTCCCAGCTGCCACCCAAACCAAGCTGGGTGTTATaGCAGGAGAGAGGAGACCTTTCTCATCTGGCCTTCTGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: GEKFSQLPPKPSWVL*QERGDLSHLAFCVL
Trigger: AAGGACACAGAAGGCCAGATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCTGGGAGAACTTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp TGTACTGAATGCCCAGCGCTAGCTTGCTTCTGCCACCCACAGACTTaGTGTGTGACCTGGAGGAAGTTACTTACCCTCTCTGAACCTCAG +
Preference number: 1 (lower is better)
Translates to: CTECPALACFCHPQT*CVTWRKLLTLSEPQ
Trigger: CTGAGGTTCAGAGAGGGTAAGTAACTTCCTCCAGGTCACACAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp GAGCACATCGTGGTATGTACTGAATGCCCAGCGCTAGCTTGCTTCTaGCACCCACAGACTTGCTGTGTGACCTGGAGGAAGTTACTTACC +
Preference number: 1 (lower is better)
Translates to: EHIVVCTECPALACF*HPQTCCVTWRKLLT
Trigger: GGTAAGTAACTTCCTCCAGGTCACACAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 90 bp AGAGATGTGTCCTCCCACAGAGGAGATGAAACCACCAAGGAGCTGTaGACAAGCGGACTCAGGAAAGCTGTGAGAAGGCAGACGAATGTG +
Preference number: 1 (lower is better)
Translates to: RDVSSHRGDETTKEL*TSGLRKAVRRQTNV
Trigger: CACATTCGTCTGCCTTCTCACAGCTTTCCTGAGTCCGCTTGTCCACAGCTCCTTGGTGGTTTCATCTCCTCTGTGGGAGGACACATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp TTCTGTGTCCTTTTCATCCTGAGGCTTGTCCCAGGAGGCTCCATATaGCGCAGCAATCCTCACCCCTCTGGCATCAACATTTCTTCCAAC +
Preference number: 1 (lower is better)
Translates to: FCVLFILRLVPGGSI*RSNPHPSGINISSN
Trigger: GTTGGAAGAAATGTTGATGCCAGAGGGGTGAGGATTGCTGCGTCATATGGAGCCTCCTGGGACAAGCCTCAGGATGAAAAGGACACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 90 bp AACATTTCTTCCAACCCCAGGAGAGGAAGGTGTAACTTGAGTCTCTaGCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAG +
Preference number: 1 (lower is better)
Translates to: NISSNPRRGRCNLSL*LTLEAAEMCPPTEE
Trigger: CTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCTCCTGGGGTTGGAAGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp TACATGGGCATGGTGTACACAATATCTACAGGGACCCTCACAGACTaGTCTAGGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: YMGMVYTISTGTLTD*SRERVEDKMSQSPE
Trigger: TTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCCTAGATCAGTCTGTGAGGGTCCCTGTAGATATTGTGTACACCATGCCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 90 bp ACTAGGCTTTTACAGTACAATGATTTCCATTTCTACTACTATACATaGCACGAAAACAGCTGCAACCACAACAAAGCACAACTGTCGGGC +
Preference number: 1 (lower is better)
Translates to: TRLLQYNDFHFYYYT*HENSCNHNKAQLSG
Trigger: GCCCGACAGTTGTGCTTTGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCATTGTACTGTAAAAGCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTCTGGGGCCACCTCCCTaGAGGCACTGGCCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEALGPPP*RHWPSP
Trigger: GGGGCTTGGCCAGTGCCTTCAGGGAGGTGGCCCCAG...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCATGTGAACAAGACTGCTaGCGGGGCCTCGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSCEQDC*RGLGGE
Trigger: CTCCCCACCGAGGCCCCGGCAGCAGTCTTGTTCACA...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCAGGGCCAAGGCTGGGGTaGAGGTGCAGGTATGCAGAG +
Preference number: 2 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSGPRLG*RCRYAE
Trigger: CTCTGCATACCTGCACCTGCACCCCAGCCTTGGCCC...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGCCAGGAGGCTCCATATaGCGCAGCAATCCTCACCCC +
Preference number: 2 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKPGGSI*RSNPHP
Trigger: GGGGTGAGGATTGCTGCGTCATATGGAGCCTCCTGG...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCTGCCGGGGCCTCGGTaGGGAGATGCGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHLPGPR*GDAHSG
Trigger: CCCACTGTGCGCATCTCCCCACCGAGGCCCCGGCAG...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGGCGTGGTCTAAGTGGTaGGCGTGGTCTAGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKAWSKW*AWSRRC
Trigger: ACACCTCCTAGACCACGCCCACCACTTAGACCACGC...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTGTCAGGAGGTGGGCGTaGTCTAAGTGGTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEAVRRWA*SKWWAW
Trigger: CCACGCCCACCACTTAGACCACGCCCACCTCCTGAC...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCGGGAGATGCGCACAGTaGGCATCTGGGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: SCHPNQAGCYARREETFLGRCAQ*ASGATS
Trigger: GGAGGTGGCCCCAGATGCCCACTGTGCGCATCTCCC...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGCCACCCAAACCAAGCTaGGTGTTATGCCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGPPKPS*VLCQER
Trigger: TCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGG...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGAACGCGGTCAGGAGGTaGGCGTGGTCTAAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMNAVRR*AWSKWW
Trigger: CCACCACTTAGACCACGCCCACCTCCTGACCGCGTT...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAAGAAGTTCTCCCAGCTaGCACCCAAACCAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRRSSPS*HPNQAG
Trigger: CCCAGCTTGGTTTGGGTGGCAGCTGGGAGAACTTCT...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGACGCACAGTGGGCATCTaGGGCCACCTCCCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGRTVGI*GHLPEG
Trigger: GCCTTCAGGGAGGTGGCCCCAGATGCCCACTGTGCG...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGACGGGGGCCTCCAGTCTaGTGCCTAAGGTCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGRGPPV*CLRSVN
Trigger: GTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCG...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCAATGTCAGGCGCAGCTaGGGGCCAACTTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VELNGGGQCLAANRPRKPNVRRS*GPTCVC
Trigger: ACACACACAAGTTGGCCCCCAGCTGCGCCTGACATT...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp CACCCCACGCTTGTGCAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAGTGTCCTTTTCATCCTaGGGCTTGTCCCAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: HPTLVQLSVNRGAQWRRSVSFSS*GLSQEA
Trigger: AGCCTCCTGGGACAAGCCTCAGGATGAAAAGGACAC...TGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAGCCTCGGTGGGGAGATaGGCACAGTGGGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKASVGR*AQWASG
Trigger: CCCAGATGCCCACTGTGCGCATCTCCCCACCGAGGC...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCCCAAGCTGGGTGTTATaGCAGGAGAGAGGAGACCTT +
Preference number: 2 (lower is better)
Translates to: VELNGGGQCLAANRPRKPPSWVL*QERGDL
Trigger: AAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGG...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp GAGCACAGTAGAGGGCAGCCTGGTTCTAGGTGGAGCTGTACCCTGAATTTGCTATCTAAGTGGTGGGCGTaGTCTAGGAGGTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: EHSRGQPGSRWSCTLNLLSKWWA*SRRCGH
Trigger: GTGGCCACACCTCCTAGACCACGCCCACCACTTAGA...TAGCAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTGCCCTCTACTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGGTTCTGGGTCCCAGCTaGTCCTCCCCGCCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMVLGPS*SSPPPH
Trigger: GTGGGGAGGCGGGGAGGAGCAGCTGGGACCCAGAAC...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp CAAGAGAGGGAGCACATCGTGGTATGTACTGAATGCCCAGCGCTAGCTTGCTTCTCTCTGCCTAACTCTTaGGGCTGCAGAGATGTGTCC +
Preference number: 2 (lower is better)
Translates to: QEREHIVVCTECPALACFSLPNS*GCRDVS
Trigger: GGACACATCTCTGCAGCCTCAAGAGTTAGGCAGAGA...GAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGACCACCAAGGAGCTGTaGACAAGCGGACTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVTTKEL*TSGLRK
Trigger: TTTCCTGAGTCCGCTTGTCCACAGCTCCTTGGTGGT...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CAA 90 bp TCTGGCATCAACATTTCTTCCAACCCCAGGAGAGGAAGGTGTAACTaGAGTCTCTGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: SGINISSNPRRGRCN*SLCLTLEAAEMCPP
Trigger: GGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCTCCTGGGGTTGGAAGAAATGTTGATGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp CACAAGGAGAAGACCCGCCCTGAGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTTTCTACTACTATACATaGCACGAAAACAGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: HKEKTRPELFCRIPPRLSFYYYT*HENSCN
Trigger: GTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAA...ACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp CACCCCACGCTTGTGCAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCATGTAACTTGAGTCTCTaGCTAACTCTTGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: HPTLVQLSVNRGAQWRRSCNLSL*LTLEAA
Trigger: TGCAGCCTCAAGAGTTAGGCAGAGACTCAAGTTACA...TGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp CAAGAGAGGGAGCACATCGTGGTATGTACTGAATGCCCAGCGCTAGCTTGCTTCCAATCCTCACCCCTCTaGCATCAACATTTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: QEREHIVVCTECPALACFQSSPL*HQHFFQ
Trigger: TTGGAAGAAATGTTGATGCCAGAGGGGTGAGGATTG...GAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR GCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGGGGCCTCCAGTCTGGTaGCTAAGGTCTGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMGPPVW*LRSVNK
Trigger: CTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCC...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR TCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGTTTCCTAGGACACAGTaGACCCAGCACCCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMFPRTQ*TQHPVG
Trigger: ACCTACTGGGTGCTGGGTTCACTGTGTCCTAGGAAA...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGGTATATACATGGGCATaGTGTACACAATATCTACAG +
Preference number: 2 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVVYTWA*CTQYLQ
Trigger: CTGTAGATATTGTGTACACCATGCCCATGTATATAC...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp GAATGTGCGGAGGCCAGCGCCCGGGGGCCTCCAGTCTaGTGCCTAAGGTCTGTGAACAAGACTGCTGCCGGG +
Preference number: 3 (lower is better)
Translates to: ECAEASARGPPV*CLRSVNKTAAG
Trigger: CCCGGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCCTCCGCACATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp GCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTaGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACAC +
Preference number: 3 (lower is better)
Translates to: AVRRWAWSKWWA*SRRCGHAPFRH
Trigger: GTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp AGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTaGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTC +
Preference number: 3 (lower is better)
Translates to: RNAVRRWAWSKW*AWSRRCGHAPF
Trigger: GAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp AGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTaGGTGAGAGCGGGCCACACACCGGTGCAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: SVHGDPWWRGCA*VRAGHTPVQPR
Trigger: CCTTGGCTGCACCGGTGTGTGGCCCGCTCTCACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp GAGAGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTaGTCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: ERRLRNAVRRWA*SKWWAWSRRCG
Trigger: GCCACACCTCCTAGACCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp CACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTaGGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGT +
Preference number: 3 (lower is better)
Translates to: HNCRAEGPRRGG*GTRSGGGRGLS
Trigger: ACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp TCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTaGCGGGGCCTCGGTGGGGAGATGCGCACAGTGGGC +
Preference number: 3 (lower is better)
Translates to: SSLVPKVCEQDC*RGLGGEMRTVG
Trigger: GCCCACTGTGCGCATCTCCCCACCGAGGCCCCGGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp GCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTaGTGCCGGGGCCTCGGTGGGGAGATGCGCACAGTG +
Preference number: 3 (lower is better)
Translates to: ASSLVPKVCEQD*CRGLGGEMRTV
Trigger: CACTGTGCGCATCTCCCCACCGAGGCCCCGGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp CCAAGGAGCTGTGGACAAGCGGACTCAGGAAAGCTGTaGGAAGGCAGACGAATGTGCGGAGGCCAGCGCCCG +
Preference number: 3 (lower is better)
Translates to: PRSCGQADSGKL*EGRRMCGGQRP
Trigger: CGGGCGCTGGCCTCCGCACATTCGTCTGCCTTCTCACAGCTTTCCTGAGTCCGCTTGTCCACAGCTCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp AGGTGTGGCCACGCCCCCTTCAGACACAGAGTCCACTaGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGT +
Preference number: 3 (lower is better)
Translates to: RCGHAPFRHRVH*LNVRRSWGPTC
Trigger: ACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGACTCTGTGTCTGAAGGGGGCGTGGCCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp ATAGCCCAATCCCGGGCACAAGGAGAAGACCCGCCCTaGGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: IAQSRAQGEDPP*AFLSDPSQAQF
Trigger: GAACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTGCCCGGGATTGGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp GTGGAGCTGTACCCTGAATTTGCTAGGGGACAAAGGTaGGGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTC +
Preference number: 3 (lower is better)
Translates to: VELYPEFARGQR*GLVLIVSPPSL
Trigger: GAGACTCGGAGGGGACACGATGAGCACCAGGCCCCACCTTTGTCCCCTAGCAAATTCAGGGTACAGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp TTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATaGAACCACCAAGGAGCTGTGGACAAGCGGACTCAG +
Preference number: 3 (lower is better)
Translates to: LRLQRCVLPQRR*NHQGAVDKRTQ
Trigger: CTGAGTCCGCTTGTCCACAGCTCCTTGGTGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp TTCTCCCAGCTGCCACCCAAACCAAGCTGGGTGTTATaGCAGGAGAGAGGAGACCTTTCTCATCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: FSQLPPKPSWVL*QERGDLSHLAF
Trigger: GAAGGCCAGATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCTGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp AACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTaGAAACAGGCCACGGAAACCCTGTTTGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: NRGAQWRRSMSS*KQATETLFGSR
Trigger: TCTGCTCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp TGCCCAGCGCTAGCTTGCTTCTGCCACCCACAGACTTaGTGTGTGACCTGGAGGAAGTTACTTACCCTCTCT +
Preference number: 3 (lower is better)
Translates to: CPALACFCHPQT*CVTWRKLLTLS
Trigger: AGAGAGGGTAAGTAACTTCCTCCAGGTCACACAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp CACATCGTGGTATGTACTGAATGCCCAGCGCTAGCTTaGTTCTGCCACCCACAGACTTGCTGTGTGACCTGG +
Preference number: 3 (lower is better)
Translates to: HIVVCTECPALA*FCHPQTCCVTW
Trigger: CCAGGTCACACAGCAAGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp TCCTCCCACAGAGGAGATGAAACCACCAAGGAGCTGTaGACAAGCGGACTCAGGAAAGCTGTGAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: SSHRGDETTKEL*TSGLRKAVRRQ
Trigger: CTGCCTTCTCACAGCTTTCCTGAGTCCGCTTGTCCACAGCTCCTTGGTGGTTTCATCTCCTCTGTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp CAAGCATCAAGAGAGGGAGCACATCGTGGTATGTACTaGATGCCCAGCGCTAGCTTGCTTCTGCCACCCACA +
Preference number: 3 (lower is better)
Translates to: QASREGAHRGMY*MPSASLLLPPT
Trigger: TGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTGATGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR GCA 72 bp CATCAAGAGAGGGAGCACATCGTGGTATGTACTGAATaGCCAGCGCTAGCTTGCTTCTGCCACCCACAGACT +
Preference number: 3 (lower is better)
Translates to: HQEREHIVVCTE*PALACFCHPQT
Trigger: AGTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp CTTTTCATCCTGAGGCTTGTCCCAGGAGGCTCCATATaGCGCAGCAATCCTCACCCCTCTGGCATCAACATT +
Preference number: 3 (lower is better)
Translates to: LFILRLVPGGSI*RSNPHPSGINI
Trigger: AATGTTGATGCCAGAGGGGTGAGGATTGCTGCGTCATATGGAGCCTCCTGGGACAAGCCTCAGGATGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp ACGCTTGTGCAATTGTCTGTAAACCGTGGAGCTCAATaGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACG +
Preference number: 3 (lower is better)
Translates to: TLVQLSVNRGAQ*RRSMSSCKQAT
Trigger: CGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR TCA 72 bp ATGGTGTACACAATATCTACAGGGACCCTCACAGACTaGTCTAGGGAGAGGGTTGAGGACAAGATGTCCCAA +
Preference number: 3 (lower is better)
Translates to: MVYTISTGTLTD*SRERVEDKMSQ
Trigger: TTGGGACATCTTGTCCTCAACCCTCTCCCTAGATCAGTCTGTGAGGGTCCCTGTAGATATTGTGTACACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CAA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGCCCACGCTTGTGCAATaGTCTGTAAACCGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMPTLVQ*SVNRGA
Trigger: AGCTCCACGGTTTACAGACAATTGCACAAGCGTGGG...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR-3UTR CAA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAAGAGGAAGGTGTAACTaGAGTCTCTGCCTAACTCTT +
Preference number: 3 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKRGRCN*SLCLTL
Trigger: AAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCT...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CCA 72 bp AAAATATACTTGTTAAGAGCTGATGACAAGGGCCTTTaGTTTATGGGTTCAAAACCCACCATGCCTGAGTAC +
Preference number: 3 (lower is better)
Translates to: KIYLLRADDKGL*FMGSKPTMPEY
Trigger: GTACTCAGGCATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAAGTATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGGATCCTCCCCTGCGCTaGTCGGGACGCCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWDPPLR*SGRRAG
Trigger: CCCAGCCCGGCGTCCCGAGCAGCGCAGGGGAGGATC...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTGCCCTCTGCCCGCGGCTCTaGAGCTCTCCCAGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: SARGPPVWCLRSVNKTAALCPRL*SSPSAG
Trigger: TCCGGCGCTGGGAGAGCTGCAGAGCCGCGGGCAGAG...GGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCGCCACCTTCTCCGCCTaGCCCAAAGGGGGTCGCTCG +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCATFSA*PKGGRS
Trigger: CGAGCGACCCCCTTTGGGGCAGGCGGAGAAGGTGGC...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCACTGCGGGGAGCTGCCTaGTGCTCCAGCCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSLRGAA*CSSRRA
Trigger: GGCTCGGCGGCTGGAGCAGCAGGCAGCTCCCCGCAG...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGGGGGCAGGTGCCCCATaGGTGGGCTCCGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKGAGAP*VGSEGS
Trigger: CGAGCCCTCGGAGCCCACCCATGGGGCACCTGCCCC...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCGCTCAGAGAGCTGCCTaGAAGCGCCGGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCAQRAA*KRRELR
Trigger: CCGCAGCTCCCGGCGCTTCCAGGCAGCTCTCTGAGC...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGCTCGGGGCTGGGAATaGCGGGCCGGGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGARGWE*RAGPLA
Trigger: TGCCAGAGGCCCGGCCCGCCATTCCCAGCCCCGAGC...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCACTGGGGCCACCTCCCTaGAGGCACTGGCCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSLGPPP*RHWPSP
Trigger: GGGGCTTGGCCAGTGCCTTCAGGGAGGTGGCCCCAG...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCAGGCGTCCATCTCCTTaGCGCGGCGCATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCRRPSP*RGACRR
Trigger: CCTTCTGCATGCGCCGCGTCAAGGAGATGGACGCCT...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTCGGGGAGCTGCCTGCTaGTCCAGCCGCCGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEARGAAC*SSRRAS
Trigger: GGAGGCTCGGCGGCTGGAGCAGCAGGCAGCTCCCCG...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGGCCTCGGTGGGGAGATaGGCACAGTGGGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGASVGR*AQWASG
Trigger: CCCAGATGCCCACTGTGCGCATCTCCCCACCGAGGC...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CACAAGGAGAAGACCCGCCCTGAGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTCAGGTGCCCCATGGGTaGGCTCCGAGGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: HKEKTRPELFCRIPPRLSQVPHG*APRARR
Trigger: CCGCCGAGCCCTCGGAGCCCACCCATGGGGCACCTG...ACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCGCATGCAGAAGGGCCTaGGGTGGAAGGCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCACRRA*GGRRHR
Trigger: ACGGTGACGCCTTCCACCCCAGGCCCTTCTGCATGC...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCGCCGTGGATCTGAACTaGGTGAGGGCCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCAVDLN*VRAWPR
Trigger: CCTTGGCCAGGCCCTCACCCAGTTCAGATCCACGGC...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCCCAGGAGGCTCCATATaGCGCAGCAATCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCPGGSI*RSNPHP
Trigger: GGGGTGAGGATTGCTGCGTCATATGGAGCCTCCTGG...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCAAAGGTGGGGCCTGGTaGTCATCGTGTCCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCKGGAW*SSCPLR
Trigger: TCGGAGGGGACACGATGAGCACCAGGCCCCACCTTT...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGGTGCAGGTGCAGGTATaGAGAGCTGGGGCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWVQVQV*RAGAGA
Trigger: TGCTCCAGCCCCAGCTCTGCATACCTGCACCTGCAC...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCAGCCTCCCAGAGTCTGTaGTGGCTCCCGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSASQSL*WLPGHC
Trigger: GCAGTGACCCGGGAGCCACCACAGACTCTGGGAGGC...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGCGGCACAGCTCGCCGTaGTCGTTCTTGTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWRHSSP*SFLLPQ
Trigger: CTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCG...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTGCCTCCCTCTCACGGGCCTaGCCTTCCCGAAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: SARGPPVWCLRSVNKTAASLSRA*PSRRTL
Trigger: CAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGA...GGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGCGGGGGCCTCCAGTCTaGTGCCTAAGGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWRGPPV*CLRSVN
Trigger: GTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCG...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGCCGGGGGCCTCCTGCTaGGCCAGGTGCCCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVPGASC*ARCPEA
Trigger: AGCCTCCGGGCACCTGGCTCAGCAGGAGGCCCCCGG...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGGTCTGTGAACAAGACTaGTGCCGGGGCCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKVCEQD*CRGLGG
Trigger: CCCACCGAGGCCCCGGCAGCAGTCTTGTTCACAGAC...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCCAGGGTTGGAGCTGCTaGTTTGAGCACAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCQGWSC*FEHRRR
Trigger: CCTGCGTCTGTGCTCAAAGCAGCAGCTCCAACCCTG...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGCGGGCCACACACCGGTaGAGCCAAGGTACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGRATHR*SQGTWS
Trigger: AGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCG...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGATGGACAGCCTGCGCATaGCGGGGAAGGGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRWTACA*RGRGGC
Trigger: GCAACCACCCCTTCCCCGCCATGCGCAGGCTGTCCA...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGGCTAGGGGACAAAGGTaGGGCCTGGTGCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGARGQR*GLVLIV
Trigger: CACGATGAGCACCAGGCCCCACCTTTGTCCCCTAGC...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCGGCGACGCCAGCAGCTaGAGGAGGAGCAGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SCHPNQAGCYARREETFLGDASS*RRSRAL
Trigger: GAGCGCCCTGCTCCTCCTTCAGCTGCTGGCGTCGCC...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATGGAGCTGCGGGGAGCTaGCTGCTGCTCCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHGAAGS*LLLQPP
Trigger: CGGCGGCTGGAGCAGCAGGCAGCTCCCCGCAGCTCC...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATGGCGGGCCGGGCCTCTaGCACGGCTCAGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHGGPGL*HGSESC
Trigger: GCAGCTCTCTGAGCCGTGCCAGAGGCCCGGCCCGCC...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCTCGGTGGTGGGCACCTaGCGGCACAGCTCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SCHPNQAGCYARREETFLSVVGT*RHSSPW
Trigger: CCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGA...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCAAACGCGGTCAGGAGGTaGGCGTGGTCTAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSNAVRR*AWSKWW
Trigger: CCACCACTTAGACCACGCCCACCTCCTGACCGCGTT...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTTTTTGGCGGGCACACTaGGCGTGCAGTTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEAFWRAH*ACSSRW
Trigger: CCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAA...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGCCTAGGAGAGGAGGCTaGGGAACGCGGTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMPRRGG*GTRSGG
Trigger: ACCTCCTGACCGCGTTCCTCAGCCTCCTCTCCTAGG...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGTTTCCTAGGACACAGTaGACCCAGCACCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWFPRTQ*TQHPVG
Trigger: ACCTACTGGGTGCTGGGTTCACTGTGTCCTAGGAAA...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAGGAGAAGACCCGCCCTaGGCTTTTCTGTCGGATCCC +
Preference number: 4 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRGEDPP*AFLSDP
Trigger: GGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCC...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCCGCGGCCTCCTTCTCTaGCCGCGGCTCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SCHPNQAGCYARREETFLRGLLL*PRLCSS
Trigger: AGAGCTGCAGAGCCGCGGGCAGAGAAGGAGGCCGCG...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGTGGCTCCCGGGTCACTaGGCGGGGATCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVWLPGH*AGILPC
Trigger: GCAGGGGAGGATCCCCGCGCAGTGACCCGGGAGCCA...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTTGTGAACAAGACTGCTaGCGGGGCCTCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEACEQDC*RGLGGE
Trigger: CTCCCCACCGAGGCCCCGGCAGCAGTCTTGTTCACA...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTGGGCCAAGGCTGGGGTaGAGGTGCAGGTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEAGPRLG*RCRYAE
Trigger: CTCTGCATACCTGCACCTGCACCCCAGCCTTGGCCC...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CACCCCACGCTTGTGCAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAGGTGCGTGTCCCAGGTaGGCGAACCCTCCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: HPTLVQLSVNRGAQWRRSGACPR*ANPPGR
Trigger: GCGACCAGGAGGGTTCGCCCACCTGGGACACGCACC...TGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATGCAGCTCGGCCTCGGTaGTGGGCACCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHAARPR*WAPGGT
Trigger: TGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGC...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGGCATCCCTCGCTCACTaGATGGTGCACTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKASLAH*MVHLSL
Trigger: GAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGC...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGCTGCCGGGGCCTCGGTaGGGAGATGCGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVLPGPR*GDAHSG
Trigger: CCCACTGTGCGCATCTCCCCACCGAGGCCCCGGCAG...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGAGACACAGAGTCCACTaGCTCAATGTCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGRHRVH*LNVRRS
Trigger: GCTGCGCCTGACATTGAGCCAGTGGACTCTGTGTCT...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAGGCAGAGGCCAGGACTaGGGACCCTCTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRGRGQD*GPSWFP
Trigger: AGGAAACCAAGAGGGTCCCCAGTCCTGGCCTCTGCC...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCACACCACCATGCGGTATaGGTTTTTGGCGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSHHHAV*VFGGHT
Trigger: AGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTG...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGTCCAGGATCTGCTTCTaGAGGCGCTTGACCTCATCG +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGSRICF*RRLTSS
Trigger: CGATGAGGTCAAGCGCCTTCAGAAGCAGATCCTGGA...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGGCAGCTTGGCCATGCTaGAGAGCACGTAGAACATCT +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGAAWPC*RARRTS
Trigger: AGATGTTCTACGTGCTCTTCAGCATGGCCAAGCTGC...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTGCCCATCGTGGTATGTACTaGATGCCCAGCGCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SARGPPVWCLRSVNKTAAHRGMY*MPSASL
Trigger: CAAGCTAGCGCTGGGCATTCAGTACATACCACGATG...GGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGGCCTCCAGTCTGGTaGCTAAGGTCTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGGPPVW*LRSVNK
Trigger: CTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCC...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGCCAAGCTGGGTGTTATaGCAGGAGAGAGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGPSWVL*QERGDL
Trigger: AAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGG...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGCCAAGGTACCTGGTCTaGTCAGAAGGCTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGPRYLV*SEGSGS
Trigger: ACTGCCTGAGCCTTCTGAGCAGACCAGGTACCTTGG...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TCCAACCCCAGGAGAGGAAGGTGTAACTTGAGTCTCTGCCTAACTCTTGAGGCTGCTCGGCCTCGGTGGTaGGCACCTGGCGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SNPRRGRCNLSLCLTLEAARPRW*APGGTA
Trigger: AGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGC...AGCCTCAAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCTCCTGGGGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTGCCCCACCCAAACCAAGCTaGGTGTTATGCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SARGPPVWCLRSVNKTAAPPKPS*VLCQER
Trigger: TCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGG...GGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGAACCGTGGAGCTCAATaGCGGAGGTCAATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGNRGAQ*RRSMSS
Trigger: GCTAGACATTGACCTCCGCCATTGAGCTCCACGGTT...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCCACGGAGATCCATGGTaGCGGGGCTGTGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SCHPNQAGCYARREETFLHGDPW*RGCAWV
Trigger: CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTG...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGTCTTCAGGCAGGACTTaGCCTCCAGGATCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGSSGRT*PPGSAS
Trigger: AGAAGCAGATCCTGGAGGTCAAGTCCTGCCTGAAGA...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGTCGCTCACTGGATGGTaGACTTGTCCCTCTCACGGG +
Preference number: 4 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMSLTGW*TCPSHG
Trigger: CCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGA...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCAAAGCAGTCCTGGCCTaGCCACCCCACGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VELNGGGQCLAANRPRKPKAVLA*PPHACA
Trigger: TGCACAAGCGTGGGGTGGGCAGGCCAGGACTGCTTT...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGGGGTGGTATGTACTGAATaGCCAGCGCTAGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLAQCQAQLGANLCVCWGVVCTE*PALACF
Trigger: GAAGCAAGCTAGCGCTGGGCATTCAGTACATACCAC...CCCCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTAGGCAGGGTTGGAGCTaGTGCTTTGAGCACAGACGC +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEARQGWS*CFEHRR
Trigger: GCGTCTGTGCTCAAAGCAGCAGCTCCAACCCTGCCT...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGGCGTGCAGTTCCCGCTaGACAAAGTCTTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKACSSR*TKSSSW
Trigger: CCATGATGAAGACTTTGTCCAGCGGGAACTGCACGC...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCGACAAAGGTGGGGCCTaGTGCTCATCGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VELNGGGQCLAANRPRKPDKGGA*CSSCPL
Trigger: GAGGGGACACGATGAGCACCAGGCCCCACCTTTGTC...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATGAAACCATGGCGGGGCTGTGCCTaGGTGAGAGCGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: CLTLEAAEMCPPTEEMKPWRGCA*VRAGHT
Trigger: TGTGTGGCCCGCTCTCACCCAGGCACAGCCCCGCCA...TGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp GAGCACAGTAGAGGGCAGCCTGGTTCTAGGTGGAGCTGTACCCTGAATTTGCTAGGGGTCCTTTGGAGGTaGCTGTGGGTGCGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EHSRGQPGSRWSCTLNLLGVLWR*LWVRVP
Trigger: TGGGACACGCACCCACAGTCACCTCCAAAGGACCCC...TAGCAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTGCCCTCTACTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGAAAAACCCACCATGCCTaGGTACATGGTGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRKTHHA*VHGGTQ
Trigger: CTGGGTACCACCATGTACTCAGGCATGGTGGGTTTT...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAGGAAGCGCCGGGAGCTaGGGGGAGCTGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKGSAGS*GELPAA
Trigger: AGCAGCAGGCAGCTCCCCGCAGCTCCCGGCGCTTCC...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTAAGGCGTCACCGTACTaGACGGAGATCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEAKASPY*TEILRC
Trigger: GCATCGCAAGATCTCCGTGCAGTACGGTGACGCCTT...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CAAGAGAGGGAGCACATCGTGGTATGTACTGAATGCCCAGCGCTAGCTTGCTTCCAGAAGGGCCTGGGGTaGAAGGCGTCACCGTACTGC +
Preference number: 4 (lower is better)
Translates to: QEREHIVVCTECPALACFQKGLG*KASPYC
Trigger: GCAGTACGGTGACGCCTTCCACCCCAGGCCCTTCTG...GAAGCAAGCTAGCGCTGGGCATTCAGTACATACCACGATGTGCTCCCTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATGAAACCAGGGAGATGCGCACAGTaGGCATCTGGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CLTLEAAEMCPPTEEMKPGRCAQ*ASGATS
Trigger: GGAGGTGGCCCCAGATGCCCACTGTGCGCATCTCCC...TGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
3UTR CAA 72 bp AAGCAGTCCTGGCCTGCCCACCCCACGCTTGTGCAATaGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KQSWPAHPTLVQ*SVNRGAQWRRS
Trigger: TGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTGCACAAGCGTGGGGTGGGCAGGCCAGGACTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAACACGATGGAGCTCTTaGCCACCCGAGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGTRWSS*PPERHP
Trigger: TGGGTGCCTCTCGGGTGGGCAAGAGCTCCATCGTGT...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGACTGCACGGAGATCTTaGGATGCAGGGCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVTARRS*DAGRGS
Trigger: TGAGCCCCGCCCTGCATCGCAAGATCTCCGTGCAGT...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAGCTCCGCCGCCTCCTTaGTCTTGTTCTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGAPPPP*SCSSGR
Trigger: CCTGCCTGAAGAACAAGACCAAGGAGGCGGCGGAGC...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CACAAGGAGAAGACCCGCCCTGAGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTACCACCAAGGAGCTGTaGACAAGCGGACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HKEKTRPELFCRIPPRLSTTKEL*TSGLRK
Trigger: TTTCCTGAGTCCGCTTGTCCACAGCTCCTTGGTGGT...ACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CACAAGGAGAAGACCCGCCCTGAGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTATGCAGAGCTGGGGCTaGAGCATGTGTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: HKEKTRPELFCRIPPRLSMQSWG*SMCTSV
Trigger: CACAGATGTACACATGCTCCAGCCCCAGCTCTGCAT...ACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCCTCAAAGCGGCCATTaGGGAAGCGAGACACGATGG +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHPQSGH*GSETRW
Trigger: CCATCGTGTCTCGCTTCCTCAATGGCCGCTTTGAGG...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAGGGACCCTCACAGACTaGTCTAGGGAGAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGGTLTD*SRERVE
Trigger: CTCAACCCTCTCCCTAGATCAGTCTGTGAGGGTCCC...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACCTCCTGGTCGCCTATaGCACCTTCTCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKPPGRL*HLLRLP
Trigger: GGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGG...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACACGGCTCAGAGAGCTaGCTGGAAGCGCCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKHGSES*LEAPGA
Trigger: AGCTCCCGGCGCTTCCAGGCAGCTCTCTGAGCCGTG...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGTGTAACTTGAGTCTCTaGCTAACTCTTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKCNLSL*LTLEAA
Trigger: TGCAGCCTCAAGAGTTAGGCAGAGACTCAAGTTACA...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTAGGTCAATGTCTAGCTaGAAACAGGCCACGGAAACC +
Preference number: 4 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEARSMSS*KQATET
Trigger: GGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCT...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TCCAACCCCAGGAGAGGAAGGTGTAACTTGAGTCTCTGCCTAACTCTTGAGGCTGTGGGCGAACCCTCCTaGTCGCCTATGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SNPRRGRCNLSLCLTLEAVGEPS*SPMPPS
Trigger: AGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCAC...AGCCTCAAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCTCCTGGGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAATCCCAGAGTCTGTGGTaGCTCCCGGGTCACTGCGCG +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKSQSLW*LPGHCA
Trigger: CGCGCAGTGACCCGGGAGCCACCACAGACTCTGGGA...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGACCCTCGCTCACTGGATaGTGCACTTGTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGPSLTG*CTCPSH
Trigger: GTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGG...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGATTGTCTGTAAACCGTaGAGCTCAATGGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMIVCKP*SSMAEV
Trigger: GACCTCCGCCATTGAGCTCCACGGTTTACAGACAAT...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGCAGCCTGGTTCTAGGTaGAGCTGTACCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMQPGSR*SCTLNL
Trigger: CAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTG...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAGGACAGAGGCAGGGTTaGAGCTGCTGCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGGQRQG*SCCFEH
Trigger: GTGCTCAAAGCAGCAGCTCCAACCCTGCCTCTGTCC...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAGTGTCCTTTTCATCCTaGGGCTTGTCCCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGVSFSS*GLSQEA
Trigger: AGCCTCCTGGGACAAGCCTCAGGATGAAAAGGACAC...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCACCCAGCACCACCATaGGGTATGAGTTTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHHPAPP*GMSFWR
Trigger: CCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTG...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp TGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATGAAACCACGAAGGGCGAGACCATaGCATAGGCGTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: CLTLEAAEMCPPTEEMKPRRARP*HRRPSP
Trigger: AGGAGATGGACGCCTATGGCATGGTCTCGCCCTTCG...TGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp GAGCACAGTAGAGGGCAGCCTGGTTCTAGGTGGAGCTGTACCCTGAATTTGCTAAGAAGTTCTCCCAGCTaGCACCCAAACCAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EHSRGQPGSRWSCTLNLLRSSPS*HPNQAG
Trigger: CCCAGCTTGGTTTGGGTGGCAGCTGGGAGAACTTCT...TAGCAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTGCCCTCTACTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGATCATGGCTCGGGGCTaGGAATGGCGGGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMIMARG*EWRAGP
Trigger: AGGCCCGGCCCGCCATTCCCAGCCCCGAGCCATGAT...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATGAAACCATCTAAGTGGTGGGCGTaGTCTAGGAGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CLTLEAAEMCPPTEEMKPSKWWA*SRRCGH
Trigger: GTGGCCACACCTCCTAGACCACGCCCACCACTTAGA...TGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAGTACACGGAGATCCATaGTGGCGGGGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKVHGDP*WRGCAW
Trigger: CCAGGCACAGCCCCGCCACCATGGATCTCCGTGTAC...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAATCTTGTTGCCACAGATaGCCATGGGCAGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKSCCHR*PWAAPP
Trigger: CGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGA...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCCAGAGCGTAAGAGTTaGAGGGCTGGGAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHPERKS*RAGREV
Trigger: AACTTCTCTCCCAGCCCTGCAACTCTTACGCTCTGG...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAACAAAGTCTTCATCATaGCTCGGGGCTGGGAATGGC +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGTKSSS*LGAGNG
Trigger: GCCATTCCCAGCCCCGAGCCATGATGAAGACTTTGT...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATATGGTGGGTGTGTACTaGTCCTCAAAGCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHMVGVY*SSKRPL
Trigger: CAATGGCCGCTTTGAGGACCAGTACACACCCACCAT...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TCCAACCCCAGGAGAGGAAGGTGTAACTTGAGTCTCTGCCTAACTCTTGAGGCTGCAGGTATGCAGAGCTaGGGCTGGAGCATGTGTACA +
Preference number: 4 (lower is better)
Translates to: SNPRRGRCNLSLCLTLEAAGMQS*GWSMCT
Trigger: TGTACACATGCTCCAGCCCCAGCTCTGCATACCTGC...AGCCTCAAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCTCCTGGGGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATAGAGGGAGCACATCGTaGTATGTACTGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHRGSTS*YVLNAQ
Trigger: CTGGGCATTCAGTACATACCACGATGTGCTCCCTCT...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGACACAGACTTGCTGTGTaGCCTGGAGGAAGTTACTTA +
Preference number: 4 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGHRLAV*PGGSYL
Trigger: TAAGTAACTTCCTCCAGGTCACACAGCAAGTCTGTG...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp ATGATTTCCATTTCTACTACTATACATGACACGAAAACAGCTGCAACCACAACAAGGGGGTCGCTCGGATaGGGGGTATCGGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: MISISTTIHDTKTAATTTRGSLG*GVSGCR
Trigger: CCGGCAGCCCGATACCCCCCATCCGAGCGACCCCCT...TGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAAATGTCAGGCGCAGCTaGGGGCCAACTTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKNVRRS*GPTCVC
Trigger: ACACACACAAGTTGGCCCCCAGCTGCGCCTGACATT...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATAGGGCCTTTGGTTTATaGGTTCAAAACCCACCATGC +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHRAFGL*VQNPPC
Trigger: GCATGGTGGGTTTTGAACCCATAAACCAAAGGCCCT...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGGCTTCTGAAGGCGCTTaGCCTCATCGAAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMASEGA*PHRRTP
Trigger: GGGAGTCCTTCGATGAGGTCAAGCGCCTTCAGAAGC...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCTGCTTAATAAATGCTTaGGGAACGAGCACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SCHPNQAGCYARREETFLCLINA*GTSTVE
Trigger: CTCTACTGTGCTCGTTCCTCAAGCATTTATTAAGCA...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATCAATCCTCACCCCTCTaGCATCAACATTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHQSSPL*HQHFFQ
Trigger: TTGGAAGAAATGTTGATGCCAGAGGGGTGAGGATTG...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp TTGTTAAGAGCTGATGACAAGGGCCTTTGGTTTATGGGTTCAAAACCCACCATGAACTGGGTGAGGGCCTaGCCAAGGAGGGAGTCACTA +
Preference number: 4 (lower is better)
Translates to: LLRADDKGLWFMGSKPTMNWVRA*PRRESL
Trigger: TAGTGACTCCCTCCTTGGCCAGGCCCTCACCCAGTT...CATGGTGGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATCAGCTCTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp CTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCATGATGACAAGGGCCTTTaGTTTATGGGTTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: LPPKPSWVLCQERGDLSHDDKGL*FMGSKP
Trigger: GGGTTTTGAACCCATAAACCAAAGGCCCTTGTCATC...ATGAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp ATGATTTCCATTTCTACTACTATACATGACACGAAAACAGCTGCAACCACAACAGTCAGGAGGTGGGCGTaGTCTAAGTGGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: MISISTTIHDTKTAATTTVRRWA*SKWWAW
Trigger: CCACGCCCACCACTTAGACCACGCCCACCTCCTGAC...TGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp TGCCTAACTCTTGAGGCTGCAGAGATGTGTCCTCCCACAGAGGAGATGAAACCATTCTACTACTATACATaGCACGAAAACAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: CLTLEAAEMCPPTEEMKPFYYYT*HENSCN
Trigger: GTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAA...TGGTTTCATCTCCTCTGTGGGAGGACACATCTCTGCAGCCTCAAGAGTTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR GCA 90 bp ATGATTTCCATTTCTACTACTATACATGACACGAAAACAGCTGCAACCACAACAACGGAGATCTTGCGATaGAGGGCGGGGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: MISISTTIHDTKTAATTTTEILR*RAGLIS
Trigger: CGAGATGAGCCCCGCCCTGCATCGCAAGATCTCCGT...TGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CCA 90 bp ATGATTTCCATTTCTACTACTATACATGACACGAAAACAGCTGCAACCACAACAGCGTGGTCTAAGTGGTaGGCGTGGTCTAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: MISISTTIHDTKTAATTTAWSKW*AWSRRC
Trigger: ACACCTCCTAGACCACGCCCACCACTTAGACCACGC...TGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR TCA 90 bp ATGATTTCCATTTCTACTACTATACATGACACGAAAACAGCTGCAACCACAACATCTCTGCCTAACTCTTaGGGCTGCAGAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: MISISTTIHDTKTAATTTSLPNS*GCRDVS
Trigger: GGACACATCTCTGCAGCCTCAAGAGTTAGGCAGAGA...TGTTGTGGTTGCAGCTGTTTTCGTGTCATGTATAGTAGTAGAAATGGAAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 90 bp TCCAGCCGCCGAGCCTCCCAGAGTCTGTGGTGGCTCCCGGGTCACTaGGCGGGGATCCTCCCCTGCGCTGCTCGGGACGCCGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSRRASQSLWWLPGH*AGILPCAARDAGLG
Trigger: GCCCAGCCCGGCGTCCCGAGCAGCGCAGGGGAGGATCCCCGCGCAGTGACCCGGGAGCCACCACAGACTCTGGGAGGCTCGGCGGCTGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp GGAGCTGCCTGCTGCTCCAGCCGCCGAGCCTCCCAGAGTCTGTGGTaGCTCCCGGGTCACTGCGCGGGGATCCTCCCCTGCGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: GAACCSSRRASQSLW*LPGHCAGILPCAAR
Trigger: CCGAGCAGCGCAGGGGAGGATCCCCGCGCAGTGACCCGGGAGCCACCACAGACTCTGGGAGGCTCGGCGGCTGGAGCAGCAGGCAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 90 bp GGCGGCGGGCGAAGGGCGAGACCATGCCATAGGCGTCCATCTCCTTaGCGCGGCGCATGCAGAAGGGCCTGGGGTGGAAGGCGTCACCGT +
Preference number: 5 (lower is better)
Translates to: GGGRRARPCHRRPSP*RGACRRAWGGRRHR
Trigger: ACGGTGACGCCTTCCACCCCAGGCCCTTCTGCATGCGCCGCGTCAAGGAGATGGACGCCTATGGCATGGTCTCGCCCTTCGCCCGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 90 bp ACTGTGGGTGCGTGTCCCAGGTGGGCGAACCCTCCTGGTCGCCTATaGCACCTTCTCCGCCTGCCCCAAAGGGGGTCGCTCGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: TVGACPRWANPPGRL*HLLRLPQRGSLGWG
Trigger: CCCCCATCCGAGCGACCCCCTTTGGGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGCACCCACAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp AGCAGCTCGGCCTCGGTGGTGGGCACCTGGCGGCACAGCTCGCCGTaGTCGTTCTTGTTGCCACAGATGACCATGGGCAGCTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSSASVVGTWRHSSP*SFLLPQMTMGSSAA
Trigger: GGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp AGGCGCAGTTCTCGTCGCCCGACACCAGCAGCTCGGCCTCGGTGGTaGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTTGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: RRSSRRPTPAARPRW*APGGTARRGRSCCH
Trigger: GTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACGAGAACTGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 90 bp GGCACTGGCCAAGCCCCGCCCCAGCATCCCTCGCTCACTGGATGGTaGACTTGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: GTGQAPPQHPSLTGW*TCPSHGPGLPEGPW
Trigger: CCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGGGCTTGGCCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp AGTAGGCGCAGTTCTCGTCGCCCGACACCAGCAGCTCGGCCTCGGTaGTGGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTTGTTGC +
Preference number: 5 (lower is better)
Translates to: SRRSSRRPTPAARPR*WAPGGTARRGRSCC
Trigger: GCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACGAGAACTGCGCCTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCACAGGTGCCCGGAGGCTaGGGGACGTCCGATCCGGGG +
Preference number: 5 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSQVPGG*GTSDPG
Trigger: CCCCGGATCGGACGTCCCCAAGCCTCCGGGCACCTG...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp TTCTCGTCGCCCGACACCAGCAGCTCGGCCTCGGTGGTGGGCACCTaGCGGCACAGCTCGCCGTGGTCGTTCTTGTTGCCACAGATGACC +
Preference number: 5 (lower is better)
Translates to: FSSPDTSSSASVVGT*RHSSPWSFLLPQMT
Trigger: GGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp GAAGGCACTGGCCAAGCCCCGCCCCAGCATCCCTCGCTCACTGGATaGTGCACTTGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCT +
Preference number: 5 (lower is better)
Translates to: EGTGQAPPQHPSLTG*CTCPSHGPGLPEGP
Trigger: AGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGGGCTTGGCCAGTGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp TTTGGAGGTGACTGTGGGTGCGTGTCCCAGGTGGGCGAACCCTCCTaGTCGCCTATGCCACCTTCTCCGCCTGCCCCAAAGGGGGTCGCT +
Preference number: 5 (lower is better)
Translates to: FGGDCGCVSQVGEPS*SPMPPSPPAPKGVA
Trigger: AGCGACCCCCTTTGGGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGCACCCACAGTCACCTCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGCAGCTGGGGGCCAACTaGTGTGTGTGCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKQLGAN*CVCWGW
Trigger: CCACCCCCAGCACACACACAAGTTGGCCCCCAGCTG...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGGAGGCTGAGGAACGCGGTCAGGAGGTGGGCGTGGTCTAAGTGGTGGGCGTGGGTTGGAGCTGCTGCTTaGAGCACAGACGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RRLRNAVRRWAWSKWWAWVGAAA*STDAGR
Trigger: CCTGCCTGCGTCTGTGCTCAAAGCAGCAGCTCCAAC...CCACGCCCACCACTTAGACCACGCCCACCTCCTGACCGCGTTCCTCAGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 90 bp GCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTTGTTGCCACAGATaGCCATGGGCAGCTCCGCCGCCTCCTTGGTCTTGTTCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: APGGTARRGRSCCHR*PWAAPPPPWSCSSG
Trigger: GCCTGAAGAACAAGACCAAGGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GGGAGAGGGTTGAGGACAAGATGTCCCAAAGCCCTGAAGGCCCCAGGGGCCAAGCACTGGATGGTGCACTaGTCCCTCTCACGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGLRTRCPKALKAPGAKHWMVH*SLSRAW
Trigger: CCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTG...CTTGGCCCCTGGGGCCTTCAGGGCTTTGGGACATCTTGTCCTCAACCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 90 bp GGAGCTCTTGCCCACCCGAGAGGCACCCAGCACCACCATGCGGTATaGGTTTTTGGCGGGCACACTGAGCGTGCAGTTCCCGCTGGACAA +
Preference number: 5 (lower is better)
Translates to: GALAHPRGTQHHHAV*VFGGHTERAVPAGQ
Trigger: TTGTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTGCCTCTCGGGTGGGCAAGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GGCCAGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTCGCCGTGGTCGTTCTaGTTGCCACAGATGACCATG +
Preference number: 5 (lower is better)
Translates to: GQRPGASSLVPKVCEQDCSPWSF*LPQMTM
Trigger: CATGGTCATCTGTGGCAACAAGAACGACCACGGCGA...GCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCAATCTCGTGTGGCAGCTaGGCCATGCTGAAGAGCACG +
Preference number: 5 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSISCGS*AMLKST
Trigger: CGTGCTCTTCAGCATGGCCAAGCTGCCACACGAGAT...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTACTTGAGGTCACTGTaGACGCTGGGGCGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: VELNGGGQCLAANRPRKPYLRSL*TLGRRA
Trigger: CGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTA...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 90 bp GCATCCCTCGCTCACTGGATGGTGCACTTGTCCCTCTCACGGGCCTaGCCTTCCCGAAGGACCTTGGCCTTGATGTACTTGAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: ASLAHWMVHLSLSRA*PSRRTLALMYLRSL
Trigger: CAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGAGCGGGCCACACACCGGTGCAGCCAAGGTACCTGGTCTGCTCAGAAGGCTCAATGCGGTATGAGTTTTaGGCGGGCACACTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: RAGHTPVQPRYLVCSEGSMRYEF*AGTLSV
Trigger: CACGCTCAGTGTGCCCGCCAAAAACTCATACCGCAT...TGAGCCTTCTGAGCAGACCAGGTACCTTGGCTGCACCGGTGTGTGGCCCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGCGCCCGGGGGCCTCCAGTCTGGTGCCTAAGGTCTGTGAACAAGACTGCTGCCAGCTGTACCCTGAATTaGCTAGGGGACAAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SARGPPVWCLRSVNKTAASCTLN*LGDKGG
Trigger: CCCACCTTTGTCCCCTAGCAAATTCAGGGTACAGCT...GGCAGCAGTCTTGTTCACAGACCTTAGGCACCAGACTGGAGGCCCCCGGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GGCCTGGTGCTCATCGTGTCCCCTCCGAGTCTCGGTGGTATCCTCTGTGAAATGATGCCCAGCGCTAGCTaGCTTCTGCCACCCACAGAC +
Preference number: 5 (lower is better)
Translates to: GLVLIVSPPSLGGILCEMMPSAS*LLPPTD
Trigger: GTCTGTGGGTGGCAGAAGCAAGCTAGCGCTGGGCAT...CATTTCACAGAGGATACCACCGAGACTCGGAGGGGACACGATGAGCACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 90 bp AGGCACCCAGCACCACCATGCGGTATGAGTTTTTGGCGGGCACACTaGGCGTGCAGTTCCCGCTGGACAAAGTCTTCATCATGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: RHPAPPCGMSFWRAH*ACSSRWTKSSSWLG
Trigger: CCCGAGCCATGATGAAGACTTTGTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCGCGGGGAAGGGGTGGTaGCCAGAGGTATCCAGGATG +
Preference number: 5 (lower is better)
Translates to: SCHPNQAGCYARREETFLAGKGW*PEVSRM
Trigger: CATCCTGGATACCTCTGGCAACCACCCCTTCCCCGC...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp CTGCAACCACAACAAAGCACAACTGTCGGGCGGAGGGACCTAGGAGAGGAGGCTCCGTGGTCGTTCTTGTaGCCACAGATGACCATGGGC +
Preference number: 5 (lower is better)
Translates to: LQPQQSTTVGRRDLGEEAPWSFL*PQMTMG
Trigger: GCCCATGGTCATCTGTGGCAACAAGAACGACCACGG...AGCCTCCTCTCCTAGGTCCCTCCGCCCGACAGTTGTGCTTTGTTGTGGTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GTCCACTGGCTCAATGTCAGGCGCAGCTGGGGGCCAACTTGTGTGTGTGCTGGGCGAAGGACCTTGGCCTaGATGTACTTGAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: VHWLNVRRSWGPTCVCAGRRTLA*MYLRSL
Trigger: CAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCG...CCCAGCACACACACAAGTTGGCCCCCAGCTGCGCCTGACATTGAGCCAGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp ACTTTTATTGATAGTGTACACGGAGATCCATGGTGGCGGGGCTGTGCCTGGGTGTACTGCACGGAGATCTaGCGATGCAGGGCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TFIDSVHGDPWWRGCAWVYCTEI*RCRAGL
Trigger: GAGCCCCGCCCTGCATCGCAAGATCTCCGTGCAGTA...CACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAATAAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTCCTCAAAGCGGCCATaGAGGAAGCGAGACACGATG +
Preference number: 5 (lower is better)
Translates to: VELNGGGQCLAANRPRKPSSKRP*RKRDTM
Trigger: CATCGTGTCTCGCTTCCTCAATGGCCGCTTTGAGGA...GGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp TCTAAGTGGTGGGCGTGGTCTAGGAGGTGTGGCCACGCCCCCTTCAGACACAGATTGGCCTTGATGTACTaGAGGTCACTGTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: SKWWAWSRRCGHAPFRHRLALMY*RSLLTL
Trigger: CAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAA...TCTGTGTCTGAAGGGGGCGTGGCCACACCTCCTAGACCACGCCCACCACTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp CACAAGGAGAAGACCCGCCCTGAGCTTTTCTGTCGGATCCCTCCCAGGCTCAGTCCCACGCTTGTGCAATaGTCTGTAAACCGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: HKEKTRPELFCRIPPRLSPTLVQ*SVNRGA
Trigger: AGCTCCACGGTTTACAGACAATTGCACAAGCGTGGG...ACTGAGCCTGGGAGGGATCCGACAGAAAAGCTCAGGGCGGGTCTTCTCCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AGCTGCCACCCAAACCAAGCTGGGTGTTATGCCAGGAGAGAGGAGACCTTTCTCCTGCCACCCACAGACTaGCTGTGTGACCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SCHPNQAGCYARREETFLLPPTD*LCDLEE
Trigger: TTCCTCCAGGTCACACAGCAAGTCTGTGGGTGGCAG...GAGAAAGGTCTCCTCTCTCCTGGCATAACACCCAGCTTGGTTTGGGTGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp GAGCACAGTAGAGGGCAGCCTGGTTCTAGGTGGAGCTGTACCCTGAATTTGCTACCTTCCCGAAGGACCTaGGCCTTGATGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: EHSRGQPGSRWSCTLNLLPSRRT*ALMYLR
Trigger: CCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGG...TAGCAAATTCAGGGTACAGCTCCACCTAGAACCAGGCTGCCCTCTACTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGATTCTTCAGGCAGGACTaGACCTCCAGGATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGFFRQD*TSRICF
Trigger: GAAGCAGATCCTGGAGGTCAAGTCCTGCCTGAAGAA...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp CAATTGTCTGTAAACCGTGGAGCTCAATGGCGGAGGTCAATGTCTAGCTGCAAAGCCGCCTCCTTGGTCTaGTTCTTCAGGCAGGACTTG +
Preference number: 5 (lower is better)
Translates to: QLSVNRGAQWRRSMSSCKAASLV*FFRQDL
Trigger: CAAGTCCTGCCTGAAGAACAAGACCAAGGAGGCGGC...TTTGCAGCTAGACATTGACCTCCGCCATTGAGCTCCACGGTTTACAGACAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS-3UTR CAA 90 bp AATGGCGGAGGTCAATGTCTAGCTGCAAACAGGCCACGGAAACCCTGTTTGGGAAGAGGAAGGTGTAACTaGAGTCTCTGCCTAACTCTT +
Preference number: 5 (lower is better)
Translates to: NGGGQCLAANRPRKPCLGRGRCN*SLCLTL
Trigger: AAGAGTTAGGCAGAGACTCAAGTTACACCTTCCTCT...TCCCAAACAGGGTTTCCGTGGCCTGTTTGCAGCTAGACATTGACCTCCGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GCGGGCCGGGCCTCTGGCACGGCTCAGAGAGCTGCCTaGAAGCGCCGGGAGCTGCGGGGAGCTGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: AGRASGTAQRAA*KRRELRGAACC
Trigger: GCAGCAGGCAGCTCCCCGCAGCTCCCGGCGCTTCCAGGCAGCTCTCTGAGCCGTGCCAGAGGCCCGGCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp CGAGCCTCCCAGAGTCTGTGGTGGCTCCCGGGTCACTaGGCGGGGATCCTCCCCTGCGCTGCTCGGGACGCC +
Preference number: 6 (lower is better)
Translates to: RASQSLWWLPGH*AGILPCAARDA
Trigger: GGCGTCCCGAGCAGCGCAGGGGAGGATCCCCGCGCAGTGACCCGGGAGCCACCACAGACTCTGGGAGGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp GCTGCCTGGAAGCGCCGGGAGCTGCGGGGAGCTGCCTaGTGCTCCAGCCGCCGAGCCTCCCAGAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: AAWKRRELRGAA*CSSRRASQSLW
Trigger: CCACAGACTCTGGGAGGCTCGGCGGCTGGAGCAGCAGGCAGCTCCCCGCAGCTCCCGGCGCTTCCAGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp AATGGCGGGCCGGGCCTCTGGCACGGCTCAGAGAGCTaGCTGGAAGCGCCGGGAGCTGCGGGGAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: NGGPGLWHGSES*LEAPGAAGSCL
Trigger: CAGGCAGCTCCCCGCAGCTCCCGGCGCTTCCAGGCAGCTCTCTGAGCCGTGCCAGAGGCCCGGCCCGCCATT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp TCTCGTCGCCCGACACCAGCAGCTCGGCCTCGGTGGTaGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCT +
Preference number: 6 (lower is better)
Translates to: SRRPTPAARPRW*APGGTARRGRS
Trigger: AGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp AGTTCTCGTCGCCCGACACCAGCAGCTCGGCCTCGGTaGTGGGCACCTGGCGGCACAGCTCGCCGTGGTCGT +
Preference number: 6 (lower is better)
Translates to: SSRRPTPAARPR*WAPGGTARRGR
Trigger: ACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGGCGACGAGAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp GCGTGTCCCAGGTGGGCGAACCCTCCTGGTCGCCTATaGCACCTTCTCCGCCTGCCCCAAAGGGGGTCGCTC +
Preference number: 6 (lower is better)
Translates to: ACPRWANPPGRL*HLLRLPQRGSL
Trigger: GAGCGACCCCCTTTGGGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp CCCGACACCAGCAGCTCGGCCTCGGTGGTGGGCACCTaGCGGCACAGCTCGCCGTGGTCGTTCTTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: PDTSSSASVVGT*RHSSPWSFLLP
Trigger: TGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGCCGAGCTGCTGGTGTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GGCCAAGCCCCGCCCCAGCATCCCTCGCTCACTGGATaGTGCACTTGTCCCTCTCACGGGCCTGGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: GQAPPQHPSLTG*CTCPSHGPGLP
Trigger: GGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGGGCTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp GCCTCGGTGGTGGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTaGTTGCCACAGATGACCATGGGCAGCTCCGCCGCCTCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: ASVVGTWRHSSPWSF*LPQMTMGSSAASLV
Trigger: GACCAAGGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp GGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTTGTaGCCACAGATGACCATGGGCAGCTCCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: GTWRHSSPWSFL*PQMTMGSSAAS
Trigger: GGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp GTGGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTaGTTGCCACAGATGACCATGGGCAGCTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: VGTWRHSSPWSF*LPQMTMGSSAA
Trigger: GGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp CCCGCCCCAGCATCCCTCGCTCACTGGATGGTGCACTaGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACC +
Preference number: 6 (lower is better)
Translates to: PAPASLAHWMVH*SLSRAWPSRRT
Trigger: GGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp TGGCCAAGCCCCGCCCCAGCATCCCTCGCTCACTGGATGGTGCACTaGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: WPSPAPASLAHWMVH*SLSRAWPSRRTLAL
Trigger: CAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGGGCTTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp CAAGCCCCGCCCCAGCATCCCTCGCTCACTGGATGGTaGACTTGTCCCTCTCACGGGCCTGGCCTTCCCGAA +
Preference number: 6 (lower is better)
Translates to: QAPPQHPSLTGW*TCPSHGPGLPE
Trigger: TTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGCGAGGGATGCTGGGGCGGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GACTGTGGGTGCGTGTCCCAGGTGGGCGAACCCTCCTaGTCGCCTATGCCACCTTCTCCGCCTGCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: DCGCVSQVGEPS*SPMPPSPPAPK
Trigger: CTTTGGGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGCACCCACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GCCTCGGTGGTGGGCACCTGGCGGCACAGCTCGCCGTaGTCGTTCTTGTTGCCACAGATGACCATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: ASVVGTWRHSSP*SFLLPQMTMGS
Trigger: GCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp TCGGTGGTGGGCACCTGGCGGCACAGCTCGCCGTGGTCGTTCTTGTaGCCACAGATGACCATGGGCAGCTCCGCCGCCTCCTTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SVVGTWRHSSPWSFL*PQMTMGSSAASLVL
Trigger: CAAGACCAAGGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCCGCCAGGTGCCCACCACCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp CTCTCACGGGCCTGGCCTTCCCGAAGGACCTTGGCCTTGATGTACTaGAGGTCACTGTTGACGCTGGGGCGGCGGGCGAAGGGCGAGACC +
Preference number: 6 (lower is better)
Translates to: LSRAWPSRRTLALMY*RSLLTLGRRAKGET
Trigger: GGTCTCGCCCTTCGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 72 bp CGAAGGGCGAGACCATGCCATAGGCGTCCATCTCCTTaGCGCGGCGCATGCAGAAGGGCCTGGGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RRARPCHRRPSP*RGACRRAWGGR
Trigger: CCTTCCACCCCAGGCCCTTCTGCATGCGCCGCGTCAAGGAGATGGACGCCTATGGCATGGTCTCGCCCTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 72 bp GCCCACCCGAGAGGCACCCAGCACCACCATGCGGTATaGGTTTTTGGCGGGCACACTGAGCGTGCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: AHPRGTQHHHAV*VFGGHTERAVP
Trigger: GGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTGCCTCTCGGGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS GCA 72 bp ATGCAGAAGGGCCTGGGGTGGAAGGCGTCACCGTACTaGACGGAGATCTTGCGATGCAGGGCGGGGCTCATC +
Preference number: 6 (lower is better)
Translates to: MQKGLGWKASPY*TEILRCRAGLI
Trigger: GATGAGCCCCGCCCTGCATCGCAAGATCTCCGTGCAGTACGGTGACGCCTTCCACCCCAGGCCCTTCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GGTCCTTTGGAGGTGACTGTGGGTGCGTGTCCCAGGTaGGCGAACCCTCCTGGTCGCCTATGCCACCTTCTC +
Preference number: 6 (lower is better)
Translates to: GPLEVTVGACPR*ANPPGRLCHLL
Trigger: GAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGCACCCACAGTCACCTCCAAAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp AAGCGGCCATTGAGGAAGCGAGACACGATGGAGCTCTaGCCCACCCGAGAGGCACCCAGCACCACCATGCGG +
Preference number: 6 (lower is better)
Translates to: KRPLRKRDTMEL*PTREAPSTTMR
Trigger: CCGCATGGTGGTGCTGGGTGCCTCTCGGGTGGGCAAGAGCTCCATCGTGTCTCGCTTCCTCAATGGCCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp GCCTGGCCTTCCCGAAGGACCTTGGCCTTGATGTACTaGAGGTCACTGTTGACGCTGGGGCGGCGGGCGAAG +
Preference number: 6 (lower is better)
Translates to: AWPSRRTLALMY*RSLLTLGRRAK
Trigger: CTTCGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp CACTTGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCTTGGCCTaGATGTACTTGAGGTCACTGTTGACGCTGGGGCGGCGGGCGAAG +
Preference number: 6 (lower is better)
Translates to: HLSLSRAWPSRRTLA*MYLRSLLTLGRRAK
Trigger: CTTCGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp ATGGTGCACTTGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCTaGGCCTTGATGTACTTGAGGTCACTGTTGACGCTGGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: MVHLSLSRAWPSRRT*ALMYLRSLLTLGRR
Trigger: CCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 72 bp GGCACAGCTCGCCGTGGTCGTTCTTGTTGCCACAGATaGCCATGGGCAGCTCCGCCGCCTCCTTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: GTARRGRSCCHR*PWAAPPPPWSC
Trigger: ACAAGACCAAGGAGGCGGCGGAGCTGCCCATGGTCATCTGTGGCAACAAGAACGACCACGGCGAGCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp ATCTCCTTGACGCGGCGCATGCAGAAGGGCCTGGGGTaGAAGGCGTCACCGTACTGCACGGAGATCTTGCGA +
Preference number: 6 (lower is better)
Translates to: ISLTRRMQKGLG*KASPYCTEILR
Trigger: TCGCAAGATCTCCGTGCAGTACGGTGACGCCTTCCACCCCAGGCCCTTCTGCATGCGCCGCGTCAAGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp CGAGAGGCACCCAGCACCACCATGCGGTATGAGTTTTaGGCGGGCACACTGAGCGTGCAGTTCCCGCTGGAC +
Preference number: 6 (lower is better)
Translates to: REAPSTTMRYEF*AGTLSVQFPLD
Trigger: GTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTGCCTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp CGAAGGACCTTGGCCTTGATGTACTTGAGGTCACTGTaGACGCTGGGGCGGCGGGCGAAGGGCGAGACCATG +
Preference number: 6 (lower is better)
Translates to: RRTLALMYLRSL*TLGRRAKGETM
Trigger: CATGGTCTCGCCCTTCGCCCGCCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp CTCTCACGGGCCTGGCCTTCCCGAAGGACCTTGGCCTaGATGTACTTGAGGTCACTGTTGACGCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LSRAWPSRRTLA*MYLRSLLTLGR
Trigger: CCGCCCCAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp TTGCCCACCCGAGAGGCACCCAGCACCACCATGCGGTATGAGTTTTaGGCGGGCACACTGAGCGTGCAGTTCCCGCTGGACAAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: LPTREAPSTTMRYEF*AGTLSVQFPLDKVF
Trigger: GAAGACTTTGTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGCTGGGTGCCTCTCGGGTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CCA 72 bp GCTCACTGGATGGTGCACTTGTCCCTCTCACGGGCCTaGCCTTCCCGAAGGACCTTGGCCTTGATGTACTTG +
Preference number: 6 (lower is better)
Translates to: AHWMVHLSLSRA*PSRRTLALMYL
Trigger: CAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAAGTGCACCATCCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 90 bp TGGTCCTCAAAGCGGCCATTGAGGAAGCGAGACACGATGGAGCTCTaGCCCACCCGAGAGGCACCCAGCACCACCATGCGGTATGAGTTT +
Preference number: 6 (lower is better)
Translates to: WSSKRPLRKRDTMEL*PTREAPSTTMRYEF
Trigger: AAACTCATACCGCATGGTGGTGCTGGGTGCCTCTCGGGTGGGCAAGAGCTCCATCGTGTCTCGCTTCCTCAATGGCCGCTTTGAGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS CAA 72 bp TTGTCCCTCTCACGGGCCTGGCCTTCCCGAAGGACCTaGGCCTTGATGTACTTGAGGTCACTGTTGACGCTG +
Preference number: 6 (lower is better)
Translates to: LSLSRAWPSRRT*ALMYLRSLLTL
Trigger: CAGCGTCAACAGTGACCTCAAGTACATCAAGGCCAAGGTCCTTCGGGAAGGCCAGGCCCGTGAGAGGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216127.5
CDS TCA 72 bp GCACCACCATGCGGTATGAGTTTTTGGCGGGCACACTaGGCGTGCAGTTCCCGCTGGACAAAGTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: APPCGMSFWRAH*ACSSRWTKSSS
Trigger: TGATGAAGACTTTGTCCAGCGGGAACTGCACGCTCAGTGTGCCCGCCAAAAACTCATACCGCATGGTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216127.5