RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASAL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111344

Ensembl transcript IDs: ENST00000261729.9, ENST00000418411.6, ENST00000446861.7, ENST00000546530.5, ENST00000546727.5, ENST00000547810.1, ENST00000548055.1, ENST00000548972.5, ENST00000549444.5, ENST00000551051.5

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAGCTCT +
Preference number: 1 (lower is better)
Translates to: SKRSKETGDSRGRMR*RGPPGSCSSFRASS
Trigger: AGAGCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR TCA 90 bp TTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: FTQCKAGPCQRASMP*VLDSRHTGLGTSLG
Trigger: TCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR GCA 90 bp ATACCCTCAGATTCTGAGTCAGTAGCTGGCTGGGCCTCAGAAATCTaGATTTCTAGCAGACATTCTAGCGGGTGGTCTTTGGCCCACAGT +
Preference number: 1 (lower is better)
Translates to: IPSDSESVAGWASEI*ISSRHSSGWSLAHS
Trigger: ACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAATGCAGATTTCTGAGGCCCAGCCAGCTACTGACTCAGAATCTGAGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR CCA 90 bp GATTCTTGCCTTCATATACCCTCAGATTCTGAGTCAGTAGCTGGCTaGGCCTCAGAAATCTGCATTTCTAGCAGACATTCTAGCGGGTGG +
Preference number: 1 (lower is better)
Translates to: DSCLHIPSDSESVAG*ASEICISSRHSSGW
Trigger: CCACCCGCTAGAATGTCTGCTAGAAATGCAGATTTCTGAGGCCCAGCCAGCTACTGACTCAGAATCTGAGGGTATATGAAGGCAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR TCA 90 bp CGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTaGACTACCTCATTGGAATCCAGTTTGAAAACCACACATCTAGAC +
Preference number: 1 (lower is better)
Translates to: RVVFGPQSEKLLPCS*TTSLESSLKTTHLD
Trigger: GTCTAGATGTGTGGTTTTCAAACTGGATTCCAATGAGGTAGTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR-3UTR GCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR GCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR GCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAACTCCCGGGGCAGGATaGGCTGAAGAGGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPTPGAG*AEEGPL
Trigger: CAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR GCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGTGCAAGGCTGGCCCCTaGCAAAGGGCTTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: SETQREINSLAQGLPGSKCKAGP*QRASMP
Trigger: GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
3UTR-3UTR CCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAACTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTELKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCACTCAGTGCAAGGCTaGCCCCTGCCAAAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETHSVQG*PLPKGF
Trigger: GAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTG...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETRASMP*VLDSRH
Trigger: GTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCT...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGACTCCCGGGGCAGGATaGGCTGAAGAGGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: NNITWASGIQVQLYPAAQTPGAG*AEEGPL
Trigger: CAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSRASMP*VLDSRH
Trigger: GTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCT...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR CCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTCTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: GSLSYPLQSESSQRASFTLKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCTGGCCTCCTTGGTATaGATAGAGGCCAGTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGLASLV*IEASLV
Trigger: CACCAAACTGGCCTCTATCCATACCAAGGAGGCCAG...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR-3UTR TCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTATCCACTCCAGTCTaGATCAAGCCAGAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: LVPIWGNNITWASGIQVQLSTPV*IKPEGK
Trigger: CTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAG...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR TCA 90 bp CTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTGAACGAAAACAGGAAGGAGTaGGGCCATTTAGTGCCCATC +
Preference number: 2 (lower is better)
Translates to: LAGGLWPTVRETPPLFLNENRKE*GHLVPI
Trigger: GATGGGCACTAAATGGCCTCACTCCTTCCTGTTTTC...GTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR-3UTR GCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGATGCAAGGCTGGCCCCTaGCAAAGGGCTTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: SQISQVPYPIHSSLNQARCKAGP*QRASMP
Trigger: GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR CCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGACTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 2 (lower is better)
Translates to: SQISQVPYPIHSSLNQARLKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR-3UTR CCA 90 bp TGCCCATTCCCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTAGGCAACAACATCACATaGGCATCAGGAATTCAGGTC +
Preference number: 2 (lower is better)
Translates to: CPFPRPVVLKADTHPNDLGNNIT*ASGIQV
Trigger: GACCTGAATTCCTGATGCCCATGTGATGTTGTTGCC...TAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGGGAATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR CAA 90 bp GCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTaGAACTACCTCATTGGAATCCAGTTTGAAAACCACACATCTAGA +
Preference number: 2 (lower is better)
Translates to: AGGLWPTVRETPPLF*NYLIGIQFENHTSR
Trigger: TCTAGATGTGTGGTTTTCAAACTGGATTCCAATGAGGTAGTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR CAA 90 bp ATTCTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTaGTTCTTGAACTACCTCATTGGAATCCAGTTTGAAAACCACACA +
Preference number: 2 (lower is better)
Translates to: ILAGGLWPTVRETPP*FLNYLIGIQFENHT
Trigger: TGTGTGGTTTTCAAACTGGATTCCAATGAGGTAGTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR TCA 72 bp TGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCACACAGGACTAGGCACG +
Preference number: 3 (lower is better)
Translates to: CKAGPCQRASMP*VLDSRHTGLGT
Trigger: CGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR CCA 72 bp GGCCATTTAGTGCCCATCTGGGGCAACAACATCACATaGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCA +
Preference number: 3 (lower is better)
Translates to: GHLVPIWGNNIT*ASGIQVQLYPA
Trigger: TGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAAATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
3UTR CCA 72 bp TCTGCATTTCTAGCAGACATTCTAGCGGGTGGTCTTTaGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: SAFLADILAGGL*PTVRETPPLFL
Trigger: CAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR CCA 72 bp TCAGAAATCTGCATTTCTAGCAGACATTCTAGCGGGTaGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: SEICISSRHSSG*SLAHSQRNSSL
Trigger: AAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAATGCAGATTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
3UTR TCA 72 bp TCTAGACTTTCCCTCCTCTTTTTATACAGGGTAATCTaGGACCCAGAGAGAGATAAACAGCCTGGCCCAAGG +
Preference number: 3 (lower is better)
Translates to: SRLSLLFLYRVI*DPERDKQPGPR
Trigger: CCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGATTACCCTGTATAAAAAGAGGAGGGAAAGTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGCTGCAGCCGGCGGCTaGGCGCTCAGCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSAAAGG*ALSLEA
Trigger: TGCCTCCAGGCTGAGCGCTCAGCCGCCGGCTGCAGC...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAGGCGCAGCGGGCTCTTaGCGAGGCGTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLGAAGS*RGVWSS
Trigger: GGAGCTCCAGACGCCTCGGCAAGAGCCCGCTGCGCC...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS-3UTR GCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCTGTGCAGCGCCCCCGTaGCGTCCTGCGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSCAAPP*RPASPP
Trigger: AGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACA...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGGGGCGCTGGCCTTaGGCAAGGCCGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPWGRWP*ARPRAT
Trigger: AGTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCA...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGAGCTCCACCCGCAGTaGGGACGGGGCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSELHPQ*GRGTWH
Trigger: ATGCCAGGTGCCCCGTCCCCACTGCGGGTGGAGCTC...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCCGGAAGGCACCGGGGTaGCAGGCGGCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSRKAPG*QAASLF
Trigger: GAACAAGCTGGCCGCCTGCCACCCCGGTGCCTTCCG...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTACGGAAGGCACCGGGGTaGCAGGCGGCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLRKAPG*QAASLF
Trigger: GAACAAGCTGGCCGCCTGCCACCCCGGTGCCTTCCG...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAGGGTGTTGGGGTCCATaGTCCGAGCCACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLGCWGP*SEPPHA
Trigger: GGCGTGAGGTGGCTCGGACCATGGACCCCAACACCC...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCTCCTGGTGCTCGGCCTaGGGGAAGCGCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSSWCSA*GKRSST
Trigger: AGTGGAGGAGCGCTTCCCCCAGGCCGAGCACCAGGA...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR CCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCTGCACTGGAGGTAGGTaGTGTGCAGCGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSCTGGR*CAAPPC
Trigger: GCACGGGGGCGCTGCACACCACCTACCTCCAGTGCA...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCAGAGGGTCTCCCCGCTaGGCCAGACGTAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSRGSPR*ARRSAS
Trigger: AGAAGCGCTACGTCTGGCTCAGCGGGGAGACCCTCT...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACGCCTCGTGGTCCCAGTaGCGCCTGTCCGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHASWSQ*RLSETR
Trigger: CCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGC...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCAAGGTCCAGCGCGCGCTaGGGAAGGCACCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPRSSAR*GRHRGG
Trigger: GCCACCCCGGTGCCTTCCGCAGCGCGCGCTGGACCT...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGCCTTCCCTCGCTCCTaGTGCTGGAACTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSAFPRS*CWNSSW
Trigger: CCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAAGGC...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTACTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLLKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACACTCCCGGGGCAGGATaGGCTGAAGAGGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHTPGAG*AEEGPL
Trigger: CAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCAGGAGAAGGTGTAGGTaGCCGGGGAGGGAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRARRRCR*PGRERP
Trigger: CGGGCGCTCCCTCCCCGGGCACCTACACCTTCTCCT...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS-3UTR GCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCGCCCCCGTGCCGTCCTaGGTCACCACCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAAPVPS*VTTCHS
Trigger: TGAGTGGCAGGTGGTGACGCAGGACGGCACGGGGGC...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS-3UTR CCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCAATCCTCCTCGGCTCTaGGAAAGGGCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSNPPRL*ERAGGG
Trigger: TCCGCCTCCTGCCCTTTCCCAGAGCCGAGGAGGATT...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAATCACGTGGGGCAGTTaGAAGGCGCCCTCGTCTACG +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLITWGS*KAPSST
Trigger: CGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGAT...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACTCGGGTTGGGGGCGCTaGCCTTGCGCAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHSGWGR*PCARPR
Trigger: TCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGA...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTACACTCAGTGCAAGGCTaGCCCCTGCCAAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLHSVQG*PLPKGF
Trigger: GAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTG...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAAGACGTAGCGCTTCTTaGAGGCAAAGCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLRRSAS*RQSAWP
Trigger: TGGCCACGCGCTTTGCCTTCAAGAAGCGCTACGTCT...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCCTCACCCTGCACTTCTaGATCTGGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPLTLHF*IWVHSA
Trigger: AGCCGAGTGGACCCAGATGCAGAAGTGCAGGGTGAG...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCGGCCCAGGTCCATCTTaGAGGGATCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPGPGPS*RDPAPC
Trigger: ACATGGAGCTGGATCCCTGCAAGATGGACCTGGGCC...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCAGGTCCAGCGCGCGCTaGGGAAGGCACCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTRSSAR*GRHRGG
Trigger: GCCACCCCGGTGCCTTCCGCAGCGCGCGCTGGACCT...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCAGGCGGGCAGTTGCTaGTCTTTGCCGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAQAGSC*SLPGQD
Trigger: GTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTG...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACCAGCAGGCGGGCAGTTaGTGCTCTTTGCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHQQAGS*CSLPGQ
Trigger: CTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTG...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGGCTCCCTGCCTCGTaGTCCCAGTGCCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPWLPAS*SQCRLS
Trigger: GGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCA...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTTCCCAGACACGTCCTTaGCAGGCAGCGCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPSQTRP*QAARGP
Trigger: AGGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGA...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGGGGACGGGGCACCTaGCATCTCCCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPWGRGT*HLPQLQ
Trigger: CTGGAGCTGCGGGAGATGCCAGGTGCCCCGTCCCCA...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCAGAGCTCCACCCGCAGTaGGGACGGGGCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPELHPQ*GRGTWH
Trigger: ATGCCAGGTGCCCCGTCCCCACTGCGGGTGGAGCTC...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACTGCACTGGAGGTAGGTaGTGTGCAGCGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHCTGGR*CAAPPC
Trigger: GCACGGGGGCGCTGCACACCACCTACCTCCAGTGCA...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGTGGGGGCGCTGGCCTTaGGCAAGGCCGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWWGRWP*ARPRAT
Trigger: AGTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCA...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACTGCAAGGCTGGCCCCTaGCAAAGGGCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHCKAGP*QRASMP
Trigger: GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACGATGGCGTCCACGATaGGCCCCAGGTAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPRWRPR*APGSPS
Trigger: TGACGGGCTACCTGGGGCCCATCGTGGACGCCATCG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACCAGCTTGTTCGGGTTaGGGGCGCTGGCCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPPACSG*GRWPCA
Trigger: TGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCGGAAGCGAGTCTTCTTaGTGGTTGAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPGSESS*WLRSPS
Trigger: GCTTGGAGACCTCAACCATCAAGAAGACTCGCTTCC...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCCCGAGAGTGCGCCTTTaGAGGAGATCCTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPPRVRL*RRSSGC
Trigger: GCACCCGGAGGATCTCCTTCAAAGGCGCACTCTCGG...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCAGCCTTGGTTCTTCCTaGGGGCACCTGATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSSLGSS*GHLILE
Trigger: TTCCAGAATCAGGTGCCCTCAGGAAGAACCAAGGCT...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTATATACCCTCAGATTCTaGGTCAGTAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLYTLRF*VSSWLG
Trigger: GCCCAGCCAGCTACTGACTCAGAATCTGAGGGTATA...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCAGCACTTCATCCCAGTaGGGGAAGCGAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSSTSSQ*GKRVFL
Trigger: CAAGAAGACTCGCTTCCCGCACTGGGATGAAGTGCT...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCAAGGAGATCCTCCGGGTaGGGCCCAGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPRRSSG*GPGPSC
Trigger: GCAAGATGGACCTGGGCCGCACCCGGAGGATCTCCT...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCACTCGCCGGTGCAGCTaGTTGAAGGCGAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPTRRCS*LKARRM
Trigger: CATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGT...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTTCCTCCACTCGCCGGTaGAGCTGCTTGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPSSTRR*SCLKAR
Trigger: CCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGA...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCTCCTGCGTCACCACCTaGATCACGTGGGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRASCVTT*ITWGSW
Trigger: CCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGA...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTCAGCAGGCGGGCAGTTaGTGCTCTTTGCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSQQAGS*CSLPGQ
Trigger: CTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTG...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAAGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTEGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGTTGGTGGCAAGGTCCTaGCGGCAGTCCCCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWLVARS*RQSPKV
Trigger: GACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAA...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTCGGGTTGGGGGCGCTaGCCTTGCGCAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETSGWGR*PCARPR
Trigger: TCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACCTCGCTCCTGCTGCTaGAACTCCTCGTGGGCACGA +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPPRSCC*NSSWAR
Trigger: TCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGGCCGGTGCAGCTGCTTaGAGGCGAGGCGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGAGAAA*RRGAWR
Trigger: CCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGC...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGGCTGCAGCCGGCGGCTaGGCGCTCAGCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQAAAGG*ALSLEA
Trigger: TGCCTCCAGGCTGAGCGCTCAGCCGCCGGCTGCAGC...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCGAGACCCGGGTAGCATaGAGACACCTGCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPETRVA*RHLPPL
Trigger: GAGAGGAGGCAGGTGTCTGCATGCTACCCGGGTCTC...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261729.9
CDS-3UTR GCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGTCAAGCCTGGCTCCCTaGCTCGTGGTCCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKSSLAP*LVVPVP
Trigger: CGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGA...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCAAGCAGTGTCCTCCTCTaGTGGCCCCTGCACAGACTC +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPSSVLL*WPLHRL
Trigger: GAGTCTGTGCAGGGGCCAGCAGAGGAGGACACTGCT...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTAGGAGATCCTCCGGGTaGGGCCCAGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSRRSSG*GPGPSC
Trigger: GCAAGATGGACCTGGGCCGCACCCGGAGGATCTCCT...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGCTGGTCTCCCGCATCTaGTCCTCCGAGAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWLVSRI*SSESAP
Trigger: AGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCAG...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGACTCGCCGGTGCAGCTaGTTGAAGGCGAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWTRRCS*LKARRM
Trigger: CATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGT...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACACACGTGAGACACACTaGAGCAGGAAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHTRETH*SRKGCR
Trigger: CCTGCACCCCTTCCTGCTGCAGTGTGTCTCACGTGT...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCGCCCCAGGAGCAGCTaGCGATACACTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETRPRSS*RYTVWA
Trigger: GGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCG...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGCAGGCGGGCAGTTGCTaGTCTTTGCCGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKQAGSC*SLPGQD
Trigger: GTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTG...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTTTCCCTCGCTCCTGCTaGTGGAACTCCTCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPFPRSC*WNSSWA
Trigger: TGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAA...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTGCCTTCCCTCGCTCCTaGTGCTGGAACTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSAFPRS*CWNSSW
Trigger: CCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAAGGC...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTCACCTGCTTCAAGCCTaGCTCCCTGCCTCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSHLLQA*LPASWS
Trigger: GGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTG...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGATCCCAGACACGTCCTTaGCAGGCAGCGCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRSQTRP*QAARGP
Trigger: AGGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGA...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTGGGGACGGGGCACCTaGCATCTCCCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVWGRGT*HLPQLQ
Trigger: CTGGAGCTGCGGGAGATGCCAGGTGCCCCGTCCCCA...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCAAATCCTCCTCGGCTCTaGGAAAGGGCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPNPPRL*ERAGGG
Trigger: TCCGCCTCCTGCCCTTTCCCAGAGCCGAGGAGGATT...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCGTTTCACCAGCTTGGTaGCAAGGTCCTGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAVSPAW*QGPGGS
Trigger: ACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAAC...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGCGATGGCGTCCACGATaGGCCCCAGGTAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKRWRPR*APGSPS
Trigger: TGACGGGCTACCTGGGGCCCATCGTGGACGCCATCG...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATCCACGGAGCCCACGATaGCGTCCACGATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNPRSPR*RPRWAP
Trigger: TGGGGCCCATCGTGGACGCCATCGTGGGCTCCGTGG...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACATCCTGGTGCTCGGCCTaGGGGAAGCGCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTSWCSA*GKRSST
Trigger: AGTGGAGGAGCGCTTCCCCCAGGCCGAGCACCAGGA...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR CCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCAGGTACTTCACATCCTaGTGCTCGGCCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRARYFTS*CSAWGK
Trigger: CTTCCCCCAGGCCGAGCACCAGGATGTGAAGTACCT...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR CCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGAGCCTTCTCGAACAATaGCCGAGGGCGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWSLLEQ*PRAGTG
Trigger: CCCTGTTCCCGCCCTCGGCCATTGTTCGAGAAGGCT...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTTGCACCTGTAGTCGCAGCTGCTCTGGAGGCTAACGTGGGAGGATCACTGAAGTGCACTGGAGGTAGGTaGTGTGCAGCGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LAPVVAAALEANVGGSLKCTGGR*CAAPPC
Trigger: GCACGGGGGCGCTGCACACCACCTACCTCCAGTGCA...CTTCAGTGATCCTCCCACGTTAGCCTCCAGAGCAGCTGCGACTACAGGTGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCGGGTTGGGGGCGCTaGCCTTGCGCAAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVSGWGR*PCARPR
Trigger: TCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGA...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGCCAGCTTGTTCGGGTTaGGGGCGCTGGCCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKPACSG*GRWPCA
Trigger: TGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGG...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGTGCTGGAACTCCTCGTaGGCACGATCCAGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWCWNSS*ARSRSA
Trigger: CGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCA...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTCTGAGTTTGGCACACTaGACCCCCACCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPLSLAH*TPTQPW
Trigger: CCAAGGCTGGGTGGGGGTCCAGTGTGCCAAACTCAG...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTCCACCTCACGCCGGGTaGGATAGTCCAGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSPPHAG*DSPESA
Trigger: GGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGG...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGGCCGGTGCAGCTGCTTaGAGGCGAGGCGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQAGAAA*RRGAWR
Trigger: CCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGC...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCTCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTSSPPG*QLSVYG
Trigger: GCCGTACACACTCAGCTGTCACCCTGGGGGACTGGA...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACATCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTSSPPG*QLSVYG
Trigger: GCCGTACACACTCAGCTGTCACCCTGGGGGACTGGA...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPRASMP*VLDSRH
Trigger: GTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCT...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCGGCAGTAGGGGTCGCTaGTCCCAGACACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTGSRGR*SQTRPW
Trigger: CCAAGGACGTGTCTGGGAGCAGCGACCCCTACTGCC...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACCTGCTCCTCCGAGAGTaGGCCTTTGAAGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHLLLRE*AFEGDP
Trigger: AGGATCTCCTTCAAAGGCGCACTCTCGGAGGAGCAG...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGTTGCCTTGGCCCAGCTaGTGGCCCAGGTTTCCAATG +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWLPWPS*WPRFPM
Trigger: CATTGGAAACCTGGGCCAGCAGCTGGGCCAAGGCAA...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTTCCTGCGTCACCACCTaGATCACGTGGGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSSCVTT*ITWGSW
Trigger: CCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGA...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGCCCCCGTGCCGTCCTaGGTCACCACCTGCATCACG +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVAPVPS*VTTCIT
Trigger: CGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGC...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGTGTGCAGCGCCCCCGTaGCGTCCTGCGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGCAAPP*RPASPP
Trigger: AGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACA...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAGCTCATTCACATTCTTaGACTGGAGGTAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLAHSHS*TGGRWC
Trigger: ACACCACCTACCTCCAGTGCAAGAATGTGAATGAGC...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGAGGTCCAGCGCGCGCTaGGGAAGGCACCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQRSSAR*GRHRGG
Trigger: GCCACCCCGGTGCCTTCCGCAGCGCGCGCTGGACCT...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTGCAGTTGCTGCTCTTTaGCGGGCCAGGACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ETQREINSLAQGLPGSKGAVAAL*RARTSG
Trigger: TCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGC...ACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATCAGGCGGGCAGTTGCTaGTCTTTGCCGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNQAGSC*SLPGQD
Trigger: GTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTG...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATGGCACGATCCAGGTCTaGGAGCACCTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNGTIQV*EHLQQA
Trigger: CGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCC...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACATGCAAGGCTGGCCCCTaGCAAAGGGCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTCKAGP*QRASMP
Trigger: GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTTGGTGGCAAGGTCCTaGCGGCAGTCCCCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETLVARS*RQSPKV
Trigger: GACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGGGTGTTGGGGTCCATaGTCCGAGCCACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVGCWGP*SEPPHA
Trigger: GGCGTGAGGTGGCTCGGACCATGGACCCCAACACCC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTCCACGGAGCCCACGATaGCGTCCACGATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCPRSPR*RPRWAP
Trigger: TGGGGCCCATCGTGGACGCCATCGTGGGCTCCGTGG...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTTGGGGGTCCGCGTGTTaGTCCCGAAGGTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSWGSAC*SRRSNS
Trigger: GCTGTTTGACCTTCGGGACCAACACGCGGACCCCCA...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSSERLV*GSACWS
Trigger: GGACCAACACGCGGACCCCCAGACTAGCCGCTCACT...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCACCAGCTTGTTCGGGTTaGGGGCGCTGGCCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPPACSG*GRWPCA
Trigger: TGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGG...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGCTGAGCGCTCAGCCTaGAGGCAGCAGGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVAERSA*RQQVQR
Trigger: GCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCAGC...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGGCTGAGCGCTCAGCCTaGAGGCAGCAGGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGAERSA*RQQVQR
Trigger: GCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCAGC...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTGAACGCTGAGCGCTCAGCCTaGAGGCAGCAGGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LAGGLWPTVRETPPLFLNAERSA*RQQVQR
Trigger: GCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCAGC...GTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACCTGGAAGCTTGTGGTTaGAGTCCTAGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHLEACG*SPRPRA
Trigger: TGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAG...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTCTGAGTTTGGCACACTaGACCCCCACCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSLSLAH*TPTQPW
Trigger: CCAAGGCTGGGTGGGGGTCCAGTGTGCCAAACTCAG...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGTCAAGGGAGGGGCCTTaGACATCCCCTTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWSREGP*TSPSIS
Trigger: CGAGATGGAAGGGGATGTTCAAGGCCCCTCCCTTGA...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGCTCCAGCATCTGCACTaGCAGGCAGATCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWLQHLH*QADLTL
Trigger: CAGGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAG...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCACCGAGAGTGCGCCTTTaGAGGAGATCCTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPPRVRL*RRSSGC
Trigger: GCACCCGGAGGATCTCCTTCAAAGGCGCACTCTCGG...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCCCGAGAGTGCGCCTTTaGAGGAGATCCTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVPRVRL*RRSSGC
Trigger: GCACCCGGAGGATCTCCTTCAAAGGCGCACTCTCGG...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCAGAAGAGAAATCCACTaGTGGCCAGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSRREIH*WPGTSH
Trigger: ATGTGAAGTACCTGGCCATCAGTGGATTTCTCTTCT...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGAGAGGGTCTCCCCGCTaGGCCAGACGTAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLRGSPR*ARRSAS
Trigger: AGAAGCGCTACGTCTGGCTCAGCGGGGAGACCCTCT...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATAGAGGGTCTCCCCGCTaGGCCAGACGTAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNRGSPR*ARRSAS
Trigger: AGAAGCGCTACGTCTGGCTCAGCGGGGAGACCCTCT...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTCCAGTAATTTCAGCCTaGGCTGGTCCCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSPVISA*AGPAPG
Trigger: TCCTGGGGCGGGACCAGCTCAGGCTGAAATTACTGG...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGCGGGGCAGGATGCGCTaGAGAGGGCCCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQRGRMR*RGPPGS
Trigger: AGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCG...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAACAGGCTCCAAGGGTCTaGGTTTGGCACACTGGACCC +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTEQAPRV*VWHTGP
Trigger: GGGTCCAGTGTGCCAAACTCAGACCCTTGGAGCCTG...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGTCAAGCCTGGCTCCCTaGCTCGTGGTCCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGSSLAP*LVVPVP
Trigger: CGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGA...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCCGTCTACATGTCACCTaGTTCAAGCCTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPRLHVT*FKPGSL
Trigger: CAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACG...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAAGCAGTGTCCTCCTCTaGTGGCCCCTGCACAGACTC +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTSSVLL*WPLHRL
Trigger: GAGTCTGTGCAGGGGCCAGCAGAGGAGGACACTGCT...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGAAGGAGATCCTCCGGGTaGGGCCCAGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRRRSSG*GPGPSC
Trigger: GCAAGATGGACCTGGGCCGCACCCGGAGGATCTCCT...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATTCCTCCACTCGCCGGTaGAGCTGCTTGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNSSTRR*SCLKAR
Trigger: CCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGA...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCTACTTCACATCCTGGTaGTCGGCCTGGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTYFTSW*SAWGKR
Trigger: GCGCTTCCCCCAGGCCGAGCACCAGGATGTGAAGTA...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR GCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGCCTTCCCTCGCTCCTaGTGCTGGAACTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPAFPRS*CWNSSW
Trigger: CCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAAGGC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGGGGTCGCATGTTCCCTaGGGGTCCGTTCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWGSHVP*GSVQSQ
Trigger: TTGACTCTGAACGGACCCCCAGGGAACATGCGACCC...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCACACCTGCTTCAAGCCTaGCTCCCTGCCTCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPHLLQA*LPASWS
Trigger: GGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTG...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGCTCAGGTTCCGAGGCTaGACCAGGGGACGTCTACAT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWLRFRG*TRGRLH
Trigger: ATGTAGACGTCCCCTGGTCCAGCCTCGGAACCTGAG...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTGGGAGCCAGGTCCCTaGCCTGAAGCACATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVWEPGP*PEAHGS
Trigger: GCTGCCATGTGCTTCAGGCCAGGGACCTGGCTCCCA...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACTGCTGGAGGGTCTTTaGAGAGAACTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPLLEGL*RELHHA
Trigger: GGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTAGAGTTTCACCAGCTTaGTGGCAAGGTCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ETQREINSLAQGLPGSKGRVSPA*WQGPGG
Trigger: GCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCT...ACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPSERLV*GSACWS
Trigger: GGACCAACACGCGGACCCCCAGACTAGCCGCTCACT...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTGCCACTCAGGACTCTTaGAGAAGGAGAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSATQDS*RRRGSP
Trigger: GGGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGC...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTGCCACTCAGGACTCTTaGAGAAGGAGAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ETQREINSLAQGLPGSKGATQDS*RRRGSP
Trigger: GGGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGC...ACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATACCACCTGCATCACGTaGGGCAGTTGGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNTTCIT*GSWKAP
Trigger: GGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGT...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCAATTTCAGCCTGAGCTaGTCCCGCCCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTNFSLS*SRPRSS
Trigger: GCTGCTCCTGGGGCGGGACCAGCTCAGGCTGAAATT...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATGCTGGAACTCCTCGTaGGCACGATCCAGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTECWNSS*ARSRSA
Trigger: CGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCA...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCACTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPLKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCCTGAAGAGGGCCCCCTaGCTCTTGCTCCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVLKRAP*LLLLLP
Trigger: CGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAG...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCCTGGAAGCTTGTGGTTaGAGTCCTAGGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPLEACG*SPRPRA
Trigger: TGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAG...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGCGAGATCTTGCCGATaGTGTCGTCGTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPARSCR*CRRARQ
Trigger: CTGTCGGGCACGACGACATCATCGGCAAGATCTCGC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGGCGAGATCTTGCCGATaGTGTCGTCGTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLARSCR*CRRARQ
Trigger: CTGTCGGGCACGACGACATCATCGGCAAGATCTCGC...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCCTCCAGCATCTGCACTaGCAGGCAGATCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTLQHLH*QADLTL
Trigger: CAGGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAG...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTGCCGGTGCAGCTGCTTaGAGGCGAGGCGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVAGAAA*RRGAWR
Trigger: CCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGC...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGGAAGTCTCTCACACGTaGGACACACTGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWEVSHT*DTLQQE
Trigger: TTCCTGCTGCAGTGTGTCTCACGTGTGAGAGACTTC...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTAGACGTAGCGCTTCTTaGAGGCAAAGCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSRRSAS*RQSAWP
Trigger: TGGCCACGCGCTTTGCCTTCAAGAAGCGCTACGTCT...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTCTATCCACTCCAGTCTaGATCAAGCCAGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPLSTPV*IKPEGK
Trigger: CTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAG...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCGAAAACAGGAAGGAGTaGGGCCATTTAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAENRKE*GHLVPI
Trigger: GATGGGCACTAAATGGCCTCACTCCTTCCTGTTTTC...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGGCAGTAGGGGTCGCTaGTCCCAGACACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVGSRGR*SQTRPW
Trigger: CCAAGGACGTGTCTGGGAGCAGCGACCCCTACTGCC...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGGCCCCAAAACACACGTaGAAATGGGTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWAPKHT*KWVRCA
Trigger: GGCACATCTGACCCATTTGCACGTGTGTTTTGGGGC...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACCTTTAGGTGGCTTCTaGTGGAGGGTCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPPLGGF*WRVFGE
Trigger: CTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATTCCTCTGCTGGCCCCTaGACAGACTCCATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNSSAGP*TDSMSS
Trigger: GCTGCTCATGGAGTCTGTGCAGGGGCCAGCAGAGGA...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGCTGCTCCTCCGAGAGTaGGCCTTTGAAGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWLLLRE*AFEGDP
Trigger: AGGATCTCCTTCAAAGGCGCACTCTCGGAGGAGCAG...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCCTGGTCTCCCGCATCTaGTCCTCCGAGAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSLVSRI*SSESAP
Trigger: AGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCAG...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCTTGCCTTGGCCCAGCTaGTGGCCCAGGTTTCCAATG +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTLPWPS*WPRFPM
Trigger: CATTGGAAACCTGGGCCAGCAGCTGGGCCAAGGCAA...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATTGCCTTGGCCCAGCTaGTGGCCCAGGTTTCCAATG +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTELPWPS*WPRFPM
Trigger: CATTGGAAACCTGGGCCAGCAGCTGGGCCAAGGCAA...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATCCATCCACAGTTCCTTaGCTTGGCCCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNPSTVP*LGPAAG
Trigger: GCCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGG...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTTCCCTCGCTCCTGCTaGTGGAACTCCTCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLFPRSC*WNSSWA
Trigger: TGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAA...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTCTCAGGTTCCGAGGCTaGACCAGGGGACGTCTACAT +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSLRFRG*TRGRLH
Trigger: ATGTAGACGTCCCCTGGTCCAGCCTCGGAACCTGAG...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTAGCTGCTCTTGGCCATaGCGCCTAGCCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPSCSWP*RLATNF
Trigger: AAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCT...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATGGGAGCCAGGTCCCTaGCCTGAAGCACATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVWEPGP*PEAHGS
Trigger: GCTGCCATGTGCTTCAGGCCAGGGACCTGGCTCCCA...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGAGCTCCACCCGCAGTaGGGACGGGGCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQELHPQ*GRGTWH
Trigger: ATGCCAGGTGCCCCGTCCCCACTGCGGGTGGAGCTC...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATTGGTGGCAAGGTCCTaGCGGCAGTCCCCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVLVARS*RQSPKV
Trigger: GACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAA...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCAGGTACTTCACATCCTaGTGCTCGGCCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETRYFTS*CSAWGK
Trigger: CTTCCCCCAGGCCGAGCACCAGGATGTGAAGTACCT...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR CCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTTGCTCTGCACAGCCTTaGCAAGCAACAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSCSAQP*QATAVS
Trigger: GCTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCA...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGTGAGACACGGGGATaGAGTGACACATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPCETRG*SDTSAT
Trigger: AGTGGCAGATGTGTCACTCCATCCCCGTGTCTCACA...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGATCACGTGGGGCAGTTaGAAGGCGCCCTCGTCTACG +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLITWGS*KAPSST
Trigger: CGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGAT...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTCCTCGCTCCTGCTGCTaGAACTCCTCGTGGGCACGA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCPRSCC*NSSWAR
Trigger: TCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGG...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGCACTCAGTGCAAGGCTaGCCCCTGCCAAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLHSVQG*PLPKGF
Trigger: GAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTG...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCCTGGCCTCCTTGGTATaGATAGAGGCCAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPLASLV*IEASLV
Trigger: CACCAAACTGGCCTCTATCCATACCAAGGAGGCCAG...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTCCAGTAATTTCAGCCTaGGCTGGTCCCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCPVISA*AGPAPG
Trigger: TCCTGGGGCGGGACCAGCTCAGGCTGAAATTACTGG...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTATTATACAGGGTAATCTaGGACCCAGAGAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLLYRVI*DPERDK
Trigger: TTTATCTCTCTCTGGGTCTCAGATTACCCTGTATAA...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAAAATCCAGAGGCAGGTaGACCGTGTACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPKSRGR*TVYSSP
Trigger: GGGGGAGGAGTACACGGTGCACCTGCCTCTGGATTT...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGCTCACCCTGCACTTCTaGATCTGGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLLTLHF*IWVHSA
Trigger: AGCCGAGTGGACCCAGATGCAGAAGTGCAGGGTGAG...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAAGGCAGATCTCACCCTaGACTTCTGCATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTRQISP*TSASGS
Trigger: GGACCCAGATGCAGAAGTGCAGGGTGAGATCTGCCT...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCAGAGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCACAAATGGGTCAGATGTaGCAGAGATGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ARGQVSLSARLAPAKGLPQMGQM*QRCLWE
Trigger: CTCCCAGAGACATCTCTGGCACATCTGACCCATTTG...TGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCTCCTCTGCTGGCCCCTaGACAGACTCCATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSSSAGP*TDSMSS
Trigger: GCTGCTCATGGAGTCTGTGCAGGGGCCAGCAGAGGA...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGGCCCAGGTCCATCTTaGAGGGATCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVGPGPS*RDPAPC
Trigger: ACATGGAGCTGGATCCCTGCAAGATGGACCTGGGCC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCTGGTCTCCCGCATCTaGTCCTCCGAGAGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVLVSRI*SSESAP
Trigger: AGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCAG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGAGGTTTCCAATGCTCTaGACAGCCTTGGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWRFPML*TALASN
Trigger: GTTGCTTGCCAAGGCTGTGCAGAGCATTGGAAACCT...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCATCCACAGTTCCTTaGCTTGGCCCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGPSTVP*LGPAAG
Trigger: GCCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGG...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGCCCCCGTGCCGTCCTaGGTCACCACCTGCATCACG +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTAPVPS*VTTCIT
Trigger: CGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTTGGGGGCGCTGGCCTTaGGCAAGGCCGAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTWGRWP*ARPRAT
Trigger: AGTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCA...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGCGCCCCAGGAGCAGCTaGCGATACACTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQRPRSS*RYTVWA
Trigger: GGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCG...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCCTGCGTCACCACCTaGCACTCAGGACTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVSCVTT*HSGLLE
Trigger: CTCCAAGAGTCCTGAGTGGCAGGTGGTGACGCAGGA...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS-3UTR GCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTCCAGGCGTGATGGCTTaGACCTGTAGTCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCPGVMA*TCSRSC
Trigger: GCAGCTGCGACTACAGGTGCAAGCCATCACGCCTGG...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTTGGGGACGGGGCACCTaGCATCTCCCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTWGRGT*HLPQLQ
Trigger: CTGGAGCTGCGGGAGATGCCAGGTGCCCCGTCCCCA...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGCTGCTGGAGGGTCTTTaGAGAGAACTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKLLEGL*RELHHA
Trigger: GGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAG...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGGAACCAGCCTTTAGGTaGCTTCTGCTGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWEPAFR*LLLEGL
Trigger: AAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTC...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGAACGGAAGAGGGTGTTaGGGTCCATGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLNGRGC*GPWSEP
Trigger: TGGCTCGGACCATGGACCCCAACACCCTCTTCCGTT...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCACGATGGCGTCCACGATaGGCCCCAGGTAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPRWRPR*APGSPS
Trigger: TGACGGGCTACCTGGGGCCCATCGTGGACGCCATCG...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGCCACTCAGGACTCTTaGAGAAGGAGAGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVATQDS*RRRGSP
Trigger: GGGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGTGTGAGACACGGGGATaGAGTGACACATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWCETRG*SDTSAT
Trigger: AGTGGCAGATGTGTCACTCCATCCCCGTGTCTCACA...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGAGCATCAGGATCCAGTaGGTCACTCCAGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLSIRIQ*VTPVPQ
Trigger: CTGGGGGACTGGAGTGACCCACTGGATCCTGATGCT...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATAGCATCAGGATCCAGTaGGTCACTCCAGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNSIRIQ*VTPVPQ
Trigger: CTGGGGGACTGGAGTGACCCACTGGATCCTGATGCT...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTGCCGATACACTGTCTaGGCCTCAGCATCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETCRYTV*ASASGS
Trigger: GGATCCTGATGCTGAGGCCCAGACAGTGTATCGGCA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTGAACAATTTCAGCCTGAGCTaGTCCCGCCCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGGLWPTVRETPPLFLNNFSLS*SRPRSS
Trigger: GCTGCTCCTGGGGCGGGACCAGCTCAGGCTGAAATT...GTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCCCATGCCCTGAGTTCTaGACTCAAGGCACACAGGAC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTPCPEF*TQGTQD
Trigger: GTCCTGTGTGCCTTGAGTCCAGAACTCAGGGCATGG...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCGGCAACAACATCACATaGGCATCAGGAATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAGNNIT*ASGIQV
Trigger: GACCTGAATTCCTGATGCCCATGTGATGTTGTTGCC...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGACCCCCACCCAGCCTTaGTTCTTCCTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGTPTQP*FFLRAP
Trigger: AGGTGCCCTCAGGAAGAACCAAGGCTGGGTGGGGGT...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp ATTTCTAGCAGACATTCTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTGCTGGTGCTCGGCCTaGGGGAAGCGCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ISSRHSSGWSLAHSQRNSCWCSA*GKRSST
Trigger: AGTGGAGGAGCGCTTCCCCCAGGCCGAGCACCAGCA...GGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCGAGTCAGTAGCTGGCTaGGCCTCAGAAATCTGCATT +
Preference number: 4 (lower is better)
Translates to: RASFTQCKAGPCQRASMPESVAG*ASEICI
Trigger: AATGCAGATTTCTGAGGCCCAGCCAGCTACTGACTC...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCGGAAGCGAGTCTTCTTaGTGGTTGAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTGSESS*WLRSPS
Trigger: GCTTGGAGACCTCAACCATCAAGAAGACTCGCTTCC...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCACCACCTCACGCCGGGTaGGATAGTCCAGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPPPHAG*DSPESA
Trigger: GGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGG...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCAAGCAACAGCAGTaGGCGGCTAGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQGKQQQ*AASLGV
Trigger: GACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCC...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGACGTAGCGCTTCTTaGAGGCAAAGCGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCRRSAS*RQSAWP
Trigger: TGGCCACGCGCTTTGCCTTCAAGAAGCGCTACGTCT...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAACTATCCACTCCAGTCTaGATCAAGCCAGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTELSTPV*IKPEGK
Trigger: CTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAG...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAAAGCCTTGGTTCTTCCTaGGGGCACCTGATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTESLGSS*GHLILE
Trigger: TTCCAGAATCAGGTGCCCTCAGGAAGAACCAAGGCT...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp CCCTCAGATTCTGAGTCAGTAGCTGGCTGGGCCTCAGAAATCTGCATTTCTAGCCAGGCTCCAAGGGTCTaGGTTTGGCACACTGGACCC +
Preference number: 4 (lower is better)
Translates to: PSDSESVAGWASEICISSQAPRV*VWHTGP
Trigger: GGGTCCAGTGTGCCAAACTCAGACCCTTGGAGCCTG...GCTAGAAATGCAGATTTCTGAGGCCCAGCCAGCTACTGACTCAGAATCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCGCCTCGTGGTCCCAGTaGCGCCTGTCCGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAASWSQ*RLSETR
Trigger: CCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGC...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCCGTCTACATGTCACCTaGTTCAAGCCTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVRLHVT*FKPGSL
Trigger: CAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACG...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGAACATTCAGGGAGCTaGTCTTGGCCATGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVEHSGS*SWPWRL
Trigger: TAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGGCAGTAGGGGTCGCTaGTCCCAGACACGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPGSRGR*SQTRPW
Trigger: CCAAGGACGTGTCTGGGAGCAGCGACCCCTACTGCC...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAAGCCCCAAAACACACGTaGAAATGGGTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTEAPKHT*KWVRCA
Trigger: GGCACATCTGACCCATTTGCACGTGTGTTTTGGGGC...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGCCTTTAGGTGGCTTCTaGTGGAGGGTCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKPLGGF*WRVFGE
Trigger: CTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGG...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCAGCAGTGTCCTCCTCTaGTGGCCCCTGCACAGACTC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVSSVLL*WPLHRL
Trigger: GAGTCTGTGCAGGGGCCAGCAGAGGAGGACACTGCT...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCGGCCCAGGTCCATCTTaGAGGGATCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSGPGPS*RDPAPC
Trigger: ACATGGAGCTGGATCCCTGCAAGATGGACCTGGGCC...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAACTCGCCGGTGCAGCTaGTTGAAGGCGAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPTRRCS*LKARRM
Trigger: CATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGT...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCATCCTCCACTCGCCGGTaGAGCTGCTTGAAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPSSTRR*SCLKAR
Trigger: CCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGA...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGGCCCAGGTTTCCAATaGTCTGCACAGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPGPGFQ*SAQPWQ
Trigger: TTGCCAAGGCTGTGCAGAGCATTGGAAACCTGGGCC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCCATCCACAGTTCCTTaGCTTGGCCCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQPSTVP*LGPAAG
Trigger: GCCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGG...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCACACGTGAGACACACTaGAGCAGGAAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSTRETH*SRKGCR
Trigger: CCTGCACCCCTTCCTGCTGCAGTGTGTCTCACGTGT...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTCGCCCCAGGAGCAGCTaGCGATACACTGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTRPRSS*RYTVWA
Trigger: GGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCG...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCGCAGTTGCTGCTCTTTaGCGGGCCAGGACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVAVAAL*RARTSG
Trigger: TCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGC...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGGCACGATCCAGGTCTaGGAGCACCTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTGTIQV*EHLQQA
Trigger: CGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGTGCAAGGCTGGCCCCTaGCAAAGGGCTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQCKAGP*QRASMP
Trigger: GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCA...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGAGTATTAGTGGTGGGTaGGAGGCGTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLSISGG*EASPER
Trigger: TCTCTCTGGCGACGCCTCCCACCCACCACTAATACT...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCACACCTGCTTCAAGCCTaGCTCCCTGCCTCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPHLLQA*LPASWS
Trigger: GGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTG...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCCTCAGGTTCCGAGGCTaGACCAGGGGACGTCTACAT +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSLRFRG*TRGRLH
Trigger: ATGTAGACGTCCCCTGGTCCAGCCTCGGAACCTGAG...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGAGCTGCTCTTGGCCATaGCGCCTAGCCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: SETQREINSLAQGLPGSKSCSWP*RLATNF
Trigger: AAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCT...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCTGCACTTCTGCATCTaGGTCCACTCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETLHFCI*VHSAQV
Trigger: AACTTGAGCCGAGTGGACCCAGATGCAGAAGTGCAG...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAAGAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCAAACACACGTGCAAATaGGTCAGATGTGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KEVQGDRRLPGQDALKRAKHTCK*VRCARD
Trigger: ATCTCTGGCACATCTGACCCATTTGCACGTGTGTTT...GGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGAGGTCTCCAAGCTCTaGCTGCCCCAAAACACACGT +
Preference number: 4 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPEVSKL*LPQNTR
Trigger: ACGTGTGTTTTGGGGCAGCCAGAGCTTGGAGACCTC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATGAGGTCTCCAAGCTCTaGCTGCCCCAAAACACACGT +
Preference number: 4 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNEVSKL*LPQNTR
Trigger: ACGTGTGTTTTGGGGCAGCCAGAGCTTGGAGACCTC...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCAATCCTCCTCGGCTCTaGGAAAGGGCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVNPPRL*ERAGGG
Trigger: TCCGCCTCCTGCCCTTTCCCAGAGCCGAGGAGGATT...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTGGGTGTTGGGGTCCATaGTCCGAGCCACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVGCWGP*SEPPHA
Trigger: GGCGTGAGGTGGCTCGGACCATGGACCCCAACACCC...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAAACGGAAGAGGGTGTTaGGGTCCATGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVNGRGC*GPWSEP
Trigger: TGGCTCGGACCATGGACCCCAACACCCTCTTCCGTT...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAACGGAAGAGGGTGTTaGGGTCCATGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCNGRGC*GPWSEP
Trigger: TGGCTCGGACCATGGACCCCAACACCCTCTTCCGTT...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQSERLV*GSACWS
Trigger: GGACCAACACGCGGACCCCCAGACTAGCCGCTCACT...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGAGCATCAGGATCCAGTaGGTCACTCCAGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGSIRIQ*VTPVPQ
Trigger: CTGGGGGACTGGAGTGACCCACTGGATCCTGATGCT...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTGCCGATACACTGTCTaGGCCTCAGCATCAGGATCC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVCRYTV*ASASGS
Trigger: GGATCCTGATGCTGAGGCCCAGACAGTGTATCGGCA...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCAATTTCAGCCTGAGCTaGTCCCGCCCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVNFSLS*SRPRSS
Trigger: GCTGCTCCTGGGGCGGGACCAGCTCAGGCTGAAATT...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTCATTCCCCAGGCCTGTaGTCCTCAAAGCTGATACTC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSHSPGL*SSKLIL
Trigger: GAGTATCAGCTTTGAGGACCACAGGCCTGGGGAATG...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGTCAAGGGAGGGGCCTTaGACATCCCCTTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLSREGP*TSPSIS
Trigger: CGAGATGGAAGGGGATGTTCAAGGCCCCTCCCTTGA...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGCGAGATCTTGCCGATaGTGTCGTCGTGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQARSCR*CRRARQ
Trigger: CTGTCGGGCACGACGACATCATCGGCAAGATCTCGC...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGGCAAGCAACAGCAGTaGGCGGCTAGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTGKQQQ*AASLGV
Trigger: GACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGAGAAGTCTCTCACACGTaGGACACACTGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYREVSHT*DTLQQE
Trigger: TTCCTGCTGCAGTGTGTCTCACGTGTGAGAGACTTC...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCGACACGGGGATGGAGTaGCACATCTGCCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVDTGME*HICHSG
Trigger: TCCTGAGTGGCAGATGTGTCACTCCATCCCCGTGTC...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCAGGGCTTCCATGCCCTaGGTTCTGGACTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVRASMP*VLDSRH
Trigger: GTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCT...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGCTATCCACTCCAGTCTaGATCAAGCCAGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VPIWGNNITWASGIQVQLLSTPV*IKPEGK
Trigger: CTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAG...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTGAAAACAGGAAGGAGTaGGGCCATTTAGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSENRKE*GHLVPI
Trigger: GATGGGCACTAAATGGCCTCACTCCTTCCTGTTTTC...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGACTTCCTGAGGGCACCTaGTTCTGGAAGCTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRLPEGT*FWKLVV
Trigger: AACCACAAGCTTCCAGAATCAGGTGCCCTCAGGAAG...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGAACATTCAGGGAGCTaGTCTTGGCCATGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVEHSGS*SWPWRL
Trigger: TAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTC...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTGAACGAACATTCAGGGAGCTaGTCTTGGCCATGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: LAGGLWPTVRETPPLFLNEHSGS*SWPWRL
Trigger: TAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTC...GTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACACAAATGGGTCAGATGTaGCAGAGATGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTQMGQM*QRCLWE
Trigger: CTCCCAGAGACATCTCTGGCACATCTGACCCATTTG...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGAAGCACTTCATCCCAGTaGGGGAAGCGAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRSTSSQ*GKRVFL
Trigger: CAAGAAGACTCGCTTCCCGCACTGGGATGAAGTGCT...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGACCAAGAAGTCATTCTTaGCCACCATGTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRPRSHS*PPCPSP
Trigger: GGGACTGGGACATGGTGGGCAAGAATGACTTCTTGG...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGACCTTTAGGTGGCTTCTaGTGGAGGGTCTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRPLGGF*WRVFGE
Trigger: CTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGG...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCATCCTCTGCTGGCCCCTaGACAGACTCCATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPSSAGP*TDSMSS
Trigger: GCTGCTCATGGAGTCTGTGCAGGGGCCAGCAGAGGA...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTAGGTTTCCAATGCTCTaGACAGCCTTGGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSRFPML*TALASN
Trigger: GTTGCTTGCCAAGGCTGTGCAGAGCATTGGAAACCT...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCTGTGCAGCGCCCCCGTaGCGTCCTGCGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQACAAPP*RPASPP
Trigger: AGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACA...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCACAGGCCCCTGTGTCTaGCTCCAGAGTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVTGPCV*LQSCIH
Trigger: ATGGATACAACTCTGGAGGCAGACACAGGGGCCTGT...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGTTGCTGCTCTTTaGCGGGCCAGGACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPAVAAL*RARTSG
Trigger: TCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGC...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTTCACATCCTGCTGGTaGTCGGCCTGGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVFTSCW*SAWGKR
Trigger: GCGCTTCCCCCAGGCCGAGCACCAGCAGGATGTGAA...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCGGGTCGCATGTTCCCTaGGGGTCCGTTCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVGSHVP*GSVQSQ
Trigger: TTGACTCTGAACGGACCCCCAGGGAACATGCGACCC...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCAGCTGCTCTTGGCCATaGCGCCTAGCCACAAACTTT +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVSCSWP*RLATNF
Trigger: AAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCT...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCTCCCAGACACGTCCTTaGCAGGCAGCGCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQASQTRP*QAARGP
Trigger: AGGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGA...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCCTGCACTTCTGCATCTaGGTCCACTCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVLHFCI*VHSAQV
Trigger: AACTTGAGCCGAGTGGACCCAGATGCAGAAGTGCAG...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTAAGGTCAAACAGCTTTaGGGTAAGGATGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KFHSVQGWPLPKGFHALSKVKQL*GKDGRC
Trigger: GCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTT...ACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGTGGGGGTCCGCGTGTTaGTCCCGAAGGTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQWGSAC*SRRSNS
Trigger: GCTGTTTGACCTTCGGGACCAACACGCGGACCCCCA...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTTGCTCTGCACAGCCTTaGCAAGCAACAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCCSAQP*QATAVS
Trigger: GCTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCA...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCGGAAGGCACCGGGGTaGCAGGCGGCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQARKAPG*QAASLF
Trigger: GAACAAGCTGGCCGCCTGCCACCCCGGTGCCTTCCG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGACTGGCCTCCTTGGTATaGATAGAGGCCAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLILEACGWSPRPRAGYRLASLV*IEASLV
Trigger: CACCAAACTGGCCTCTATCCATACCAAGGAGGCCAG...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCACTCCAGCATCTGCACTaGCAGGCAGATCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPLQHLH*QADLTL
Trigger: CAGGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAG...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTTGAACGGAAGCGAGTCTTCTTaGTGGTTGAGGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LAGGLWPTVRETPPLFLNGSESS*WLRSPS
Trigger: GCTTGGAGACCTCAACCATCAAGAAGACTCGCTTCC...GTTCAAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp GAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTAGAAGAGAAATCCACTaGTGGCCAGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: ETQREINSLAQGLPGSKGRREIH*WPGTSH
Trigger: ATGTGAAGTACCTGGCCATCAGTGGATTTCTCTTCT...ACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTGAAGTCTCTCACACGTaGGACACACTGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCEVSHT*DTLQQE
Trigger: TTCCTGCTGCAGTGTGTCTCACGTGTGAGAGACTTC...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATGCTGCAGCCGGCGGCTaGGCGCTCAGCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHAAAGG*ALSLEA
Trigger: TGCCTCCAGGCTGAGCGCTCAGCCGCCGGCTGCAGC...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTCCAGTAATTTCAGCCTaGGCTGGTCCCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVPVISA*AGPAPG
Trigger: TCCTGGGGCGGGACCAGCTCAGGCTGAAATTACTGG...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGAAATCCAGAGGCAGGTaGACCGTGTACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQKSRGR*TVYSSP
Trigger: GGGGGAGGAGTACACGGTGCACCTGCCTCTGGATTT...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGAGGCAGATCTCACCCTaGACTTCTGCATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQRQISP*TSASGS
Trigger: GGACCCAGATGCAGAAGTGCAGGGTGAGATCTGCCT...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAAGAAGTCATTCTTaGCCACCATGTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGPRSHS*PPCPSP
Trigger: GGGACTGGGACATGGTGGGCAAGAATGACTTCTTGG...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCGAGAGAACTCCACCATaGCCAAGAAGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTERTPP*PRSHSC
Trigger: GCAAGAATGACTTCTTGGGCATGGTGGAGTTCTCTC...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCGAGAGAACTCCACCATaGCCAAGAAGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETERTPP*PRSHSC
Trigger: GCAAGAATGACTTCTTGGGCATGGTGGAGTTCTCTC...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTACTTCACATCCTGGTaGTCGGCCTGGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVYFTSW*SAWGKR
Trigger: GCGCTTCCCCCAGGCCGAGCACCAGGATGTGAAGTA...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000446861.7
CDS-3UTR GCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGGTAAGGATGGCAGGTaGGAAGAATCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVGKDGR*EESQEE
Trigger: CTCTTCTTGCGATTCTTCGCACCTGCCATCCTTACC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGGGCCCAGGTTTCCAATaGTCTGCACAGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLGPGFQ*SAQPWQ
Trigger: TTGCCAAGGCTGTGCAGAGCATTGGAAACCTGGGCC...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCAGCAGGCGGGCAGTTaGTGCTCTTTGCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAQQAGS*CSLPGQ
Trigger: CTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCGGCACGATCCAGGTCTaGGAGCACCTCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAGTIQV*EHLQQA
Trigger: CGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCC...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCCCCCTGGCTCTTaGTCCTCCTTCCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARGPPGS*SSFRAS
Trigger: GCTAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCC...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGAGTATTAGTGGTGGGTaGGAGGCGTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLSISGG*EASPER
Trigger: TCTCTCTGGCGACGCCTCCCACCCACCACTAATACT...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCTGCTGGAGGGTCTTTaGAGAGAACTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVLLEGL*RELHHA
Trigger: GGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGGAACCAGCCTTTAGGTaGCTTCTGCTGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGEPAFR*LLLEGL
Trigger: AAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTC...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGACCACGGAGCCCACGATaGCGTCCACGATGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARPRSPR*RPRWAP
Trigger: TGGGGCCCATCGTGGACGCCATCGTGGGCTCCGTGG...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCTGCTCTGCACAGCCTTaGCAAGCAACAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVCSAQP*QATAVS
Trigger: GCTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCA...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGTGCCGATACACTGTCTaGGCCTCAGCATCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQCRYTV*ASASGS
Trigger: GGATCCTGATGCTGAGGCCCAGACAGTGTATCGGCA...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTGCTGGAACTCCTCGTaGGCACGATCCAGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVCWNSS*ARSRSA
Trigger: CGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCA...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCCATGCCCTGAGTTCTaGACTCAAGGCACACAGGAC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVPCPEF*TQGTQD
Trigger: GTCCTGTGTGCCTTGAGTCCAGAACTCAGGGCATGG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATTCCCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACCATGCCCTGAGTTCTaGACTCAAGGCACACAGGAC +
Preference number: 4 (lower is better)
Translates to: CPFPRPVVLKADTHPNDLPCPEF*TQGTQD
Trigger: GTCCTGTGTGCCTTGAGTCCAGAACTCAGGGCATGG...TAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGGGAATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTACTGGCCTCCTTGGTATaGATAGAGGCCAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVLASLV*IEASLV
Trigger: CACCAAACTGGCCTCTATCCATACCAAGGAGGCCAG...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTACCCCCACCCAGCCTTaGTTCTTCCTGAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVTPTQP*FFLRAP
Trigger: AGGTGCCCTCAGGAAGAACCAAGGCTGGGTGGGGGT...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGTACTTCACATCCTGCTaGTGCTCGGCCTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQYFTSC*CSAWGK
Trigger: CTTCCCCCAGGCCGAGCACCAGCAGGATGTGAAGTA...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTAGACATTCTAGCGGGTaGTCTTTGGCCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCRHSSG*SLAHSQ
Trigger: CTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCT...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCCACCTCACGCCGGGTaGGATAGTCCAGAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAPPHAG*DSPESA
Trigger: GGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp CTTGCACCTGTAGTCGCAGCTGCTCTGGAGGCTAACGTGGGAGGATCACTGAAGAGAAGAGAAATCCACTaGTGGCCAGGTACTTCACAT +
Preference number: 4 (lower is better)
Translates to: LAPVVAAALEANVGGSLKRREIH*WPGTSH
Trigger: ATGTGAAGTACCTGGCCATCAGTGGATTTCTCTTCT...CTTCAGTGATCCTCCCACGTTAGCCTCCAGAGCAGCTGCGACTACAGGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCGGCAAGCAACAGCAGTaGGCGGCTAGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAGKQQQ*AASLGV
Trigger: GACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCC...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATTTCTAGCAGACATTCTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCCGTCTACATGTCACCTaGTTCAAGCCTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ISSRHSSGWSLAHSQRNSRLHVT*FKPGSL
Trigger: CAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACG...GGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp CCCTCAGATTCTGAGTCAGTAGCTGGCTGGGCCTCAGAAATCTGCATTTCTAGCGCCCCAAAACACACGTaGAAATGGGTCAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: PSDSESVAGWASEICISSAPKHT*KWVRCA
Trigger: GGCACATCTGACCCATTTGCACGTGTGTTTTGGGGC...GCTAGAAATGCAGATTTCTGAGGCCCAGCCAGCTACTGACTCAGAATCTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCCAAGAAGTCATTCTTaGCCACCATGTCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVPRSHS*PPCPSP
Trigger: GGGACTGGGACATGGTGGGCAAGAATGACTTCTTGG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGTGGGAGCCAGGTCCCTaGCCTGAAGCACATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRWEPGP*PEAHGS
Trigger: GCTGCCATGTGCTTCAGGCCAGGGACCTGGCTCCCA...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTAGAGTTTCACCAGCTTaGTGGCAAGGTCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTRVSPA*WQGPGG
Trigger: GCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCT...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAAGGTCAAACAGCTTTaGGGTAAGGATGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSKVKQL*GKDGRC
Trigger: GCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTT...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGACCACCTGCATCACGTaGGGCAGTTGGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRTTCIT*GSWKAP
Trigger: GGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGT...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCGGCAACAACATCACATaGGCATCAGGAATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVGNNIT*ASGIQV
Trigger: GACCTGAATTCCTGATGCCCATGTGATGTTGTTGCC...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCTAGCGGGTGGTCTTTaGCCCACAGTCAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVLAGGL*PTVRET
Trigger: AGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGATCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARSSPPG*QLSVYG
Trigger: GCCGTACACACTCAGCTGTCACCCTGGGGGACTGGA...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTAGGCAGATCTCACCCTaGACTTCTGCATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVRQISP*TSASGS
Trigger: GGACCCAGATGCAGAAGTGCAGGGTGAGATCTGCCT...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTGGCCCAGGTTTCCAATaGTCTGCACAGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVGPGFQ*SAQPWQ
Trigger: TTGCCAAGGCTGTGCAGAGCATTGGAAACCTGGGCC...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCGCTCATTCACATTCTTaGACTGGAGGTAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSAHSHS*TGGRWC
Trigger: ACACCACCTACCTCCAGTGCAAGAATGTGAATGAGC...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAACAGGCCCCTGTGTCTaGCTCCAGAGTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPTGPCV*LQSCIH
Trigger: ATGGATACAACTCTGGAGGCAGACACAGGGGCCTGT...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGACAGGCCCCTGTGTCTaGCTCCAGAGTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: NNITWASGIQVQLYPAAQTGPCV*LQSCIH
Trigger: ATGGATACAACTCTGGAGGCAGACACAGGGGCCTGT...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGTTCCCTCGCTCCTGCTaGTGGAACTCCTCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRFPRSC*WNSSWA
Trigger: TGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAA...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGAGGTCTCCAAGCTCTaGCTGCCCCAAAACACACGT +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTEVSKL*LPQNTR
Trigger: ACGTGTGTTTTGGGGCAGCCAGAGCTTGGAGACCTC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCTGGGGGTCCGCGTGTTaGTCCCGAAGGTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAWGSAC*SRRSNS
Trigger: GCTGTTTGACCTTCGGGACCAACACGCGGACCCCCA...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGCCTTCTCGAACAATaGCCGAGGGCGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQASLLEQ*PRAGTG
Trigger: CCCTGTTCCCGCCCTCGGCCATTGTTCGAGAAGGCT...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCACTCAGTGCAAGGCTaGCCCCTGCCAAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAHSVQG*PLPKGF
Trigger: GAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR TCA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTTATACAGGGTAATCTaGGACCCAGAGAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETLYRVI*DPERDK
Trigger: TTTATCTCTCTCTGGGTCTCAGATTACCCTGTATAA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR TCA 90 bp GGGAGGATCACTGAAGTCCAGAAGTTTGAGGGTGCACTGACCTATGATCATGCCCTCCTCCCTTGTTCTTaGACTACCTCATTGGAATCC +
Preference number: 4 (lower is better)
Translates to: GRITEVQKFEGALTYDHALLPCS*TTSLES
Trigger: GGATTCCAATGAGGTAGTTCAAGAACAAGGGAGGAG...GGCATGATCATAGGTCAGTGCACCCTCAAACTTCTGGACTTCAGTGATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR GCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGAAATCCAGAGGCAGGTaGACCGTGTACTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRKSRGR*TVYSSP
Trigger: GGGGGAGGAGTACACGGTGCACCTGCCTCTGGATTT...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCTCACCCTGCACTTCTaGATCTGGGTCCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQALTLHF*IWVHSA
Trigger: AGCCGAGTGGACCCAGATGCAGAAGTGCAGGGTGAG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAAGGTTTCCAATGCTCTaGACAGCCTTGGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPRFPML*TALASN
Trigger: GTTGCTTGCCAAGGCTGTGCAGAGCATTGGAAACCT...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCACACGTGAGACACACTaGAGCAGGAAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQATRETH*SRKGCR
Trigger: CCTGCACCCCTTCCTGCTGCAGTGTGTCTCACGTGT...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTAATAACCCTGATTCTTaGCTTCATATACCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSNNPDS*LHIPSD
Trigger: ATCTGAGGGTATATGAAGGCAAGAATCAGGGTTATT...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTCTGCACTTCTGCATCTaGGTCCACTCGGCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTLHFCI*VHSAQV
Trigger: AACTTGAGCCGAGTGGACCCAGATGCAGAAGTGCAG...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp CAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGAAACACACGTGCAAATaGGTCAGATGTGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: QHHMGIRNSGPAVSSSSGKHTCK*VRCARD
Trigger: ATCTCTGGCACATCTGACCCATTTGCACGTGTGTTT...CCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGTTTCACCAGCTTGGTaGCAAGGTCCTGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRVSPAW*QGPGGS
Trigger: ACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAAC...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAAAGGTCAAACAGCTTTaGGGTAAGGATGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IWGNNITWASGIQVQLYPKVKQL*GKDGRC
Trigger: GCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTT...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGGGCAACAACATCACATaGGCATCAGGAATTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LVPIWGNNITWASGIQVQGNNIT*ASGIQV
Trigger: GACCTGAATTCCTGATGCCCATGTGATGTTGTTGCC...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGGTAAGGATGGCAGGTaGGAAGAATCGCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTGKDGR*EESQEE
Trigger: CTCTTCTTGCGATTCTTCGCACCTGCCATCCTTACC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGTTTCACCAGCTTGGTaGCAAGGTCCTGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARVSPAW*QGPGGS
Trigger: ACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAAC...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAAGAGTTTCACCAGCTTaGTGGCAAGGTCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARRVSPA*WQGPGG
Trigger: GCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCT...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATCCTCGCTCCTGCTGCTaGAACTCCTCGTGGGCACGA +
Preference number: 4 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHPRSCC*NSSWAR
Trigger: TCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGG...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCGAGACCCGGGTAGCTaGATGGGAGATTTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQARDPGS*MGDFRK
Trigger: CTTTCGGAAATCTCCCATCCAGCTACCCGGGTCTCG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446861.7
3UTR CAA 72 bp ATCTGCATTTCTAGCAGACATTCTAGCGGGTGGTCTTaGGCCCACAGTCAGAGAAACTCCTCCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ICISSRHSSGWS*AHSQRNSSLVL
Trigger: AAGAACAAGGGAGGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAATGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR TCA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCTTCCTGAGGGCACCTaGTTCTGGAAGCTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSQISQVPYPIHSSLNQALPEGT*FWKLVV
Trigger: AACCACAAGCTTCCAGAATCAGGTGCCCTCAGGAAG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR GCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGAGCACTTCATCCCAGTaGGGGAAGCGAGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRSTSSQ*GKRVFL
Trigger: CAAGAAGACTCGCTTCCCGCACTGGGATGAAGTGCT...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGAGAGAACTCCACCATaGCCAAGAAGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTERTPP*PRSHSC
Trigger: GCAAGAATGACTTCTTGGGCATGGTGGAGTTCTCTC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTGCTCATTCACATTCTTaGACTGGAGGTAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSLSYPLQSESSQRASFTAHSHS*TGGRWC
Trigger: ACACCACCTACCTCCAGTGCAAGAATGTGAATGAGC...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATAGCCTTCTCGAACAATaGCCGAGGGCGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHSLLEQ*PRAGTG
Trigger: CCCTGTTCCCGCCCTCGGCCATTGTTCGAGAAGGCT...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp TCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGACCCGGGTAGCTGGATaGGAGATTTCCGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SNKSGSLSYPLQSESSQRTRVAG*EISERG
Trigger: TCCTCTTTCGGAAATCTCCCATCCAGCTACCCGGGT...CCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS-3UTR TCA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATGACACGGGGATGGAGTaGCACATCTGCCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHDTGME*HICHSG
Trigger: TCCTGAGTGGCAGATGTGTCACTCCATCCCCGTGTC...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTAAACACACGTGCAAATaGGTCAGATGTGCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVKHTCK*VRCARD
Trigger: ATCTCTGGCACATCTGACCCATTTGCACGTGTGTTT...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGAACCAGCCTTTAGGTaGCTTCTGCTGGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQAREPAFR*LLLEGL
Trigger: AAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTC...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR GCA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGACAAATGGGTCAGATGTaGCAGAGATGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQISQVPYPIHSSLNQARQMGQM*QRCLWE
Trigger: CTCCCAGAGACATCTCTGGCACATCTGACCCATTTG...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS TCA 90 bp GCTCGGCCTGGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTGCTTaGAGGCGAGGCGCATGGCGGGCGGGCAGCGCCCCACGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ARPGGSAPPLAGAAA*RRGAWRAGSAPRSP
Trigger: TGGGCTCCGTGGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCCAGGCCGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS GCA 90 bp TGGTGCTCGGCCTGGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTaGTTGAAGGCGAGGCGCATGGCGGGCGGGCAGCGCCCCACGGAG +
Preference number: 5 (lower is better)
Translates to: WCSAWGKRSSTRRCS*LKARRMAGGQRPTE
Trigger: CTCCGTGGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCCAGGCCGAGCACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS CCA 90 bp GTGTGCAGCGCCCCCGTGCCGTCCTGCGTCACCACCTGCATCACGTaGGGCAGTTGGAAGGCGCCCTCGTCTACGCGCTCCACGGCGCGG +
Preference number: 5 (lower is better)
Translates to: VCSAPVPSCVTTCIT*GSWKAPSSTRSTAR
Trigger: CCGCGCCGTGGAGCGCGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS-3UTR CAA 90 bp GAGGTCCAAGGAGACAGGAGACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCGGGCGCAGCGGGCTCTaGCCGAGGCGTCTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: EVQGDRRLPGQDALKRAPGRSGL*PRRLEL
Trigger: GAGCTCCAGACGCCTCGGCAAGAGCCCGCTGCGCCC...GGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGTCTCCTGTCTCCTTGGACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446861.7
CDS GCA 90 bp GGCACGATCCAGGTCTGCGAGCACCTCCAGCAGGCGGGCAGTTGCTaGTCTTTGCCGGGCCAGGACCTCAGGACAGGCCCCTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GTIQVCEHLQQAGSC*SLPGQDLRTGPCVC
Trigger: GCAGACACAGGGGCCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS GCA 90 bp CCCTCGCTCCTGCTGCTGGAACTCCTCGTGGGCACGATCCAGGTCTaGGAGCACCTCCAGCAGGCGGGCAGTTGCTGCTCTTTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PSLLLLELLVGTIQV*EHLQQAGSCCSLPG
Trigger: GCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CCA 90 bp CCGAGGCTGGACCAGGGGACGTCTACATGTCACCTGCTTCAAGCCTaGCTCCCTGCCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGG +
Preference number: 5 (lower is better)
Translates to: PRLDQGTSTCHLLQA*LPASWSQCRLSETR
Trigger: CCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCCAGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACCTCCCAGACACGTCCTaGGCAGGCAGCGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHLPDTS*AGSARP
Trigger: GGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGAG...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS TCA 90 bp GGGCCTCAGCATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGCTGCAGCCGGCGGCTGAGCGCTCAG +
Preference number: 5 (lower is better)
Translates to: GPQHQDPVGHSSPPG*QLSVYGCSRRLSAQ
Trigger: CTGAGCGCTCAGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATGCTGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS TCA 90 bp GGGCCTCAGCATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGCTGCAGCCGGCGGCCCCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: GPQHQDPVGHSSPPG*QLSVYGCSRRPHLP
Trigger: TGGGAGATGGGGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATGCTGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS GCA 90 bp GGACCAGGGGACGTCTACATGTCACCTGCTTCAAGCCTGGCTCCCTaGCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GPGDVYMSPASSLAP*LVVPVPPVRDPGSW
Trigger: CCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 90 bp GGACCAGGGGACGTCTACATGTCACCTGCTTCAAGCCTGGCTCCCTaGCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GPGDVYMSPASSLAP*LVVPVPPVRDPGSS
Trigger: GGAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CAA 90 bp ACTCCCGGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCTTCAGGGAGCTGCTCTaGGCCATGGCGCCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: TPGAGCAEEGPLALAPPSFRELL*AMAPSH
Trigger: GTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAA...GGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCCGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS GCA 90 bp GGACCAGGGGACGTCTACATGTCACCTGCTTCAAGCCTGGCTCCCTaGCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCATG +
Preference number: 5 (lower is better)
Translates to: GPGDVYMSPASSLAP*LVVPVPPVRDPGSM
Trigger: CATGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000418411.6
CDS GCA 90 bp GCGCTCAGGTTCCGAGGCTGGACCAGGGGACGTCTACATGTCACCTaGTTCAAGCCTGGCTCCCTGCCTCGTGGTCCCAGTGCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: ALRFRGWTRGRLHVT*FKPGSLPRGPSAAC
Trigger: ACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCCAGCCTCGGAACCTGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 90 bp AGCCTGAGCTGGTCCCGCCCCAGGAGCAGCTGCCGATACACTGTCTaGGCCTCAGCATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLSWSRPRSSCRYTV*ASASGSSGSLQSPR
Trigger: CCTGGGGGACTGGAGTGACCCACTGGATCCTGATGCTGAGGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCGGGACCAGCTCAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CCA 90 bp CCACTGGAATCTCAAACGTCTCATCTTGGCACTGAGCGCTCAGCCTaGAGGCAGCAGGTCCAGCGCGCGCTGCGGAAGGCACCGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PLESQTSHLGTERSA*RQQVQRALRKAPGW
Trigger: CCACCCCGGTGCCTTCCGCAGCGCGCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCAGTGCCAAGATGAGACGTTTGAGATTCCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418411.6
CDS CCA 90 bp GCCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTGGATaGGAGATTTCCGAAAGAGGAGAAGGTGTAGGTGCCCGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ASWSQCRLSETRVAG*EISERGEGVGARGG
Trigger: CCCTCCCCGGGCACCTACACCTTCTCCTCTTTCGGAAATCTCCCATCCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 90 bp CCCTGCCTCGTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTaGATGGGAGATTTCCGAAAGAGGAGAAGGTGTAGGTGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PCLVVPVPPVRDPGS*MGDFRKRRRCRCPG
Trigger: CCCCGGGCACCTACACCTTCTCCTCTTTCGGAAATCTCCCATCCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTCGCCGGTGCAGCTGCTaGAAGGCGAGGCGCATGGCG +
Preference number: 5 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPRRCSC*KARRMA
Trigger: CGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCG...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCGCCAGCTTGTTCGGGTaGGGGGCGCTGGCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: RASFTQCKAGPCQRASMPASLFG*GALALR
Trigger: GCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGC...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACCCAGCAGGCGGGCAGTaGCTGCTCTTTGCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHPAGGQ*LLFAGP
Trigger: TGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGG...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS GCA 90 bp TGGCAGGCAGCGCGCGGCCCTCCACCACGCGAACATTCAGGGAGCTaGTCTTGGCCATGGCGCCTAGCCACAAACTTTCCAGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: WQAARGPPPREHSGS*SWPWRLATNFPGRR
Trigger: CCTTCTGCCTGGAAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTCGCGTGGTGGAGGGCCGCGCGCTGCCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAACTCCCAGACACGTCCTaGGCAGGCAGCGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GLKAHRTRHVSGSLQTTELPDTS*AGSARP
Trigger: GGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGAG...TTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS TCA 90 bp GGAAGAGGGTGTTGGGGTCCATGGTCCGAGCCACCTCACGCCGGGTaGGATAGTCCAGAAAGCGCCCAGCCAGTCCCCGGCCAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GRGCWGPWSEPPHAG*DSPESAQPVPGQER
Trigger: TCTTTCTTGGCCGGGGACTGGCTGGGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGGCTCGGACCATGGACCCCAACACCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS TCA 90 bp AGCATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGGGTGACAGCTaGGTGTGTACGGCTGCAGCCGGCGGCCCCATCTCCCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SIRIQWVTPVPQGDS*VCTAAAGGPISQFC
Trigger: ACAGAACTGGGAGATGGGGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS CCA 90 bp AGCGCCCAGCCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTTGGTaGCAAGGTCCTGGCGGCAGTCCCCCAAGGTCAGCTCTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SAQPVPGQERVSPAW*QGPGGSPPRSALPA
Trigger: TGCTGGAAGAGCTGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTGGGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 90 bp CCTTGGCCCAGCTGCTGGCCCAGGTTTCCAATGCTCTGCACAGCCTaGAGCAAAGAAGCGAGGGATGCCGGGGCCAAGGTCACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: PWPSCWPRFPMLCTA*SKEARDAGAKVTAE
Trigger: CTCTGCTGTGACCTTGGCCCCGGCATCCCTCGCTTCTTTGCTCCAGGCTGTGCAGAGCATTGGAAACCTGGGCCAGCAGCTGGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS-3UTR CAA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTGGCAGGCGGCCAGCTaGTTCGGGTTGGGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETWQAAS*FGLGAL
Trigger: CAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS TCA 90 bp GGGTCAGAGGCATCCACTGGAATCTCAAACGTCTCATCTTGGCACTaGGCGCTCAGCCTGGAGGCAGCAGGTCCAGCGCGCGCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: GSEASTGISNVSSWH*ALSLEAAGPARAAE
Trigger: TTCCGCAGCGCGCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCAGTGCCAAGATGAGACGTTTGAGATTCCAGTGGATGCCTCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418411.6
CDS GCA 90 bp AGCACATGGCAGCGAAGGCAGCGGCCCTGCCCATCCTCCAGCATCTaGACTGACAGGCAGATCTCACCCTGCACTTCTGCATCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: STWQRRQRPCPSSSI*TDRQISPCTSASGS
Trigger: GGACCCAGATGCAGAAGTGCAGGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAGGATGGGCAGGGCCGCTGCCTTCGCTGCCATGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 90 bp CATTCACATTCTTGCACTGGAGGTAGGTGGTGTGCAGCGCCCCCGTaGCGTCCTGCGTCACCACCTGCATCACGTGGGGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: HSHSCTGGRWCAAPP*RPASPPASRGAVGR
Trigger: CCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACACCACCTACCTCCAGTGCAAGAATGTGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 90 bp GAAAGCGCCCAGCCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTTaGTGGCAAGGTCCTGGCGGCAGTCCCCCAAGGTCAGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: ESAQPVPGQERVSPA*WQGPGGSPPRSALP
Trigger: TGGAAGAGCTGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTGGGCGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTCTGGGGGTCCGCGTGTaGGTCCCGAAGGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPLGVRV*VPKVKQ
Trigger: CTGTTTGACCTTCGGGACCAACACGCGGACCCCCAG...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGGCCATCCACAGTTCCTaGCCTTGGCCCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWAIHSS*PWPSCW
Trigger: CCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGC...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAGAATTTGGGGGCGCTGGCCTaGCGCAAGGCCGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: DSRHTGLGTSLGASKPQNLGALA*RKAESH
Trigger: GTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAA...ATTCTGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCATTGGGGGCGCTGGCCTaGCGCAAGGCCGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPLGALA*RKAESH
Trigger: GTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAA...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCTGGCAGTTGCTGCTCTTaGCCGGGCCAGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: DPERDKQPGPRSPRLQGSGSCCS*PGQDLR
Trigger: CCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCC...AGACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS CCA 90 bp AGTCCCCGGCCAAGAAAGAGTTTCACCAGCTTGGTGGCAAGGTCCTaGCGGCAGTCCCCCAAGGTCAGCTCTTCCAGCAAAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPRPRKSFTSLVARS*RQSPKVSSSSKAKG
Trigger: CCCCTTGGCTTTGCTGGAAGAGCTGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGCGGCCCAGGTCCATCTaGCAGGGATCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWRPRSI*QGSSSM
Trigger: CATGGAGCTGGATCCCTGCAAGATGGACCTGGGCCG...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTACGCCGGTGCAGCTGCTaGAAGGCGAGGCGCATGGCG +
Preference number: 5 (lower is better)
Translates to: AHLGQQHHMGIRNSGPAVRRCSC*KARRMA
Trigger: CGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCG...TACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGTCATCACGTGGGGCAGTaGGAAGGCGCCCTCGTCTAC +
Preference number: 5 (lower is better)
Translates to: ETQREINSLAQGLPGSKGHHVGQ*EGALVY
Trigger: GTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATG...ACCCTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS CCA 90 bp TTGGCAAGCAACAGCAGTGAGCGGCTAGTCTGGGGGTCCGCGTGTTaGTCCCGAAGGTCAAACAGCTTTGGGGTAAGGATGGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: LASNSSERLVWGSAC*SRRSNSFGVRMAGA
Trigger: CGCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCTTCAGGGAGCTGCTCTaGGCCATGGCGCCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETFRELL*AMAPSH
Trigger: GTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAA...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGTTCAGGGAGCTGCTCTaGGCCATGGCGCCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: SETQREINSLAQGLPGSKFRELL*AMAPSH
Trigger: GTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAA...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACTCTGCTGGAGGGTCTTaGGAGAGAACTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHSAGGS*ERTPPC
Trigger: GCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGA...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCGAACGGAAGAGGGTGTaGGGGTCCATGGTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETERKRV*GSMVRA
Trigger: GGCTCGGACCATGGACCCCAACACCCTCTTCCGTTC...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GGGGCAGGATGCGCTGAAGAGGGCCCCCTGGCTCTTGCTCCTCCTTCCGGGCTAAACTGTTCCATCGACTaGGATGCCAGGGAGTTAGAA +
Preference number: 5 (lower is better)
Translates to: GAGCAEEGPLALAPPSGLNCSID*DARELE
Trigger: TTCTAACTCCCTGGCATCCAAGTCGATGGAACAGTT...TAGCCCGGAAGGAGGAGCAAGAGCCAGGGGGCCCTCTTCAGCGCATCCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGTGCCACTCAGGACTCTaGGAGAAGGAGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWCHSGL*EKERVS
Trigger: GGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGCA...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCGCCAGCTTGTTCGGGTaGGGGGCGCTGGCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVASLFG*GALALR
Trigger: GCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGC...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp ATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGGCCAGGCTGGGCCAGGCTGGCCTCCTaGGTATGGATAGAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: MGIRNSGPAVSSSSGPGWARLAS*VWIEAS
Trigger: ACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGC...CCAGCCTGGCCCTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS CCA 90 bp ATGCTCTGCACAGCCTTGGCAAGCAACAGCAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCCCGAAGGTCAAACAGCTTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: MLCTALASNSSERLV*GSACWSRRSNSFGV
Trigger: TACCCCAAAGCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS-3UTR CAA 90 bp GGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTCCCAAGAAGTCATTCTaGCCCACCATGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GQVSLSARLAPAKGLPCPPKKSF*PTMSQS
Trigger: GGACTGGGACATGGTGGGCAAGAATGACTTCTTGGG...AGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGACGGCCCAGGTCCATCTaGCAGGGATCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: HLILEACGWSPRPRAGYRRPRSI*QGSSSM
Trigger: CATGGAGCTGGATCCCTGCAAGATGGACCTGGGCCG...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp AGGGCAAGTTTCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCATGCTCTGCACAGCCTaGGCAAGCAACAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RASFTQCKAGPCQRASMPMLCTA*ASNSSE
Trigger: CTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCAT...GGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGAAACTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGAGCCATCCACAGTTCCTaGCCTTGGCCCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLILEACGWSPRPRAGYRAIHSS*PWPSCW
Trigger: CCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGC...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCATTGGGGGCGCTGGCCTaGCGCAAGGCCGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: IWGNNITWASGIQVQLYPLGALA*RKAESH
Trigger: GTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAA...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGCCAGCAGGCGGGCAGTaGCTGCTCTTTGCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLPAGGQ*LLFAGP
Trigger: TGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGG...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CAA 90 bp TCACTCAGTGCAAGGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGTCTAGCGGGTGGTCTTaGGCCCACAGTCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: SLSARLAPAKGLPCPEFWSSGWS*AHSQRN
Trigger: GTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGA...CCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCCTTGCACTGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS GCA 90 bp CCCTGCCCATCCTCCAGCATCTGCACTGACAGGCAGATCTCACCCTaGACTTCTGCATCTGGGTCCACTCGGCTCAAGTTAATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PCPSSSICTDRQISP*TSASGSTRLKLIQL
Trigger: CAGCTGGATTAACTTGAGCCGAGTGGACCCAGATGCAGAAGTGCAGGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAGGATGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 90 bp GCTCTGGGAAAGGGCAGGAGGCGGAACCAGCCTTTAGGTGGCTTCTaGTGGAGGGTCTTTGGAGAGAACTCCACCATGCCCAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: ALGKGRRRNQPLGGF*WRVFGENSTMPKKS
Trigger: TGACTTCTTGGGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCCTGCCCTTTCCCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACACTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTLLSEI*PMMSSC
Trigger: GCACGACGACATCATCGGCAAGATCTCGCTGAGCAG...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGTTCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCCTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SSGLKAHRTRHVSGSLQTLLSEI*PMMSSC
Trigger: GCACGACGACATCATCGGCAAGATCTCGCTGAGCAG...GGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACAAAGAGTTTCACCAGCTaGGTGGCAAGGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTKSFTS*VARSWR
Trigger: CCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTT...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTCGCCGGTGCAGCTGCTaGAAGGCGAGGCGCATGGCG +
Preference number: 5 (lower is better)
Translates to: GSLSYPLQSESSQRASFTRRCSC*KARRMA
Trigger: CGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCG...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTCTGGGGGTCCGCGTGTaGGTCCCGAAGGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: CPSGATTSHGHQEFRSSCLGVRV*VPKVKQ
Trigger: CTGTTTGACCTTCGGGACCAACACGCGGACCCCCAG...ACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGTGCCACTCAGGACTCTaGGAGAAGGAGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SETQREINSLAQGLPGSKCHSGL*EKERVS
Trigger: GGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGCA...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS GCA 90 bp TGTACGGCTGCAGCCGGCGGCCCCATCTCCCAGTTCTGTCTCCAATaGCGCTGCTTAACTTCTGCTCTACTCAGGTCACATTTAAGCAGC +
Preference number: 5 (lower is better)
Translates to: CTAAAGGPISQFCLQ*RCLTSALLRSHLSS
Trigger: GCTGCTTAAATGTGACCTGAGTAGAGCAGAAGTTAAGCAGCGGCATTGGAGACAGAACTGGGAGATGGGGCCGCCGGCTGCAGCCGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS CCA 90 bp CTGGGAAAGGGCAGGAGGCGGAACCAGCCTTTAGGTGGCTTCTGCTaGAGGGTCTTTGGAGAGAACTCCACCATGCCCAAGAAGTCATTC +
Preference number: 5 (lower is better)
Translates to: LGKGRRRNQPLGGFC*RVFGENSTMPKKSF
Trigger: GAATGACTTCTTGGGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCCTGCCCTTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCTCCCAGACACGTCCTaGGCAGGCAGCGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQALPDTS*AGSARP
Trigger: GGGCCGCGCGCTGCCTGCCAAGGACGTGTCTGGGAG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TCTGGACTCAAGGCACACAGGACTAGGCACGTCTCTGGGAGCCTCCAAACCACACCCAAGAAGTCATTCTaGCCCACCATGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SGLKAHRTRHVSGSLQTTPKKSF*PTMSQS
Trigger: GGACTGGGACATGGTGGGCAAGAATGACTTCTTGGG...TGTGGTTTGGAGGCTCCCAGAGACGTGCCTAGTCCTGTGTGCCTTGAGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGGAACGGAAGAGGGTGTaGGGGTCCATGGTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: LVPIWGNNITWASGIQVQERKRV*GSMVRA
Trigger: GGCTCGGACCATGGACCCCAACACCCTCTTCCGTTC...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTACGGAATCTGGAACGGAAGAGGGTGTaGGGGTCCATGGTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PRPVVLKADTHPNDLRNLERKRV*GSMVRA
Trigger: GGCTCGGACCATGGACCCCAACACCCTCTTCCGTTC...CAGATTCCGTAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CAA 90 bp GGCTGGCCCCTGCCAAAGGGCTTCCATGCCCTGAGTTCTGGACTCAAGGCACACAACTGTTCCATCGACTaGGATGCCAGGGAGTTAGAA +
Preference number: 5 (lower is better)
Translates to: GWPLPKGFHALSSGLKAHNCSID*DARELE
Trigger: TTCTAACTCCCTGGCATCCAAGTCGATGGAACAGTT...GTGTGCCTTGAGTCCAGAACTCAGGGCATGGAAGCCCTTTGGCAGGGGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TTAGTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCGGCCCAGGTCCATCTaGCAGGGATCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: LVPIWGNNITWASGIQVQRPRSI*QGSSSM
Trigger: CATGGAGCTGGATCCCTGCAAGATGGACCTGGGCCG...CTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCCTGGGGGTCCGCGTGTaGGTCCCGAAGGTCAAACAG +
Preference number: 5 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVLGVRV*VPKVKQ
Trigger: CTGTTTGACCTTCGGGACCAACACGCGGACCCCCAG...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS GCA 90 bp CCTGGCTTCATTCCCCACCACTCACTGAGGTCTCCAAGCTCTGGCTaGCCCAAAACACACGTGCAAATGGGTCAGATGTGCCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: PGFIPHHSLRSPSSG*PKTHVQMGQMCQRC
Trigger: ACATCTCTGGCACATCTGACCCATTTGCACGTGTGTTTTGGGGCAGCCAGAGCTTGGAGACCTCAGTGAGTGGTGGGGAATGAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS CCA 90 bp GCTAGTCTGGGGGTCCGCGTGTTGGTCCCGAAGGTCAAACAGCTTTaGGGTAAGGATGGCAGGTGCGAAGAATCGCAAGAAGAGAAATCC +
Preference number: 5 (lower is better)
Translates to: ASLGVRVLVPKVKQL*GKDGRCEESQEEKS
Trigger: GGATTTCTCTTCTTGCGATTCTTCGCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp TCTGAGACCCAGAGAGAGATAAACAGCCTGGCCCAAGGTCTCCCAGGCTCCAAGGGGAAGCGAGTCTTCTaGATGGTTGAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SETQREINSLAQGLPGSKGKRVF*MVEVSK
Trigger: CTTGGAGACCTCAACCATCAAGAAGACTCGCTTCCC...CTTGGAGCCTGGGAGACCTTGGGCCAGGCTGTTTATCTCTCTCTGGGTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp GTGCCCATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGCCCAAGAAGTCATTCTaGCCCACCATGTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VPIWGNNITWASGIQVQLPKKSF*PTMSQS
Trigger: GGACTGGGACATGGTGGGCAAGAATGACTTCTTGGG...CAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGATGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAAGAGTTTCACCAGCTaGGTGGCAAGGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LGQQHHMGIRNSGPAVSSKSFTS*VARSWR
Trigger: CCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTT...GCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCATGCTCTGCACAGCCTaGGCAAGCAACAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: AGLLGMDRGQFGEVETPVMLCTA*ASNSSE
Trigger: CTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCAT...GACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CACCTGATTCTGGAAGCTTGTGGTTGGAGTCCTAGGCCAAGGGCAGGGTACAGAATGCTCTGCACAGCCTaGGCAAGCAACAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: HLILEACGWSPRPRAGYRMLCTA*ASNSSE
Trigger: CTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCAT...TCTGTACCCTGCCCTTGGCCTAGGACTCCAACCACAAGCTTCCAGAATCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCCATCCACAGTTCCTaGCCTTGGCCCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: IWGNNITWASGIQVQLYPAIHSS*PWPSCW
Trigger: CCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGC...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCTGGCAGGCGGCCAGCTaGTTCGGGTTGGGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAWQAAS*FGLGAL
Trigger: CAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCA...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTGGCAGTTGCTGCTCTTaGCCGGGCCAGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVGSCCS*PGQDLR
Trigger: CCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCC...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp TGCCCATTCCCCAGGCCTGTGGTCCTCAAAGCTGATACTCATCCAAATGACCTAGCCAGGCTGGCCTCCTaGGTATGGATAGAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: CPFPRPVVLKADTHPNDLARLAS*VWIEAS
Trigger: ACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGC...TAGGTCATTTGGATGAGTATCAGCTTTGAGGACCACAGGCCTGGGGAATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CAA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGGGAAGCGAGTCTTCTaGATGGTTGAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPGKRVF*MVEVSK
Trigger: CTTGGAGACCTCAACCATCAAGAAGACTCGCTTCCC...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAGTCTCAGTCTGCCACTCAGGACTCTaGGAGAAGGAGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLGMDRGQFGEVETPVSVCHSGL*EKERVS
Trigger: GGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGCA...GACTGAGACTGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGATGGCAGGCGGCCAGCTaGTTCGGGTTGGGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SQISQVPYPIHSSLNQARWQAAS*FGLGAL
Trigger: CAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCA...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCCAGCAGGCGGGCAGTaGCTGCTCTTTGCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAPAGGQ*LLFAGP
Trigger: TGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAGCAGCTCAGGTCAAGGGAGGGGCCTaGAACATCCCCTTCCATCTC +
Preference number: 5 (lower is better)
Translates to: NNITWASGIQVQLYPAAQVKGGA*NIPFHL
Trigger: GAGATGGAAGGGGATGTTCAAGGCCCCTCCCTTGAC...CTGAGCTGCTGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp ATTTCTAGCAGACATTCTAGCGGGTGGTCTTTGGCCCACAGTCAGAGAAACTCCGTCAAGGGAGGGGCCTaGAACATCCCCTTCCATCTC +
Preference number: 5 (lower is better)
Translates to: ISSRHSSGWSLAHSQRNSVKGGA*NIPFHL
Trigger: GAGATGGAAGGGGATGTTCAAGGCCCCTCCCTTGAC...GGAGTTTCTCTGACTGTGGGCCAAAGACCACCCGCTAGAATGTCTGCTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS-3UTR CAA 90 bp ATCTGGGGCAACAACATCACATGGGCATCAGGAATTCAGGTCCAGCTGTATCCAAAGAGTTTCACCAGCTaGGTGGCAAGGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: IWGNNITWASGIQVQLYPKSFTS*VARSWR
Trigger: CCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTT...TGGATACAGCTGGACCTGAATTCCTGATGCCCATGTGATGTTGTTGCCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCGGCAGTTGCTGCTCTTaGCCGGGCCAGGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQAGSCCS*PGQDLR
Trigger: CCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCC...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTGCCAGGCTGGCCTCCTaGGTATGGATAGAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: SQVPYPIHSSLNQARGQVARLAS*VWIEAS
Trigger: ACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGC...AACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCCCAAACTGTTCCATCGACTaGGATGCCAGGGAGTTAGAA +
Preference number: 5 (lower is better)
Translates to: QAGLLGMDRGQFGEVETPNCSID*DARELE
Trigger: TTCTAACTCCCTGGCATCCAAGTCGATGGAACAGTT...TGGGGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp GGCCAGGCTGGCCTCCTTGGTATGGATAGAGGCCAGTTTGGTGAAGTAGAGACCACTCCTCCCTTGTTCTaGAACTACCTCATTGGAATC +
Preference number: 5 (lower is better)
Translates to: GQAGLLGMDRGQFGEVETTPPLF*NYLIGI
Trigger: GATTCCAATGAGGTAGTTCAAGAACAAGGGAGGAGT...GGTCTCTACTTCACCAAACTGGCCTCTATCCATACCAAGGAGGCCAGCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS GCA 90 bp GTGTTGGTCCCGAAGGTCAAACAGCTTTGGGGTAAGGATGGCAGGTaGGAAGAATCGCAAGAAGAGAAATCCACTGATGGCCAGGTACTT +
Preference number: 5 (lower is better)
Translates to: VLVPKVKQLWGKDGR*EESQEEKSTDGQVL
Trigger: AAGTACCTGGCCATCAGTGGATTTCTCTTCTTGCGATTCTTCGCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS-3UTR CAA 90 bp GGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGAGGGCAAGTTTCACTTCTGCTGGAGGGTCTTaGGAGAGAACTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: GSLSYPLQSESSQRASFTSAGGS*ERTPPC
Trigger: GCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGA...AGTGAAACTTGCCCTCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp AGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCAGACATCACGTGGGGCAGTaGGAAGGCGCCCTCGTCTAC +
Preference number: 5 (lower is better)
Translates to: SQISQVPYPIHSSLNQARHHVGQ*EGALVY
Trigger: GTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATG...TCTGGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCCTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGC +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQALLSEI*PMMSSC
Trigger: GCACGACGACATCATCGGCAAGATCTCGCTGAGCAG...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp CTCAGTCAAATAAGTCAGGTTCCTTATCCTATCCACTCCAGTCTGAATCAAGCCTCTGCTGGAGGGTCTTaGGAGAGAACTCCACCATGC +
Preference number: 5 (lower is better)
Translates to: LSQISQVPYPIHSSLNQASAGGS*ERTPPC
Trigger: GCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGA...GGCTTGATTCAGACTGGAGTGGATAGGATAAGGAACCTGACTTATTTGACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
CDS-3UTR CAA 90 bp ACTCATCCAAATGACCTACGGAATCTGTTAAATAACCCTGATTCTTGCCTTCATGGGAAGCGAGTCTTCTaGATGGTTGAGGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: THPNDLRNLLNNPDSCLHGKRVF*MVEVSK
Trigger: CTTGGAGACCTCAACCATCAAGAAGACTCGCTTCCC...ATGAAGGCAAGAATCAGGGTTATTTAACAGATTCCGTAGGTCATTTGGATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS CAA 90 bp TGCTCGGCCTGGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTGCTaGAAGGCGAGGCGCATGGCGGGCGGGCAGCGCCCCACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: CSAWGKRSSTRRCSC*KARRMAGGQRPTEP
Trigger: GGGCTCCGTGGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCCAGGCCGAGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS TCA 72 bp GGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTGCTTaGAGGCGAGGCGCATGGCGGGCGGGCAGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: GGSAPPLAGAAA*RRGAWRAGSAP
Trigger: TGGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS GCA 72 bp GCCTGGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTaGTTGAAGGCGAGGCGCATGGCGGGCGGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: AWGKRSSTRRCS*LKARRMAGGQR
Trigger: GCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCCAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS CCA 72 bp GCATGGCGGGCGGGCAGCGCCCCACGGAGCCCACGATaGCGTCCACGATGGGCCCCAGGTAGCCCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: AWRAGSAPRSPR*RPRWAPGSPSA
Trigger: TGCTGACGGGCTACCTGGGGCCCATCGTGGACGCCATCGTGGGCTCCGTGGGGCGCTGCCCGCCCGCCATGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS CAA 72 bp TGGGGGAAGCGCTCCTCCACTCGCCGGTGCAGCTGCTaGAAGGCGAGGCGCATGGCGGGCGGGCAGCGCCCC +
Preference number: 6 (lower is better)
Translates to: WGKRSSTRRCSC*KARRMAGGQRP
Trigger: GGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGCTGCACCGGCGAGTGGAGGAGCGCTTCCCCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS CAA 72 bp GCGCTGCGGAAGGCACCGGGGTGGCAGGCGGCCAGCTaGTTCGGGTTGGGGGCGCTGGCCTTGCGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: ALRKAPGWQAAS*FGLGALALRKA
Trigger: GGCCTTGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCACCCCGGTGCCTTCCGCAGCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CAA 90 bp GTCCAGCGCGCGCTGCGGAAGGCACCGGGGTGGCAGGCGGCCAGCTaGTTCGGGTTGGGGGCGCTGGCCTTGCGCAAGGCCGAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: VQRALRKAPGWQAAS*FGLGALALRKAESH
Trigger: GTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCACCCCGGTGCCTTCCGCAGCGCGCGCTGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 72 bp AGGCACCGGGGTGGCAGGCGGCCAGCTTGTTCGGGTTaGGGGCGCTGGCCTTGCGCAAGGCCGAGAGCCACT +
Preference number: 6 (lower is better)
Translates to: RHRGGRRPACSG*GRWPCARPRAT
Trigger: AGTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCACCCCGGTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CAA 72 bp AAGGCACCGGGGTGGCAGGCGGCCAGCTTGTTCGGGTaGGGGGCGCTGGCCTTGCGCAAGGCCGAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: KAPGWQAASLFG*GALALRKAESH
Trigger: GTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGAACAAGCTGGCCGCCTGCCACCCCGGTGCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS GCA 72 bp CCAAGGGGGCCCAGGGCCGCCTTCCCTCGCTCCTGCTaGTGGAACTCCTCGTGGGCACGATCCAGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: PRGPRAAFPRSC*WNSSWARSRSA
Trigger: CGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAAGGCGGCCCTGGGCCCCCTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS GCA 72 bp GGGCCAAGGGGGCCCAGGGCCGCCTTCCCTCGCTCCTaGTGCTGGAACTCCTCGTGGGCACGATCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GPRGPRAAFPRS*CWNSSWARSRS
Trigger: AGACCTGGATCGTGCCCACGAGGAGTTCCAGCAGCAGGAGCGAGGGAAGGCGGCCCTGGGCCCCCTTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CCA 72 bp CCGTCCTGCGTCACCACCTGCATCACGTGGGGCAGTTaGAAGGCGCCCTCGTCTACGCGCTCCACGGCGCGG +
Preference number: 6 (lower is better)
Translates to: PSCVTTCITWGS*KAPSSTRSTAR
Trigger: CCGCGCCGTGGAGCGCGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 72 bp GCCCCCGTGCCGTCCTGCGTCACCACCTGCATCACGTaGGGCAGTTGGAAGGCGCCCTCGTCTACGCGCTCC +
Preference number: 6 (lower is better)
Translates to: APVPSCVTTCIT*GSWKAPSSTRS
Trigger: GGAGCGCGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CAA 72 bp GCCGTCCTGCGTCACCACCTGCATCACGTGGGGCAGTaGGAAGGCGCCCTCGTCTACGCGCTCCACGGCGCG +
Preference number: 6 (lower is better)
Translates to: AVLRHHLHHVGQ*EGALVYALHGA
Trigger: CGCGCCGTGGAGCGCGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CAA 90 bp CGCCCCCGTGCCGTCCTGCGTCACCACCTGCATCACGTGGGGCAGTaGGAAGGCGCCCTCGTCTACGCGCTCCACGGCGCGGATGTGAGA +
Preference number: 6 (lower is better)
Translates to: RPRAVLRHHLHHVGQ*EGALVYALHGADVR
Trigger: TCTCACATCCGCGCCGTGGAGCGCGTAGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS GCA 72 bp GTGTGCAGCGCCCCCGTGCCGTCCTGCGTCACCACCTaGATCACGTGGGGCAGTTGGAAGGCGCCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: VCSAPVPSCVTT*ITWGSWKAPSS
Trigger: AGACGAGGGCGCCTTCCAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS GCA 72 bp CAGGTCTGCGAGCACCTCCAGCAGGCGGGCAGTTGCTaGTCTTTGCCGGGCCAGGACCTCAGGACAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QVCEHLQQAGSC*SLPGQDLRTGP
Trigger: GGGGCCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CAA 90 bp CGTGGGCACGATCCAGGTCTGCGAGCACCTCCAGCAGGCGGGCAGTaGCTGCTCTTTGCCGGGCCAGGACCTCAGGACAGGCCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: RGHDPGLRAPPAGGQ*LLFAGPGPQDRPLC
Trigger: ACACAGGGGCCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS GCA 72 bp GCGAGCACCTCCAGCAGGCGGGCAGTTGCTGCTCTTTaGCGGGCCAGGACCTCAGGACAGGCCCCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: ASTSSRRAVAAL*RARTSGQAPVS
Trigger: AGACACAGGGGCCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS GCA 72 bp CTGCTTCAAGCCTGGCTCCCTGCCTCGTGGTCCCAGTaGCGCCTGTCCGAGACCCGGGTAGCTGGATGGGAG +
Preference number: 6 (lower is better)
Translates to: LLQAWLPASWSQ*RLSETRVAGWE
Trigger: CTCCCATCCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 72 bp CTGCTTCAAGCCTGGCTCCCTGCCTCGTGGTCCCAGTaGCGCCTGTCCGAGACCCGGGTAGCTCCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: LLQAWLPASWSQ*RLSETRVAPLS
Trigger: GGAGAGAGGAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546530.5
CDS TCA 72 bp TGTTGGGGTCCATGGTCCGAGCCACCTCACGCCGGGTaGGATAGTCCAGAAAGCGCCCAGCCAGTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: CWGPWSEPPHAG*DSPESAQPVPG
Trigger: GCCGGGGACTGGCTGGGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGGCTCGGACCATGGACCCCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS TCA 72 bp ATCCAGTGGGTCACTCCAGTCCCCCAGGGTGACAGCTaGGTGTGTACGGCTGCAGCCGGCGGCCCCATCTCC +
Preference number: 6 (lower is better)
Translates to: IQWVTPVPQGDS*VCTAAAGGPIS
Trigger: GGAGATGGGGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS TCA 72 bp CATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGCTGCAGCCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HQDPVGHSSPPG*QLSVYGCSRRP
Trigger: GGGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS GCA 72 bp CTGCTTCAAGCCTGGCTCCCTGCCTCGTGGTCCCAGTaGCGCCTGTCCGAGACCCGGGTAGCATGCAGACAC +
Preference number: 6 (lower is better)
Translates to: LLQAWLPASWSQ*RLSETRVACRH
Trigger: GTGTCTGCATGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261729.9
ENST00000418411.6
CDS GCA 72 bp TCTTGCACTGGAGGTAGGTGGTGTGCAGCGCCCCCGTaGCGTCCTGCGTCACCACCTGCATCACGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: SCTGGRWCAAPP*RPASPPASRGA
Trigger: TGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACACCACCTACCTCCAGTGCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CAA 72 bp GATCCAGGTCTGCGAGCACCTCCAGCAGGCGGGCAGTaGCTGCTCTTTGCCGGGCCAGGACCTCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: DPGLRAPPAGGQ*LLFAGPGPQDR
Trigger: CCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS TCA 72 bp CATCAGGATCCAGTGGGTCACTCCAGTCCCCCAGGGTaGCAGCTGAGTGTGTACGGCTGCAGCCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: HQDPVGHSSPPG*QLSVYGCSRRL
Trigger: CAGCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS TCA 72 bp GTGCCACTGCACTCCAGCCTTGGCAAGCAACAGCAGTaGGCGGCTAGTCTGGGGGTCCGCGTGTTGGTCCCG +
Preference number: 6 (lower is better)
Translates to: VPLHSSLGKQQQ*AASLGVRVLVP
Trigger: CGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAAGGCTGGAGTGCAGTGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546727.5
ENST00000548972.5
CDS GCA 72 bp CTGCTGCTGGAACTCCTCGTGGGCACGATCCAGGTCTaGGAGCACCTCCAGCAGGCGGGCAGTTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LLLELLVGTIQV*EHLQQAGSCCS
Trigger: AGAGCAGCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CCA 72 bp GACCAGGGGACGTCTACATGTCACCTGCTTCAAGCCTaGCTCCCTGCCTCGTGGTCCCAGTGCCGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: DQGTSTCHLLQA*LPASWSQCRLS
Trigger: GGACAGGCGGCACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS TCA 72 bp TGGTCTCCCGCATCTGCTCCTCCGAGAGTGCGCCTTTaGAGGAGATCCTCCGGGTGCGGCCCAGGTCCATCT +
Preference number: 6 (lower is better)
Translates to: WSPASAPPRVRL*RRSSGCGPGPS
Trigger: AGATGGACCTGGGCCGCACCCGGAGGATCTCCTTCAAAGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS GCA 72 bp GCGCGCGGCCCTCCACCACGCGAACATTCAGGGAGCTaGTCTTGGCCATGGCGCCTAGCCACAAACTTTCCA +
Preference number: 6 (lower is better)
Translates to: ARGPPPREHSGS*SWPWRLATNFP
Trigger: TGGAAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTCGCGTGGTGGAGGGCCGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp TGGGAGGCGTCGCCAGAGAGAGGGTCGCATGTTCCCTaGGGGTCCGTTCAGAGTCAAGGGAGGGGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: WEASPERGSHVP*GSVQSQGRGLE
Trigger: TTCAAGGCCCCTCCCTTGACTCTGAACGGACCCCCAGGGAACATGCGACCCTCTCTCTGGCGACGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000546530.5
CDS CCA 72 bp CCTCCTTGCGCTTCAGCAGATAGCCTTCTCGAACAATaGCCGAGGGCGGGAACAGGGCCCTGGCTGGGACAC +
Preference number: 6 (lower is better)
Translates to: PPCASADSLLEQ*PRAGTGPWLGH
Trigger: GTGTCCCAGCCAGGGCCCTGTTCCCGCCCTCGGCCATTGTTCGAGAAGGCTATCTGCTGAAGCGCAAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 72 bp TGGTCCCGCCCCAGGAGCAGCTGCCGATACACTGTCTaGGCCTCAGCATCAGGATCCAGTGGGTCACTCCAG +
Preference number: 6 (lower is better)
Translates to: WSRPRSSCRYTV*ASASGSSGSLQ
Trigger: CTGGAGTGACCCACTGGATCCTGATGCTGAGGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000549444.5
ENST00000551051.5
CDS CCA 72 bp GGGGCCATCCACAGTTCCTTGCCTTGGCCCAGCTGCTaGCCCAGGTTTCCAATGCTCTGCACAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: GAIHSSLPWPSC*PRFPMLCTAWS
Trigger: GCTCCAGGCTGTGCAGAGCATTGGAAACCTGGGCCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS CAA 72 bp CCAGCCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTaGGTGGCAAGGTCCTGGCGGCAGTCCCCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: PASPRPRKSFTS*VARSWRQSPKV
Trigger: GACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CAA 72 bp GGGTCGGCTGTAATCGCCTCCCTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGCCTGCAGGAAGGCGGG +
Preference number: 6 (lower is better)
Translates to: GSAVIASLLSEI*PMMSSCLQEGG
Trigger: CCCGCCTTCCTGCAGGCACGACGACATCATCGGCAAGATCTCGCTGAGCAGGGAGGCGATTACAGCCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551051.5
CDS CAA 90 bp ATCCCTCGGGGGTCGGCTGTAATCGCCTCCCTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGCCTGCAGGAAGGCGGGCACGTGAAG +
Preference number: 6 (lower is better)
Translates to: IPRGSAVIASLLSEI*PMMSSCLQEGGHVK
Trigger: CTTCACGTGCCCGCCTTCCTGCAGGCACGACGACATCATCGGCAAGATCTCGCTGAGCAGGGAGGCGATTACAGCCGACCCCCGAGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551051.5
CDS CAA 90 bp AGAAAGCGCCCAGCCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTaGGTGGCAAGGTCCTGGCGGCAGTCCCCCAAGGTCAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RKRPASPRPRKSFTS*VARSWRQSPKVSSS
Trigger: GGAAGAGCTGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTGGGCGCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 72 bp TTCCGAGGCTGGACCAGGGGACGTCTACATGTCACCTaGTTCAAGCCTGGCTCCCTGCCTCGTGGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: FRGWTRGRLHVT*FKPGSLPRGPS
Trigger: ACTGGGACCACGAGGCAGGGAGCCAGGCTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCCAGCCTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp CCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTTGGTaGCAAGGTCCTGGCGGCAGTCCCCCAAGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: PVPGQERVSPAW*QGPGGSPPRSA
Trigger: AGCTGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp CAGCCAGTCCCCGGCCAAGAAAGAGTTTCACCAGCTTaGTGGCAAGGTCCTGGCGGCAGTCCCCCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: QPVPGQERVSPA*WQGPGGSPPRS
Trigger: TGACCTTGGGGGACTGCCGCCAGGACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp GGGGCCATCCACAGTTCCTTGCCTTGGCCCAGCTGCTaGCCCAGGTTTCCAATGCTCTGCACAGCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GAIHSSLPWPSC*PRFPMLCTALA
Trigger: TGCCAAGGCTGTGCAGAGCATTGGAAACCTGGGCCAGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 72 bp CCAGCCTTGGCAAGCAACAGCAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCCCGAAGGTCAAACAGC +
Preference number: 6 (lower is better)
Translates to: PALASNSSERLV*GSACWSRRSNS
Trigger: GCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546727.5
ENST00000548972.5
CDS CCA 72 bp AGCTGCTGGCCCAGGTTTCCAATGCTCTGCACAGCCTaGAGCAAAGAAGCGAGGGATGCCGGGGCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: SCWPRFPMLCTA*SKEARDAGAKV
Trigger: GACCTTGGCCCCGGCATCCCTCGCTTCTTTGCTCCAGGCTGTGCAGAGCATTGGAAACCTGGGCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS CAA 72 bp CGGCCCTCCACCACGCGAACATTCAGGGAGCTGCTCTaGGCCATGGCGCCTAGCCACAAACTTTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RPSTTRTFRELL*AMAPSHKLSRQ
Trigger: CTGCCTGGAAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTCGCGTGGTGGAGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp GGCCCTCCACCACGCGAACATTCAGGGAGCTGCTCTTaGCCATGGCGCCTAGCCACAAACTTTCCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: GPPPREHSGSCS*PWRLATNFPGR
Trigger: TCTGCCTGGAAAGTTTGTGGCTAGGCGCCATGGCCAAGAGCAGCTCCCTGAATGTTCGCGTGGTGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000547810.1
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp ACAGCCTTGGCAAGCAACAGCAGTGAGCGGCTAGTCTaGGGGTCCGCGTGTTGGTCCCGAAGGTCAAACAGC +
Preference number: 6 (lower is better)
Translates to: TALASNSSERLV*GSACWSRRSNS
Trigger: GCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAAGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000551051.5
CDS CCA 72 bp TCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTGGATaGGAGATTTCCGAAAGAGGAGAAGGTGTAGGTGCC +
Preference number: 6 (lower is better)
Translates to: SQCRLSETRVAG*EISERGEGVGA
Trigger: GGCACCTACACCTTCTCCTCTTTCGGAAATCTCCCATCCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp GTGGTCCCAGTGCCGCCTGTCCGAGACCCGGGTAGCTaGATGGGAGATTTCCGAAAGAGGAGAAGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: VVPVPPVRDPGS*MGDFRKRRRCR
Trigger: CCTACACCTTCTCCTCTTTCGGAAATCTCCCATCCAGCTACCCGGGTCTCGGACAGGCGGCACTGGGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446861.7
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CAA 72 bp GGGTCGGCTGTAATCGCCTCCCTGCTCAGCGAGATCTaGCCGATGATGTCGTCGTGCCCGACAGTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: GSAVIASLLSEI*PMMSSCPTVSS
Trigger: TGAGGACACTGTCGGGCACGACGACATCATCGGCAAGATCTCGCTGAGCAGGGAGGCGATTACAGCCGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
CDS GCA 72 bp CCTGGCATCTCCCGCAGCTCCAGCACTTCATCCCAGTaGGGGAAGCGAGTCTTCTTGATGGTTGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PGISRSSSTSSQ*GKRVFLMVEVS
Trigger: GGAGACCTCAACCATCAAGAAGACTCGCTTCCCGCACTGGGATGAAGTGCTGGAGCTGCGGGAGATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 72 bp AAGGGCAGGAGGCGGAACCAGCCTTTAGGTGGCTTCTaGTGGAGGGTCTTTGGAGAGAACTCCACCATGCCC +
Preference number: 6 (lower is better)
Translates to: KGRRRNQPLGGF*WRVFGENSTMP
Trigger: GGGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCCTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp GGCAGGAGGCGGAACCAGCCTTTAGGTGGCTTCTGCTaGAGGGTCTTTGGAGAGAACTCCACCATGCCCAAG +
Preference number: 6 (lower is better)
Translates to: GRRRNQPLGGFC*RVFGENSTMPK
Trigger: CTTGGGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS GCA 72 bp GCAGCCGGCGGCCCCATCTCCCAGTTCTGTCTCCAATaGCGCTGCTTAACTTCTGCTCTACTCAGGTCACAT +
Preference number: 6 (lower is better)
Translates to: AAGGPISQFCLQ*RCLTSALLRSH
Trigger: ATGTGACCTGAGTAGAGCAGAAGTTAAGCAGCGGCATTGGAGACAGAACTGGGAGATGGGGCCGCCGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS CCA 72 bp AACTTTCCAGGCAGAAGGGCGCTCAGGTTCCGAGGCTaGACCAGGGGACGTCTACATGTCACCTGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: NFPGRRALRFRG*TRGRLHVTCFK
Trigger: CTTGAAGCAGGTGACATGTAGACGTCCCCTGGTCCAGCCTCGGAACCTGAGCGCCCTTCTGCCTGGAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000547810.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp TCTGGGAAAGGGCAGGAGGCGGAACCAGCCTTTAGGTaGCTTCTGCTGGAGGGTCTTTGGAGAGAACTCCAC +
Preference number: 6 (lower is better)
Translates to: SGKGQEAEPAFR*LLLEGLWRELH
Trigger: GTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCCTGCCCTTTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp AACAGCAGTGAGCGGCTAGTCTGGGGGTCCGCGTGTTaGTCCCGAAGGTCAAACAGCTTTGGGGTAAGGATG +
Preference number: 6 (lower is better)
Translates to: NSSERLVWGSAC*SRRSNSFGVRM
Trigger: CATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACACGCGGACCCCCAGACTAGCCGCTCACTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS TCA 72 bp TGGCAGGTGCGAAGAATCGCAAGAAGAGAAATCCACTaGTGGCCAGGTACTTCACATCCGGGTGCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: WQVRRIARREIH*WPGTSHPGAAQ
Trigger: CTGGGCCGCACCCGGATGTGAAGTACCTGGCCATCAGTGGATTTCTCTTCTTGCGATTCTTCGCACCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551051.5
CDS GCA 72 bp TTGGAGAGAACTCCACCATGCCCAAGAAGTCATTCTTaGCCACCATGTCCCAGTCCCAGAGCTCCACCCGCA +
Preference number: 6 (lower is better)
Translates to: LERTPPCPRSHS*PPCPSPRAPPA
Trigger: TGCGGGTGGAGCTCTGGGACTGGGACATGGTGGGCAAGAATGACTTCTTGGGCATGGTGGAGTTCTCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp CTCCAAGCTCTGGCTGCCCCAAAACACACGTGCAAATaGGTCAGATGTGCCAGAGATGTCTCTGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LQALAAPKHTCK*VRCARDVSGSQ
Trigger: CTGGCTCCCAGAGACATCTCTGGCACATCTGACCCATTTGCACGTGTGTTTTGGGGCAGCCAGAGCTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CCA 72 bp GGGGTCCGCGTGTTGGTCCCGAAGGTCAAACAGCTTTaGGGTAAGGATGGCAGGTGCGAAGAATCGCAAGAA +
Preference number: 6 (lower is better)
Translates to: GVRVLVPKVKQL*GKDGRCEESQE
Trigger: TTCTTGCGATTCTTCGCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACACGCGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5
CDS CAA 72 bp AATCCTCCAGTAATTTCAGCCTGCCACTCAGGACTCTaGGAGAAGGAGAGGGTCTCCCCGCTGAGCCAGACG +
Preference number: 6 (lower is better)
Translates to: NPPVISACHSGL*EKERVSPLSQT
Trigger: CGTCTGGCTCAGCGGGGAGACCCTCTCCTTCTCCAAGAGTCCTGAGTGGCAGGCTGAAATTACTGGAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS GCA 72 bp ATTCCCCACCACTCACTGAGGTCTCCAAGCTCTGGCTaGCCCAAAACACACGTGCAAATGGGTCAGATGTGC +
Preference number: 6 (lower is better)
Translates to: IPHHSLRSPSSG*PKTHVQMGQMC
Trigger: GCACATCTGACCCATTTGCACGTGTGTTTTGGGGCAGCCAGAGCTTGGAGACCTCAGTGAGTGGTGGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546727.5
CDS TCA 72 bp TGGCAGGTGCGAAGAATCGCAAGAAGAGAAATCCACTaGTGGCCAGGTACTTCACATCCTGGTGCTCGGCCT +
Preference number: 6 (lower is better)
Translates to: WQVRRIARREIH*WPGTSHPGARP
Trigger: AGGCCGAGCACCAGGATGTGAAGTACCTGGCCATCAGTGGATTTCTCTTCTTGCGATTCTTCGCACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000548055.1
ENST00000548972.5
CDS GCA 72 bp GGCGGCCCCATCTCCCAGTTCTGTCTCCAATGCCGCTaGTTAACTTCTGCTCTACTCAGGTCACATTTAAGC +
Preference number: 6 (lower is better)
Translates to: GGPISQFCLQCR*LTSALLRSHLS
Trigger: GCTTAAATGTGACCTGAGTAGAGCAGAAGTTAAGCAGCGGCATTGGAGACAGAACTGGGAGATGGGGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549444.5
CDS CAA 72 bp GGCATGCCCACGAGCTTCATAAACTGTTCCATCGACTaGGATGCCAGGGAGTTAGAACGGAAGAGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GMPTSFINCSID*DARELERKRVL
Trigger: CAACACCCTCTTCCGTTCTAACTCCCTGGCATCCAAGTCGATGGAACAGTTTATGAAGCTCGTGGGCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261729.9
ENST00000418411.6
ENST00000446861.7
ENST00000546530.5
ENST00000546727.5
ENST00000548055.1
ENST00000548972.5
ENST00000551051.5