Pregenerated sensors for RASA4B (Homo sapiens)
Ensembl gene IDs: ENSG00000170667Ensembl transcript IDs: ENST00000465829.6, ENST00000488284.6
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTCTGGTCTCGAACTCCTaGGCTCAAGCGATTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DKSASFLLCPDRATRGLLLVSNS*AQAILP Trigger: TGGGAGAATCGCTTGAGCTCAGGAGTTCGAGACCAG...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGGCGGTCAGATCACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRGGQIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGACCGCC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGATGGGAAGACACCTGTTaGCAAGCCCACCGTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRWEDTC*QAHRGL Trigger: TAGACCACGGTGGGCTTGGCAACAGGTGTCTTCCCA...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGGCAAGAGAATTGCTTaGACCTGGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRGKRIA*TWEAEV Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCTTGCC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAAGCCTGCCAAGTAGCTaGGATTACAGGCATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRSLPSS*DYRHVP Trigger: TGGCACATGCCTGTAATCCCAGCTACTTGGCAGGCT...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGGTAACGCCAGCATCTaGGAAGACACCTGTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRGNASI*EDTCCQ Trigger: TTGGCAACAGGTGTCTTCCCAGATGCTGGCGTTACC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR CAA 90 bp | TGTCTCATCTCTACCTCTCCCCCTGACCCCTGCCTCTGGGTCATTTaGCAGCAAATCCCAAATGCCTATATCATTTATCCTAAATATTCC | + |
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Preference number: 2 (lower is better) Translates to: CLISTSPPDPCLWVI*QQIPNAYIIYPKYS Trigger: GGAATATTTAGGATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTCAGGGGGAGAGGTAGAGATGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR CCA 72 bp | TCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTaGTCTAGCGGTAACGCCAGCATCTGGGAAGACACC | + |
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Preference number: 3 (lower is better) Translates to: SVMPGQGHQRAP*SSGNASIWEDT Trigger: GGTGTCTTCCCAGATGCTGGCGTTACCGCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| 3UTR GCA 72 bp | TCTAGCGGTAACGCCAGCATCTGGGAAGACACCTGTTaGCAAGCCCACCGTGGTCTAGCTGTAGCGTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: SSGNASIWEDTC*QAHRGLAVALV Trigger: CACTAACGCTACAGCTAGACCACGGTGGGCTTGGCAACAGGTGTCTTCCCAGATGCTGGCGTTACCGCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTAACGGTACATTCTCGTaGTGGGCGCCGGGGAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLNGTFS*WAPGKR Trigger: GCGCTTCCCCGGCGCCCAGCACGAGAATGTACCGTT...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGCCCACGTTCTGGACTaGCTTGGCCAACAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLAHVLD*LGQQEQ Trigger: CTGCTCCTGTTGGCCAAGGCAGTCCAGAACGTGGGC...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTGGCGGTCAGATCACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: WPQGDPSVLASRVAGTRGGGQIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGACCGCC...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGACCGCTCAGCTCCCGGTaGCTCTCCCACAGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRPLSSR*LSHSMA Trigger: GGCCATGCTGTGGGAGAGGCACCGGGAGCTGAGCGG...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAAGCTGCCCTGGGCCCTaGATGCCCAGCTTGACCTCG | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRSCPGP*MPSLTS Trigger: CGAGGTCAAGCTGGGCATGCAGGGCCCAGGGCAGCT...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAAGTCCTCGGGGACTTTaGCAGGGCTCGTGGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRSPRGL*QGSWAP Trigger: CGGTGCCCACGAGCCCTGGCAAAGTCCCCGAGGACT...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGGTCGCTGCTGCCAGTaGTGTCCTTGGCGGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRGRCCQ*CPWREG Trigger: ACCTTCCCGCCAAGGACATCACTGGCAGCAGCGACC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGAGCTGAGGGGACAATaGGGAGTGACCAGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLELRGQ*GVTRRQ Trigger: TTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTC...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTTCTCCCACCTCAGCCTaGCAAGTAGCTGGGATTACA | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLSPTSA*QVAGIT Trigger: TGTAATCCCAGCTACTTGGCAGGCTGAGGTGGGAGA...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGTCTTATCGCAGCCCTaGCCTGTCTTCTCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLVLSQP*PVFSFW Trigger: CCAAAAAGAGAAGACAGGTCAGGGCTGCGATAAGAC...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGACTCCTGGCCTCAAGGTaGTCCTTCTGTCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRLLASR*SFCLGL Trigger: GAGGCCAAGACAGAAGGATCACCTTGAGGCCAGGAG...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTCATCAATCACCACTTTaGCCAGGAAGTCGTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: WPQGDPSVLASRVAGTRGHQSPL*PGSRFG Trigger: GCCGAAACGACTTCCTGGGCAAAGTGGTGATTGATG...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTCAAGATCAAGCCATTTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: WPQGDPSVLASRVAGTRGQDQAI*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAAATGGCTTGATCTTG...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGGGGACAATGAGGAGTaGCCAGAAGACAAGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRGDNEE*PEDKSA Trigger: CGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAAGGCATGTGCCACTGTaGCCAGCCAAGTGCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRRHVPL*PAKCSI Trigger: GATACTGCACTTGGCTGGGCACAGTGGCACATGCCT...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTTACAAAGATAGACTATaGAGGATAATGAGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: DKSASFLLCPDRATRGLLYKDRL*RIMSPH Trigger: GTGGGGGCTCATTATCCTGCATAGTCTATCTTTGTA...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGCCTCTGGGTCATTTTaGAGCAAATCCCAAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRASGSF*SKSQMP Trigger: AGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR GCA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAACCAGAAGACAAGAGTaGGAGCTTTCTGTTATGCCC | + |
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Preference number: 4 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRTRRQE*ELSVMP Trigger: GGGCATAACAGAAAGCTCGCACTCTTGTCTTCTGGT...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS CCA 90 bp | GGTAGGAGCCCAGGAGGCTGGTGTGGGCTGGATTTCAGCCGCCGCTaGCCCCTTGGCCACGCTCGTAGGTATTCCAGAACCCGCCAAATA | + |
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Preference number: 5 (lower is better) Translates to: GRSPGGWCGLDFSRR*PLGHARRYSRTRQI Trigger: TATTTGGCGGGTTCTGGAATACCTACGAGCGTGGCCAAGGGGCCAGCGGCGGCTGAAATCCAGCCCACACCAGCCTCCTGGGCTCCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488284.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTTGCAAGGAGCCCAGGTaGCCCTCGTCATGCCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGCKEPR*PSSCRR Trigger: CCGGCGGCATGACGAGGGCAACCTGGGCTCCTTGCA...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS GCA 90 bp | GAGTGCCGGTCATCCCAGCTACTGGGGAGGTTGAGGCAGGAGAATTaGTTGACCCTGGGAGGTGGAGATTGCAGCGAGCTGAGATCGTGC | + |
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Preference number: 5 (lower is better) Translates to: ECRSSQLLGRLRQEN*LTLGGGDCSELRSC Trigger: GCACGATCTCAGCTCGCTGCAATCTCCACCTCCCAGGGTCAAGCAATTCTCCTGCCTCAACCTCCCCAGTAGCTGGGATGACCGGCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488284.6 |
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| CDS-3UTR CAA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTCTCCGGAACAGGGTGTaGGTCTCACTGGTGCGACTC | + |
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Preference number: 5 (lower is better) Translates to: DKSASFLLCPDRATRGLLLRNRV*VSLVRL Trigger: GAGTCGCACCAGTGAGACCAACACCCTGTTCCGGAG...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTACGTTCTGGACTGCCTaGGCCAACAGGAGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGTFWTA*ANRSRV Trigger: CACCCTGCTCCTGTTGGCCAAGGCAGTCCAGAACGT...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTATGAGGGCGCTTTTCTaGGAGCTGGGCGTCTTCGCG | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGMRALF*ELGVFA Trigger: CGCGAAGACGCCCAGCTCCAAGAAAAGCGCCCTCAT...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | ACAGAGATAGGAGCTGAGGGGACAATGAGGAGTGACCAGAAGACAAGAGTGCGAGAGTCCTCGGGGACTTaGCCAGGGCTCGTGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: TEIGAEGTMRSDQKTRVRESSGT*PGLVGT Trigger: GGTGCCCACGAGCCCTGGCAAAGTCCCCGAGGACTC...TCGCACTCTTGTCTTCTGGTCACTCCTCATTGTCCCCTCAGCTCCTATCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | GACAAGAGTGCGAGCTTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTCCAAGATCAAGCCATTaGCACTCCAGCCTGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: DKSASFLLCPDRATRGLLPRSSH*HSSLGN Trigger: GTTGCCCAGGCTGGAGTGCAAATGGCTTGATCTTGG...AAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAAGCTCGCACTCTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTAGGCAAGAGAATTGCTaGAACCTGGGAGGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGRQENC*NLGGRG Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTCTTGCCT...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTACATCAATCACCACTTaGCCCAGGAAGTCGTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGTSITT*PRKSFR Trigger: CCGAAACGACTTCCTGGGCAAAGTGGTGATTGATGT...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS-3UTR CAA 90 bp | TGGCCTCAAGGTGATCCTTCTGTCTTGGCCTCCCGAGTAGCTGGGACTAGAGGTTGCCTCTGGGTCATTTaGCAGCAAATCCCAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: WPQGDPSVLASRVAGTRGCLWVI*QQIPNA Trigger: GGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCA...ACCTCTAGTCCCAGCTACTCGGGAGGCCAAGACAGAAGGATCACCTTGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465829.6 |
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| CDS CCA 72 bp | CCAGGAGGCTGGTGTGGGCTGGATTTCAGCCGCCGCTaGCCCCTTGGCCACGCTCGTAGGTATTCCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: PGGWCGLDFSRR*PLGHARRYSRT Trigger: GGTTCTGGAATACCTACGAGCGTGGCCAAGGGGCCAGCGGCGGCTGAAATCCAGCCCACACCAGCCTCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488284.6 |
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