Pregenerated sensors for RASA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000105808Ensembl transcript IDs: ENST00000262940.12, ENST00000521822.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTTCTCCCACCTCAGCCTaGCAAGTAGCTGGGATTACA | + |
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Preference number: 2 (lower is better) Translates to: EPPHTPHLLSVIISSWLPSPTSA*QVAGIT Trigger: TGTAATCCCAGCTACTTGGCAGGCTGAGGTGGGAGA...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTCAAGATCAAGCCATTTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: EPPHTPHLLSVIISSWLPQDQAI*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAAATGGCTTGATCTTG...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTGCCTCTGGGTCATTTTaGAGCAAATCCCAAATGCCT | + |
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Preference number: 2 (lower is better) Translates to: EPPHTPHLLSVIISSWLPASGSF*SKSQMP Trigger: AGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGC...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR GCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATAGGCATGTGCCACTGTaGCCAGCCAAGTGCAGTATC | + |
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Preference number: 2 (lower is better) Translates to: DPCLWVILQQIPNAYIIYRHVPL*PAKCSI Trigger: GATACTGCACTTGGCTGGGCACAGTGGCACATGCCT...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTCCAAGATCAAGCCATTaGCACTCCAGCCTGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: EPPHTPHLLSVIISSWLPPRSSH*HSSLGN Trigger: GTTGCCCAGGCTGGAGTGCAAATGGCTTGATCTTGG...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTAGGCAAGAGAATTGCTaGAACCTGGGAGGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: EPPHTPHLLSVIISSWLPRQENC*NLGGRG Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTCTTGCCT...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTTGCCTCTGGGTCATTTaGCAGCAAATCCCAAATGCC | + |
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Preference number: 3 (lower is better) Translates to: EPPHTPHLLSVIISSWLPCLWVI*QQIPNA Trigger: GGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCA...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATTTGGGGCCAGATCCCTaGCCTCCAGCACAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DPCLWVILQQIPNAYIIYLGPDP*PPAQSS Trigger: GCTGCTCTGTGCTGGAGGCCAGGGATCTGGCCCCAA...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GAGCCCCCACATACTCCGCATCTCTTGTCTGTAATTATCAGCTCGTGGCTACCTAGCCTGCCAAGTAGCTaGGATTACAGGCATGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EPPHTPHLLSVIISSWLPSLPSS*DYRHVP Trigger: TGGCACATGCCTGTAATCCCAGCTACTTGGCAGGCT...AGGTAGCCACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATCGTTCTGGACTGCCTTaGCCAACAGGAGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DPCLWVILQQIPNAYIIYRSGLP*PTGAGC Trigger: GCACCCTGCTCCTGTTGGCCAAGGCAGTCCAGAACG...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATTCCGGAACAGGGTGTTaGTCTCACTGGTGCGACTCA | + |
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Preference number: 4 (lower is better) Translates to: DPCLWVILQQIPNAYIIYSGTGC*SHWCDS Trigger: TGAGTCGCACCAGTGAGACCAACACCCTGTTCCGGA...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATATGTTGCCCACGTTCTaGACTGCCTTGGCCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: DPCLWVILQQIPNAYIIYMLPTF*TALANR Trigger: CCTGTTGGCCAAGGCAGTCCAGAACGTGGGCAACAT...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS-3UTR CCA 90 bp | GACCCCTGCCTCTGGGTCATTTTGCAGCAAATCCCAAATGCCTATATCATTTATCCTGACCCCTGCCTCTaGGTCATTTTGCAGCAAATC | + |
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Preference number: 4 (lower is better) Translates to: DPCLWVILQQIPNAYIIYPDPCL*VILQQI Trigger: GATTTGCTGCAAAATGACCCAGAGGCAGGGGTCAGG...ATAAATGATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262940.12 |
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| CDS CAA 90 bp | GCCCAGGAGGCTGGTGTGGGCTGGATTTCAGCCGCCGCTGGCCCCTaGGCCACGCTCGTAGGTATTCCAGAACCCGCCAAATATATTTGG | + |
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Preference number: 6 (lower is better) Translates to: AQEAGVGWISAAAGP*ATLVGIPEPAKYIW Trigger: CCAAATATATTTGGCGGGTTCTGGAATACCTACGAGCGTGGCCAAGGGGCCAGCGGCGGCTGAAATCCAGCCCACACCAGCCTCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521822.1 |
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| CDS CAA 72 bp | CACGCTCGTAGGTATTCCAGAACCCGCCAAATATATTaGGTGGCCCTGATATCACTACTTTTCCCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HARRYSRTRQIY*VALISLLFPVA Trigger: AGCCACTGGGAAAAGTAGTGATATCAGGGCCACCAAATATATTTGGCGGGTTCTGGAATACCTACGAGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521822.1 |
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