Pregenerated sensors for RASA3-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000232487Ensembl transcript IDs: ENST00000454005.1, ENST00000625345.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTCAGCAGGACCCTTGTGTGCACAGCTTCTGAGTCACTGGGCGGCTaGGCACAGCCTAACTCAGGAGCAGGGACCCACGGAGGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSRTLVCTASESLGG*AQPNSGAGTHGGCG Trigger: GCCACACCCTCCGTGGGTCCCTGCTCCTGAGTTAGGCTGTGCCCAGCCGCCCAGTGACTCAGAAGCTGTGCACACAAGGGTCCTGCTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CCA 90 bp | CGCTGTCCTTCAGCAGGACCCTTGTGTGCACAGCTTCTGAGTCACTaGGCGGCTGGGCACAGCCTAACTCAGGAGCAGGGACCCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCPSAGPLCAQLLSH*AAGHSLTQEQGPTE Trigger: CTCCGTGGGTCCCTGCTCCTGAGTTAGGCTGTGCCCAGCCGCCCAGTGACTCAGAAGCTGTGCACACAAGGGTCCTGCTGAAGGACAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS GCA 90 bp | GAGCAGGGACCCACGGAGGGTGTGGCGACGACACAGCCCTCAGCTTaGTCTCCAGGAGTTCTTCTGATACCTCGAGGACACTCTGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: EQGPTEGVATTQPSA*SPGVLLIPRGHSGP Trigger: GGGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCGTCGCCACACCCTCCGTGGGTCCCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS TCA 90 bp | GTGTGGCGACGACACAGCCCTCAGCTTGCTCTCCAGGAGTTCTTCTaGTACCTCGAGGACACTCTGGACCCTGTGTCTGGGTCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VWRRHSPQLALQEFF*YLEDTLDPVSGSQP Trigger: GGGCTGGGACCCAGACACAGGGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCGTCGCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CCA 90 bp | CTCAGCTTGCTCTCCAGGAGTTCTTCTGATACCTCGAGGACACTCTaGACCCTGTGTCTGGGTCCCAGCCCTTCCGTAACAACGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSRSSSDTSRTL*TLCLGPSPSVTTWL Trigger: GAGCCACGTTGTTACGGAAGGGCTGGGACCCAGACACAGGGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CAA 90 bp | GGAGCAGGGACCCACGGAGGGTGTGGCGACGACACAGCCCTCAGCTaGCTCTCCAGGAGTTCTTCTGATACCTCGAGGACACTCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GAGTHGGCGDDTALS*LSRSSSDTSRTLWT Trigger: GGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCGTCGCCACACCCTCCGTGGGTCCCTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CCA 72 bp | ACCCTTGTGTGCACAGCTTCTGAGTCACTGGGCGGCTaGGCACAGCCTAACTCAGGAGCAGGGACCCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: TLVCTASESLGG*AQPNSGAGTHG Trigger: TCCGTGGGTCCCTGCTCCTGAGTTAGGCTGTGCCCAGCCGCCCAGTGACTCAGAAGCTGTGCACACAAGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS GCA 72 bp | CCCACGGAGGGTGTGGCGACGACACAGCCCTCAGCTTaGTCTCCAGGAGTTCTTCTGATACCTCGAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PTEGVATTQPSA*SPGVLLIPRGH Trigger: GTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCGTCGCCACACCCTCCGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CCA 72 bp | TCAGCAGGACCCTTGTGTGCACAGCTTCTGAGTCACTaGGCGGCTGGGCACAGCCTAACTCAGGAGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGPLCAQLLSH*AAGHSLTQEQG Trigger: TCCCTGCTCCTGAGTTAGGCTGTGCCCAGCCGCCCAGTGACTCAGAAGCTGTGCACACAAGGGTCCTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CAA 72 bp | ACCCACGGAGGGTGTGGCGACGACACAGCCCTCAGCTaGCTCTCCAGGAGTTCTTCTGATACCTCGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: THGGCGDDTALS*LSRSSSDTSRT Trigger: TGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCGTCGCCACACCCTCCGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS TCA 72 bp | CGACACAGCCCTCAGCTTGCTCTCCAGGAGTTCTTCTaGTACCTCGAGGACACTCTGGACCCTGTGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHSPQLALQEFF*YLEDTLDPVSG Trigger: CCCAGACACAGGGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAGCAAGCTGAGGGCTGTGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||
| CDS CCA 72 bp | CTCTCCAGGAGTTCTTCTGATACCTCGAGGACACTCTaGACCCTGTGTCTGGGTCCCAGCCCTTCCGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: LSRSSSDTSRTL*TLCLGPSPSVT Trigger: TGTTACGGAAGGGCTGGGACCCAGACACAGGGTCCAGAGTGTCCTCGAGGTATCAGAAGAACTCCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454005.1 ENST00000625345.1 |
||