RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185989

Ensembl transcript IDs: ENST00000334062.8, ENST00000542651.2, ENST00000628197.1, ENST00000630618.2

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGTGGGCTTTCTGCGGAGGGCGTGGCGGTGGTGGCAGCGGTTCTaGGAGAGGGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGG +
Preference number: 1 (lower is better)
Translates to: QVGFLRRAWRWWQRF*ERETPAPLVYGPGR
Trigger: CCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp CACGTTCCACAGGGCCAGGTGGGCTTTCTGCGGAGGGCGTGGCGGTaGTGGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCACTTGTC +
Preference number: 1 (lower is better)
Translates to: HVPQGQVGFLRRAWR*WQRFWERETPAPLV
Trigger: GACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GCGCTTCCCACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTaGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCT +
Preference number: 1 (lower is better)
Translates to: ALPTHLPSASREDAL*ERPPRQCEVWRGLP
Trigger: AGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp CTTTGCCGGCTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTaGGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGCGTCCC +
Preference number: 1 (lower is better)
Translates to: LCRLCALPSLLPPKG*GFAWAACWRHWARP
Trigger: GGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GTTCCACAGGGCCAGGTGGGCTTTCTGCGGAGGGCGTGGCGGTGGTaGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCACTTGTCTAT +
Preference number: 1 (lower is better)
Translates to: VPQGQVGFLRRAWRW*QRFWERETPAPLVY
Trigger: ATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp GCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTaGACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTC +
Preference number: 1 (lower is better)
Translates to: ATEPSVTRTVHARQT*TRLTHTRPEVHVTV
Trigger: GACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GTGGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCACTTGTCTATaGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTCTGCGCTCTT +
Preference number: 1 (lower is better)
Translates to: VAAVLGEGNPSATCL*AGTACISLCRLCAL
Trigger: AAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 90 bp CCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGCACGAGACTaGCGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGACGG +
Preference number: 1 (lower is better)
Translates to: PASHAPCTQDRRARD*RTHGRRCMSQSTRR
Trigger: CCGTCTAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp CCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTaGCGGCTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGC +
Preference number: 1 (lower is better)
Translates to: PSATCLWAGTACISL*RLCALPSLLPPKGC
Trigger: GCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp GGAGAGGGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTaGATCTCACTTTGCCGGCTCTGCGCTCTTCCTTCTCTTCTCCCT +
Preference number: 1 (lower is better)
Translates to: GEGNPSATCLWAGTA*ISLCRLCALPSLLP
Trigger: AGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp CGTCGTGCTGTGTATTTAAACGGCGCTTCCCACACACCTGCCGTCTaGATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGGCAGTG +
Preference number: 1 (lower is better)
Translates to: RRAVYLNGASHTPAV*IPGGRPLGKASSAV
Trigger: CACTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCGCCGTTTAAATACACAGCACGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp ACAGAATCAAATGACGACACGTTCCACAGGGCCAGGTGGGCTTTCTaGGGAGGGCGTGGCGGTGGTGGCAGCGGTTCTGGGAGAGGGAAA +
Preference number: 1 (lower is better)
Translates to: TESNDDTFHRARWAF*GGRGGGGSGSGRGK
Trigger: TTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAACGTGTCGTCATTTGATTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GCAAAAAGCACAGAATCAAATGACGACACGTTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGTGGCGGTGGTGGCAGCGGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: AKSTESNDDTFHRAR*AFCGGRGGGGSGSG
Trigger: CCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAACGTGTCGTCATTTGATTCTGTGCTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp ACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTGGAGAAGCTaGAGCCCACACCTTTCCCTCCAAGGGACTCTGTGGACAGAACCC +
Preference number: 1 (lower is better)
Translates to: TMWASTVGSADAWRS*SPHLSLQGTLWTEP
Trigger: GGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp ACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTCTaGGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCA +
Preference number: 1 (lower is better)
Translates to: TCLWAGTACISLCRL*ALPSLLPPKGCGFA
Trigger: TGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp AAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACACACCTaGCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: KDTSCCVFKRRFPHT*RLHPGRTPFGKGLL
Trigger: GAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp AACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTaGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGGGACTCTGTGG +
Preference number: 1 (lower is better)
Translates to: NSKTMWASTVGSADA*RSWSPHLSLQGTLW
Trigger: CCACAGAGTCCCTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GGAATCAAACGAACCTCGAAAGTGGAACAGGGAGGCCGCCTCCCATaGCTGCCTGGATGGCAGGCACAGTGGGAGAGTAATGCTCTGAAC +
Preference number: 1 (lower is better)
Translates to: GIKRTSKVEQGGRLP*LPGWQAQWESNALN
Trigger: GTTCAGAGCATTACTCTCCCACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCGAGGTTCGTTTGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 90 bp GTGGACAGAACCCGTATCCCCCAAGCACCAAGGACATCCTCAGACTaGGACTTCTGTGTAATTCTGCACCTCCCAGCCATAAAACTGACC +
Preference number: 1 (lower is better)
Translates to: VDRTRIPQAPRTSSD*DFCVILHLPAIKLT
Trigger: GGTCAGTTTTATGGCTGGGAGGTGCAGAATTACACAGAAGTCCCAGTCTGAGGATGTCCTTGGTGCTTGGGGGATACGGGTTCTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 90 bp TATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTaGTGTGTATTTAAACGGCGCTTCCCACACACCTGCCGTCTGCAT +
Preference number: 1 (lower is better)
Translates to: YFQTRTGRSRYKDTS*CVFKRRFPHTCRLH
Trigger: ATGCAGACGGCAGGTGTGTGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 90 bp TCCATTTGCCTTCCCGGCAGCCTTCCCTTTAGTGGGTATAGGTTTTaGCGTTCTGAGTTACTTTGTATCAAAGAGCTAATTAAAAATGGT +
Preference number: 1 (lower is better)
Translates to: SICLPGSLPFSGYRF*RSELLCIKELIKNG
Trigger: ACCATTTTTAATTAGCTCTTTGATACAAAGTAACTCAGAACGTCAAAACCTATACCCACTAAAGGGAAGGCTGCCGGGAAGGCAAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 90 bp GGCGGTGGTGGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCACTaGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GGGGSGSGRGKPQRH*SMGRDGVHLTLPAL
Trigger: CAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCGCGTGCATCTCACTTTaGCGGCTCTGCGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCACISL*RLCALP
Trigger: AGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGC...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTGCCAGGTGGGCTTTCTaGGGAGGGCGTGGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: RKWNREAASHGCLDGRHSARWAF*GGRGGG
Trigger: ACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGC...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGGGCTGCGGCTTTGCATaGGCAGCTTGCTGGCGCCAC +
Preference number: 2 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSGCGFA*AACWRH
Trigger: GTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCC...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGAGGGCGTGGCGGTGGTaGCAGCGGTTCTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKRAWRW*QRFWER
Trigger: CCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGCGACTAGACGGGCCGTaGCTCCCTGAGGCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: GHRATEPSVTRTVHARQTRLDGP*LPEAGC
Trigger: ACAGCCAGCCTCAGGGAGCCACGGCCCGTCTAGTCG...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCGACTAGACGGGCCGTaGCTCCCTGAGGCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSRLDGP*LPEAGC
Trigger: ACAGCCAGCCTCAGGGAGCCACGGCCCGTCTAGTCG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 90 bp GGCTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTaGCATGGGCAGCTTGCTGGCGCCACTGGGCGCGTCCCGCAGACT +
Preference number: 2 (lower is better)
Translates to: GSALFLLFSLPKAAA*HGQLAGATGRVPQT
Trigger: AGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGAGCGCCACTTGTCTATaGGCCGGGACGGCGTGCATC +
Preference number: 2 (lower is better)
Translates to: GHRATEPSVTRTVHARQTSATCL*AGTACI
Trigger: GATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTTTGCATGGGCAGCTTaGTGGCGCCACTGGGCGCGT +
Preference number: 2 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKFAWAA*WRHWAR
Trigger: ACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGGCATGGGCAGCTTGCTaGCGCCACTGGGCGCGTCCC +
Preference number: 2 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRAWAAC*RHWARP
Trigger: GGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGC...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTGGTGGCAGCGGTTCTaGGAGAGGGAAACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTWWQRF*ERETPA
Trigger: CGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCA...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 90 bp CCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: PQRHLSMGRDGVHLT*PALRSSFSSPSQRL
Trigger: CAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGCGGGCCGTGGCTCCCTaGGGCTGGCTGTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSRAVAP*GWLWCG
Trigger: GCCACACCACAGCCAGCCTCAGGGAGCCACGGCCCG...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCGCATGGGCAGCTTGCTaGCGCCACTGGGCGCGTCCC +
Preference number: 2 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFAWAAC*RHWARP
Trigger: GGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGC...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGATGCAGCTGGCCTTCCTaGGACAGGCTCCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGCSWPS*DRLHSC
Trigger: ACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCA...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGCCAGGTGGGCTTTCTaGGGAGGGCGTGGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLARWAF*GGRGGG
Trigger: ACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCACGCAAGACAGACGTaGACGAGACTGACGCACACA +
Preference number: 2 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSHARQT*TRLTHT
Trigger: TGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCAACGAACCTCGAAAGTaGAACAGGGAGGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTNEPRK*NREAAS
Trigger: GGAGGCGGCCTCCCTGTTCCACTTTCGAGGTTCGTT...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTAGACGTGCACGAGACTaGCGCACACACGGCCGGAGG +
Preference number: 2 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPRRARD*RTHGRR
Trigger: CCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTGCCGCCTCCCATGGCTaGCTGGATGGCAGGCACAGT +
Preference number: 2 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLAASHG*LDGRHS
Trigger: ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGC...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTGGCTGCGGCTTTGCATaGGCAGCTTGCTGGCGCCAC +
Preference number: 2 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLGCGFA*AACWRH
Trigger: GTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCC...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGTTTCTGCGGAGGGCGTaGCGGTGGTGGCAGCGGTTC +
Preference number: 2 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKFLRRA*RWWQRF
Trigger: GAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAA...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGAAGCACAGAATCAAATaGCGACACGTTCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVKHRIK*RHVPQG
Trigger: GCCCTGTGGAACGTGTCGTCATTTGATTCTGTGCTT...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTTTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGT +
Preference number: 2 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLFHRAR*AFCGGR
Trigger: ACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAA...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGTTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGT +
Preference number: 2 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKFHRAR*AFCGGR
Trigger: ACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAA...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGTGTGGGCTTCAACTGTaGGCTCCGCAGACGCCTGGA +
Preference number: 2 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLCGLQL*APQTPG
Trigger: TCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACA...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTGGGAGAGTAATGCTCTaGACCTCCCAATGTGATGAA +
Preference number: 2 (lower is better)
Translates to: RKWNREAASHGCLDGRHSGRVML*TSQCDE
Trigger: TTCATCACATTGGGAGGTTCAGAGCATTACTCTCCC...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGCTCCCTCCCAAAGGCTaGGGCTTTGCATGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSLPPKG*GFAWAA
Trigger: AGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTAACGAACCTCGAAAGTaGAACAGGGAGGCCGCCTCC +
Preference number: 2 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPNEPRK*NREAAS
Trigger: GGAGGCGGCCTCCCTGTTCCACTTTCGAGGTTCGTT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTTCACTTTGCCGGCTCTaGGCTCTTCCTTCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: KTDVHETDAHTAGGACHSSLCRL*ALPSLL
Trigger: GAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGA...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGACACACGGCCGGAGGTaGATGTCACAGTCGACTAGA +
Preference number: 2 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLTHGRR*MSQSTR
Trigger: TCTAGTCGACTGTGACATGCACCTCCGGCCGTGTGT...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGGCGTCACACGCACCGTaGACGCAAGACAGACGTGCA +
Preference number: 2 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLASHAP*TQDRRA
Trigger: TGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGC...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGGCTCCGCAGACGCCTaGAGAAGCTGGAGCCCACAC +
Preference number: 2 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGGSADA*RSWSPH
Trigger: GTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCC...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACAAAGGCTGCGGCTTTaGATGGGCAGCTTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPQRLRL*MGSLLA
Trigger: CGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGACACACGGCCGGAGGTaGATGTCACAGTCGACTAGA +
Preference number: 2 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSTHGRR*MSQSTR
Trigger: TCTAGTCGACTGTGACATGCACCTCCGGCCGTGTGT...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTAAGCACAGAATCAAATaGCGACACGTTCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPKHRIK*RHVPQG
Trigger: GCCCTGTGGAACGTGTCGTCATTTGATTCTGTGCTT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR TCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCAGTGGGTATAGGTTTTaGCGTTCTGAGTTACTTTGT +
Preference number: 2 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTSGYRF*RSELLC
Trigger: ACAAAGTAACTCAGAACGTCAAAACCTATACCCACT...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCAAAGGCTGCGGCTTTaGATGGGCAGCTTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGQRLRL*MGSLLA
Trigger: CGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGGGAGGCCGCCTCCCATaGCTGCCTGGATGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTGGRLP*LPGWQA
Trigger: TGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCC...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGAACAGCAAAACGATGTaGGCTTCAACTGTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLNSKTM*ASTVGS
Trigger: GGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTT...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTGGGCCGGGACGGCGTaGATCTCACTTTGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTWAGTA*ISLCRL
Trigger: GAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCA...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACACGCAAGACAGACGTaGACGAGACTGACGCACACA +
Preference number: 2 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPHARQT*TRLTHT
Trigger: TGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTTTCTGCGGAGGGCGTaGCGGTGGTGGCAGCGGTTC +
Preference number: 2 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTFLRRA*RWWQRF
Trigger: GAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAA...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGACTGACCATGGGCCCTaGAGGGACGTCTGCACCCCG +
Preference number: 2 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTTDHGP*RDVCTP
Trigger: CGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGT...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGCGGGAGGACGCCCTTTaGGAAAGGCCTCCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSREDAL*ERPPRQ
Trigger: CTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCG...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGGTGGCAGCGGTTCTaGGAGAGGGAAACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSWWQRF*ERETPA
Trigger: CGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCA...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR GCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGGCGTGCATCTCACTTTaGCGGCTCTGCGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTACISL*RLCALP
Trigger: AGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGC...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCAACAGCAAAACGATGTaGGCTTCAACTGTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGNSKTM*ASTVGS
Trigger: GGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTT...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGGATGGCAGGCACAGTaGGAGAGTAATGCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSGWQAQ*ESNALN
Trigger: GTTCAGAGCATTACTCTCCCACTGTGCCTGCCATCC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp GGCCAGGTGGGCTTTCTGCGGAGGGCGTGGCGGTGGTaGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCA +
Preference number: 3 (lower is better)
Translates to: GQVGFLRRAWRW*QRFWERETPAP
Trigger: TGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp CAGGGCCAGGTGGGCTTTCTGCGGAGGGCGTGGCGGTaGTGGCAGCGGTTCTGGGAGAGGGAAACCCCAGCG +
Preference number: 3 (lower is better)
Translates to: QGQVGFLRRAWR*WQRFWERETPA
Trigger: CGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CAA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTCTTTGCATGGGCAGCTaGCTGGCGCCACTGGGCGCG +
Preference number: 3 (lower is better)
Translates to: RKWNREAASHGCLDGRHSLCMGS*LAPLGA
Trigger: CGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAG...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp CCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATaGGCAGCTTGCTGGCGCCACTGGGCGCGTCCCGCA +
Preference number: 3 (lower is better)
Translates to: PSLLPPKGCGFA*AACWRHWARPA
Trigger: TGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CAA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCCCAAAGGCTGCGGCTTaGCATGGGCAGCTTGCTGGC +
Preference number: 3 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGPKAAA*HGQLAG
Trigger: GCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGG...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp CCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTaGACGAGACTGACGCACACACGGCCGGAGGTGCAT +
Preference number: 3 (lower is better)
Translates to: PSVTRTVHARQT*TRLTHTRPEVH
Trigger: ATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp ACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTaGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: THLPSASREDAL*ERPPRQCEVWR
Trigger: CCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CAA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTGVHLT*PALRSS
Trigger: GGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 72 bp CACGCACCGTGCACGCAAGACAGACGTGCACGAGACTaGCGCACACACGGCCGGAGGTGCATGTCACAGTCG +
Preference number: 3 (lower is better)
Translates to: HAPCTQDRRARD*RTHGRRCMSQS
Trigger: CGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTGCACGGTGCGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp GTTCTGGGAGAGGGAAACCCCAGCGCCACTTGTCTATaGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTC +
Preference number: 3 (lower is better)
Translates to: VLGEGNPSATCL*AGTACISLCRL
Trigger: GAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CAA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: DVHETDAHTAGGACHSRLGVHLT*PALRSS
Trigger: GGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCC...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp AACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTaGATCTCACTTTGCCGGCTCTGCGCTCTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: NPSATCLWAGTA*ISLCRLCALPS
Trigger: AGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp ACAGAATCAAATGACGACACGTTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGTGGCGGTGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: TESNDDTFHRAR*AFCGGRGGGGS
Trigger: GCTGCCACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAACGTGTCGTCATTTGATTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp ACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTaGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGGG +
Preference number: 3 (lower is better)
Translates to: TMWASTVGSADA*RSWSPHLSLQG
Trigger: CCCTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp ACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTaGCGGCTCTGCGCTCTTCCTTCTCTTCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TCLWAGTACISL*RLCALPSLLPP
Trigger: GGGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp GTGTATTTAAACGGCGCTTCCCACACACCTGCCGTCTaGATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: VYLNGASHTPAV*IPGGRPLGKAS
Trigger: GGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCGCCGTTTAAATACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR-3UTR CAA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCAAACCCCAGCGCCACTaGTCTATGGGCCGGGACGGC +
Preference number: 3 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTKPQRH*SMGRDG
Trigger: GCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTT...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 72 bp CACAGCATCTGGGGGTTCATAACACAGGTGCAATACTaGCCATGGGCCCTGGAGGGACGTCTGCACCCCGAA +
Preference number: 3 (lower is better)
Translates to: HSIWGFITQVQY*PWALEGRLHPE
Trigger: TTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGCACCTGTGTTATGAACCCCCAGATGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp AGGTGCAATACTGACCATGGGCCCTGGAGGGACGTCTaGACCCCGAAGCCCCTGTACCTCAAACTCAGAGTT +
Preference number: 3 (lower is better)
Translates to: RCNTDHGPWRDV*TPKPLYLKLRV
Trigger: AACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp TCGTGCTGTGTATTTAAACGGCGCTTCCCACACACCTaGCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: SCCVFKRRFPHT*RLHPGRTPFGK
Trigger: TTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCGCCGTTTAAATACACAGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 72 bp TGCCTGGATGGCAGGCACAGTGGGAGAGTAATGCTCTaGACCTCCCAATGTGATGAAGCCGAAAGCCGAGGC +
Preference number: 3 (lower is better)
Translates to: CLDGRHSGRVML*TSQCDEAESRG
Trigger: GCCTCGGCTTTCGGCTTCATCACATTGGGAGGTTCAGAGCATTACTCTCCCACTGTGCCTGCCATCCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CCA 72 bp ACCCGTATCCCCCAAGCACCAAGGACATCCTCAGACTaGGACTTCTGTGTAATTCTGCACCTCCCAGCCATA +
Preference number: 3 (lower is better)
Translates to: TRIPQAPRTSSD*DFCVILHLPAI
Trigger: TATGGCTGGGAGGTGCAGAATTACACAGAAGTCCCAGTCTGAGGATGTCCTTGGTGCTTGGGGGATACGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR GCA 72 bp ACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTaGTGTGTATTTAAACGGCGCTTCCCACACACCTGC +
Preference number: 3 (lower is better)
Translates to: TRTGRSRYKDTS*CVFKRRFPHTC
Trigger: GCAGGTGTGTGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR TCA 72 bp CTTCCCGGCAGCCTTCCCTTTAGTGGGTATAGGTTTTaGCGTTCTGAGTTACTTTGTATCAAAGAGCTAATT +
Preference number: 3 (lower is better)
Translates to: LPGSLPFSGYRF*RSELLCIKELI
Trigger: AATTAGCTCTTTGATACAAAGTAACTCAGAACGTCAAAACCTATACCCACTAAAGGGAAGGCTGCCGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGCTGGGAGGCCGCCAGTaGAGGGCGAGCAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWALGGRQ*RASSPE
Trigger: CTCCGGGCTGCTCGCCCTGCACTGGCGGCCTCCCAG...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCGCCAGGTGGGCTTTCTaGGGAGGGCGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCARWAF*GGRGGG
Trigger: ACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGC...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCGTCTGGGGGTCCGTGTaGTGCGGCGTGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCVWGSV*CGVSWK
Trigger: CTTCCAGCTCACGCCGCACCACACGGACCCCCAGAC...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCGGAGCCGAGTCGGATaGCGCCCTACAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCRSRVG*RPTAQP
Trigger: TGGCTGTGCTGTAGGGCGCCATCCGACTCGGCTCCG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCATCCTGGAAGCGCTTaGCCGCCGCCTCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSHPGSA*PPPPGG
Trigger: CCCTCCGGGAGGCGGCGGCCAAGCGCTTCCAGGATG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCTGTCCAGCTGGATGTTaGCTGGGAGGCCGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCCPAGC*LGGRQC
Trigger: GCACTGGCGGCCTCCCAGCCAACATCCAGCTGGACA...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGGCATGGGCAGCTTGCTaGCGCCACTGGGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSAWAAC*RHWARP
Trigger: GGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGC...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCAGCGCCACTTGTCTATaGGCCGGGACGGCGTGCATC +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCSATCL*AGTACI
Trigger: GATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGTGGGCCGCAGACGCTaGCACGGGCTCCACATCCGC +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTVGRRR*HGLHIR
Trigger: GCGGATGTGGAGCCCGTGTCAGCGTCTGCGGCCCAC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCAGCCGCAGCTCCAGGTaGACTTTGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCSRSSR*TLPCTS
Trigger: GGAAGTGCAGGGCAAAGTGCACCTGGAGCTGCGGCT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCGTGTGGCGAGCTTGTaGCAGACGACCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCRVASL*QTTPVS
Trigger: AGACACTGGGGTCGTCTGCCACAAGCTCGCCACACG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGAGGGCGTGGCGGTGGTaGCAGCGGTTCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTRAWRW*QRFWER
Trigger: CCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCTGTGGGCTTCAACTGTaGGCTCCGCAGACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCCGLQL*APQTPG
Trigger: TCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACA...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTACGGGCCGTGGCTCCCTaGGGCTGGCTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLRAVAP*GWLWCG
Trigger: GCCACACCACAGCCAGCCTCAGGGAGCCACGGCCCG...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGAGCCAGGTGGGCTTTCTaGGGAGGGCGTGGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGARWAF*GGRGGG
Trigger: ACCACCGCCACGCCCTCCGCAGAAAGCCCACCTGGC...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGCGCTTCCCACACACCTaGCGTCTGCATCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTRFPHT*RLHPGR
Trigger: CCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCG...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCACCTCGCCCAGGATGTaGGCCGCAGACGCTGACACG +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGTSPRM*AADADT
Trigger: CGTGTCAGCGTCTGCGGCCCACATCCTGGGCGAGGT...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTAGCGTCCTGGACGTCTaGGGGTCCGTGTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSSVLDV*GSVWCG
Trigger: GCCGCACCACACGGACCCCCAGACGTCCAGGACGCT...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGCAGCTGGATGTTGGCTaGGAGGCCGCCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTQLDVG*EAASAG
Trigger: CCCTGCACTGGCGGCCTCCCAGCCAACATCCAGCTG...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGGGAGGCCGCCTCCCATaGCTGCCTGGATGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVGGRLP*LPGWQA
Trigger: TGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCC...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGGAGGCCGCCTCCCATaGCTGCCTGGATGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTGGRLP*LPGWQA
Trigger: TGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGGCTCCGCAGACGCCTaGAGAAGCTGGAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTGSADA*RSWSPH
Trigger: GTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCGGGAGGACGCCCTTTaGGAAAGGCCTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSREDAL*ERPPRQ
Trigger: CTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCCTGGGGGTCGTCAATaGCGAACGTCGAATACTCCT +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCPGGRQ*RTSNTP
Trigger: AGGAGTATTCGACGTTCGTCATTGACGACCCCCAGG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTTGGGGGTCCGTGTGGTaGGGCGTGAGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSWGSVW*GVSWKR
Trigger: CCTCTTCCAGCTCACGCCGCACCACACGGACCCCCA...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTTGGGCCGGGACGGCGTaGATCTCACTTTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSWAGTA*ISLCRL
Trigger: GAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCA...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGGCCGCCTCCCATGGCTaGCTGGATGGCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKAASHG*LDGRHS
Trigger: ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGC...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCCCCTGGAGGGACGTCTaGACCCCGAAGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTPWRDV*TPKPLY
Trigger: GTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGG...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGGCTCCGCAGACGCCTaGAGAAGCTGGAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTGSADA*RSWSPH
Trigger: GTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTGGCGGGCTTCAGGGTaGCATGCAGGTAATGCATCC +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWAWRASG*HAGNAS
Trigger: GGATGCATTACCTGCATGTCACCCTGAAGCCCGCCA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGAGAAGATGTCACACATaGCGGTCGGGCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWARRCHT*RSGSSP
Trigger: GGGTGAGCTGCCCGACCGTCATGTGTGACATCTTCT...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCGAGTCAGCGTCCACGTaGTGCAGCTGGAACCAGGTG +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGESAST*CSWNQV
Trigger: CACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTC...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGGGACGGCCGCCTCCTaGTTCTCCCGGCAAACCTCG +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLGTAAS*FSRQTS
Trigger: CGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCC...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTGGACTTGGACAGGCTaGCGAGGGTCTGAACGGTCT +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWAWTWTG*RGSERS
Trigger: AGACCGTTCAGACCCTCGGCAGCCTGTCCAAGTCCA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGTACTGGGCGTGCTCCTaGTCCAAAGCCCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSYWACS*SKAPTP
Trigger: TGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTA...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCTCCCTCCCAAAGGCTaGGGCTTTGCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSLPPKG*GFAWAA
Trigger: AGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCACACACCTGCCGTCTaGATCCCGGGAGGACGCCCT +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCHTPAV*IPGGRP
Trigger: AGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCACGATGGGGAGGCCCTaGCACTCGACGATGCGTGTG +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTTMGRP*HSTMRV
Trigger: CACACGCATCGTCGAGTGCCAGGGCCTCCCCATCGT...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCCCATTGTCCCGGGGCTaGAGGAAGTACCACGCCTCG +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTPLSRG*RKYHAS
Trigger: CGAGGCGTGGTACTTCCTCCAGCCCCGGGACAATGG...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTCCATTGTCCCGGGGCTaGAGGAAGTACCACGCCTCG +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSPLSRG*RKYHAS
Trigger: CGAGGCGTGGTACTTCCTCCAGCCCCGGGACAATGG...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTGTCCAGCTGGATGTTaGCTGGGAGGCCGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKCPAGC*LGGRQC
Trigger: GCACTGGCGGCCTCCCAGCCAACATCCAGCTGGACA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCGCATGGGCAGCTTGCTaGCGCCACTGGGCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAAWAAC*RHWARP
Trigger: GGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGC...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGATTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGFHRAR*AFCGGR
Trigger: ACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAA...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGTGGGCTTCAACTGTaGGCTCCGCAGACGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTCGLQL*APQTPG
Trigger: TCCAGGCGTCTGCGGAGCCCACAGTTGAAGCCCACA...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCACTGACCATGGGCCCTaGAGGGACGTCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCTDHGP*RDVCTP
Trigger: CGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGT...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 72 bp CTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTaGCATGGGCAGCTTGCTGGCGCCACTGGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LFLLFSLPKAAA*HGQLAGATGRV
Trigger: GACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 72 bp GGCAGCGGTTCTGGGAGAGGGAAACCCCAGCGCCACTaGTCTATGGGCCGGGACGGCGTGCATCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GSGSGRGKPQRH*SMGRDGVHLTL
Trigger: CAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCCCTCTCCCAGAACCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCACCCCAGACTCAGTaGTGGCGTGGAAGACGCGGT +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTSPQTQ*WRGRRG
Trigger: ACCGCGTCTTCCACGCCATCACTGAGTCTGGGGTGA...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGCCCCAACCCCAGCGATaGCTTGCTTTAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWAPQPQR*LALASC
Trigger: ACAAGACGCTAAAGCAAGTCATCGCTGGGGTTGGGG...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGAGCAATCCCTCATCTTaGTCGGCCCCGGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTSNPSS*SAPGKR
Trigger: CCTCTTACCCGGGGCCGAGCAAGATGAGGGATTGCT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCGCTCCAGGTGCACTTTaGCCTGCACTTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGAPGAL*PALPSQ
Trigger: CTGACTCGGAAGTGCAGGGCAAAGTGCACCTGGAGC...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGAGCCGCAGCTCCAGGTaGACTTTGCCCTGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKSRSSR*TLPCTS
Trigger: GGAAGTGCAGGGCAAAGTGCACCTGGAGCTGCGGCT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCTCCCACAGGCCTCCTaGATCTTCTCCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSLPQAS*IFSSLL
Trigger: GAGCAAGCTGGAGAAGATGCAGGAGGCCTGTGGGAG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTACTGGGCGTGCTCCTaGTCCAAAGCCCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKYWACS*SKAPTP
Trigger: TGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGACACACGGCCGGAGGTaGATGTCACAGTCGACTAGA +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWATHGRR*MSQSTR
Trigger: TCTAGTCGACTGTGACATGCACCTCCGGCCGTGTGT...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTGCGTCACACGCACCGTaGACGCAAGACAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSASHAP*TQDRRA
Trigger: TGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGC...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCATGGTGTTGGGGTCCTaGGTCCGCTTCACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCMVLGS*VRFTSA
Trigger: CGCGGAGGTGAAGCGGACCCAGGACCCCAACACCAT...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGTCCCCGCCAGCTTCATaGTCTCGTCGATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSSPPAS*SRRCTW
Trigger: CCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGA...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAACGTCCGGGTCATCCTaGAAGCGCTTGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWATSGSS*KRLAAA
Trigger: GGCGGCGGCCAAGCGCTTCCAGGATGACCCGGACGT...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCGGTTGGGGGAGAGAATaGCGGGCGCAAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGGWGRE*RAQRTS
Trigger: TGAGGTTCTTTGCGCCCGCCATTCTCTCCCCCAACC...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGGTTGGGGGAGAGAATaGCGGGCGCAAAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTGWGRE*RAQRTS
Trigger: TGAGGTTCTTTGCGCCCGCCATTCTCTCCCCCAACC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCTCCAAGGGACTCTGTaGACAGAACCCGTATCCCCC +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSLQGTL*TEPVSP
Trigger: GGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTGGCGGGCTTCAGGGTaGCATGCAGGTAATGCATCC +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKWRASG*HAGNAS
Trigger: GGATGCATTACCTGCATGTCACCCTGAAGCCCGCCA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGTCACTGCAGTGTACCTaGCGTCCGGGTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVSLQCT*RPGHPG
Trigger: TCCAGGATGACCCGGACGTCAGGTACACTGCAGTGA...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCGTGTGGTGCGGCGTaGGCTGGAAGAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFPCGAA*AGRGWG
Trigger: CCCCCAACCTCTTCCAGCTCACGCCGCACCACACGG...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCCCTGGGGGTCGTCAATaGCGAACGTCGAATACTCCT +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGPGGRQ*RTSNTP
Trigger: AGGAGTATTCGACGTTCGTCATTGACGACCCCCAGG...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCGGGAGAGTAATGCTCTaGACCTCCCAATGTGATGAA +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCGRVML*TSQCDE
Trigger: TTCATCACATTGGGAGGTTCAGAGCATTACTCTCCC...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGTGCAGCTGGCCTTCCTaGGACAGGCTCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVCSWPS*DRLHSC
Trigger: ACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCA...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGACACAGGTGCAATACTaGCCATGGGCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKTQVQY*PWALEG
Trigger: TCCCTCCAGGGCCCATGGTCAGTATTGCACCTGTGT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTGCCTCCTCGGCAGTGTaGGGTCTGGAGGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPASSAV*GLEGSA
Trigger: GGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGC...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGAGCAATCCCTCATCTTaGTCGGCCCCGGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKSNPSS*SAPGKR
Trigger: CCTCTTACCCGGGGCCGAGCAAGATGAGGGATTGCT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGCTGGCTTTAGGCTCTTaGTACCATTGTCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTLALGS*YHCPGA
Trigger: AGCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAG...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGTCGAATACTCCTCCTaGTCCGGGCCGTCATACACA +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTVEYSS*SGPSYT
Trigger: TGTGTATGACGGCCCGGAGCAGGAGGAGTATTCGAC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGCTCTTATACTGGGCGTaGTCCTGCTCCAAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSLLYWA*SCSKAP
Trigger: TGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAG...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTCACTTTGCCGGCTCTaGGCTCTTCCTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWASLCRL*ALPSLL
Trigger: GAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCCCCTGGAGGGACGTCTaGACCCCGAAGCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAPWRDV*TPKPLY
Trigger: GTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGG...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGTTGATCTTCACGCTCTaGAAGACCCGGAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVLIFTL*KTRSPS
Trigger: CGAGGGGCTCCGGGTCTTCCAGAGCGTGAAGATCAA...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCCTGAAAACCTCCTCCTaGTCCAGGTTCACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGLKTSS*SRFTVQ
Trigger: CTGCACGGTGAACCTGGACCAGGAGGAGGTTTTCAG...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTACTCGACGATGCGTGTaGCGAGCTTGTGGCAGACGA +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSTRRCV*RACGRR
Trigger: TCGTCTGCCACAAGCTCGCCACACGCATCGTCGAGT...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGACGCCTCGTAGGAGCTaGACTGCCGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKTPRRS*TAAGLS
Trigger: TGAAAGTCCTGCGGCAGTCCAGCTCCTACGAGGCGT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCTGGTGCGGCGTGAGCTaGAAGAGGTTGGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCWCGVS*KRLGER
Trigger: TCTCTCCCCCAACCTCTTCCAGCTCACGCCGCACCA...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGTACAGCGCACGCTCTaGCTGGATGACCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTVQRTL*LDDLEH
Trigger: ATGTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTAC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGACGGTGAGGCGCTTCTaGTTGCACTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTTVRRF*LHWLTL
Trigger: CAAAGTGAGCCAGTGCAACCAGAAGCGCCTCACCGT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGAGCTCTTGTCTCCGATaGGGTGCTCCTGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTSSCLR*GAPGFH
Trigger: ATGGAAGCCAGGAGCACCCCATCGGAGACAAGAGCT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCGCTTGCTGGCGCCACTaGGCGCGTCCCGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAACWRH*ARPADF
Trigger: AAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGC...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCGGCTGCGGCTTTGCATaGGCAGCTTGCTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAGCGFA*AACWRH
Trigger: GTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCC...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGTTTCTGCGGAGGGCGTaGCGGTGGTGGCAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRFLRRA*RWWQRF
Trigger: GAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAA...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTATTCCACAGGGCCAGGTaGGCTTTCTGCGGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLFHRAR*AFCGGR
Trigger: ACGCCCTCCGCAGAAAGCCCACCTGGCCCTGTGGAA...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTAACGAACCTCGAAAGTaGAACAGGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSNEPRK*NREAAS
Trigger: GGAGGCGGCCTCCCTGTTCCACTTTCGAGGTTCGTT...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTACTGACCATGGGCCCTaGAGGGACGTCTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSTDHGP*RDVCTP
Trigger: CGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGT...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCACGGGAGGACGCCCTTTaGGAAAGGCCTCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWAREDAL*ERPPRQ
Trigger: CTGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCG...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTGGCTTCACCGATCTTaGTCTTCACGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWAWLHRS*SSRSGR
Trigger: TCTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCCGTGTGGTGCGGCGTaGGCTGGAAGAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKPCGAA*AGRGWG
Trigger: CCCCCAACCTCTTCCAGCTCACGCCGCACCACACGG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGAAGGCTGCCGAGGGTCTaGACGGTCTTGGAGATCAAT +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGRLPRV*TVLEIN
Trigger: ATTGATCTCCAAGACCGTTCAGACCCTCGGCAGCCT...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACGGGCCGTGGCTCCCTaGGGCTGGCTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPRAVAP*GWLWCG
Trigger: GCCACACCACAGCCAGCCTCAGGGAGCCACGGCCCG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGCTGGCTTTAGGCTCTTaGTACCATTGTCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKLALGS*YHCPGA
Trigger: AGCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAG...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTCATGGTCTCGTCGATaGACTTGGACGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTSWSRR*TWTPVS
Trigger: ACTCACTGGCGTCCAAGTGCATCGACGAGACCATGA...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGACGCGGTCCACATACTaGCGTAGGTTCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSTRSTY*RRFSML
Trigger: CAACATGGAGAACCTACGGCAGTATGTGGACCGCGT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTTAAGCACGATGGGCTaGTCAACACTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LPPKGCGFAWAACWRHWALSTMG*STLLGS
Trigger: AGACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTGTTCTCGATGGGAATaGTGTAGAGAGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGCSRWE*CREAGP
Trigger: GGGACCAGCCTCTCTACAGCATTCCCATCGAGAACA...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGTTTGCATGGGCAGCTTaGTGGCGCCACTGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRFAWAA*WRHWAR
Trigger: ACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAA...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGACACACGGCCGGAGGTaGATGTCACAGTCGACTAGA +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKTHGRR*MSQSTR
Trigger: TCTAGTCGACTGTGACATGCACCTCCGGCCGTGTGT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCACTGCCAGCGTCACGGTaGCGTAGGGGTCACATTGCC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWALPASR*RRGHIA
Trigger: GGCAATGTGACCCCTACGCCACCGTGACGCTGGCAG...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGACTCAGTGATGGCGTaGAAGACGCGGTCCACATAC +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTDSVMA*KTRSTY
Trigger: GTATGTGGACCGCGTCTTCCACGCCATCACTGAGTC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGTCTGGGGGTCCGTGTaGTGCGGCGTGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLVWGSV*CGVSWK
Trigger: CTTCCAGCTCACGCCGCACCACACGGACCCCCAGAC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCGCAGATTTGGACTTaGACAGGCTGCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTSQIWT*TGCRGS
Trigger: AGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGA...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTTCGCAGATTTGGACTTaGACAGGCTGCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSSQIWT*TGCRGS
Trigger: AGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGA...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGAAGCGCTTCCGTCCTTaGGCCCTCTTGATCATGAAC +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSKRFRP*ALLIMN
Trigger: GTTCATGATCAAGAGGGCCCAAGGACGGAAGCGCTT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCCTCCACGCAGTTGTTaGCCTGGATGTACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCPPRSC*PGCTAH
Trigger: GTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGG...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTGTCGATCCAGTCCTTaGCCTCCACGCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKCRSSP*PPRSCW
Trigger: CCAACAACTGCGTGGAGGCCAAGGACTGGATCGACA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTAGCGCCACTTGTCTATaGGCCGGGACGGCGTGCATC +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSSATCL*AGTACI
Trigger: GATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCT...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGAGGGCGTGGCGGTGGTaGCAGCGGTTCTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKRAWRW*QRFWER
Trigger: CCTCTCCCAGAACCGCTGCCACCACCGCCACGCCCT...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGGATGGCAGGCACAGTaGGAGAGTAATGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTGWQAQ*ESNALN
Trigger: GTTCAGAGCATTACTCTCCCACTGTGCCTGCCATCC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
3UTR CAA 72 bp CACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCCTTCTCTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: HLSMGRDGVHLT*PALRSSFSSPS
Trigger: GGAGGGAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTGGCCACCTTCCCTATaGTGGAATCCCTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKWPPSL*WNPSGK
Trigger: TTTTCCGGAGGGATTCCATCATAGGGAAGGTGGCCA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGACTGGCTCACTTTGGTaGGAATGTCGATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSTGSLW*ECRSSP
Trigger: AGGACTGGATCGACATTCTCACCAAAGTGAGCCAGT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTACGGGTGGTAGACGGTaGGGCGCTTCTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSTGGRR*GASGCT
Trigger: AGTGCAACCAGAAGCGCCTCACCGTCTACCACCCGT...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGTCAGCGTCCACGTGCTaGAGCTGGAACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRSASTC*SWNQVS
Trigger: GGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGA...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCAAAGTGGGACTTCTTaGTGTAGCTACAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCQSGTS*CSYRAG
Trigger: CCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTG...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGACGCGGTCCACATACTaGCGTAGGTTCTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKTRSTY*RRFSML
Trigger: CAACATGGAGAACCTACGGCAGTATGTGGACCGCGT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGATGTTCTCGATGGGAATaGTGTAGAGAGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGCSRWE*CREAGP
Trigger: GGGACCAGCCTCTCTACAGCATTCCCATCGAGAACA...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGACGTCATACACAGATTTaGTCCCACAGGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGRHTQI*SHRPPA
Trigger: TGCAGGAGGCCTGTGGGAGCAAATCTGTGTATGACG...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCTCCCTCCCAAAGGCTaGGGCTTTGCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSLPPKG*GFAWAA
Trigger: AGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCACACACCTGCCGTCTaGATCCCGGGAGGACGCCCT +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKHTPAV*IPGGRP
Trigger: AGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAATTGCCCATTCACGATaGGGAGGCCCTGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLIAHSR*GGPGTR
Trigger: TCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAAT...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCAGTTTCCTCGGAAGATaGTGTTGGGGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCSFLGR*CWGPGS
Trigger: GGACCCAGGACCCCAACACCATCTTCCGAGGAAACT...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGAGCGTCCTGGACGTCTaGGGGTCCGTGTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLSVLDV*GSVWCG
Trigger: GCCGCACCACACGGACCCCCAGACGTCCAGGACGCT...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCGGAGCCGAGTCGGATaGCGCCCTACAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKRSRVG*RPTAQP
Trigger: TGGCTGTGCTGTAGGGCGCCATCCGACTCGGCTCCG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGTGGTGGCAGCGGTTCTaGGAGAGGGAAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLWWQRF*ERETPA
Trigger: CGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCA...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGTCACTGCAGTGTACCTaGCGTCCGGGTCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRSLQCT*RPGHPG
Trigger: TCCAGGATGACCCGGACGTCAGGTACACTGCAGTGA...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGAGACGTGCACGAGACTaGCGCACACACGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLRRARD*RTHGRR
Trigger: CCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCT...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCAGTGGGTATAGGTTTTaGCGTTCTGAGTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCSGYRF*RSELLC
Trigger: ACAAAGTAACTCAGAACGTCAAAACCTATACCCACT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCTGCAGCTGGCCTTCCTaGGACAGGCTCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFACSWPS*DRLHSC
Trigger: ACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCA...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAACACAGGTGCAATACTaGCCATGGGCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWATQVQY*PWALEG
Trigger: TCCCTCCAGGGCCCATGGTCAGTATTGCACCTGTGT...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGAGTCAGCGTCCACGTaGTGCAGCTGGAACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLESAST*CSWNQV
Trigger: CACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCGCTCCAGGTGCACTTTaGCCTGCACTTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAAPGAL*PALPSQ
Trigger: CTGACTCGGAAGTGCAGGGCAAAGTGCACCTGGAGC...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTACACGCAAGACAGACGTaGACGAGACTGACGCACACA +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLHARQT*TRLTHT
Trigger: TGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTG...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGCGTCACACGCACCGTaGACGCAAGACAGACGTGCA +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLASHAP*TQDRRA
Trigger: TGCACGTCTGTCTTGCGTGCACGGTGCGTGTGACGC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCTCCACGTGCTGCAGCTaGAACCAGGTGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFASTCCS*NQVSLL
Trigger: CAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGA...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGCTGCCAGCGTCACGGTaGCGTAGGGGTCACATTGCC +
Preference number: 4 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSLPASR*RRGHIA
Trigger: GGCAATGTGACCCCTACGCCACCGTGACGCTGGCAG...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTACGCCTCGTAGGAGCTaGACTGCCGCAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSTPRRS*TAAGLS
Trigger: TGAAAGTCCTGCGGCAGTCCAGCTCCTACGAGGCGT...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGACCTCGCCCAGGATGTaGGCCGCAGACGCTGACACG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLTSPRM*AADADT
Trigger: CGTGTCAGCGTCTGCGGCCCACATCCTGGGCGAGGT...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCAACGTCCGGGTCATCCTaGAAGCGCTTGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPTSGSS*KRLAAA
Trigger: GGCGGCGGCCAAGCGCTTCCAGGATGACCCGGACGT...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCAGCGCACGCTCTGGCTaGATGACCTGGAACATGTTT +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCSARSG*MTWNMF
Trigger: AAACATGTTCCAGGTCATCCAGCCAGAGCGTGCGCT...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGACGCTTCTGGTTGCACTaGCTCACTTTGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGRFWLH*LTLVRM
Trigger: CATTCTCACCAAAGTGAGCCAGTGCAACCAGAAGCG...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTTGTCCCTCTTATACTaGGCGTGCTCCTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTLSLLY*ACSCSK
Trigger: TTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAA...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGGCTTGCTGGCGCCACTaGGCGCGTCCCGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLACWRH*ARPADF
Trigger: AAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGC...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCAACGAACCTCGAAAGTaGAACAGGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFANEPRK*NREAAS
Trigger: GGAGGCGGCCTCCCTGTTCCACTTTCGAGGTTCGTT...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCCACAATTTTGGTCCTaGAAACCTCCTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCPQFWS*KPPPGP
Trigger: TGGACCAGGAGGAGGTTTTCAGGACCAAAATTGTGG...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCCCCAACCCCAGCGATaGCTTGCTTTAGCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSPQPQR*LALASC
Trigger: ACAAGACGCTAAAGCAAGTCATCGCTGGGGTTGGGG...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCAGACGTGCACGAGACTaGCGCACACACGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTRRARD*RTHGRR
Trigger: CCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCT...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGGGAGAGTAATGCTCTaGACCTCCCAATGTGATGAA +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTGRVML*TSQCDE
Trigger: TTCATCACATTGGGAGGTTCAGAGCATTACTCTCCC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTCTGTTGTGGTACTTCTaGAAGTCCTCCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSLLWYF*KSSFWM
Trigger: CATCCAGAAGGAGGACTTGCAGAAGTACCACAACAG...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTTCAGCGTCCACGTGCTaGAGCTGGAACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLSASTC*SWNQVS
Trigger: GGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGA...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTGATGAAGCTGCTCACTaGAGTGTACCTGACGTCCGG +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSDEAAH*SVPDVR
Trigger: CCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATC...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCATGGGGGTCCGTGTGGTaGGGCGTGAGCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPWGSVW*GVSWKR
Trigger: CCTCTTCCAGCTCACGCCGCACCACACGGACCCCCA...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCTGGACTTGGACAGGCTaGCGAGGGTCTGAACGGTCT +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFWTWTG*RGSERS
Trigger: AGACCGTTCAGACCCTCGGCAGCCTGTCCAAGTCCA...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCAAAGGCTGCGGCTTTaGATGGGCAGCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKQRLRL*MGSLLA
Trigger: CGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCAAAGGCTGCGGCTTTaGATGGGCAGCTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLQRLRL*MGSLLA
Trigger: CGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTG...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCGCGTGCATCTCACTTTaGCGGCTCTGCGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFACISL*RLCALP
Trigger: AGGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGC...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCACATTCCTGTTCCATTTaGCTTCCCGGCAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWAHSCSI*LPGSLP
Trigger: GGGAAGGCTGCCGGGAAGGCAAATGGAACAGGAATG...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCAAAATTGCAGCTCAGTaGAGCCCCAACAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GNPSATCLWAGTACISLCKIAAQ*SPNSCV
Trigger: CACACAGCTGTTGGGGCTGCACTGAGCTGCAATTTT...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCTGAAAACCTCCTCCTaGTCCAGGTTCACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSLKTSS*SRFTVQ
Trigger: CTGCACGGTGAACCTGGACCAGGAGGAGGTTTTCAG...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCTCCACGTGCTGCAGCTaGAACCAGGTGTCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFSTCCS*NQVSLL
Trigger: CAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGA...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCGTGTGGCGAGCTTGTaGCAGACGACCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLRVASL*QTTPVS
Trigger: AGACACTGGGGTCGTCTGCCACAAGCTCGCCACACG...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTACTCGACGATGCGTGTaGCGAGCTTGTGGCAGACGA +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPTRRCV*RACGRR
Trigger: TCGTCTGCCACAAGCTCGCCACACGCATCGTCGAGT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCCGAACTGGGGATTGTTaGTCTTCCTCTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTRTGDC*SSSSLS
Trigger: CGAAAGTGAAGAGGAAGACCAACAATCCCCAGTTCG...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGATGGCACTGATGAATaGCACCACCCTGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLDGTDE*HHPAIV
Trigger: CACTATGGCAGGGTGGTGCCATTCATCAGTGCCATC...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCACAGGGTTTGTGGCTCTaGCATATCTCCTCGATGGCG +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWAQGLWL*HISSMA
Trigger: CGCCATCGAGGAGATATGCCAGAGCCACAAACCCTG...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGATTTCACAGGGTTTGTaGCTCTGGCATATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKISQGL*LWHISS
Trigger: CGAGGAGATATGCCAGAGCCACAAACCCTGTGAAAT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCGCTGCTCAACACTCTTaGGGTCTCTTCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFAAQHS*GLFSPR
Trigger: CCTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGC...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGCTGCTCAACACTCTTaGGGTCTCTTCTCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLAAQHS*GLFSPR
Trigger: CCTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAACGCAGTTGTTGGCCTaGATGTACAGCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWATQLLA*MYSARS
Trigger: AGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGT...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTCCACGCAGTTGTTaGCCTGGATGTACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFPPRSC*PGCTAH
Trigger: GTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGG...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACAGCTGGATGTTGGCTaGGAGGCCGCCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPQLDVG*EAASAG
Trigger: CCCTGCACTGGCGGCCTCCCAGCCAACATCCAGCTG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACGACTAGACGGGCCGTaGCTCCCTGAGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPRLDGP*LPEAGC
Trigger: ACAGCCAGCCTCAGGGAGCCACGGCCCGTCTAGTCG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGGATGGCAGGCACAGTaGGAGAGTAATGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLGWQAQ*ESNALN
Trigger: GTTCAGAGCATTACTCTCCCACTGTGCCTGCCATCC...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGAGGACATCCTCAGACTaGGACTTCTGTGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTRTSSD*DFCVIL
Trigger: CAGAATTACACAGAAGTCCCAGTCTGAGGATGTCCT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGTGCTCATGTACAAGTTaGAGAGGGAGTAGATACGCT +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKCSCTS*RGSRYA
Trigger: AGCGTATCTACTCCCTCTTCAACTTGTACATGAGCA...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCATCACTTTGCCGGCTCTaGGCTCTTCCTTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWASLCRL*ALPSLL
Trigger: GAGAAGAGAAGGAAGAGCGCAGAGCCGGCAAAGTGA...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCCGCCTCCCATGGCTaGCTGGATGGCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGAASHG*LDGRHS
Trigger: ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGC...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCGCTTCCCACACACCTaGCGTCTGCATCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGRFPHT*RLHPGR
Trigger: CCTCCCGGGATGCAGACGGCAGGTGTGTGGGAAGCG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTACAAGGATACGTCGTaGTGTGTATTTAAACGGCGC +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTYKDTS*CVFKRR
Trigger: GCGCCGTTTAAATACACAGCACGACGTATCCTTGTA...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAAAAATTGCAGCTCAGTaGAGCCCCAACAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLKIAAQ*SPNSCV
Trigger: CACACAGCTGTTGGGGCTGCACTGAGCTGCAATTTT...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGTTGATCTTCACGCTCTaGAAGACCCGGAGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSLIFTL*KTRSPS
Trigger: CGAGGGGCTCCGGGTCTTCCAGAGCGTGAAGATCAA...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCTGCAAGTCCTCCTTCTaGATGGCCACCTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFACKSSF*MATFPM
Trigger: CATAGGGAAGGTGGCCATCCAGAAGGAGGACTTGCA...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCAGGTGTCCCTGTTGTaGTACTTCTGCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSQVSLL*YFCKSS
Trigger: GGAGGACTTGCAGAAGTACCACAACAGGGACACCTG...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGATTGCCCATTCACGATaGGGAGGCCCTGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKIAHSR*GGPGTR
Trigger: TCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAAT...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGAACACTTCATCGAACTaGGGATTGTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVNTSSN*GLLVFL
Trigger: GAGGAAGACCAACAATCCCCAGTTCGATGAAGTGTT...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTTCAGAAGAAAACACGTaGTCTTCCGTGTATACCACG +
Preference number: 4 (lower is better)
Translates to: RKWNREAASHGCLDGRHSSEENT*SSVYTT
Trigger: CGTGGTATACACGGAAGACCACGTGTTTTCTTCTGA...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGCTCGGAAGATGGTGTTaGGGTCCTGGGTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSLGRWC*GPGSAS
Trigger: TGAAGCGGACCCAGGACCCCAACACCATCTTCCGAG...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGGGTCTGAACGGTCTTaGAGATCAATGTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWAGSERS*RSMSAS
Trigger: GGACGCTGACATTGATCTCCAAGACCGTTCAGACCC...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTGGGTCTGAACGGTCTTaGAGATCAATGTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSGSERS*RSMSAS
Trigger: GGACGCTGACATTGATCTCCAAGACCGTTCAGACCC...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCAAGCGCTTCCGTCCTTaGGCCCTCTTGATCATGAAC +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAKRFRP*ALLIMN
Trigger: GTTCATGATCAAGAGGGCCCAAGGACGGAAGCGCTT...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTACCCGCAGACTTTAAATaGAATGAGTGGAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLPADFK*NEWRSR
Trigger: CCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGG...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTTTCTGCGGAGGGCGTaGCGGTGGTGGCAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGFLRRA*RWWQRF
Trigger: GAACCGCTGCCACCACCGCCACGCCCTCCGCAGAAA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGAGGACATCCTCAGACTaGGACTTCTGTGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKRTSSD*DFCVIL
Trigger: CAGAATTACACAGAAGTCCCAGTCTGAGGATGTCCT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCTGGCTTCACCGATCTTaGTCTTCACGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAWLHRS*SSRSGR
Trigger: TCTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCA...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGTGGGCCGCAGACGCTaGCACGGGCTCCACATCCGC +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSVGRRR*HGLHIR
Trigger: GCGGATGTGGAGCCCGTGTCAGCGTCTGCGGCCCAC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCATCACCCCAGACTCAGTaGTGGCGTGGAAGACGCGGT +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPSPQTQ*WRGRRG
Trigger: ACCGCGTCTTCCACGCCATCACTGAGTCTGGGGTGA...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGAGAACCTCAGGAAGATaGAGCTGCTCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRRTSGR*SCSLQC
Trigger: ACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCT...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGACATGTTTTTCATTTTaGAAGACTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHRATEPSVTRTVHARQTTCFSF*KTPPPA
Trigger: AGCTGGAGGAGGAGTCTTTCAAAATGAAAAACATGT...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGCACGCTCTGGCTGGATaGCCTGGAACATGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRHALAG*PGTCFS
Trigger: TGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTG...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCACGGGTGGTAGACGGTaGGGCGCTTCTGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTTGGRR*GASGCT
Trigger: AGTGCAACCAGAAGCGCCTCACCGTCTACCACCCGT...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTAAGCACAGAATCAAATaGCGACACGTTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KTDVHETDAHTAGGACHSKHRIK*RHVPQG
Trigger: GCCCTGTGGAACGTGTCGTCATTTGATTCTGTGCTT...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGGATGAAGCTGCTCACTaGAGTGTACCTGACGTCCGG +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKDEAAH*SVPDVR
Trigger: CCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATC...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCTCTTATACTGGGCGTaGTCCTGCTCCAAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKLLYWA*SCSKAP
Trigger: TGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTTTGCATGGGCAGCTTaGTGGCGCCACTGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGFAWAA*WRHWAR
Trigger: ACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGAAGAAAGTTCCTATCTaGCATCTAGATCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSKKVPI*HLDQEP
Trigger: AGGCTCTTGATCTAGATGGCAGATAGGAACTTTCTT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGCATCCTGGAAGCGCTTaGCCGCCGCCTCCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTHPGSA*PPPPGG
Trigger: CCCTCCGGGAGGCGGCGGCCAAGCGCTTCCAGGATG...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTAGCGCACGCTCTGGCTaGATGACCTGGAACATGTTT +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPSARSG*MTWNMF
Trigger: AAACATGTTCCAGGTCATCCAGCCAGAGCGTGCGCT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTGGTGGCAGCGGTTCTaGGAGAGGGAAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGWWQRF*ERETPA
Trigger: CGCTGGGGTTTCCCTCTCCCAGAACCGCTGCCACCA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTCCACAATTTTGGTCCTaGAAACCTCCTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPPQFWS*KPPPGP
Trigger: TGGACCAGGAGGAGGTTTTCAGGACCAAAATTGTGG...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCACGCTCTGGCTGGATaGCCTGGAACATGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFHALAG*PGTCFS
Trigger: TGAAAAACATGTTCCAGGTCATCCAGCCAGAGCGTG...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCCATATTTCGTCTTCTTaGACTTGTCCCTCTTATACT +
Preference number: 4 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGHISSS*TCPSYT
Trigger: AGTATAAGAGGGACAAGTTCAAGAAGACGAAATATG...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGGCCTCCTCGGCAGTGTaGGGTCTGGAGGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTASSAV*GLEGSA
Trigger: GGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGC...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGCCTCCAGTATTTTTGTaGCAAGAAAGTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVPPVFL*QESSYL
Trigger: CAGATAGGAACTTTCTTGTCACAAAAATACTGGAGG...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGGGTCCAGGTTCACCGTaGAGTAGCAATCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKGPGSP*SSNPSS
Trigger: AGATGAGGGATTGCTACTGCACGGTGAACCTGGACC...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGGGACGGCCGCCTCCTaGTTCTCCCGGCAAACCTCG +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSGTAAS*FSRQTS
Trigger: CGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCTTAAGCACGATGGGCTaGTCAACACTCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFLSTMG*STLLGS
Trigger: AGACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAA...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCCTCCCACAGGCCTCCTaGATCTTCTCCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTLPQAS*IFSSLL
Trigger: GAGCAAGCTGGAGAAGATGCAGGAGGCCTGTGGGAG...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCAAGAAAGTTCCTATCTaGCATCTAGATCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTKKVPI*HLDQEP
Trigger: AGGCTCTTGATCTAGATGGCAGATAGGAACTTTCTT...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACTCGGAAGATGGTGTTaGGGTCCTGGGTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPLGRWC*GPGSAS
Trigger: TGAAGCGGACCCAGGACCCCAACACCATCTTCCGAG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCATCAATGTCAGCGTCCTaGACGTCTGGGGGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPSMSAS*TSGGPC
Trigger: ACACGGACCCCCAGACGTCCAGGACGCTGACATTGA...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCAGGATGTTCTCGATaGGAATGCTGTAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFPGCSR*ECCREA
Trigger: AGCCTCTCTACAGCATTCCCATCGAGAACATCCTGG...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGATCTGGCTGGATGACCTaGAACATGTTTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGSGWMT*NMFFIL
Trigger: CAAAATGAAAAACATGTTCCAGGTCATCCAGCCAGA...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGACGGTGAGGCGCTTCTaGTTGCACTGGCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLTVRRF*LHWLTL
Trigger: CAAAGTGAGCCAGTGCAACCAGAAGCGCCTCACCGT...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCCCATCAATGTCCAGCTaGATGTTGGCTGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTPSMSS*MLAGRP
Trigger: CGGCCTCCCAGCCAACATCCAGCTGGACATTGATGG...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCCGATGGGGTGCTCCTaGCTTCCATATTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLPMGCS*LPYFVF
Trigger: GAAGACGAAATATGGAAGCCAGGAGCACCCCATCGG...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTCCCGCAGACTTTAAATaGAATGAGTGGAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPPADFK*NEWRSR
Trigger: CCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGG...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCGCACTTGGACGCCAGTaGGTTTCCTCGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTALGRQ*VSSEDG
Trigger: ACCATCTTCCGAGGAAACTCACTGGCGTCCAAGTGC...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTAGAACCTCAGGAAGATaGAGCTGCTCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLRTSGR*SCSLQC
Trigger: ACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCT...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCCAAAGTGGGACTTCTTaGTGTAGCTACAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTQSGTS*CSYRAG
Trigger: CCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTG...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCCTCCAGCTTCTCCACTaGCAGGATGTTCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTLQLLH*QDVLDG
Trigger: CCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAG...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACATTCCTGTTCCATTTaGCTTCCCGGCAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPHSCSI*LPGSLP
Trigger: GGGAAGGCTGCCGGGAAGGCAAATGGAACAGGAATG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCACAAACTTCAGGTTACTaGCATTCCAGAGGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LCALPSLLPPKGCGFAWAQTSGY*HSRGQL
Trigger: GAGTTGACCTCTGGAATGCCAGTAACCTGAAGTTTG...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCAGTTTCCTCGGAAGATaGTGTTGGGGTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTSFLGR*CWGPGS
Trigger: GGACCCAGGACCCCAACACCATCTTCCGAGGAAACT...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTCCCCGCCAGCTTCATaGTCTCGTCGATGCACTTGG +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGSPPAS*SRRCTW
Trigger: CCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTATTTCACAGGGTTTGTaGCTCTGGCATATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPISQGL*LWHISS
Trigger: CGAGGAGATATGCCAGAGCCACAAACCCTGTGAAAT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTCAATGTCAGCGTCCTaGACGTCTGGGGGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGSMSAS*TSGGPC
Trigger: ACACGGACCCCCAGACGTCCAGGACGCTGACATTGA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCATGTCGATCCAGTCCTTaGCCTCCACGCAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPCRSSP*PPRSCW
Trigger: CCAACAACTGCGTGGAGGCCAAGGACTGGATCGACA...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCGCTTCTGGTTGCACTaGCTCACTTTGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKRFWLH*LTLVRM
Trigger: CATTCTCACCAAAGTGAGCCAGTGCAACCAGAAGCG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCCATCAATGTCCAGCTaGATGTTGGCTGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGPSMSS*MLAGRP
Trigger: CGGCCTCCCAGCCAACATCCAGCTGGACATTGATGG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCAAGCTCTTGTCTCCGATaGGGTGCTCCTGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPSSCLR*GAPGFH
Trigger: ATGGAAGCCAGGAGCACCCCATCGGAGACAAGAGCT...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGCGACTAGACGGGCCGTaGCTCCCTGAGGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTRLDGP*LPEAGC
Trigger: ACAGCCAGCCTCAGGGAGCCACGGCCCGTCTAGTCG...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGAACAGCAAAACGATGTaGGCTTCAACTGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSNSKTM*ASTVGS
Trigger: GGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTT...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCAGGCTGCCGAGGGTCTaGACGGTCTTGGAGATCAAT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGRLPRV*TVLEIN
Trigger: ATTGATCTCCAAGACCGTTCAGACCCTCGGCAGCCT...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAACATGTTTTTCATTTTaGAAGACTCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVHETDAHTAGGACHSRLTCFSF*KTPPPA
Trigger: AGCTGGAGGAGGAGTCTTTCAAAATGAAAAACATGT...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCACGCAAGACAGACGTaGACGAGACTGACGCACACA +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGHARQT*TRLTHT
Trigger: TGTGTGCGTCAGTCTCGTGCACGTCTGTCTTGCGTG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACAGGTGTCCCTGTTGTaGTACTTCTGCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPQVSLL*YFCKSS
Trigger: GGAGGACTTGCAGAAGTACCACAACAGGGACACCTG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGAACACTTCATCGAACTaGGGATTGTTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLNTSSN*GLLVFL
Trigger: GAGGAAGACCAACAATCCCCAGTTCGATGAAGTGTT...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCAAACTTCAGGTTACTaGCATTCCAGAGGTCAACTC +
Preference number: 4 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFQTSGY*HSRGQL
Trigger: GAGTTGACCTCTGGAATGCCAGTAACCTGAAGTTTG...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGATGGTGTTGGGGTCCTaGGTCCGCTTCACCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTMVLGS*VRFTSA
Trigger: CGCGGAGGTGAAGCGGACCCAGGACCCCAACACCAT...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCACCGATGGGGTGCTCCTaGCTTCCATATTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPPMGCS*LPYFVF
Trigger: GAAGACGAAATATGGAAGCCAGGAGCACCCCATCGG...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTTTTAAATGGAATGAGTaGAGGTCTCGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLFKWNE*RSRTAA
Trigger: GGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAA...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCGTGCTCATGTACAAGTTaGAGAGGGAGTAGATACGCT +
Preference number: 4 (lower is better)
Translates to: LHLPAIKLTPQPGIKRTSCSCTS*RGSRYA
Trigger: AGCGTATCTACTCCCTCTTCAACTTGTACATGAGCA...CGAGGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGGTCCAGGTTCACCGTaGAGTAGCAATCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGGPGSP*SSNPSS
Trigger: AGATGAGGGATTGCTACTGCACGGTGAACCTGGACC...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGTACAAGGATACGTCGTaGTGTGTATTTAAACGGCGC +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKYKDTS*CVFKRR
Trigger: GCGCCGTTTAAATACACAGCACGACGTATCCTTGTA...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGCGAACTGGGGATTGTTaGTCTTCCTCTTCACTTTCG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLRTGDC*SSSSLS
Trigger: CGAAAGTGAAGAGGAAGACCAACAATCCCCAGTTCG...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGATGGCACTGATGAATaGCACCACCCTGCCATAGTG +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGDGTDE*HHPAIV
Trigger: CACTATGGCAGGGTGGTGCCATTCATCAGTGCCATC...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGAGAAGATGTCACACATaGCGGTCGGGCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTRRCHT*RSGSSP
Trigger: GGGTGAGCTGCCCGACCGTCATGTGTGACATCTTCT...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCACTGGCTCACTTTGGTaGGAATGTCGATCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGTGSLW*ECRSSP
Trigger: AGGACTGGATCGACATTCTCACCAAAGTGAGCCAGT...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCCAGGATGTTCTCGATaGGAATGCTGTAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGPGCSR*ECCREA
Trigger: AGCCTCTCTACAGCATTCCCATCGAGAACATCCTGG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGCTCCAAGGGACTCTGTaGACAGAACCCGTATCCCCC +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTLQGTL*TEPVSP
Trigger: GGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAG...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGCACTTGGACGCCAGTaGGTTTCCTCGGAAGATGGT +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSALGRQ*VSSEDG
Trigger: ACCATCTTCCGAGGAAACTCACTGGCGTCCAAGTGC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp AGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTAGTGGGTATAGGTTTTaGCGTTCTGAGTTACTTTGT +
Preference number: 4 (lower is better)
Translates to: RDVCTPKPLYLKLRVSSLSGYRF*RSELLC
Trigger: ACAAAGTAACTCAGAACGTCAAAACCTATACCCACT...AAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGCTCCAGCTTCTCCACTaGCAGGATGTTCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTLQLLH*QDVLDG
Trigger: CCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAG...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGTCGAATACTCCTCCTaGTCCGGGCCGTCATACACA +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSVEYSS*SGPSYT
Trigger: TGTGTATGACGGCCCGGAGCAGGAGGAGTATTCGAC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCTCAGAAGAAAACACGTaGTCTTCCGTGTATACCACG +
Preference number: 4 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTSEENT*SSVYTT
Trigger: CGTGGTATACACGGAAGACCACGTGTTTTCTTCTGA...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGACTCAGTGATGGCGTaGAAGACGCGGTCCACATAC +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSDSVMA*KTRSTY
Trigger: GTATGTGGACCGCGTCTTCCACGCCATCACTGAGTC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGGTACAGCGCACGCTCTaGCTGGATGACCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSVQRTL*LDDLEH
Trigger: ATGTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTAC...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGACGCAGTTGTTGGCCTaGATGTACAGCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSTQLLA*MYSARS
Trigger: AGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGT...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GCACAGCCCACACTTCCTGATCCTTCAGCTGATCCCCAGATCCCCACAAACAAGCATATTTCGTCTTCTTaGACTTGTCCCTCTTATACT +
Preference number: 4 (lower is better)
Translates to: AQPTLPDPSADPQIPTNKHISSS*TCPSYT
Trigger: AGTATAAGAGGGACAAGTTCAAGAAGACGAAATATG...CTTGTTTGTGGGGATCTGGGGATCAGCTGAAGGATCAGGAAGTGTGGGCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGCCTCCAGTATTTTTGTaGCAAGAAAGTTCCTATCTG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLPPVFL*QESSYL
Trigger: CAGATAGGAACTTTCTTGTCACAAAAATACTGGAGG...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR GCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCATGGTCTCGTCGATaGACTTGGACGCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTSWSRR*TWTPVS
Trigger: ACTCACTGGCGTCCAAGTGCATCGACGAGACCATGA...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGTCTGGCTGGATGACCTaGAACATGTTTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLSGWMT*NMFFIL
Trigger: CAAAATGAAAAACATGTTCCAGGTCATCCAGCCAGA...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR TCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGAAGCACAGAATCAAATaGCGACACGTTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSKHRIK*RHVPQG
Trigger: GCCCTGTGGAACGTGTCGTCATTTGATTCTGTGCTT...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTTGTCCCTCTTATACTaGGCGTGCTCCTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTLSLLY*ACSCSK
Trigger: TTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAA...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CCA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTTTAAATGGAATGAGTaGAGGTCTCGGACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSFKWNE*RSRTAA
Trigger: GGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAA...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp TCTTCACGCTCTGGAAGACCCGGAGCCCCTCGTCCTCCACCGCCATaGTGCGCGTCCGCGCCCGCCGAGCCTCGCCCCAAGCGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: SSRSGRPGAPRPPPP*CASAPAEPRPKRAP
Trigger: CGGCGCGCGCTTGGGGCGAGGCTCGGCGGGCGCGGACGCGCAGCATGGCGGTGGAGGACGAGGGGCTCCGGGTCTTCCAGAGCGTGAAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCTTTGCATGGGCAGCTaGCTGGCGCCACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCLCMGS*LAPLGA
Trigger: CGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp CCCCAGGCGCCCAGATCACCGCGGATGCCTCGCTGTCACAGGCGGTaGCCTCGCTGGCATCTGACGCTGGCATCTCCCCCACTGGCATCT +
Preference number: 5 (lower is better)
Translates to: PQAPRSPRMPRCHRR*PRWHLTLASPPLAS
Trigger: AGATGCCAGTGGGGGAGATGCCAGCGTCAGATGCCAGCGAGGGCACCGCCTGTGACAGCGAGGCATCCGCGGTGATCTGGGCGCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCCTCGGAAGATGGTGTaGGGGTCCTGGGTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCPRKMV*GSWVRF
Trigger: GAAGCGGACCCAGGACCCCAACACCATCTTCCGAGG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp GGGACGGCCGCCTCCTGCTTCTCCCGGCAAACCTCGCCCAGGATGTaGGCCGCAGACGCTGACACGGGCTCCACATCCGCAGACTTCAAC +
Preference number: 5 (lower is better)
Translates to: GTAASCFSRQTSPRM*AADADTGSTSADFN
Trigger: GTTGAAGTCTGCGGATGTGGAGCCCGTGTCAGCGTCTGCGGCCCACATCCTGGGCGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCTCGCAGATTTGGACTaGGACAGGCTGCCGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCLADLD*DRLPRV
Trigger: GACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGAG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCAGCTCCAGGTGCACTTaGCCCTGCACTTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCSSRCT*PCTSES
Trigger: TGACTCGGAAGTGCAGGGCAAAGTGCACCTGGAGCT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGAAACCCCAGCGCCACTaGTCTATGGGCCGGGACGGC +
Preference number: 5 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSKPQRH*SMGRDG
Trigger: GCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCGTCTCGTCGATGCACTaGGACGCCAGTGAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCVSSMH*DASEFP
Trigger: AGGAAACTCACTGGCGTCCAAGTGCATCGACGAGAC...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGGTGAGCTGGAAGAGGTaGGGGGAGAGAATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GHRATEPSVTRTVHARQTVSWKR*GERMAG
Trigger: GCCCGCCATTCTCTCCCCCAACCTCTTCCAGCTCAC...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGATGTCCAGCTGGATGTaGGCTGGGAGGCCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSMSSWM*AGRPPV
Trigger: CACTGGCGGCCTCCCAGCCAACATCCAGCTGGACAT...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp GCTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTaGATGGGCAGCTTGCTGGCGCCACTGGGCGCGTCCCGCAGACTT +
Preference number: 5 (lower is better)
Translates to: ALRSSFSSPSQRLRL*MGSLLAPLGASRRL
Trigger: AAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCATGCGTGTGGCGAGCTaGTGGCAGACGACCCCAGTG +
Preference number: 5 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTMRVAS*WQTTPV
Trigger: CACTGGGGTCGTCTGCCACAAGCTCGCCACACGCAT...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCGGCTGCTCAACACTCTaGGGGTCTCTTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGGCSTL*GSLLPE
Trigger: CTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGCC...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp CCACGTTCAGCCGCAGGGAGCCCAGGTCGTCTGGCTTTAGGCTCTTaGTACCATTGTCCCGGGGCTGGAGGAAGTACCACGCCTCGTAGG +
Preference number: 5 (lower is better)
Translates to: PRSAAGSPGRLALGS*YHCPGAGGSTTPRR
Trigger: CCTACGAGGCGTGGTACTTCCTCCAGCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAGACGACCTGGGCTCCCTGCGGCTGAACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCTTGGCTTCACCGATCTaGATCTTCACGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCLASPI*IFTLWK
Trigger: CTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCAA...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACTCTGATTTCGAGCTaGTCCACGTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCTLISS*STSSSS
Trigger: TGAGGAGGAAGACGTGGACAAGCTCGAAATCAGAGT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCCGTCCTTGGGCCCTCTaGATCATGAACCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCRPWAL*IMNPSL
Trigger: TAAAGAAGGGTTCATGATCAAGAGGGCCCAAGGACG...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp AAGACAGACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCTTTGCATGGGCAGCTaGCTGGCGCCACTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: KTDVHETDAHTAGGACHSLCMGS*LAPLGA
Trigger: CGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAG...ACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTCTGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGAAACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GNPSATCLWAGTACISLCGVHLT*PALRSS
Trigger: GGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCC...GCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp CCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTaGGCGCGTCCCGCAGACTTTAAATGGAATGAGTGGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: PPKGCGFAWAACWRH*ARPADFKWNEWRSR
Trigger: CCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGATTGGCCTCCACGCAGTaGTTGGCCTGGATGTACAGC +
Preference number: 5 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGLASTQ*LAWMYS
Trigger: GCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAA...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGAGTGAGGCGCTTCTGGTaGCACTGGCTCACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGVRRFW*HWLTLV
Trigger: CACCAAAGTGAGCCAGTGCAACCAGAAGCGCCTCAC...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CGAAAGTGGAACAGGGAGGCCGCCTCCCATGGCTGCCTGGATGGCAGGCACAGTCCATTCCTGTTCCATTaGCCTTCCCGGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RKWNREAASHGCLDGRHSPFLFH*PSRQPS
Trigger: GGAAGGCTGCCGGGAAGGCAAATGGAACAGGAATGG...ACTGTGCCTGCCATCCAGGCAGCCATGGGAGGCGGCCTCCCTGTTCCACTTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATaGGCAGCTTGCTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAA +
Preference number: 5 (lower is better)
Translates to: CALPSLLPPKGCGFA*AACWRHWARPADFK
Trigger: TTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAGGCGTAGGGGTCACATaGCCCATTCACGATGGGGAG +
Preference number: 5 (lower is better)
Translates to: DVHETDAHTAGGACHSRLGVGVT*PIHDGE
Trigger: CTCCCCATCGTGAATGGGCAATGTGACCCCTACGCC...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCGTGAGCTGGAAGAGGTaGGGGGAGAGAATGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GGPAAGLPETGSIPVPFAVSWKR*GERMAG
Trigger: GCCCGCCATTCTCTCCCCCAACCTCTTCCAGCTCAC...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTGATGTCGATCCAGTCCTaGGCCTCCACGCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AQSHRAQRHTHRARKTDVMSIQS*ASTQLL
Trigger: CAACAACTGCGTGGAGGCCAAGGACTGGATCGACAT...CACGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGTGGGCTCCGCAGACGCCTGGAGAAGCTGGAGCCCACACCTTTCCCTCCAAGATGTCGATCCAGTCCTaGGCCTCCACGCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LWAPQTPGEAGAHTFPSKMSIQS*ASTQLL
Trigger: CAACAACTGCGTGGAGGCCAAGGACTGGATCGACAT...CTTGGAGGGAAAGGTGTGGGCTCCAGCTTCTCCAGGCGTCTGCGGAGCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp GAGAATGGCGGGCGCAAAGAACCTCAGGAAGATGAAGCTGCTCACTaGAGTGTACCTGACGTCCGGGTCATCCTGGAAGCGCTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: ENGGRKEPQEDEAAH*SVPDVRVILEALGR
Trigger: GCGGCCAAGCGCTTCCAGGATGACCCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCTTTGCGCCCGCCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp CCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTaGTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAATGGAATGAG +
Preference number: 5 (lower is better)
Translates to: PSLLPPKGCGFAWAA*WRHWARPADFKWNE
Trigger: CTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TGGGCAGCTTGCTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAATaGAATGAGTGGAGGTCTCGGACTGCTGCCGGATGTAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: WAACWRHWARPADFK*NEWRSRTAAGCSSG
Trigger: TCCAGAACTACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGTCATCGAACTGGGGATaGTTGGTCTTCCTCTTCACT +
Preference number: 5 (lower is better)
Translates to: LPPKGCGFAWAACWRHWASSNWG*LVFLFT
Trigger: AGTGAAGAGGAAGACCAACAATCCCCAGTTCGATGA...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTCCTCGGAAGATGGTGTaGGGGTCCTGGGTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPPRKMV*GSWVRF
Trigger: GAAGCGGACCCAGGACCCCAACACCATCTTCCGAGG...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTCGATTTCACAGGGTTaGTGGCTCTGGCATATCTCC +
Preference number: 5 (lower is better)
Translates to: GHRATEPSVTRTVHARQTSISQG*WLWHIS
Trigger: GGAGATATGCCAGAGCCACAAACCCTGTGAAATCGA...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp ACCCCAGCGCCACTTGTCTATGGGCCGGGACGGCGTGCATCTCACTTTGCCGGCTTAAAACTCGCAGATTaGGACTTGGACAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TPAPLVYGPGRRASHFAGLKLAD*DLDRLP
Trigger: CGGCAGCCTGTCCAAGTCCAAATCTGCGAGTTTTAA...GCCGGCAAAGTGAGATGCACGCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCACGCAAGACAGACGTTGCACTGGCTCACTTaGGTGAGAATGTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: GHRATEPSVTRTVHARQTLHWLT*VRMSIQ
Trigger: CTGGATCGACATTCTCACCAAAGTGAGCCAGTGCAA...CGTCTGTCTTGCGTGCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGGCGTGCATCTCACTTaGCCGGCTCTGCGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLGVHLT*PALRSS
Trigger: GGAAGAGCGCAGAGCCGGCAAAGTGAGATGCACGCC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTACCATTCCTGTTCCATTaGCCTTCCCGGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: DVHETDAHTAGGACHSRLPFLFH*PSRQPS
Trigger: GGAAGGCTGCCGGGAAGGCAAATGGAACAGGAATGG...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp TCCAGGTGCACTTTGCCCTGCACTTCCGAGTCAGCGTCCACGTGCTaGAGCTGGAACCAGGTGTCCCTGTTGTGGTACTTCTGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SRCTLPCTSESASTC*SWNQVSLLWYFCKS
Trigger: GGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGCAGGGCAAAGTGCACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TCGCAGATTTGGACTTGGACAGGCTGCCGAGGGTCTGAACGGTCTTaGAGATCAATGTCAGCGTCCTGGACGTCTGGGGGTCCGTGTGGT +
Preference number: 5 (lower is better)
Translates to: SQIWTWTGCRGSERS*RSMSASWTSGGPCG
Trigger: ACCACACGGACCCCCAGACGTCCAGGACGCTGACATTGATCTCCAAGACCGTTCAGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTCTCGCAGATTTGGACTaGGACAGGCTGCCGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPLADLD*DRLPRV
Trigger: GACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGAG...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGGCTGCTCAACACTCTaGGGGTCTCTTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLGCSTL*GSLLPE
Trigger: CTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGCC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCAGCAGGCCTCCCGGGCACAGAGCCACAGAGCCCAGCGTCACACGCACCGTGCAACATGTTTTTCATTTaGAAAGACTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAGLPGTEPQSPASHAPCNMFFI*KDSSSS
Trigger: GCTGGAGGAGGAGTCTTTCAAAATGAAAAACATGTT...GCACGGTGCGTGTGACGCTGGGCTCTGTGGCTCTGTGCCCGGGAGGCCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCGCCTCCACGCAGTTGTaGGCCTGGATGTACAGCGCA +
Preference number: 5 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFASTQL*AWMYSA
Trigger: TGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGC...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGAAACCCCAGCGCCACTaGTCTATGGGCCGGGACGGC +
Preference number: 5 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLKPQRH*SMGRDG
Trigger: GCCGTCCCGGCCCATAGACAAGTGGCGCTGGGGTTT...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 90 bp AGGGTTTGTGGCTCTGGCATATCTCCTCGATGGCGGGCTTCAGGGTaGCATGCAGGTAATGCATCCCCGCCAGCTTCATGGTCTCGTCGA +
Preference number: 5 (lower is better)
Translates to: RVCGSGISPRWRASG*HAGNASPPASWSRR
Trigger: TCGACGAGACCATGAAGCTGGCGGGGATGCATTACCTGCATGTCACCCTGAAGCCCGCCATCGAGGAGATATGCCAGAGCCACAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp CCTCCTCCTGGTCCAGGTTCACCGTGCAGTAGCAATCCCTCATCTTaGTCGGCCCCGGGTAAGAGGGAAGGTTTTTGGCTTCACCGATCT +
Preference number: 5 (lower is better)
Translates to: PPPGPGSPCSSNPSS*SAPGKREGFWLHRS
Trigger: AGATCGGTGAAGCCAAAAACCTTCCCTCTTACCCGGGGCCGAGCAAGATGAGGGATTGCTACTGCACGGTGAACCTGGACCAGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp GAGTCAGCGTCCACGTGCTGCAGCTGGAACCAGGTGTCCCTGTTGTaGTACTTCTGCAAGTCCTCCTTCTGGATGGCCACCTTCCCTATG +
Preference number: 5 (lower is better)
Translates to: ESASTCCSWNQVSLL*YFCKSSFWMATFPM
Trigger: CATAGGGAAGGTGGCCATCCAGAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TGCACTTTGCCCTGCACTTCCGAGTCAGCGTCCACGTGCTGCAGCTaGAACCAGGTGTCCCTGTTGTGGTACTTCTGCAAGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CTLPCTSESASTCCS*NQVSLLWYFCKSSF
Trigger: GAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGCAGGGCAAAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TGCTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAATGGAATGAGTaGAGGTCTCGGACTGCTGCCGGATGTAGTTCTGGAAGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: CWRHWARPADFKWNE*RSRTAAGCSSGSSC
Trigger: ACAAGAGCTTCCAGAACTACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGAGCTCCAGGTGCACTTaGCCCTGCACTTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLSSRCT*PCTSES
Trigger: TGACTCGGAAGTGCAGGGCAAAGTGCACCTGGAGCT...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCTCTGGCTTTAGGCTCTaGCTACCATTGTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LEGRLHPEAPVPQTQSFFSGFRL*LPLSRG
Trigger: GCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAGA...GAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTTTGGCCTCCACGCAGTaGTTGGCCTGGATGTACAGC +
Preference number: 5 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPLASTQ*LAWMYS
Trigger: GCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAA...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTGGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGGTGAGGCGCTTCTGGTaGCACTGGCTCACTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LEDLQLAFLRQAPFLFHLVRRFW*HWLTLV
Trigger: CACCAAAGTGAGCCAGTGCAACCAGAAGCGCCTCAC...CAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CACACACCTGCCGTCTGCATCCCGGGAGGACGCCCTTTGGGAAAGGCCTCCTCGTGCATCTTCTCCAGCTaGCTCATGTACAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: HTPAVCIPGGRPLGKASSCIFSS*LMYKLK
Trigger: CTTCAACTTGTACATGAGCAAGCTGGAGAAGATGCA...CGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGGGATGCAGACGGCAGGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCCGGGAGGACGCCCTTaGGGAAAGGCCTCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGPGGRP*GKASSA
Trigger: TGCCGAGGAGGCCTTTCCCAAAGGGCGTCCTCCCGG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp TCACACATGACGGTCGGGCAGCTCACCCCAGACTCAGTGATGGCGTaGAAGACGCGGTCCACATACTGCCGTAGGTTCTCCATGTTGTTT +
Preference number: 5 (lower is better)
Translates to: SHMTVGQLTPDSVMA*KTRSTYCRRFSMLF
Trigger: AAACAACATGGAGAACCTACGGCAGTATGTGGACCGCGTCTTCCACGCCATCACTGAGTCTGGGGTGAGCTGCCCGACCGTCATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 90 bp GCAGGAGGCTGGAATTTCCAGCCCAGTGAGATTTCACGGTGCAACTaGAAGGCTCCAAGGGGGAAACACGTAGGTGTCTCTTGGGCGGAT +
Preference number: 5 (lower is better)
Translates to: AGGWNFQPSEISRCN*KAPRGKHVGVSWAD
Trigger: ATCCGCCCAAGAGACACCTACGTGTTTCCCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS-3UTR CAA 90 bp GCAATACTGACCATGGGCCCTGGAGGGACGTCTGCACCCCGAAGCCCCTGTACCGACTTTTCCACAATTTaGGTCCTGAAAACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AILTMGPGGTSAPRSPCTDFSTI*VLKTSS
Trigger: GGAGGAGGTTTTCAGGACCAAAATTGTGGAAAAGTC...GGTACAGGGGCTTCGGGGTGCAGACGTCCCTCCAGGGCCCATGGTCAGTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAACTCTGATTTCGAGCTaGTCCACGTCTTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: DVHETDAHTAGGACHSRLTLISS*STSSSS
Trigger: TGAGGAGGAAGACGTGGACAAGCTCGAAATCAGAGT...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GCCCTTTGGGAAAGGCCTCCTCGGCAGTGTGAGGTCTGGAGGGGTCTGCCTGGACGTAGGTTCTCCATGTaGTTTTCAAGGTTTTCTCCG +
Preference number: 5 (lower is better)
Translates to: ALWERPPRQCEVWRGLPGRRFSM*FSRFSP
Trigger: CGGAGAAAACCTTGAAAACAACATGGAGAACCTACG...TCCAGGCAGACCCCTCCAGACCTCACACTGCCGAGGAGGCCTTTCCCAAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGGCCTCCACGCAGTTGTaGGCCTGGATGTACAGCGCA +
Preference number: 5 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLASTQL*AWMYSA
Trigger: TGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGC...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTGGGCGCCATATTTCGTCTTCTaGAACTTGTCCCTCTTATAC +
Preference number: 5 (lower is better)
Translates to: LPPKGCGFAWAACWRHWAPYFVF*NLSLLY
Trigger: GTATAAGAGGGACAAGTTCAAGAAGACGAAATATGG...CGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp TCCACGTGCTGCAGCTGGAACCAGGTGTCCCTGTTGTGGTACTTCTaGAAGTCCTCCTTCTGGATGGCCACCTTCCCTATGATGGAATCC +
Preference number: 5 (lower is better)
Translates to: STCCSWNQVSLLWYF*KSSFWMATFPMMES
Trigger: GGATTCCATCATAGGGAAGGTGGCCATCCAGAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp GCTGTAGCAGGAGGCTGGAATTTCCAGCCCAGTGAGATTTCACGGTaGAACTGGAAGGCTCCAAGGGGGAAACACGTAGGTGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: AVAGGWNFQPSEISR*NWKAPRGKHVGVSW
Trigger: CCAAGAGACACCTACGTGTTTCCCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGCTACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 90 bp GTGAGAATGTCGATCCAGTCCTTGGCCTCCACGCAGTTGTTGGCCTaGATGTACAGCGCACGCTCTGGCTGGATGACCTGGAACATGTTT +
Preference number: 5 (lower is better)
Translates to: VRMSIQSLASTQLLA*MYSARSGWMTWNMF
Trigger: AAACATGTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTAACCAGGTGTCCCTGTaGTGGTACTTCTGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPNQVSL*WYFCKS
Trigger: GGACTTGCAGAAGTACCACAACAGGGACACCTGGTT...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCATGCGTGTGGCGAGCTaGTGGCAGACGACCCCAGTG +
Preference number: 5 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGMRVAS*WQTTPV
Trigger: CACTGGGGTCGTCTGCCACAAGCTCGCCACACGCAT...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CTCTGCGCTCTTCCTTCTCTTCTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCATTAAAACTCGCAGATTaGGACTTGGACAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LCALPSLLPPKGCGFAWALKLAD*DLDRLP
Trigger: CGGCAGCCTGTCCAAGTCCAAATCTGCGAGTTTTAA...TGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAGAAGAGAAGGAAGAGCGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCCGTCCTTGGGCCCTCTaGATCATGAACCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GGPAAGLPETGSIPVPFARPWAL*IMNPSL
Trigger: TAAAGAAGGGTTCATGATCAAGAGGGCCCAAGGACG...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCCCAAAGGCTGCGGCTTaGCATGGGCAGCTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGPKAAA*HGQLAG
Trigger: GCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGG...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GGAGGACCTGCAGCTGGCCTTCCTGAGACAGGCTCCATTCCTGTTCCATTTGCCTCATCGAACTGGGGATaGTTGGTCTTCCTCTTCACT +
Preference number: 5 (lower is better)
Translates to: GGPAAGLPETGSIPVPFASSNWG*LVFLFT
Trigger: AGTGAAGAGGAAGACCAACAATCCCCAGTTCGATGA...GGCAAATGGAACAGGAATGGAGCCTGTCTCAGGAAGGCCAGCTGCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCTTTCCCTCCAAGGGACTCTGTGGACAGAACCCGTATCCCCCAAGCACCAAGGTTCGTCTTCTTGAACTaGTCCCTCTTATACTGGGCG +
Preference number: 5 (lower is better)
Translates to: PFPPRDSVDRTRIPQAPRFVFLN*SLLYWA
Trigger: CGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAA...CCTTGGTGCTTGGGGGATACGGGTTCTGTCCACAGAGTCCCTTGGAGGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 90 bp TCCCACAGGCCTCCTGCATCTTCTCCAGCTTGCTCATGTACAAGTTaGAGAGGGAGTAGATACGCTCCGTCTCACGGTCCCCATCAATGT +
Preference number: 5 (lower is better)
Translates to: SHRPPASSPACSCTS*RGSRYAPSHGPHQC
Trigger: ACATTGATGGGGACCGTGAGACGGAGCGTATCTACTCCCTCTTCAACTTGTACATGAGCAAGCTGGAGAAGATGCAGGAGGCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 90 bp AAAATTCCCAGAGGCTGTAGCAGGAGGCTGGAATTTCCAGCCCAGTaGGATTTCACGGTGCAACTGGAAGGCTCCAAGGGGGAAACACGT +
Preference number: 5 (lower is better)
Translates to: KIPRGCSRRLEFPAQ*DFTVQLEGSKGETR
Trigger: ACGTGTTTCCCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGCTACAGCCTCTGGGAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 90 bp TCCTGGCTTCCATATTTCGTCTTCTTGAACTTGTCCCTCTTATACTaGGCGTGCTCCTGCTCCAAAGCCCCAACCCCAGCGATGACTTGC +
Preference number: 5 (lower is better)
Translates to: SWLPYFVFLNLSLLY*ACSCSKAPTPAMTC
Trigger: GCAAGTCATCGCTGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCTCTGGCTTTAGGCTCTaGCTACCATTGTCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: QEPGEVGTRIRRAVYLNGSGFRL*LPLSRG
Trigger: GCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAGA...GCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCCGGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 90 bp AGCCTCGGCCGTCTCCTCTTACAACCCTGGAGAGATGTGAAAGCTTaGCGACGGACGGTGACTTTGTTTGCTCCGAAAATCCTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: SLGRLLLQPWRDVKA*RRTVTLFAPKILPR
Trigger: TCTTGGAAGGATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCTCTCCAGGGTTGTAAGAGGAGACGGCCGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 90 bp GTCTGCTGCACAAACACAAAATTCCCAGAGGCTGTAGCAGGAGGCTaGAATTTCCAGCCCAGTGAGATTTCACGGTGCAACTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VCCTNTKFPEAVAGG*NFQPSEISRCNWKA
Trigger: AGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGCTACAGCCTCTGGGAATTTTGTGTTTGTGCAGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS-3UTR CAA 90 bp ATTCTGCACCTCCCAGCCATAAAACTGACCCCTCAGCCAGGAATCAAACGAACCAAAGCGCTTCCGTCCTaGGGCCCTCTTGATCATGAA +
Preference number: 5 (lower is better)
Translates to: ILHLPAIKLTPQPGIKRTKALPS*GPLDHE
Trigger: TTCATGATCAAGAGGGCCCAAGGACGGAAGCGCTTT...GGTTCGTTTGATTCCTGGCTGAGGGGTCAGTTTTATGGCTGGGAGGTGCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GACGTGCACGAGACTGACGCACACACGGCCGGAGGTGCATGTCACAGTCGACTAAACATGTTTTTCATTTaGAAAGACTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DVHETDAHTAGGACHSRLNMFFI*KDSSSS
Trigger: GCTGGAGGAGGAGTCTTTCAAAATGAAAAACATGTT...TAGTCGACTGTGACATGCACCTCCGGCCGTGTGTGCGTCAGTCTCGTGCACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CGTCTGCACCCCGAAGCCCCTGTACCTCAAACTCAGAGTTTCTTCCCTTCTTTGTTGCACTGGCTCACTTaGGTGAGAATGTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: RLHPEAPVPQTQSFFPSLLHWLT*VRMSIQ
Trigger: CTGGATCGACATTCTCACCAAAGTGAGCCAGTGCAA...CAAAGAAGGGAAGAAACTCTGAGTTTGAGGTACAGGGGCTTCGGGGTGCAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGATGTCCAGCTGGATGTaGGCTGGGAGGCCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSMSSWM*AGRPPV
Trigger: CACTGGCGGCCTCCCAGCCAACATCCAGCTGGACAT...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCCCATTCAACAGCAAAACGATGTGGGCTTCAACTGTGGGCTCCGCAGACGCCTTGCATCTTCTCCAGCTaGCTCATGTACAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PHSTAKRCGLQLWAPQTPCIFSS*LMYKLK
Trigger: CTTCAACTTGTACATGAGCAAGCTGGAGAAGATGCA...AGGCGTCTGCGGAGCCCACAGTTGAAGCCCACATCGTTTTGCTGTTGAATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGCCAAAGGCTGCGGCTTaGCATGGGCAGCTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSPKAAA*HGQLAG
Trigger: GCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGG...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp TATTTCGTCTTCTTGAACTTGTCCCTCTTATACTGGGCGTGCTCCTaGTCCAAAGCCCCAACCCCAGCGATGACTTGCTTTAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: YFVFLNLSLLYWACS*SKAPTPAMTCFSVL
Trigger: CAAGACGCTAAAGCAAGTCATCGCTGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp CTTCCATATTTCGTCTTCTTGAACTTGTCCCTCTTATACTGGGCGTaGTCCTGCTCCAAAGCCCCAACCCCAGCGATGACTTGCTTTAGC +
Preference number: 5 (lower is better)
Translates to: LPYFVFLNLSLLYWA*SCSKAPTPAMTCFS
Trigger: GCTAAAGCAAGTCATCGCTGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp GACGGTGACTTTGTTTGCTCCGAAAATCCTTCCAAGAGGACTGTCTaGTGCACAAACACAAAATTCCCAGAGGCTGTAGCAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DGDFVCSENPSKRTV*CTNTKFPEAVAGGW
Trigger: CCAGCCTCCTGCTACAGCCTCTGGGAATTTTGTGTTTGTGCAGCAGACAGTCCTCTTGGAAGGATTTTCGGAGCAAACAAAGTCACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS-3UTR CAA 90 bp GGGAGAAGTCGGTACAAGGATACGTCGTGCTGTGTATTTAAACGGCGCTTCCCATCGATTTCACAGGGTTaGTGGCTCTGGCATATCTCC +
Preference number: 5 (lower is better)
Translates to: GRSRYKDTSCCVFKRRFPSISQG*WLWHIS
Trigger: GGAGATATGCCAGAGCCACAAACCCTGTGAAATCGA...TGGGAAGCGCCGTTTAAATACACAGCACGACGTATCCTTGTACCGACTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp GAACATGTTTTTCATTTTGAAAGACTCCTCCTCCAGCTTCTCCACTaGCAGGATGTTCTCGATGGGAATGCTGTAGAGAGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: EHVFHFERLLLQLLH*QDVLDGNAVERLVP
Trigger: GGGGACCAGCCTCTCTACAGCATTCCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAGGAGGAGTCTTTCAAAATGAAAAACATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 90 bp ACCCTGGAGAGATGTGAAAGCTTGACGACGGACGGTGACTTTGTTTaGTCCGAAAATCCTTCCAAGAGGACTGTCTGCTGCACAAACACA +
Preference number: 5 (lower is better)
Translates to: TLERCESLTTDGDFV*SENPSKRTVCCTNT
Trigger: TGTGTTTGTGCAGCAGACAGTCCTCTTGGAAGGATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCTCTCCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS GCA 90 bp CGAGCTTGTCCACGTCTTCCTCCTCAAAGTCAAAGTGGGACTTCTTaGTGTAGCTACAGGGCCGGGTCACCTCAAAATAAAACACTTCAT +
Preference number: 5 (lower is better)
Translates to: RACPRLPPQSQSGTS*CSYRAGSPQNKTLH
Trigger: ATGAAGTGTTTTATTTTGAGGTGACCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTGACTTTGAGGAGGAAGACGTGGACAAGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334062.8
ENST00000542651.2
ENST00000628197.1
ENST00000630618.2
CDS GCA 90 bp GGTGACTTTGTTTGCTCCGAAAATCCTTCCAAGAGGACTGTCTGCTaGACAAACACAAAATTCCCAGAGGCTGTAGCAGGAGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GDFVCSENPSKRTVC*TNTKFPEAVAGGWN
Trigger: ATTCCAGCCTCCTGCTACAGCCTCTGGGAATTTTGTGTTTGTGCAGCAGACAGTCCTCTTGGAAGGATTTTCGGAGCAAACAAAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS-3UTR CAA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGGTCTCGTCGATGCACTaGGACGCCAGTGAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTVSSMH*DASEFP
Trigger: AGGAAACTCACTGGCGTCCAAGTGCATCGACGAGAC...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTTGGCTTCACCGATCTaGATCTTCACGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSLASPI*IFTLWK
Trigger: CTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCAA...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGTTCGTCTTCTTGAACTaGTCCCTCTTATACTGGGCG +
Preference number: 5 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSFVFLN*SLLYWA
Trigger: CGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAA...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGGACTTTTCCACAATTTaGGTCCTGAAAACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTDFSTI*VLKTSS
Trigger: GGAGGAGGTTTTCAGGACCAAAATTGTGGAAAAGTC...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp CCTGAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGCGTAGGTTCTCCATGTaGTTTTCAAGGTTTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PELQYFQTRTGRSRYKDTRRFSM*FSRFSP
Trigger: CGGAGAAAACCTTGAAAACAACATGGAGAACCTACG...CGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS-3UTR CAA 90 bp GAACTACAGTATTTTCAAACAAGAACCGGGAGAAGTCGGTACAAGGATACGTCGCCATATTTCGTCTTCTaGAACTTGTCCCTCTTATAC +
Preference number: 5 (lower is better)
Translates to: ELQYFQTRTGRSRYKDTSPYFVF*NLSLLY
Trigger: GTATAAGAGGGACAAGTTCAAGAAGACGAAATATGG...CGACGTATCCTTGTACCGACTTCTCCCGGTTCTTGTTTGAAAATACTGTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp GCCAGTGCAGGGCGAGCAGCCCGGAGCCGAGTCGGATaGCGCCCTACAGCACAGCCAGTGGCCGCTCAGGTA +
Preference number: 6 (lower is better)
Translates to: ASAGRAARSRVG*RPTAQPVAAQV
Trigger: TACCTGAGCGGCCACTGGCTGTGCTGTAGGGCGCCATCCGACTCGGCTCCGGGCTGCTCGCCCTGCACTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp TGTAGGAAGAGCCGCACCAGCGGGACGGCCGCCTCCTaGTTCTCCCGGCAAACCTCGCCCAGGATGTGGGCC +
Preference number: 6 (lower is better)
Translates to: CRKSRTSGTAAS*FSRQTSPRMWA
Trigger: GGCCCACATCCTGGGCGAGGTTTGCCGGGAGAAGCAGGAGGCGGCCGTCCCGCTGGTGCGGCTCTTCCTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp AGCTCAGTGACCCCCAGGCGCCCAGATCACCGCGGATaGCTCGCTGTCACAGGCGGTGCCCTCGCTGGCATC +
Preference number: 6 (lower is better)
Translates to: SSVTPRRPDHRG*LAVTGGALAGI
Trigger: GATGCCAGCGAGGGCACCGCCTGTGACAGCGAGGCATCCGCGGTGATCTGGGCGCCTGGGGGTCACTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS TCA 72 bp TCCAGGTGCACTTTGCCCGGTTGCCGTGTCCCCCACTaGGCGGGCAGCGGCCCAGAGAGCAGCCAGGACAGA +
Preference number: 6 (lower is better)
Translates to: SRCTLPGCRVPH*AGSGPESSQDR
Trigger: TCTGTCCTGGCTGCTCTCTGGGCCGCTGCCCGCTCAGTGGGGGACACGGCAACCGGGCAAAGTGCACCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS GCA 72 bp CCCAGATCACCGCGGATGCCTCGCTGTCACAGGCGGTaGCCTCGCTGGCATCTGACGCTGGCATCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: PRSPRMPRCHRR*PRWHLTLASPP
Trigger: TGGGGGAGATGCCAGCGTCAGATGCCAGCGAGGGCACCGCCTGTGACAGCGAGGCATCCGCGGTGATCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 72 bp GCCTCCTGCTTCTCCCGGCAAACCTCGCCCAGGATGTaGGCCGCAGACGCTGACACGGGCTCCACATCCGCA +
Preference number: 6 (lower is better)
Translates to: ASCFSRQTSPRM*AADADTGSTSA
Trigger: TGCGGATGTGGAGCCCGTGTCAGCGTCTGCGGCCCACATCCTGGGCGAGGTTTGCCGGGAGAAGCAGGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CCGTCTCACGGTCCCCATCAATGTCCAGCTGGATGTTaGCTGGGAGGCCGCCAGTGCAGGGCGAGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: PSHGPHQCPAGC*LGGRQCRASSP
Trigger: CGGGCTGCTCGCCCTGCACTGGCGGCCTCCCAGCCAACATCCAGCTGGACATTGATGGGGACCGTGAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CCGCGGATGCCTCGCTGTCACAGGCGGTGCCCTCGCTaGCATCTGACGCTGGCATCTCCCCCACTGGCATCT +
Preference number: 6 (lower is better)
Translates to: PRMPRCHRRCPR*HLTLASPPLAS
Trigger: AGATGCCAGTGGGGGAGATGCCAGCGTCAGATGCCAGCGAGGGCACCGCCTGTGACAGCGAGGCATCCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CAA 72 bp GGGTCCTGCCAGCGTCACGGTGGCGTAGGGGTCACATaGCCCATTCACGATGGGGAGGCCCTGGCACTCGAC +
Preference number: 6 (lower is better)
Translates to: GSCQRHGGVGVT*PIHDGEALALD
Trigger: GTCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAATGTGACCCCTACGCCACCGTGACGCTGGCAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334062.8
ENST00000542651.2
ENST00000628197.1
ENST00000630618.2
CDS GCA 72 bp GCCGCAGGGAGCCCAGGTCGTCTGGCTTTAGGCTCTTaGTACCATTGTCCCGGGGCTGGAGGAAGTACCACG +
Preference number: 6 (lower is better)
Translates to: AAGSPGRLALGS*YHCPGAGGSTT
Trigger: CGTGGTACTTCCTCCAGCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAGACGACCTGGGCTCCCTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp CTCCCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTaGTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAA +
Preference number: 6 (lower is better)
Translates to: LPPKGCGFAWAA*WRHWARPADFK
Trigger: TTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp ATACGCTCCGTCTCACGGTCCCCATCAATGTCCAGCTaGATGTTGGCTGGGAGGCCGCCAGTGCAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: IRSVSRSPSMSS*MLAGRPPVQGE
Trigger: CTCGCCCTGCACTGGCGGCCTCCCAGCCAACATCCAGCTGGACATTGATGGGGACCGTGAGACGGAGCGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CCTCCCAAAGGCTGCGGCTTTGCATGGGCAGCTTGCTaGCGCCACTGGGCGCGTCCCGCAGACTTTAAATGG +
Preference number: 6 (lower is better)
Translates to: PPKGCGFAWAAC*RHWARPADFKW
Trigger: CCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCCTTTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 90 bp TTGCCTGAAGGGTCCTGCCAGCGTCACGGTGGCGTAGGGGTCACATaGCCCATTCACGATGGGGAGGCCCTGGCACTCGACGATGCGTGT +
Preference number: 6 (lower is better)
Translates to: LPEGSCQRHGGVGVT*PIHDGEALALDDAC
Trigger: ACACGCATCGTCGAGTGCCAGGGCCTCCCCATCGTGAATGGGCAATGTGACCCCTACGCCACCGTGACGCTGGCAGGACCCTTCAGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 72 bp ACGGTCGGGCAGCTCACCCCAGACTCAGTGATGGCGTaGAAGACGCGGTCCACATACTGCCGTAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: TVGQLTPDSVMA*KTRSTYCRRFS
Trigger: GGAGAACCTACGGCAGTATGTGGACCGCGTCTTCCACGCCATCACTGAGTCTGGGGTGAGCTGCCCGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp GGCTGCGGCTTTGCATGGGCAGCTTGCTGGCGCCACTaGGCGCGTCCCGCAGACTTTAAATGGAATGAGTGG +
Preference number: 6 (lower is better)
Translates to: GCGFAWAACWRH*ARPADFKWNEW
Trigger: CCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCAAGCTGCCCATGCAAAGCCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp AGCCGCAGGGAGCCCAGGTCGTCTGGCTTTAGGCTCTaGCTACCATTGTCCCGGGGCTGGAGGAAGTACCAC +
Preference number: 6 (lower is better)
Translates to: SRREPRSSGFRL*LPLSRGWRKYH
Trigger: GTGGTACTTCCTCCAGCCCCGGGACAATGGTAGCAAGAGCCTAAAGCCAGACGACCTGGGCTCCCTGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CCCGGGGCTGGAGGAAGTACCACGCCTCGTAGGAGCTaGACTGCCGCAGGACTTTCAACGGGATCCTTAGTT +
Preference number: 6 (lower is better)
Translates to: PGAGGSTTPRRS*TAAGLSTGSLV
Trigger: AACTAAGGATCCCGTTGAAAGTCCTGCGGCAGTCCAGCTCCTACGAGGCGTGGTACTTCCTCCAGCCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp TCGATCCAGTCCTTGGCCTCCACGCAGTTGTTGGCCTaGATGTACAGCGCACGCTCTGGCTGGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: SIQSLASTQLLA*MYSARSGWMTW
Trigger: CCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp TGCTGGCGCCACTGGGCGCGTCCCGCAGACTTTAAATaGAATGAGTGGAGGTCTCGGACTGCTGCCGGATGT +
Preference number: 6 (lower is better)
Translates to: CWRHWARPADFK*NEWRSRTAAGC
Trigger: ACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTGGCGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp GGCTCTGGCATATCTCCTCGATGGCGGGCTTCAGGGTaGCATGCAGGTAATGCATCCCCGCCAGCTTCATGG +
Preference number: 6 (lower is better)
Translates to: GSGISPRWRASG*HAGNASPPASW
Trigger: CCATGAAGCTGGCGGGGATGCATTACCTGCATGTCACCCTGAAGCCCGCCATCGAGGAGATATGCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp TGCACTTTGCCCTGCACTTCCGAGTCAGCGTCCACGTaGTGCAGCTGGAACCAGGTGTCCCTGTTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: CTLPCTSESAST*CSWNQVSLLWY
Trigger: GTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGCAGGGCAAAGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CCCTGCACTTCCGAGTCAGCGTCCACGTGCTGCAGCTaGAACCAGGTGTCCCTGTTGTGGTACTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: PCTSESASTCCS*NQVSLLWYFCK
Trigger: CTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp TGGACTTGGACAGGCTGCCGAGGGTCTGAACGGTCTTaGAGATCAATGTCAGCGTCCTGGACGTCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: WTWTGCRGSERS*RSMSASWTSGG
Trigger: ACCCCCAGACGTCCAGGACGCTGACATTGATCTCCAAGACCGTTCAGACCCTCGGCAGCCTGTCCAAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp GCGTCCACGTGCTGCAGCTGGAACCAGGTGTCCCTGTaGTGGTACTTCTGCAAGTCCTCCTTCTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: ASTCCSWNQVSL*WYFCKSSFWMA
Trigger: GGCCATCCAGAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp GTGAGAATGTCGATCCAGTCCTTGGCCTCCACGCAGTaGTTGGCCTGGATGTACAGCGCACGCTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VRMSIQSLASTQ*LAWMYSARSGW
Trigger: CCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp CTGGAAGGCTCCAAGGGGGAAACACGTAGGTGTCTCTaGGGCGGATGGCAGACCCAGGGGTTTGCTGTGATC +
Preference number: 6 (lower is better)
Translates to: LEGSKGETRRCL*GGWQTQGFAVI
Trigger: GATCACAGCAAACCCCTGGGTCTGCCATCCGCCCAAGAGACACCTACGTGTTTCCCCCTTGGAGCCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CAA 90 bp TCCGAGTCAGCGTCCACGTGCTGCAGCTGGAACCAGGTGTCCCTGTaGTGGTACTTCTGCAAGTCCTCCTTCTGGATGGCCACCTTCCCT +
Preference number: 6 (lower is better)
Translates to: SESASTCCSWNQVSL*WYFCKSSFWMATFP
Trigger: AGGGAAGGTGGCCATCCAGAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 90 bp CTCACTTTGGTGAGAATGTCGATCCAGTCCTTGGCCTCCACGCAGTaGTTGGCCTGGATGTACAGCGCACGCTCTGGCTGGATGACCTGG +
Preference number: 6 (lower is better)
Translates to: LTLVRMSIQSLASTQ*LAWMYSARSGWMTW
Trigger: CCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCACCAAAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp GCTTTAGCGTCTTGTAGGTCTCCTGGGGGTCGTCAATaGCGAACGTCGAATACTCCTCCTGCTCCGGGCCGT +
Preference number: 6 (lower is better)
Translates to: ALASCRSPGGRQ*RTSNTPPAPGR
Trigger: ACGGCCCGGAGCAGGAGGAGTATTCGACGTTCGTCATTGACGACCCCCAGGAGACCTACAAGACGCTAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp ACTTTGCCCTGCACTTCCGAGTCAGCGTCCACGTGCTaGAGCTGGAACCAGGTGTCCCTGTTGTGGTACTTC +
Preference number: 6 (lower is better)
Translates to: TLPCTSESASTC*SWNQVSLLWYF
Trigger: GAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGACGCTGACTCGGAAGTGCAGGGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp GGGCGCAAAGAACCTCAGGAAGATGAAGCTGCTCACTaGAGTGTACCTGACGTCCGGGTCATCCTGGAAGCG +
Preference number: 6 (lower is better)
Translates to: GRKEPQEDEAAH*SVPDVRVILEA
Trigger: CGCTTCCAGGATGACCCGGACGTCAGGTACACTGCAGTGAGCAGCTTCATCTTCCTGAGGTTCTTTGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp AGGTTTTTGGCTTCACCGATCTTGATCTTCACGCTCTaGAAGACCCGGAGCCCCTCGTCCTCCACCGCCATG +
Preference number: 6 (lower is better)
Translates to: RFLASPILIFTL*KTRSPSSSTAM
Trigger: CATGGCGGTGGAGGACGAGGGGCTCCGGGTCTTCCAGAGCGTGAAGATCAAGATCGGTGAAGCCAAAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp TCCACGTGCTGCAGCTGGAACCAGGTGTCCCTGTTGTaGTACTTCTGCAAGTCCTCCTTCTGGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: STCCSWNQVSLL*YFCKSSFWMAT
Trigger: GGTGGCCATCCAGAAGGAGGACTTGCAGAAGTACCACAACAGGGACACCTGGTTCCAGCTGCAGCACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp GCATCCCCGCCAGCTTCATGGTCTCGTCGATGCACTTaGACGCCAGTGAGTTTCCTCGGAAGATGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: ASPPASWSRRCT*TPVSFLGRWCW
Trigger: CCAACACCATCTTCCGAGGAAACTCACTGGCGTCCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp AGAATGTCGATCCAGTCCTTGGCCTCCACGCAGTTGTaGGCCTGGATGTACAGCGCACGCTCTGGCTGGATG +
Preference number: 6 (lower is better)
Translates to: RMSIQSLASTQL*AWMYSARSGWM
Trigger: CATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 90 bp ACTTTGGTGAGAATGTCGATCCAGTCCTTGGCCTCCACGCAGTTGTaGGCCTGGATGTACAGCGCACGCTCTGGCTGGATGACCTGGAAC +
Preference number: 6 (lower is better)
Translates to: TLVRMSIQSLASTQL*AWMYSARSGWMTWN
Trigger: GTTCCAGGTCATCCAGCCAGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCACCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp CTCGCAGATTTGGACTTGGACAGGCTGCCGAGGGTCTaGACGGTCTTGGAGATCAATGTCAGCGTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: LADLDLDRLPRV*TVLEINVSVLD
Trigger: GTCCAGGACGCTGACATTGATCTCCAAGACCGTTCAGACCCTCGGCAGCCTGTCCAAGTCCAAATCTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp AGAGGCTGTAGCAGGAGGCTGGAATTTCCAGCCCAGTaGGATTTCACGGTGCAACTGGAAGGCTCCAAGGGG +
Preference number: 6 (lower is better)
Translates to: RGCSRRLEFPAQ*DFTVQLEGSKG
Trigger: CCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGCTACAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS GCA 72 bp GGTCCAGGTTCACCGTGCAGTAGCAATCCCTCATCTTaGTCGGCCCCGGGTAAGAGGGAAGGTTTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: GPGSPCSSNPSS*SAPGKREGFWL
Trigger: AAGCCAAAAACCTTCCCTCTTACCCGGGGCCGAGCAAGATGAGGGATTGCTACTGCACGGTGAACCTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp GGTAATGCATCCCCGCCAGCTTCATGGTCTCGTCGATaGACTTGGACGCCAGTGAGTTTCCTCGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: GNASPPASWSRR*TWTPVSFLGRW
Trigger: CCATCTTCCGAGGAAACTCACTGGCGTCCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGATGCATTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp TGGGGGTCGTCAATGACGAACGTCGAATACTCCTCCTaGTCCGGGCCGTCATACACAGATTTGCTCCCACAG +
Preference number: 6 (lower is better)
Translates to: WGSSMTNVEYSS*SGPSYTDLLPQ
Trigger: CTGTGGGAGCAAATCTGTGTATGACGGCCCGGAGCAGGAGGAGTATTCGACGTTCGTCATTGACGACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp CACTGGGCGCGTCCCGCAGACTTTAAATGGAATGAGTaGAGGTCTCGGACTGCTGCCGGATGTAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: HWARPADFKWNE*RSRTAAGCSSG
Trigger: TCCAGAACTACATCCGGCAGCAGTCCGAGACCTCCACTCATTCCATTTAAAGTCTGCGGGACGCGCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp TGCATCCCCGCCAGCTTCATGGTCTCGTCGATGCACTaGGACGCCAGTGAGTTTCCTCGGAAGATGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CIPASFMVSSMH*DASEFPRKMVL
Trigger: CAACACCATCTTCCGAGGAAACTCACTGGCGTCCAAGTGCATCGACGAGACCATGAAGCTGGCGGGGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 90 bp TTCTGGTTGCACTGGCTCACTTTGGTGAGAATGTCGATCCAGTCCTaGGCCTCCACGCAGTTGTTGGCCTGGATGTACAGCGCACGCTCT +
Preference number: 6 (lower is better)
Translates to: FWLHWLTLVRMSIQS*ASTQLLAWMYSARS
Trigger: AGAGCGTGCGCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCACCAAAGTGAGCCAGTGCAACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp GGAGGCTGGAATTTCCAGCCCAGTGAGATTTCACGGTaGAACTGGAAGGCTCCAAGGGGGAAACACGTAGGT +
Preference number: 6 (lower is better)
Translates to: GGWNFQPSEISR*NWKAPRGKHVG
Trigger: ACCTACGTGTTTCCCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 72 bp CCTCCTCCAGCTTCTCCACTGCCAGGATGTTCTCGATaGGAATGCTGTAGAGAGGCTGGTCCCCTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: PPPASPLPGCSR*ECCREAGPLCF
Trigger: AAAGCAAAGGGGACCAGCCTCTCTACAGCATTCCCATCGAGAACATCCTGGCAGTGGAGAAGCTGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp CACTGGCTCACTTTGGTGAGAATGTCGATCCAGTCCTaGGCCTCCACGCAGTTGTTGGCCTGGATGTACAGC +
Preference number: 6 (lower is better)
Translates to: HWLTLVRMSIQS*ASTQLLAWMYS
Trigger: GCTGTACATCCAGGCCAACAACTGCGTGGAGGCCAAGGACTGGATCGACATTCTCACCAAAGTGAGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp CCTCCTGCATCTTCTCCAGCTTGCTCATGTACAAGTTaGAGAGGGAGTAGATACGCTCCGTCTCACGGTCCC +
Preference number: 6 (lower is better)
Translates to: PPASSPACSCTS*RGSRYAPSHGP
Trigger: GGGACCGTGAGACGGAGCGTATCTACTCCCTCTTCAACTTGTACATGAGCAAGCTGGAGAAGATGCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp TTCGTCTTCTTGAACTTGTCCCTCTTATACTGGGCGTaGTCCTGCTCCAAAGCCCCAACCCCAGCGATGACT +
Preference number: 6 (lower is better)
Translates to: FVFLNLSLLYWA*SCSKAPTPAMT
Trigger: AGTCATCGCTGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 72 bp CCGATGGGGTGCTCCTGGCTTCCATATTTCGTCTTCTaGAACTTGTCCCTCTTATACTGGGCGTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PMGCSWLPYFVF*NLSLLYWACSC
Trigger: GCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAGCCAGGAGCACCCCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CAA 90 bp CAGCCTCGGCCGTCTCCTCTTACAACCCTGGAGAGATGTGAAAGCTaGACGACGGACGGTGACTTTGTTTGCTCCGAAAATCCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: QPRPSPLTTLERCES*TTDGDFVCSENPSK
Trigger: CTTGGAAGGATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCTCTCCAGGGTTGTAAGAGGAGACGGCCGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS GCA 72 bp CTCTTGATCATGAACCCTTCTTTAAGCACGATGGGCTaGTCAACACTCTTGGGGTCTCTTCTCCCCGAGGAC +
Preference number: 6 (lower is better)
Translates to: LLIMNPSLSTMG*STLLGSLLPED
Trigger: GTCCTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAAAGAAGGGTTCATGATCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp TTCTTGAACTTGTCCCTCTTATACTGGGCGTGCTCCTaGTCCAAAGCCCCAACCCCAGCGATGACTTGCTTT +
Preference number: 6 (lower is better)
Translates to: FLNLSLLYWACS*SKAPTPAMTCF
Trigger: AAAGCAAGTCATCGCTGGGGTTGGGGCTTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS CCA 72 bp TGGAATTTCCAGCCCAGTGAGATTTCACGGTGCAACTaGAAGGCTCCAAGGGGGAAACACGTAGGTGTCTCT +
Preference number: 6 (lower is better)
Translates to: WNFQPSEISRCN*KAPRGKHVGVS
Trigger: AGAGACACCTACGTGTTTCCCCCTTGGAGCCTTCCAGTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CAA 72 bp GGGTGCTCCTGGCTTCCATATTTCGTCTTCTTGAACTaGTCCCTCTTATACTGGGCGTGCTCCTGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: GCSWLPYFVFLN*SLLYWACSCSK
Trigger: TTTGGAGCAGGAGCACGCCCAGTATAAGAGGGACAAGTTCAAGAAGACGAAATATGGAAGCCAGGAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS TCA 72 bp CGTCTCCTCTTACAACCCTGGAGAGATGTGAAAGCTTaGCGACGGACGGTGACTTTGTTTGCTCCGAAAATC +
Preference number: 6 (lower is better)
Translates to: RLLLQPWRDVKA*RRTVTLFAPKI
Trigger: GATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCTCTCCAGGGTTGTAAGAGGAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS GCA 72 bp CCACGTCTTCCTCCTCAAAGTCAAAGTGGGACTTCTTaGTGTAGCTACAGGGCCGGGTCACCTCAAAATAAA +
Preference number: 6 (lower is better)
Translates to: PRLPPQSQSGTS*CSYRAGSPQNK
Trigger: TTTATTTTGAGGTGACCCGGCCCTGTAGCTACAGCAAGAAGTCCCACTTTGACTTTGAGGAGGAAGACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334062.8
ENST00000542651.2
ENST00000628197.1
ENST00000630618.2
CDS GCA 72 bp GACTCAGTGATGGCGTGGAAGACGCGGTCCACATACTaGCGTAGGTTCTCCATGTTGTTTTCAAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: DSVMAWKTRSTY*RRFSMLFSRFS
Trigger: AGAAAACCTTGAAAACAACATGGAGAACCTACGGCAGTATGTGGACCGCGTCTTCCACGCCATCACTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp AGATGTGAAAGCTTGACGACGGACGGTGACTTTGTTTaGTCCGAAAATCCTTCCAAGAGGACTGTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RCESLTTDGDFV*SENPSKRTVCC
Trigger: GCAGCAGACAGTCCTCTTGGAAGGATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 72 bp ACAAACACAAAATTCCCAGAGGCTGTAGCAGGAGGCTaGAATTTCCAGCCCAGTGAGATTTCACGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: TNTKFPEAVAGG*NFQPSEISRCN
Trigger: GTTGCACCGTGAAATCTCACTGGGCTGGAAATTCCAGCCTCCTGCTACAGCCTCTGGGAATTTTGTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CAA 72 bp CCGTCTCCTCTTACAACCCTGGAGAGATGTGAAAGCTaGACGACGGACGGTGACTTTGTTTGCTCCGAAAAT +
Preference number: 6 (lower is better)
Translates to: PSPLTTLERCES*TTDGDFVCSEN
Trigger: ATTTTCGGAGCAAACAAAGTCACCGTCCGTCGTCAAGCTTTCACATCTCTCCAGGGTTGTAAGAGGAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CAA 90 bp TTGATCATGAACCCTTCTTTAAGCACGATGGGCTGCTCAACACTCTaGGGGTCTCTTCTCCCCGAGGACGAAATCAGATCCAAGAAGTTC +
Preference number: 6 (lower is better)
Translates to: LIMNPSLSTMGCSTL*GSLLPEDEIRSKKF
Trigger: GAACTTCTTGGATCTGATTTCGTCCTCGGGGAGAAGAGACCCCAAGAGTGTTGAGCAGCCCATCGTGCTTAAAGAAGGGTTCATGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2
CDS GCA 72 bp GTTTGCTCCGAAAATCCTTCCAAGAGGACTGTCTGCTaGACAAACACAAAATTCCCAGAGGCTGTAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VCSENPSKRTVC*TNTKFPEAVAG
Trigger: TCCTGCTACAGCCTCTGGGAATTTTGTGTTTGTGCAGCAGACAGTCCTCTTGGAAGGATTTTCGGAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542651.2
ENST00000628197.1
CDS CCA 72 bp TTCTTAAAATTCTTCATCCCAAAGCGCTTCCGTCCTTaGGCCCTCTTGATCATGAACCCTTCTTTAAGCACG +
Preference number: 6 (lower is better)
Translates to: FLKFFIPKRFRP*ALLIMNPSLST
Trigger: CGTGCTTAAAGAAGGGTTCATGATCAAGAGGGCCCAAGGACGGAAGCGCTTTGGGATGAAGAATTTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334062.8
ENST00000630618.2