Pregenerated sensors for RASA2-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000250170Ensembl transcript IDs: ENST00000507770.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAATATTTTTAAACTTGCCGCTAACAGGTGCTGCAGCCAGATTTTaGAACCAAGGCATGCCTGTTTGTGCTCCTTCCAACACAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: TIFLNLPLTGAAARF*NQGMPVCAPSNTNT Trigger: AGTGTTTGTGTTGGAAGGAGCACAAACAGGCATGCCTTGGTTTCAAAATCTGGCTGCAGCACCTGTTAGCGGCAAGTTTAAAAATATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507770.1 |
||
| CDS TCA 72 bp | TTAAACTTGCCGCTAACAGGTGCTGCAGCCAGATTTTaGAACCAAGGCATGCCTGTTTGTGCTCCTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNLPLTGAAARF*NQGMPVCAPSN Trigger: GTTGGAAGGAGCACAAACAGGCATGCCTTGGTTTCAAAATCTGGCTGCAGCACCTGTTAGCGGCAAGTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507770.1 |
||
| CDS CAA 72 bp | TTTAAACTTGCCGCTAACAGGTGCTGCAGCCAGATTTaGAAACCAAGGCATGCCTGTTTGTGCTCCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FKLAANRCCSQI*KPRHACLCSFQ Trigger: TTGGAAGGAGCACAAACAGGCATGCCTTGGTTTCAAAATCTGGCTGCAGCACCTGTTAGCGGCAAGTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507770.1 |
||
| CDS CAA 90 bp | AACAATATTTTTAAACTTGCCGCTAACAGGTGCTGCAGCCAGATTTaGAAACCAAGGCATGCCTGTTTGTGCTCCTTCCAACACAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NNIFKLAANRCCSQI*KPRHACLCSFQHKH Trigger: GTGTTTGTGTTGGAAGGAGCACAAACAGGCATGCCTTGGTTTCAAAATCTGGCTGCAGCACCTGTTAGCGGCAAGTTTAAAAATATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507770.1 |
||
| CDS GCA 72 bp | CTGAACAATATTTTTAAACTTGCCGCTAACAGGTGCTaGAGCCAGATTTTGAAACCAAGGCATGCCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LNNIFKLAANRC*SQILKPRHACL Trigger: CAAACAGGCATGCCTTGGTTTCAAAATCTGGCTGCAGCACCTGTTAGCGGCAAGTTTAAAAATATTGTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507770.1 |
||