RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145715

Ensembl transcript IDs: ENST00000274376.11, ENST00000456692.6, ENST00000506290.1, ENST00000509953.1, ENST00000512763.5, ENST00000515800.6

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTTCATCTGAATaGGCCACGCAAATCTCATGCAATGCTGCTAAATCACGGGACAGG +
Preference number: 1 (lower is better)
Translates to: CCAPRSLLSVRSSSE*ATQISCNAAKSRDR
Trigger: CCTGTCCCGTGATTTAGCAGCATTGCATGAGATTTGCGTGGCTCATTCAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATaGGAGCTGAGCAGAAACCATTCATCTGTGGCATGCCCTTTCTGT +
Preference number: 1 (lower is better)
Translates to: ARTRRDPGSIPFNGI*ELSRNHSSVACPFC
Trigger: ACAGAAAGGGCATGCCACAGATGAATGGTTTCTGCTCAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR TCA 90 bp CCAGAAGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTGAATGAGCCACGCAAATCTCATGCA +
Preference number: 1 (lower is better)
Translates to: PEAFSIRAAVHHAHY*AFEVHLNEPRKSHA
Trigger: TGCATGAGATTTGCGTGGCTCATTCAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCTTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 90 bp GACGAAGGCGTTTATTGGATGTCCCTGGACTACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTTTCATCCAATCCTCTGCTTGTTCTG +
Preference number: 1 (lower is better)
Translates to: DEGVYWMSLDYFSVN*KMPADLSSNPLLVL
Trigger: CAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 90 bp ATCTCATGCAATGCTGCTAAATCACGGGACAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATC +
Preference number: 1 (lower is better)
Translates to: ISCNAAKSRDRSVLE*SVVSGSSGTFFKGI
Trigger: GATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACGGACCTGTCCCGTGATTTAGCAGCATTGCATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 90 bp ACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTAGGATaGTGGCCAGTAGTGTTCGGTCTTGTCCACATACATGTGATAAAG +
Preference number: 1 (lower is better)
Translates to: TTTIQAFREEKSSVG*WPVVFGLVHIHVIK
Trigger: CTTTATCACATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 90 bp ACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTTGTCCACATACATGTGATAAAGCAT +
Preference number: 1 (lower is better)
Translates to: TTIQAFREEKSSVGC*PVVFGLVHIHVIKH
Trigger: ATGCTTTATCACATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCA +
Preference number: 1 (lower is better)
Translates to: HVEIVQISCTDSLQG*WHSYSPAESWILFA
Trigger: TGCAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
3UTR-3UTR CCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGGACGAAGGCGTTTATTaGATGTCCCTGGACTACTTT +
Preference number: 2 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELDEGVY*MSLDYF
Trigger: AAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CCA 90 bp AGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTGATATTGAACATCCGTaGATTCAGGATGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: SFFNTCCCAPRSLLSVRSDIEHP*IQDGRT
Trigger: TGTCCTGCCATCCTGAATCCACGGATGTTCAATATC...ACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 2 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CCA 90 bp AGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTGAGACAGCAAAACTTTaGCAACTGGGTGTACTGAAA +
Preference number: 2 (lower is better)
Translates to: SFFNTCCCAPRSLLSVRSETAKL*QLGVLK
Trigger: TTTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTC...ACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 2 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 2 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR GCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTTCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT +
Preference number: 2 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKISSVGC*PVVFGL
Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTGAGGA...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT +
Preference number: 2 (lower is better)
Translates to: LATNISVLAAIGDGESEMVKQGC*PDEGVY
Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTCGTTCGAAGTTCATCTaGATGAGCCACGCAAATCTC +
Preference number: 2 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIRSKFI*MSHANL
Trigger: GAGATTTGCGTGGCTCATTCAGATGAACTTCGAACG...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 2 (lower is better)
Translates to: LPCLFLCHLVCITTTIQATRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGCTGATGAGGTTGTCTaGATAATCAAAGGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIADEVV*IIKGVA
Trigger: TGCTACCCCTTTGATTATGCAGACAACCTCATCAGC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGCTGATGAGGTTGTCTaGATAATCAAAGGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSADEVV*IIKGVA
Trigger: TGCTACCCCTTTGATTATGCAGACAACCTCATCAGC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp TTAGTGTGCATAACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTATTCCATAGAGTATCGTaGTCGAACACGCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: LVCITTTIQAFREEKSSVFHRVS*SNTQGP
Trigger: GGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAA...TACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGTTATGCACACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 2 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTGTGGACCTTTCTTTTaGTTGTGCCAACAGACTTCC +
Preference number: 2 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLCGPFF*LCQQTS
Trigger: GGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACA...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTGTGCTTCAAGGATCTaGTCCTTCTTTTTACTCTGG +
Preference number: 2 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMCASRI*SFFLLW
Trigger: CCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp TTTGTTGCTTTTGATGAATGGATTGACACCTTCCATGTAGGGCTCCTTAGCTCCTACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 2 (lower is better)
Translates to: FVAFDEWIDTFHVGLLSSYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...GGAGCTAAGGAGCCCTACATGGAAGGTGTCAATCCATTCATCAAAAGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: SRYSHSISFCERWSVHQGKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
3UTR-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCTGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 2 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVCPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAACAATCTTCAACTTGTaGTTCAAGGATCTGATCCTT +
Preference number: 2 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPTIFNL*FKDLIL
Trigger: AAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCCATCAAGTGTAATGTaGACCTTTCTTTTGATTGTG +
Preference number: 2 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWPSSVM*TFLLIV
Trigger: CACAATCAAAAGAAAGGTCCACATTACACTTGATGG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 2 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 2 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR GCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCA +
Preference number: 2 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLDSLQG*WHSYSP
Trigger: TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 2 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGATCTTGGATTTTGTTTaGATAGCTCACACATCACTG +
Preference number: 2 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLILDFV*IAHTSL
Trigger: CAGTGATGTGTGAGCTATGCAAACAAAATCCAAGAT...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 2 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIRFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAATCCTCTGCTTGTTCTaGAGTTTCTCCTGCAAAGTA +
Preference number: 2 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIILCLF*SFSCKV
Trigger: TACTTTGCAGGAGAAACTCCAGAACAAGCAGAGGAT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LATNISVLAAIGDGESEMSKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 2 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR GCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCGTTGAATGGGTAACATaGATTGATCAATACAACAAC +
Preference number: 2 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVVEWVT*IDQYNN
Trigger: GTTGTTGTATTGATCAATGCATGTTACCCATTCAAC...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR GCA 72 bp ATATGGGAGCTGAGCAGAAACCATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTCAACTGGCAGCGCATA +
Preference number: 3 (lower is better)
Translates to: IWELSRNHSSVA*PFCNRLNWQRI
Trigger: TATGCGCTGCCAGTTGAGCCGATTACAGAAAGGGCATGCCACAGATGAATGGTTTCTGCTCAGCTCCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR TCA 72 bp TTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTGAATGAGCCACGCAAA +
Preference number: 3 (lower is better)
Translates to: FSIRAAVHHAHY*AFEVHLNEPRK
Trigger: TTTGCGTGGCTCATTCAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR TCA 72 bp GATGTCAGGAGGAAGATCATCAAAGACAAACTCTTCTaGCCATACTGGGTTTTGCCCTTCCCTTGCATGAGT +
Preference number: 3 (lower is better)
Translates to: DVRRKIIKDKLF*PYWVLPFPCMS
Trigger: ACTCATGCAAGGGAAGGGCAAAACCCAGTATGGTCAGAAGAGTTTGTCTTTGATGATCTTCCTCCTGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR TCA 72 bp CCACGCTCATTACTGAGCGTTCGAAGTTCATCTGAATaGGCCACGCAAATCTCATGCAATGCTGCTAAATCA +
Preference number: 3 (lower is better)
Translates to: PRSLLSVRSSSE*ATQISCNAAKS
Trigger: TGATTTAGCAGCATTGCATGAGATTTGCGTGGCTCATTCAGATGAACTTCGAACGCTCAGTAATGAGCGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 72 bp GTCCCTGGACTACTTTTCCGTAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCCTCTGCTTGTTCTGGA +
Preference number: 3 (lower is better)
Translates to: VPGLLFRKLQNA*RPFIQSSACSG
Trigger: TCCAGAACAAGCAGAGGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTAGTCCAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 72 bp AATGCTGCTAAATCACGGGACAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCTTT +
Preference number: 3 (lower is better)
Translates to: NAAKSRDRSVLE*SVVSGSSGTFF
Trigger: AAAGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACGGACCTGTCCCGTGATTTAGCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 72 bp CAAGCTTTTCGTGAAGAAAAATCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTTGTCCACATACATGTG +
Preference number: 3 (lower is better)
Translates to: QAFREEKSSVGC*PVVFGLVHIHV
Trigger: CACATGTATGTGGACAAGACCGAACACTACTGGCCAGCATCCTACTGAGGATTTTTCTTCACGAAAAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 72 bp TCATCTGTGGCATGCCCTTTCTGTAATCGGCTCAACTaGCAGCGCATAAATAAGATATCAGGATCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: SSVACPFCNRLN*QRINKISGSLL
Trigger: AAGCAAAGATCCTGATATCTTATTTATGCGCTGCCAGTTGAGCCGATTACAGAAAGGGCATGCCACAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CAA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 3 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR GCA 72 bp CCATACTGGGTTTTGCCCTTCCCTTGCATGAGTTTTTaGTACTTGGACACTATTCAGGTAGATGTTACAATA +
Preference number: 3 (lower is better)
Translates to: PYWVLPFPCMSF*YLDTIQVDVTI
Trigger: TATTGTAACATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCAGTATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 72 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCAGAATCTTGGATTTTG +
Preference number: 3 (lower is better)
Translates to: VQISCTDSLQGC*HSYSPAESWIL
Trigger: CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR CCA 72 bp AAACATGATCATACGATGTTTGTTGCTTTTGATGAATaGATTGACACCTTCCATGTAGGGCTCCTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: KHDHTMFVAFDE*IDTFHVGLLSS
Trigger: GGAGCTAAGGAGCCCTACATGGAAGGTGTCAATCCATTCATCAAAAGCAACAAACATCGTATGATCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CAA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CAA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 3 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR-3UTR CAA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGATGTGGACCTTTCTTTaGATTGTGCCAACAGACTTC +
Preference number: 3 (lower is better)
Translates to: LATNISVLAAIGDGESEMMWTFL*IVPTDF
Trigger: GAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACAT...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATTCACAATCTTCAACTaGTGCTTCAAGGATCTGATC +
Preference number: 3 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEFTIFN*CFKDLI
Trigger: GATCAGATCCTTGAAGCACAAGTTGAAGATTGTGAA...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR GCA 72 bp ATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCAGCAGAATCTTGGATT +
Preference number: 3 (lower is better)
Translates to: IVQISCTDSLQG*WHSYSPAESWI
Trigger: AATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR CCA 72 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTaGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGAT +
Preference number: 3 (lower is better)
Translates to: SRYSHSISFCER*SVHQGSEVVKD
Trigger: ATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
3UTR-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
3UTR GCA 72 bp TCCTTAGCTCCAAATTCCACAAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAATATCAGTGTTCTTGCA +
Preference number: 3 (lower is better)
Translates to: SLAPNSTRFAKF*TDLATNISVLA
Trigger: TGCAAGAACACTGATATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCTTGTGGAATTTGGAGCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR CCA 72 bp CTGGCAATTCTTTCTCTTTTACCATCAAGTGTAATGTaGACCTTTCTTTTGATTGTGCCAACAGACTTCCAA +
Preference number: 3 (lower is better)
Translates to: LAILSLLPSSVM*TFLLIVPTDFQ
Trigger: TTGGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACATTACACTTGATGGTAAAAGAGAAAGAATTGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR-3UTR CAA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 3 (lower is better)
Translates to: LPCLFLCHLVCITTTIQAKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
3UTR TCA 72 bp AATCATTCACAATCTTCAACTTGTGCTTCAAGGATCTaGTCCTTCTTTTTACTCTGGCAATTCTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: NHSQSSTCASRI*SFFLLWQFFLF
Trigger: AAAGAGAAAGAATTGCCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGTGAATGATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCGCCGGTGCCGCTGCTaGGGCTGGGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWRRCRC*GWGHCS
Trigger: GCTGCAGTGGCCCCAGCCTCAGCAGCGGCACCGGCG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTAGGCCGCCCTCCTCACTaGCGGCCTCGGCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVGRPPH*RPRPPS
Trigger: TGATGGCGGCCGAGGCCGGCAGTGAGGAGGGCGGCC...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCGCCGGTGCCGCTGCTaGGGCTGGGGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLRRCRC*GWGHCS
Trigger: GCTGCAGTGGCCCCAGCCTCAGCAGCGGCACCGGCG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATGGCCGCCCTCCTCACTaGCGGCCTCGGCCGCCATCA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHGRPPH*RPRPPS
Trigger: TGATGGCGGCCGAGGCCGGCAGTGAGGAGGGCGGCC...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCTGCGGGATAGGCACTaGAGCCCGCTGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHLRDRH*SPLPRR
Trigger: GCGGCGCGGCAGCGGGCTCCAGTGCCTATCCCGCAG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCCTGCGGGATAGGCACTaGAGCCCGCTGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSLRDRH*SPLPRR
Trigger: GCGGCGCGGCAGCGGGCTCCAGTGCCTATCCCGCAG...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTACTCTGCCCTACCCTaGCCGCCCGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMYSALP*PPGSPR
Trigger: CCTGGGGCTCCCGGGCGGGCAGGGTAGGGCAGAGTA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGGATAGGGGGCGGCTaGCACAGGCAGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFRIGGG*HRQGRG
Trigger: CCCGCGGCCCTGCCTGTGGCAGCCGCCCCCTATCCT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCCCAGGCTCCCCAGCTaGCTGGGTTACGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSPRLPS*LGYGKP
Trigger: TGGCTTCCCGTAACCCAGGCAGCTGGGGAGCCTGGG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTACTCTGCCCTACCCTaGCCGCCCGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFYSALP*PPGSPR
Trigger: CCTGGGGCTCCCGGGCGGGCAGGGTAGGGCAGAGTA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAAGCCCGCTCTACTCTaGCCTACCCTGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYKPALL*PTLPAR
Trigger: CCGGGCGGGCAGGGTAGGGCAGAGTAGAGCGGGCTT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCAGGATAGGGGGCGGCTaGCACAGGCAGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVRIGGG*HRQGRG
Trigger: CCCGCGGCCCTGCCTGTGGCAGCCGCCCCCTATCCT...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGGCTCCCCAGCTGCCTaGGTTACGGGAAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEGSPAA*VTGSQV
Trigger: CACTTGGCTTCCCGTAACCCAGGCAGCTGGGGAGCC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGGGAAATCGACTGAACTaGTCACTACCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELGNRLN*SLPGAL
Trigger: GAGAGCTCCAGGTAGTGAGCAGTTCAGTCGATTTCC...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCCTTCACCCGACACACTaGGGGATAGGCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSLHPTH*GIGTGA
Trigger: GGCTCCAGTGCCTATCCCGCAGTGTGTCGGGTGAAG...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGGCTCCCCAGCTGCCTaGGTTACGGGAAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSGSPAA*VTGSQV
Trigger: CACTTGGCTTCCCGTAACCCAGGCAGCTGGGGAGCC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCACAGGGAAAGAGGCTaGGGCTGCTACCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLHRERG*GCYRSF
Trigger: GAAGGAGCGGTAGCAGCCTCAGCCTCTTTCCCTGTG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAACTTCCCTGCCTGCCTaGGGCGTTCTTCTGCTATCG +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPTSLPA*GVLLLS
Trigger: CGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATACTTCCCTGCCTGCCTaGGGCGTTCTTCTGCTATCG +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHTSLPA*GVLLLS
Trigger: CGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGGCCAGGAGTATTATCTaGGGGCCTCACAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELARSII*GPHKKT
Trigger: AGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGC...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 4 (lower is better)
Translates to: SFFNTCCCAPRSLLSVRSTRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...ACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAAGCCCGCTCTACTCTaGCCTACCCTGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIKPALL*PTLPAR
Trigger: CCGGGCGGGCAGGGTAGGGCAGAGTAGAGCGGGCTT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCACCAGACTTCCCTGCCTaGCTGAGGCGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPPDFPA*LRRSSA
Trigger: AGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGG...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHTARLP*LPEAFF
Trigger: GAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSTARLP*LPEAFF
Trigger: GAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPTARLP*LPEAFF
Trigger: GAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGAGCGGTCAACGGTATaGCCACCTCTTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGERSTV*PPLPPR
Trigger: ACGAGGAGGAAGAGGTGGCCATACCGTTGACCGCTC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGACTTCCCTGCCTGCCTaGGGCGTTCTTCTGCTATCG +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILTSLPA*GVLLLS
Trigger: CGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGT...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGTGTGGACCTTTCTTTTaGTTGTGCCAACAGACTTCC +
Preference number: 4 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELCGPFF*LCQQTS
Trigger: GGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACA...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCCAGACTTCCCTGCCTaGCTGAGGCGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMPDFPA*LRRSSA
Trigger: AGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCCAGACTTCCCTGCCTaGCTGAGGCGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLPDFPA*LRRSSA
Trigger: AGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMTARLP*LPEAFF
Trigger: GAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTATTCCATAGAGTATCGTaGTCGAACACGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVFHRVS*SNTQGP
Trigger: GGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAA...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGGAGCGGTCAACGGTATaGCCACCTCTTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILERSTV*PPLPPR
Trigger: ACGAGGAGGAAGAGGTGGCCATACCGTTGACCGCTC...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGAGCGGTCAACGGTATaGCCACCTCTTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIERSTV*PPLPPR
Trigger: ACGAGGAGGAAGAGGTGGCCATACCGTTGACCGCTC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTATACCACTGGTTAGTTaGAGGAGCGGTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: SFFNTCCCAPRSLLSVRSIPLVS*RSGQRY
Trigger: ATACCGTTGACCGCTCCTCCAACTAACCAGTGGTAT...ACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTATCCATGCAGAACACTaGGGCGAAGGCTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSIHAEH*GEGCYL
Trigger: CAGGTAGCAGCCTTCGCCCCAGTGTTCTGCATGGAT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ACAATCTTCAACTTGTGCTTCAAGGATCTGATCCTTCTTTTTACTCTGGCAATTCTTCACCCGACACACTaGGGGATAGGCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TIFNLCFKDLILLFTLAILHPTH*GIGTGA
Trigger: GGCTCCAGTGCCTATCCCGCAGTGTGTCGGGTGAAG...AATTGCCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATCCAGACTTCCCTGCCTaGCTGAGGCGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHPDFPA*LRRSSA
Trigger: AGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGG...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATTCCATAGAGTATCGTaGTCGAACACGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPFHRVS*SNTQGP
Trigger: GGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCCACTGGGGCGAAGGCTaGTACCTGACATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGHWGEG*YLTSLV
Trigger: AACCAATGATGTCAGGTAGCAGCCTTCGCCCCAGTG...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACACTGGGGCGAAGGCTaGTACCTGACATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEHWGEG*YLTSLV
Trigger: AACCAATGATGTCAGGTAGCAGCCTTCGCCCCAGTG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCGGGAAAACCGCCGCCTaGCCCGAGAGTCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVGKTAA*PESLSK
Trigger: CTTGCTGAGACTCTCGGGCCAGGCGGCGGTTTTCCC...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGATCCATGCAGAACACTaGGGCGAAGGCTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMIHAEH*GEGCYL
Trigger: CAGGTAGCAGCCTTCGCCCCAGTGTTCTGCATGGAT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELSLQGC*HSYSPA
Trigger: TGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCTTCAGCTCCCCAGGCTaGGGAAACAACAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSFSSPG*GNNNKR
Trigger: CCTTTTGTTGTTGTTTCCTCAGCCTGGGGAGCTGAA...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPTRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTACGAAGTTCATCTGAATaGGCCACGCAAATCTCATGC +
Preference number: 4 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVRSSSE*ATQISC
Trigger: GCATGAGATTTGCGTGGCTCATTCAGATGAACTTCG...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCAATACGTGCTGCTGTaGACCACGCTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHQYVLL*TTLITE
Trigger: CTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACAATACGTGCTGCTGTaGACCACGCTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEQYVLL*TTLITE
Trigger: CTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCACTGGGGCGAAGGCTaGTACCTGACATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLHWGEG*YLTSLV
Trigger: AACCAATGATGTCAGGTAGCAGCCTTCGCCCCAGTG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTAAGTACAAAGGACCCTaGCCTCCGATCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSKYKGP*PPITLS
Trigger: AGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAAGTACAAAGGACCCTaGCCTCCGATCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHKYKGP*PPITLS
Trigger: AGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAAGTACAAAGGACCCTaGCCTCCGATCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEKYKGP*PPITLS
Trigger: AGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAAGTACAAAGGACCCTaGCCTCCGATCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPKYKGP*PPITLS
Trigger: AGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTGTTGCTTTTGATGAATGGATTGACACCTTCCATGTAGGGCTCCTTAGCTCCATCTTCTACTGGCTCTaGTGGTGCAACTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: FVAFDEWIDTFHVGLLSSIFYWL*WCNWVK
Trigger: CTTTACCCAGTTGCACCACCAGAGCCAGTAGAAGAT...GGAGCTAAGGAGCCCTACATGGAAGGTGTCAATCCATTCATCAAAAGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGSSVGC*PVVFGL
Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTGAGGA...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPSSVGC*PVVFGL
Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTGAGGA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGATCCATGCAGAACACTaGGGCGAAGGCTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLIHAEH*GEGCYL
Trigger: CAGGTAGCAGCCTTCGCCCCAGTGTTCTGCATGGAT...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCAACGAGGAAATCGACTaGACTGCTCACTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSNEEID*TAHYLE
Trigger: CTCCAGGTAGTGAGCAGTTCAGTCGATTTCCTCGTT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGAACGAGGAAATCGACTaGACTGCTCACTACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LATNISVLAAIGDGESEMNEEID*TAHYLE
Trigger: CTCCAGGTAGTGAGCAGTTCAGTCGATTTCCTCGTT...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGTTCAGCTCCCCAGGCTaGGGAAACAACAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: LATNISVLAAIGDGESEMFSSPG*GNNNKR
Trigger: CCTTTTGTTGTTGTTTCCTCAGCCTGGGGAGCTGAA...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAACTTCCCTGCCTGCCTaGGGCGTTCTTCTGCTATCG +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSITSLPA*GVLLLS
Trigger: CGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTGTTGCTTTTGATGAATGGATTGACACCTTCCATGTAGGGCTCCTTAGCTCCCATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: FVAFDEWIDTFHVGLLSSHLAKK*KYKGPW
Trigger: CCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATG...GGAGCTAAGGAGCCCTACATGGAAGGTGTCAATCCATTCATCAAAAGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCCAGGAGTATTATCTaGGGGCCTCACAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPARSII*GPHKKT
Trigger: AGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGCCAGGAGTATTATCTaGGGGCCTCACAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSARSII*GPHKKT
Trigger: AGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGVKQGC*PDEGVY
Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWVKQGC*PDEGVY
Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGTGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWCPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCGAAGTTCATCTGAATaGGCCACGCAAATCTCATGC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHRSSSE*ATQISC
Trigger: GCATGAGATTTGCGTGGCTCATTCAGATGAACTTCG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCACGAAGTTCATCTGAATaGGCCACGCAAATCTCATGC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPRSSSE*ATQISC
Trigger: GCATGAGATTTGCGTGGCTCATTCAGATGAACTTCG...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACGTTCGAAGTTCATCTaGATGAGCCACGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERSKFI*MSHANL
Trigger: GAGATTTGCGTGGCTCATTCAGATGAACTTCGAACG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCGTTCGAAGTTCATCTaGATGAGCCACGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHRSKFI*MSHANL
Trigger: GAGATTTGCGTGGCTCATTCAGATGAACTTCGAACG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCGTTCGAAGTTCATCTaGATGAGCCACGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSRSKFI*MSHANL
Trigger: GAGATTTGCGTGGCTCATTCAGATGAACTTCGAACG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILHHAHY*AFEVHL
Trigger: CAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLHHAHY*AFEVHL
Trigger: CAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSHHAHY*AFEVHL
Trigger: CAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTG...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSHSSVA*PFCNRL
Trigger: GAGCCGATTACAGAAAGGGCATGCCACAGATGAATG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEHSSVA*PFCNRL
Trigger: GAGCCGATTACAGAAAGGGCATGCCACAGATGAATG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTTCCATAGAGTATCGTaGTCGAACACGCAGGGACCC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFFHRVS*SNTQGP
Trigger: GGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCTCCATCAAGGTGCTTaGAAGTGTTGTGGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSLHQGA*KCCGSK
Trigger: TTTCGAGCCACAACACTTGCAAGCACCTTGATGGAG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCCTCCATCAAGGTGCTTaGAAGTGTTGTGGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSLHQGA*KCCGSK
Trigger: TTTCGAGCCACAACACTTGCAAGCACCTTGATGGAG...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGACTGCTCCATCAAGGTaGTTGCAAGTGTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLTAPSR*LQVLWL
Trigger: GAGCCACAACACTTGCAAGCACCTTGATGGAGCAGT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCACTGCTCCATCAAGGTaGTTGCAAGTGTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSTAPSR*LQVLWL
Trigger: GAGCCACAACACTTGCAAGCACCTTGATGGAGCAGT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSRSVLE*SVVSGS
Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACGGACCT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPRSVLE*SVVSGS
Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACGGACCT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCAATACGTGCTGCTGTaGACCACGCTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILQYVLL*TTLITE
Trigger: CTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCACTGGGGCGAAGGCTaGTACCTGACATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLHWGEG*YLTSLV
Trigger: AACCAATGATGTCAGGTAGCAGCCTTCGCCCCAGTG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGAGTTTCGCTCTTGTTaGCCAGGCCCAAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMEFRSC*PGPSSS
Trigger: AGATGAACTTGGGCCTGGGCAACAAGAGCGAAACTC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAGACGCCAGGTAGTATaGCCCTTCATTTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERRQVV*PFISTS
Trigger: AGAAGTGGAAATGAAGGGGCATACTACCTGGCGTCT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512763.5
CDS-3UTR CCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCATACCACTGGTTAGTTaGAGGAGCGGTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSIPLVS*RSGQRY
Trigger: ATACCGTTGACCGCTCCTCCAACTAACCAGTGGTAT...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR CCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGAAGTACAAAGGACCCTaGCCTCCGATCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLKYKGP*PPITLS
Trigger: AGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTATCTTCTACTGGCTCTaGTGGTGCAACTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSIFYWL*WCNWVK
Trigger: CTTTACCCAGTTGCACCACCAGAGCCAGTAGAAGAT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAATCTTCTACTGGCTCTaGTGGTGCAACTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPIFYWL*WCNWVK
Trigger: CTTTACCCAGTTGCACCACCAGAGCCAGTAGAAGAT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCTCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSSSVGC*PVVFGL
Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTGAGGA...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACTGTCAAGTTTTCCGTaGTACCACTGGTTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAELSSFP*YHWLVG
Trigger: TCCAACTAACCAGTGGTATCACGGAAAACTTGACAG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEHLAKK*KYKGPW
Trigger: CCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACCTCCCATCATAAACTaGTTGTTTGGCGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEPPIIN*LFGVGH
Trigger: ATGTCCAACGCCAAACAATCAGTTTATGATGGGAGG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCCTCCCATCATAAACTaGTTGTTTGGCGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHPPIIN*LFGVGH
Trigger: ATGTCCAACGCCAAACAATCAGTTTATGATGGGAGG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLTRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYTRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCTGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSCPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAAAGACAAACTCTTCTaGCCATACTGGGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHKDKLF*PYWVLP
Trigger: GGGCAAAACCCAGTATGGTCAGAAGAGTTTGTCTTT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTATGGTATATGGGAGCTaGGCAGAAACCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSMVYGS*AETIHL
Trigger: CAGATGAATGGTTTCTGCTCAGCTCCCATATACCAT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTCGAAGTTCATCTGAATaGGCCACGCAAATCTCATGC +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIRSSSE*ATQISC
Trigger: GCATGAGATTTGCGTGGCTCATTCAGATGAACTTCG...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCGTTCGAAGTTCATCTaGATGAGCCACGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMRSKFI*MSHANL
Trigger: GAGATTTGCGTGGCTCATTCAGATGAACTTCGAACG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCACCACGCTCATTACTaGGCGTTCGAAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYHHAHY*AFEVHL
Trigger: CAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACACCACGCTCATTACTaGGCGTTCGAAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEHHAHY*AFEVHL
Trigger: CAGATGAACTTCGAACGCTCAGTAATGAGCGTGGTG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTTTTCAATACGTGCTGCTGTGCACCACGCTCATTACTGAGCGTTCGAAGTTGGTTTTGTTTTTGTTaGAGCAGTTCTGTTATAGCC +
Preference number: 4 (lower is better)
Translates to: SFFNTCCCAPRSLLSVRSWFCFC*SSSVIA
Trigger: GGCTATAACAGAACTGCTTCAACAAAAACAAAACCA...ACTTCGAACGCTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTGAAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCGCGAAGGCTGCTACCTaGCATCATTGGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSAKAAT*HHWFLY
Trigger: ATACAAAAACCAATGATGTCAGGTAGCAGCCTTCGC...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGCGAAGGCTGCTACCTaGCATCATTGGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSAKAAT*HHWFLY
Trigger: ATACAAAAACCAATGATGTCAGGTAGCAGCCTTCGC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGCGAAGGCTGCTACCTaGCATCATTGGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEAKAAT*HHWFLY
Trigger: ATACAAAAACCAATGATGTCAGGTAGCAGCCTTCGC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCCATGTTGGACATGCTaGATCCATGCAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYPCWTC*IHAEHW
Trigger: CCAGTGTTCTGCATGGATTCAGCATGTCCAACATGG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCGAAAACTTCCTCGCTaGACTAAAGAGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWRKLPR*TKEERK
Trigger: CTTCCTTTCCTCTTTAGTGCAGCGAGGAAGTTTTCG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSPEAFF*YRSVKF
Trigger: AAACTTGACAGAACGATAGCAGAAGAACGCCTCAGG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILHSSVA*PFCNRL
Trigger: GAGCCGATTACAGAAAGGGCATGCCACAGATGAATG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCTCCATCAAGGTGCTTaGAAGTGTTGTGGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLLHQGA*KCCGSK
Trigger: TTTCGAGCCACAACACTTGCAAGCACCTTGATGGAG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTACTGCTCCATCAAGGTaGTTGCAAGTGTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFTAPSR*LQVLWL
Trigger: GAGCCACAACACTTGCAAGCACCTTGATGGAGCAGT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGCCACGCAAATCTCATaGAATGCTGCTAAATCACGG +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLATQIS*NAAKSR
Trigger: CCGTGATTTAGCAGCATTGCATGAGATTTGCGTGGC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCAATACGTGCTGCTGTaGACCACGCTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYQYVLL*TTLITE
Trigger: CTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATGCTGATGAGGTTGTCTaGATAATCAAAGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHADEVV*IIKGVA
Trigger: TGCTACCCCTTTGATTATGCAGACAACCTCATCAGC...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCATCTTCTACTGGCTCTaGTGGTGCAACTGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSIFYWL*WCNWVK
Trigger: CTTTACCCAGTTGCACCACCAGAGCCAGTAGAAGAT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGACGAAGGCGTTTATTaGATGTCCCTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGDEGVY*MSLDYF
Trigger: AAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGACGAAGGCGTTTATTaGATGTCCCTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPDEGVY*MSLDYF
Trigger: AAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGACGAAGGCGTTTATTaGATGTCCCTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEDEGVY*MSLDYF
Trigger: AAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GCTCGAACACGCAGGGACCCTGGTTCAATACCTTTTAATGGTATATGGGAGCTGAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARTRRDPGSIPFNGIWELSKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...CAGCTCCCATATACCATTAAAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTAGAAACCATTCATCTGTaGCATGCCCTTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVETIHL*HALSVI
Trigger: GATTACAGAAAGGGCATGCCACAGATGAATGGTTTC...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATCCTCAGTAGGATGCTaGCCAGTAGTGTTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLESSVGC*PVVFGL
Trigger: AAGACCGAACACTACTGGCCAGCATCCTACTGAGGA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGATATTGAACATCCGTaGATTCAGGATGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPDIEHP*IQDGRT
Trigger: TGTCCTGCCATCCTGAATCCACGGATGTTCAATATC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTAACTTACTGGTTAGTTaGAGGAGCGGTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSNLLVS*RSGQRY
Trigger: ATACCGTTGACCGCTCCTCCAACTAACCAGTAAGTT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGCAGTCTTAACTTACTaGTTAGTTGGAGGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSAVLTY*LVGGAV
Trigger: GACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGCAGTCTTAACTTACTaGTTAGTTGGAGGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMAVLTY*LVGGAV
Trigger: GACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGCAGTCTTAACTTACTaGTTAGTTGGAGGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLAVLTY*LVGGAV
Trigger: GACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR TCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILHLAKK*KYKGPW
Trigger: CCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCCAGGAGTATTATCTaGGGGCCTCACAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFARSII*GPHKKT
Trigger: AGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGGTCCGGAAATAAAGTaGATAATCGCCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGGPEIK*IIARSI
Trigger: AATACTCCTGGCGATTATTCACTTTATTTCCGGACC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGGTCCGGAAATAAAGTaGATAATCGCCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWGPEIK*IIARSI
Trigger: AATACTCCTGGCGATTATTCACTTTATTTCCGGACC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGGTCCGGAAATAAAGTaGATAATCGCCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPGPEIK*IIARSI
Trigger: AATACTCCTGGCGATTATTCACTTTATTTCCGGACC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTCCTCCCATCATAAACTaGTTGTTTGGCGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIPPIIN*LFGVGH
Trigger: ATGTCCAACGCCAAACAATCAGTTTATGATGGGAGG...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCCTCCCATCATAAACTaGTTGTTTGGCGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLPPIIN*LFGVGH
Trigger: ATGTCCAACGCCAAACAATCAGTTTATGATGGGAGG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATTTGAGTACTTGTTCTTaGTCCTGCATTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHLSTCS*SCIGTG
Trigger: ACCTGTACCAATGCAGGATCAAGAACAAGTACTCAA...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTTGAGTACTTGTTCTTaGTCCTGCATTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSLSTCS*SCIGTG
Trigger: ACCTGTACCAATGCAGGATCAAGAACAAGTACTCAA...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCCATCCACTGTGTCATTaGGTACTTGTTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSHPLCH*VLVLDP
Trigger: AGGATCAAGAACAAGTACTCAATGACACAGTGGATG...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYVKQGC*PDEGVY
Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTAAAACAAGGCTGCTaGCCTGACGAAGGCGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFVKQGC*PDEGVY
Trigger: ATAAACGCCTTCGTCAGGTCAGCAGCCTTGTTTTAC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYCPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFCPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCCCTTCCCTTGCATaGGTTTTTGCTACTTGGACA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLECPSLA*VFATWT
Trigger: TGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGAAAGACAAACTCTTCTaGCCATACTGGGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLKDKLF*PYWVLP
Trigger: GGGCAAAACCCAGTATGGTCAGAAGAGTTTGTCTTT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGAAAGACAAACTCTTCTaGCCATACTGGGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMKDKLF*PYWVLP
Trigger: GGGCAAAACCCAGTATGGTCAGAAGAGTTTGTCTTT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGATGGTATATGGGAGCTaGGCAGAAACCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLMVYGS*AETIHL
Trigger: CAGATGAATGGTTTCTGCTCAGCTCCCATATACCAT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTAGATTCAAGCTTTTCGTaGAGAAAAATCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVDSSFS*RKILSR
Trigger: CCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATC...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGTAGGCCACTTATGCTaGACAGATTTCTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPVGHLC*TDFCKH
Trigger: GTGTTTACAGAAATCTGTTCAGCATAAGTGGCCTAC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGTAGGCCACTTATGCTaGACAGATTTCTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWVGHLC*TDFCKH
Trigger: GTGTTTACAGAAATCTGTTCAGCATAAGTGGCCTAC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGTAGGCCACTTATGCTaGACAGATTTCTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEVGHLC*TDFCKH
Trigger: GTGTTTACAGAAATCTGTTCAGCATAAGTGGCCTAC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGGATGGCAGGACAGATaGGTCGAAGAAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMGWQDR*VEEKQN
Trigger: GTTTTGTTTTTCTTCGACTCATCTGTCCTGCCATCC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGGATGGCAGGACAGATaGGTCGAAGAAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLGWQDR*VEEKQN
Trigger: GTTTTGTTTTTCTTCGACTCATCTGTCCTGCCATCC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAGGAGATGGAGAATCTaGGATGATATTGAACATCCG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERRWRI*DDIEHP
Trigger: CGGATGTTCAATATCATCTCAGATTCTCCATCTCCT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCGAAGTTCATCTGAATaGGCCACGCAAATCTCATGC +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLRSSSE*ATQISC
Trigger: GCATGAGATTTGCGTGGCTCATTCAGATGAACTTCG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACTGTCAAGTTTTCCGTaGTACCACCCCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLELSSFP*YHPFIS
Trigger: GGAAATGAAGGGGTGGTATCACGGAAAACTTGACAG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATACCTCGATCTTATACTaGGGAACCATGACTTCACAA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHTSILY*GTMTSQ
Trigger: TTGTGAAGTCATGGTTCCTCAGTATAAGATCGAGGT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506290.1
CDS-3UTR TCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCTGTCAAGTTTTCCGTaGTACCACCTCAACTTGGAA +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILLSSFP*YHLNLE
Trigger: TTCCAAGTTGAGGTGGTATCACGGAAAACTTGACAG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512763.5
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMPEAFF*YRSVKF
Trigger: AAACTTGACAGAACGATAGCAGAAGAACGCCTCAGG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGCCTCACAAGAAAACTaGAGACTTGACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSASQEN*RLDQLS
Trigger: TGACAGTTGGTCAAGTCTGCAGTTTTCTTGTGAGGC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPFHPIL*LFWSFS
Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGTTTTGCCCTTCCCTTaGATGAGTTTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGVLPFP*MSFCYL
Trigger: CAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAAC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGTTTTGCCCTTCCCTTaGATGAGTTTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWVLPFP*MSFCYL
Trigger: CAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAAC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCGTTTTGCCCTTCCCTTaGATGAGTTTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSVLPFP*MSFCYL
Trigger: CAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAAC...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTCATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFHSSVA*PFCNRL
Trigger: GAGCCGATTACAGAAAGGGCATGCCACAGATGAATG...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLERSVLE*SVVSGS
Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACGGACCT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGCCACGCAAATCTCATaGAATGCTGCTAAATCACGG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEATQIS*NAAKSR
Trigger: CCGTGATTTAGCAGCATTGCATGAGATTTGCGTGGC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACACTGGGGCGAAGGCTaGTACCTGACATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIHWGEG*YLTSLV
Trigger: AACCAATGATGTCAGGTAGCAGCCTTCGCCCCAGTG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCGACATGCTGAATCCATaGAGAACACTGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVDMLNP*RTLGRR
Trigger: CCTTCGCCCCAGTGTTCTGCATGGATTCAGCATGTC...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGCTGATGAGGTTGTCTaGATAATCAAAGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLADEVV*IIKGVA
Trigger: TGCTACCCCTTTGATTATGCAGACAACCTCATCAGC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATATCCTCTGCTTGTTCTaGAGTTTCTCCTGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHILCLF*SFSCKV
Trigger: TACTTTGCAGGAGAAACTCCAGAACAAGCAGAGGAT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGAAACCATTCATCTGTaGCATGCCCTTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEETIHL*HALSVI
Trigger: GATTACAGAAAGGGCATGCCACAGATGAATGGTTTC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGAAACCATTCATCTGTaGCATGCCCTTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPETIHL*HALSVI
Trigger: GATTACAGAAAGGGCATGCCACAGATGAATGGTTTC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGGATATTGAACATCCGTaGATTCAGGATGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILDIEHP*IQDGRT
Trigger: TGTCCTGCCATCCTGAATCCACGGATGTTCAATATC...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPSLQGC*HSYSPA
Trigger: TGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTCGTTTTGTGAAAGGTaGTCTGTACACCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLSFCER*SVHQGS
Trigger: TGAGCCTTGGTGTACAGACCACCTTTCACAAAACGA...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATGAGACAGCAAAACTTTaGCAACTGGGTGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHETAKL*QLGVLK
Trigger: TTTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTC...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATTTCCACTTCTTTTCTaGAGCCAGCTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPFPLLF*SQLPKF
Trigger: GAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
3UTR CAA 72 bp ACCATACTGGGTTTTGCCCTTCCCTTGCATGAGTTTTaGCTACTTGGACACTATTCAGGTAGATGTTACAAT +
Preference number: 4 (lower is better)
Translates to: TILGFALPLHEF*LLGHYSGRCYN
Trigger: ATTGTAACATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCAGTATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCTGTCAAGTTTTCCGTaGTACCACTGGTTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLLSSFP*YHWLVG
Trigger: TCCAACTAACCAGTGGTATCACGGAAAACTTGACAG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEHLAKK*KYKGPW
Trigger: CCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGGTCCGGAAATAAAGTaGATAATCGCCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIGPEIK*IIARSI
Trigger: AATACTCCTGGCGATTATTCACTTTATTTCCGGACC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACCTCCCATCATAAACTaGTTGTTTGGCGTTGGACAT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEPPIIN*LFGVGH
Trigger: ATGTCCAACGCCAAACAATCAGTTTATGATGGGAGG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATTTCGATAGTGATCTATaGTGTCCCCAATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHFDSDL*CPQCCY
Trigger: ATAACAGCATTGGGGACATCATAGATCACTATCGAA...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATTCGATAGTGATCTATaGTGTCCCCAATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEFDSDL*CPQCCY
Trigger: ATAACAGCATTGGGGACATCATAGATCACTATCGAA...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTTGAGTACTTGTTCTTaGTCCTGCATTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMLSTCS*SCIGTG
Trigger: ACCTGTACCAATGCAGGATCAAGAACAAGTACTCAA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTCATCCACTGTGTCATTaGGTACTTGTTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIHPLCH*VLVLDP
Trigger: AGGATCAAGAACAAGTACTCAATGACACAGTGGATG...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCACAAGGCTGCTGACCTaGCGAAGGCGTTTATTGGAT +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVTRLLT*RRRLLD
Trigger: ATCCAATAAACGCCTTCGTCAGGTCAGCAGCCTTGT...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAAAGACAAACTCTTCTaGCCATACTGGGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYKDKLF*PYWVLP
Trigger: GGGCAAAACCCAGTATGGTCAGAAGAGTTTGTCTTT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATATGGTATATGGGAGCTaGGCAGAAACCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYMVYGS*AETIHL
Trigger: CAGATGAATGGTTTCTGCTCAGCTCCCATATACCAT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTATGGTATATGGGAGCTaGGCAGAAACCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFMVYGS*AETIHL
Trigger: CAGATGAATGGTTTCTGCTCAGCTCCCATATACCAT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGATTCAAGCTTTTCGTaGAGAAAAATCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSDSSFS*RKILSR
Trigger: CCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHRWKYF*SHEYFL
Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCACGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPRWKYF*SHEYFL
Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGTAGGCCACTTATGCTaGACAGATTTCTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLVGHLC*TDFCKH
Trigger: GTGTTTACAGAAATCTGTTCAGCATAAGTGGCCTAC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGGATGGCAGGACAGATaGGTCGAAGAAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLGWQDR*VEEKQN
Trigger: GTTTTGTTTTTCTTCGACTCATCTGTCCTGCCATCC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGGATGGCAGGACAGATaGGTCGAAGAAAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEGWQDR*VEEKQN
Trigger: GTTTTGTTTTTCTTCGACTCATCTGTCCTGCCATCC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGCGAAGGCTGCTACCTaGCATCATTGGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYAKAAT*HHWFLY
Trigger: ATACAAAAACCAATGATGTCAGGTAGCAGCCTTCGC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTGTTGCTTTTGATGAATGGATTGACACCTTCCATGTAGGGCTCCTTAGCTCCGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: FVAFDEWIDTFHVGLLSSDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...GGAGCTAAGGAGCCCTACATGGAAGGTGTCAATCCATTCATCAAAAGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCTGTCAAGTTTTCCGTaGTACCACCTCGATCTTATA +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMLSSFP*YHLDLI
Trigger: TATAAGATCGAGGTGGTATCACGGAAAACTTGACAG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506290.1
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAGGAAATCGACTGAACTaGTCACTACCTGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIGNRLN*SLPGAL
Trigger: GAGAGCTCCAGGTAGTGAGCAGTTCAGTCGATTTCC...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFPEAFF*YRSVKF
Trigger: AAACTTGACAGAACGATAGCAGAAGAACGCCTCAGG...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCCTCACAAGAAAACTaGAGACTTGACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFASQEN*RLDQLS
Trigger: TGACAGTTGGTCAAGTCTGCAGTTTTCTTGTGAGGC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGCCTCACAAGAAAACTaGAGACTTGACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEASQEN*RLDQLS
Trigger: TGACAGTTGGTCAAGTCTGCAGTTTTCTTGTGAGGC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGCCTCACAAGAAAACTaGAGACTTGACCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYASQEN*RLDQLS
Trigger: TGACAGTTGGTCAAGTCTGCAGTTTTCTTGTGAGGC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGAAAACAGTTTGGCCTaGCAAAGAGACTATCATGAA +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSENSLA*QRDYHE
Trigger: TTCATGATAGTCTCTTTGGCAGGCCAAACTGTTTTC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMFHPIL*LFWSFS
Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTTTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIFHPIL*LFWSFS
Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEKLQNA*RPFIQS
Trigger: GGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCCTTGCATGAGTTTTTaGTACTTGGACACTATTCAG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWPCMSF*YLDTIQ
Trigger: CTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCCTTGCATGAGTTTTTaGTACTTGGACACTATTCAG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSPCMSF*YLDTIQ
Trigger: CTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTCATTCATCTGTGGCATaGCCTTTCTGTAATCGGCTC +
Preference number: 4 (lower is better)
Translates to: LPCLFLCHLVCITTTIQAHSSVA*PFCNRL
Trigger: GAGCCGATTACAGAAAGGGCATGCCACAGATGAATG...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAACTGCTCCATCAAGGTaGTTGCAAGTGTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSITAPSR*LQVLWL
Trigger: GAGCCACAACACTTGCAAGCACCTTGATGGAGCAGT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGTGGCTTTCATATACTaGTCCATCAAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEVAFIY*SIKVLA
Trigger: TGCAAGCACCTTGATGGAGCAGTATATGAAAGCCAC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPCLFLCHLVCITTTIQARSVLE*SVVSGS
Trigger: ACTTCCGGACACTACAGAGCATTCTAGAACGGACCT...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ACAATCTTCAACTTGTGCTTCAAGGATCTGATCCTTCTTTTTACTCTGGCAATTGCCACGCAAATCTCATaGAATGCTGCTAAATCACGG +
Preference number: 4 (lower is better)
Translates to: TIFNLCFKDLILLFTLAIATQIS*NAAKSR
Trigger: CCGTGATTTAGCAGCATTGCATGAGATTTGCGTGGC...AATTGCCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACAATACGTGCTGCTGTaGACCACGCTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIQYVLL*TTLITE
Trigger: CTCAGTAATGAGCGTGGTGCACAGCAGCACGTATTG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCA +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPDSLQG*WHSYSP
Trigger: TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGCTGATGAGGTTGTCTaGATAATCAAAGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEADEVV*IIKGVA
Trigger: TGCTACCCCTTTGATTATGCAGACAACCTCATCAGC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGYKLPV*KSSHGT
Trigger: GGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATA...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPYKLPV*KSSHGT
Trigger: GGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCTATCTGAAAACAGTTTaGCCTGCCAAAGAGACTATC +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSYLKTV*PAKETI
Trigger: GATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATA...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000456692.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATTATCTGAAAACAGTTTaGCCTGCCAAAGAGACTATC +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHYLKTV*PAKETI
Trigger: GATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATA...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
CDS-3UTR CCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGATCCTCTGCTTGTTCTaGAGTTTCTCCTGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLILCLF*SFSCKV
Trigger: TACTTTGCAGGAGAAACTCCAGAACAAGCAGAGGAT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGACGAAGGCGTTTATTaGATGTCCCTGGACTACTTT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEDEGVY*MSLDYF
Trigger: AAAGTAGTCCAGGGACATCCAATAAACGCCTTCGTC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATGTAATCGGCTCAACTaGCAGCGCATAAATAAGATA +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPCNRLN*QRINKI
Trigger: TATCTTATTTATGCGCTGCCAGTTGAGCCGATTACA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGATATTGAACATCCGTaGATTCAGGATGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYDIEHP*IQDGRT
Trigger: TGTCCTGCCATCCTGAATCCACGGATGTTCAATATC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGATATTGAACATCCGTaGATTCAGGATGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFDIEHP*IQDGRT
Trigger: TGTCCTGCCATCCTGAATCCACGGATGTTCAATATC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMSLQGC*HSYSPA
Trigger: TGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATCGTTTTGTGAAAGGTaGTCTGTACACCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLESFCER*SVHQGS
Trigger: TGAGCCTTGGTGTACAGACCACCTTTCACAAAACGA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGAGACAGCAAAACTTTaGCAACTGGGTGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLETAKL*QLGVLK
Trigger: TTTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAACTTACTGGTTAGTTaGAGGAGCGGTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYNLLVS*RSGQRY
Trigger: ATACCGTTGACCGCTCCTCCAACTAACCAGTAAGTT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAACTTACTGGTTAGTTaGAGGAGCGGTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLENLLVS*RSGQRY
Trigger: ATACCGTTGACCGCTCCTCCAACTAACCAGTAAGTT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTTTCCACTTCTTTTCTaGAGCCAGCTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMFPLLF*SQLPKF
Trigger: GAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAACTTCACAAGGCACATaGAACCCCTTCATTTCCACT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLETSQGT*NPFIST
Trigger: AGTGGAAATGAAGGGGTTCCATGTGCCTTGTGAAGT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506290.1
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGATACCACCTCAACTTaGAAGGGACAGAACTATATC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMDTTST*KGQNYI
Trigger: GATATAGTTCTGTCCCTTCCAAGTTGAGGTGGTATC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512763.5
CDS-3UTR TCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGAAAACTGCAGACTTaGCCAACTGTCATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHRKLQT*PTVISK
Trigger: TTTACTAATGACAGTTGGTCAAGTCTGCAGTTTTCT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGGTCCGGAAATAAAGTaGATAATCGCCAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLGPEIK*IIARSI
Trigger: AATACTCCTGGCGATTATTCACTTTATTTCCGGACC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTTCGATAGTGATCTATaGTGTCCCCAATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLFDSDL*CPQCCY
Trigger: ATAACAGCATTGGGGACATCATAGATCACTATCGAA...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGTTCGATAGTGATCTATaGTGTCCCCAATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LATNISVLAAIGDGESEMFDSDL*CPQCCY
Trigger: ATAACAGCATTGGGGACATCATAGATCACTATCGAA...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATTGAGTACTTGTTCTTaGTCCTGCATTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLELSTCS*SCIGTG
Trigger: ACCTGTACCAATGCAGGATCAAGAACAAGTACTCAA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACATCCACTGTGTCATTaGGTACTTGTTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEHPLCH*VLVLDP
Trigger: AGGATCAAGAACAAGTACTCAATGACACAGTGGATG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTCATCCACTGTGTCATTaGGTACTTGTTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFHPLCH*VLVLDP
Trigger: AGGATCAAGAACAAGTACTCAATGACACAGTGGATG...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGGATTCAAGCTTTTCGTaGAGAAAAATCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILDSSFS*RKILSR
Trigger: CCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATC...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGATTCAAGCTTTTCGTaGAGAAAAATCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLDSSFS*RKILSR
Trigger: CCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMRWKYF*SHEYFL
Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAGGAGATGGAGAATCTaGGATGATATTGAACATCCG +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYRRWRI*DDIEHP
Trigger: CGGATGTTCAATATCATCTCAGATTCTCCATCTCCT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAGGAGATGGAGAATCTaGGATGATATTGAACATCCG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLERRWRI*DDIEHP
Trigger: CGGATGTTCAATATCATCTCAGATTCTCCATCTCCT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGGAGATGGAGAATCTaGGATGATATTGAACATCCG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFRRWRI*DDIEHP
Trigger: CGGATGTTCAATATCATCTCAGATTCTCCATCTCCT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATGGTTTTGTTTTTGTTaGAGCAGTTCTGTTATAGCC +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPWFCFC*SSSVIA
Trigger: GGCTATAACAGAACTGCTTCAACAAAAACAAAACCA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGAAGGAGACATTAAACTaGAGTGAATTACCATGTTGG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWKETLN*SELPCW
Trigger: CCAACATGGTAATTCACTTCAGTTTAATGTCTCCTT...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGCTTCCCAAATTCCTaGACAGCAGTCTTAACTTAC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFSFPNS*TAVLTY
Trigger: GTAAGTTAAGACTGCTGTTCAGGAATTTGGGAAGCT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR GCA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTCGAAAACTTCCTCGCTaGACTAAAGAGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPCLFLCHLVCITTTIQARKLPR*TKEERK
Trigger: CTTCCTTTCCTCTTTAGTGCAGCGAGGAAGTTTTCG...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ACAATCTTCAACTTGTGCTTCAAGGATCTGATCCTTCTTTTTACTCTGGCAATTCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TIFNLCFKDLILLFTLAIPEAFF*YRSVKF
Trigger: AAACTTGACAGAACGATAGCAGAAGAACGCCTCAGG...AATTGCCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCCAACGTTTTCCTTTaGCCTTTTTCAGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAESNVFL*PFSEDN
Trigger: GTTATCTTCTGAAAAAGGGCAAAGGAAAACGTTGGA...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGAAAACAGTTTGGCCTaGCAAAGAGACTATCATGAA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLENSLA*QRDYHE
Trigger: TTCATGATAGTCTCTTTGGCAGGCCAAACTGTTTTC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFFHPIL*LFWSFS
Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATTTCATCCAATCCTCTaGTTGTTCTGGAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEFHPIL*LFWSFS
Trigger: GGAGAAACTCCAGAACAAGCAGAGGATTGGATGAAA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSKLQNA*RPFIQS
Trigger: GGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMKLQNA*RPFIQS
Trigger: GGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLKLQNA*RPFIQS
Trigger: GGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGTACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCCTTGCATGAGTTTTTaGTACTTGGACACTATTCAG +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMPCMSF*YLDTIQ
Trigger: CTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGTTTTGCCCTTCCCTTaGATGAGTTTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEVLPFP*MSFCYL
Trigger: CAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAAC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTTTTGCCCTTCCCTTaGATGAGTTTTTGCTACTTG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFVLPFP*MSFCYL
Trigger: CAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAAC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACTCCATCAAGGTGCTTaGAAGTGTTGTGGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSILHQGA*KCCGSK
Trigger: TTTCGAGCCACAACACTTGCAAGCACCTTGATGGAG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCATCTTGGATTTTGTTTaGATAGCTCACACATCACTG +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGILDFV*IAHTSL
Trigger: CAGTGATGTGTGAGCTATGCAAACAAAATCCAAGAT...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCA +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIDSLQG*WHSYSP
Trigger: TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCA +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLDSLQG*WHSYSP
Trigger: TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCCAATCTAACTGCATCTaGCAAAGAGACTATCATGAA +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGQSNCI*QRDYHE
Trigger: TTCATGATAGTCTCTTTGGCAGATGCAGTTAGATTG...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILYKLPV*KSSHGT
Trigger: GGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATA...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACTGATTGTTTGGCGTTaGACATATTTTAAATCGCTG +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAELIVWR*TYFKSL
Trigger: CAGCGATTTAAAATATGTCCAACGCCAAACAATCAG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCCTGATTGTTTGGCGTTaGACATATTTTAAATCGCTG +
Preference number: 4 (lower is better)
Translates to: SRYSHSISFCERWSVHQGLIVWR*TYFKSL
Trigger: CAGCGATTTAAAATATGTCCAACGCCAAACAATCAG...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCTGATTGTTTGGCGTTaGACATATTTTAAATCGCTG +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWLIVWR*TYFKSL
Trigger: CAGCGATTTAAAATATGTCCAACGCCAAACAATCAG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGTTCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWFLILH*YRFLKI
Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGAA...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATTCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEFLILH*YRFLKI
Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGAA...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATTTCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHFLILH*YRFLKI
Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGAA...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTTATCTGAAAACAGTTTaGCCTGCCAAAGAGACTATC +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIYLKTV*PAKETI
Trigger: GATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATA...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000456692.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTATCCTCTGCTTGTTCTaGAGTTTCTCCTGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFILCLF*SFSCKV
Trigger: TACTTTGCAGGAGAAACTCCAGAACAAGCAGAGGAT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTTGTAATCGGCTCAACTaGCAGCGCATAAATAAGATA +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKICNRLN*QRINKI
Trigger: TATCTTATTTATGCGCTGCCAGTTGAGCCGATTACA...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTGTAATCGGCTCAACTaGCAGCGCATAAATAAGATA +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMCNRLN*QRINKI
Trigger: TATCTTATTTATGCGCTGCCAGTTGAGCCGATTACA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGAAACCATTCATCTGTaGCATGCCCTTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEETIHL*HALSVI
Trigger: GATTACAGAAAGGGCATGCCACAGATGAATGGTTTC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGTTGCTTTTGATGAATaGATTGACACCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEVAFDE*IDTFHV
Trigger: TACATGGAAGGTGTCAATCCATTCATCAAAAGCAAC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATGTTGCTTTTGATGAATaGATTGACACCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHVAFDE*IDTFHV
Trigger: TACATGGAAGGTGTCAATCCATTCATCAAAAGCAAC...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFSLQGC*HSYSPA
Trigger: TGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTTTCCACTTCTTTTCTaGAGCCAGCTTCCCAAATTC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFFPLLF*SQLPKF
Trigger: GAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCCATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVHLAKK*KYKGPW
Trigger: CCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATG...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTTCGATAGTGATCTATaGTGTCCCCAATGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFFDSDL*CPQCCY
Trigger: ATAACAGCATTGGGGACATCATAGATCACTATCGAA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTAGTGTGCATAACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTAATGGTATATGGGAGCTaGGCAGAAACCATTCATCTG +
Preference number: 4 (lower is better)
Translates to: LVCITTTIQAFREEKSSVMVYGS*AETIHL
Trigger: CAGATGAATGGTTTCTGCTCAGCTCCCATATACCAT...TACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGTTATGCACACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGATTCAAGCTTTTCGTaGAGAAAAATCCTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEDSSFS*RKILSR
Trigger: CCTACTGAGGATTTTTCTTCACGAAAAGCTTGAATC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLRWKYF*SHEYFL
Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCGGTGGAAGTATTTCTaGAGCCATGAATATTTTCTC +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYRWKYF*SHEYFL
Trigger: GAGAAAATATTCATGGCTTCAGAAATACTTCCACCG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTTGGTTTTGTTTTTGTTaGAGCAGTTCTGTTATAGCC +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIWFCFC*SSSVIA
Trigger: GGCTATAACAGAACTGCTTCAACAAAAACAAAACCA...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTGGTTTTGTTTTTGTTaGAGCAGTTCTGTTATAGCC +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMWFCFC*SSSVIA
Trigger: GGCTATAACAGAACTGCTTCAACAAAAACAAAACCA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCGCGAAGGCTGCTACCTaGCATCATTGGTTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVAKAAT*HHWFLY
Trigger: ATACAAAAACCAATGATGTCAGGTAGCAGCCTTCGC...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIPEAFF*YRSVKF
Trigger: AAACTTGACAGAACGATAGCAGAAGAACGCCTCAGG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTCCAACGTTTTCCTTTaGCCTTTTTCAGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLSNVFL*PFSEDN
Trigger: GTTATCTTCTGAAAAAGGGCAAAGGAAAACGTTGGA...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGAAAACAGTTTGGCCTaGCAAAGAGACTATCATGAA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYENSLA*QRDYHE
Trigger: TTCATGATAGTCTCTTTGGCAGGCCAAACTGTTTTC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAAATTGCAAAATGCCTaGAGACCTTTCATCCAATCC +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEKLQNA*RPFIQS
Trigger: GGATTGGATGAAAGGTCTGCAGGCATTTTGCAATTT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTCCTTGCATGAGTTTTTaGTACTTGGACACTATTCAG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFPCMSF*YLDTIQ
Trigger: CTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGG...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACTCTGTCATTTAGTGTaGATAACAACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAELCHLV*ITTTIQ
Trigger: TTGAATCGTTGTTGTTATGCACACTAAATGACAGAG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCTCTGTCATTTAGTGTaGATAACAACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSLCHLV*ITTTIQ
Trigger: TTGAATCGTTGTTGTTATGCACACTAAATGACAGAG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCCTCTGTCATTTAGTGTaGATAACAACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSLCHLV*ITTTIQ
Trigger: TTGAATCGTTGTTGTTATGCACACTAAATGACAGAG...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACTTAACTCACAAGACTaGTTGCTTTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAELNSQD*LLSIIF
Trigger: AAAGATAATGGAAAGCAAGCAGTCTTGTGAGTTAAG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGATTCCCTTAACTCACAAGACTaGTTGCTTTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: FVKGGLYTKAQRLLKIDSLNSQD*LLSIIF
Trigger: AAAGATAATGGAAAGCAAGCAGTCTTGTGAGTTAAG...GGAATCAATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHRFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWRFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR GCA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPRFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCATCTTGGATTTTGTTTaGATAGCTCACACATCACTG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSILDFV*IAHTSL
Trigger: CAGTGATGTGTGAGCTATGCAAACAAAATCCAAGAT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGATAGCTTACAAGGTTaGTGGCATAGTTATTCACCA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFDSLQG*WHSYSP
Trigger: TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGATAGTGCAAATATCCTaGACAGATAGCTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: LATNISVLAAIGDGESEMIVQIS*TDSLQG
Trigger: ACCTTGTAAGCTATCTGTGCAGGATATTTGCACTAT...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGTTGAATGGGTAACATaGATTGATCAATACAACAAC +
Preference number: 4 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEVEWVT*IDQYNN
Trigger: GTTGTTGTATTGATCAATGCATGTTACCCATTCAAC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCACAATCTTCAACTTGTaGTTCAAGGATCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSTIFNL*FKDLIL
Trigger: AAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYYKLPV*KSSHGT
Trigger: GGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILFLILH*YRFLKI
Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGAA...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTATCTGAAAACAGTTTaGCCTGCCAAAGAGACTATC +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYYLKTV*PAKETI
Trigger: GATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTGTAATCGGCTCAACTaGCAGCGCATAAATAAGATA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYCNRLN*QRINKI
Trigger: TATCTTATTTATGCGCTGCCAGTTGAGCCGATTACA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTGTTGCTTTTGATGAATaGATTGACACCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIVAFDE*IDTFHV
Trigger: TACATGGAAGGTGTCAATCCATTCATCAAAAGCAAC...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCTCGTTTTGTGAAAGGTaGTCTGTACACCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVSFCER*SVHQGS
Trigger: TGAGCCTTGGTGTACAGACCACCTTTCACAAAACGA...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCCCATCAAGTGTAATGTaGACCTTTCTTTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSPSSVM*TFLLIV
Trigger: CACAATCAAAAGAAAGGTCCACATTACACTTGATGG...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAGAAAACTGCAGACTTaGCCAACTGTCATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYRKLQT*PTVISK
Trigger: TTTACTAATGACAGTTGGTCAAGTCTGCAGTTTTCT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAGAAAACTGCAGACTTaGCCAACTGTCATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLERKLQT*PTVISK
Trigger: TTTACTAATGACAGTTGGTCAAGTCTGCAGTTTTCT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCCATCCACTGTGTCATTaGGTACTTGTTCTTGATCCT +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVHPLCH*VLVLDP
Trigger: AGGATCAAGAACAAGTACTCAATGACACAGTGGATG...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGACATTAAACTGAAGTaGATTACCATGTTGGACATG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFDIKLK*ITMLDM
Trigger: CATGTCCAACATGGTAATTCACTTCAGTTTAATGTC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR TCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCAGCTTCCCAAATTCCTaGACAGCAGTCTTAACTTAC +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVSFPNS*TAVLTY
Trigger: GTAAGTTAAGACTGCTGTTCAGGAATTTGGGAAGCT...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS-3UTR TCA 90 bp TTAGTGTGCATAACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTATGTGCTTCAAGGATCTaGTCCTTCTTTTTACTCTGG +
Preference number: 4 (lower is better)
Translates to: LVCITTTIQAFREEKSSVCASRI*SFFLLW
Trigger: CCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACA...TACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGTTATGCACACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTCCAACGTTTTCCTTTaGCCTTTTTCAGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFSNVFL*PFSEDN
Trigger: GTTATCTTCTGAAAAAGGGCAAAGGAAAACGTTGGA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATACTTTTCCGTAAATTaGAAAATGCCTGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEYFSVN*KMPADL
Trigger: AAGGTCTGCAGGCATTTTGCAATTTACGGAAAAGTA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCTCTGTCATTTAGTGTaGATAACAACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMLCHLV*ITTTIQ
Trigger: TTGAATCGTTGTTGTTATGCACACTAAATGACAGAG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCTTAACTCACAAGACTaGTTGCTTTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: DSLQGCWHSYSPAESWILLNSQD*LLSIIF
Trigger: AAAGATAATGGAAAGCAAGCAGTCTTGTGAGTTAAG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAATCTTGGATTTTGTTTaGATAGCTCACACATCACTG +
Preference number: 4 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEILDFV*IAHTSL
Trigger: CAGTGATGTGTGAGCTATGCAAACAAAATCCAAGAT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTATCTTGGATTTTGTTTaGATAGCTCACACATCACTG +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFILDFV*IAHTSL
Trigger: CAGTGATGTGTGAGCTATGCAAACAAAATCCAAGAT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATCTGATTGTTTGGCGTTaGACATATTTTAAATCGCTG +
Preference number: 4 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHLIVWR*TYFKSL
Trigger: CAGCGATTTAAAATATGTCCAACGCCAAACAATCAG...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKISKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGTTGCTTTTGATGAATaGATTGACACCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFVAFDE*IDTFHV
Trigger: TACATGGAAGGTGTCAATCCATTCATCAAAAGCAAC...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGTTGCTTTTGATGAATaGATTGACACCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYVAFDE*IDTFHV
Trigger: TACATGGAAGGTGTCAATCCATTCATCAAAAGCAAC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCAGCTTACAAGGTTGCTaGCATAGTTATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVSLQGC*HSYSPA
Trigger: TGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCGAGACAGCAAAACTTTaGCAACTGGGTGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVETAKL*QLGVLK
Trigger: TTTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTC...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR TCA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTAGAAAACTGCAGACTTaGCCAACTGTCATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LPCLFLCHLVCITTTIQARKLQT*PTVISK
Trigger: TTTACTAATGACAGTTGGTCAAGTCTGCAGTTTTCT...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACCTTGCATGAGTTTTTaGTACTTGGACACTATTCAG +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIPCMSF*YLDTIQ
Trigger: CTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCTTAACTCACAAGACTaGTTGCTTTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYLNSQD*LLSIIF
Trigger: AAAGATAATGGAAAGCAAGCAGTCTTGTGAGTTAAG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATCTTAACTCACAAGACTaGTTGCTTTCCATTATCTTT +
Preference number: 4 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHLNSQD*LLSIIF
Trigger: AAAGATAATGGAAAGCAAGCAGTCTTGTGAGTTAAG...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR GCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGATTTGCTAAGTTCTaGACAGATTTAGCCACTAAT +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFRFAKF*TDLATN
Trigger: ATTAGTGGCTAAATCTGTGCAGAACTTAGCAAATCT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR GCA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGGTTGAATGGGTAACATaGATTGATCAATACAACAAC +
Preference number: 4 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLVEWVT*IDQYNN
Trigger: GTTGTTGTATTGATCAATGCATGTTACCCATTCAAC...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATGTTGAATGGGTAACATaGATTGATCAATACAACAAC +
Preference number: 4 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHVEWVT*IDQYNN
Trigger: GTTGTTGTATTGATCAATGCATGTTACCCATTCAAC...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp TTAGTGTGCATAACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTATATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACC +
Preference number: 4 (lower is better)
Translates to: LVCITTTIQAFREEKSSVYKLPV*KSSHGT
Trigger: GGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATA...TACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGTTATGCACACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CCA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYSKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLQGCWHSYSPAESWILFSKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CCA 90 bp TTAGTGTGCATAACAACAACGATTCAAGCTTTTCGTGAAGAAAAATCCTCAGTATGTAATCGGCTCAACTaGCAGCGCATAAATAAGATA +
Preference number: 4 (lower is better)
Translates to: LVCITTTIQAFREEKSSVCNRLN*QRINKI
Trigger: TATCTTATTTATGCGCTGCCAGTTGAGCCGATTACA...TACTGAGGATTTTTCTTCACGAAAAGCTTGAATCGTTGTTGTTATGCACACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR TCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATATGGTTTTGTTTTTGTTaGAGCAGTTCTGTTATAGCC +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIWFCFC*SSSVIA
Trigger: GGCTATAACAGAACTGCTTCAACAAAAACAAAACCA...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCTTCTTGATCCTGCATTaGTACAGGTTCCTTAAGATA +
Preference number: 4 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVFLILH*YRFLKI
Trigger: TATCTTAAGGAACCTGTACCAATGCAGGATCAAGAA...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR GCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATACTCTGTCATTTAGTGTaGATAACAACAACGATTCAA +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSILCHLV*ITTTIQ
Trigger: TTGAATCGTTGTTGTTATGCACACTAAATGACAGAG...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CCA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGTAAAATGTTTTACTaGGAGTTTATGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSISKMFY*EFMGFF
Trigger: GAAGAAGCCCATAAACTCCCAGTAAAACATTTTACT...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS GCA 90 bp GGCGGCTGCCACAGGCAGGGCCGCGGGTATCTTCACCCGACACACTaGGGGATAGGCACTGGAGCCCGCTGCCGCGCCGCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGCHRQGRGYLHPTH*GIGTGARCRAASSS
Trigger: GCTGGAGGAGGCGGCGCGGCAGCGGGCTCCAGTGCCTATCCCGCAGTGTGTCGGGTGAAGATACCCGCGGCCCTGCCTGTGGCAGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 90 bp AGTTCCAGCCACTCCGGTCTCCACCAGCCCAGGATAGGGGGCGGCTaGCACAGGCAGGGCCGCGGGTATCTTCACCCGACACACTGCGGG +
Preference number: 5 (lower is better)
Translates to: SSSHSGLHQPRIGGG*HRQGRGYLHPTHCG
Trigger: CCCGCAGTGTGTCGGGTGAAGATACCCGCGGCCCTGCCTGTGGCAGCCGCCCCCTATCCTGGGCTGGTGGAGACCGGAGTGGCTGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS CCA 90 bp TGGAGGAGCGGTCAACGGTATGGCCACCTCTTCCTCCTCGTATTCTaGTCCATCCAGAGAGTCACCTTCGTCCACTGTCCCGAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: WRSGQRYGHLFLLVF*SIQRVTFVHCPEAR
Trigger: GCGGGCCTCGGGACAGTGGACGAAGGTGACTCTCTGGATGGACCAGAATACGAGGAGGAAGAGGTGGCCATACCGTTGACCGCTCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 90 bp TGGCCTCCGATCACTCTCTCTTATAAGATAACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTCTGCTATCGTTCTGTCAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: WPPITLSYKITARLP*LPEAFFCYRSVKFS
Trigger: GGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATAAGAGAGAGTGATCGGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS CCA 90 bp CAGCTTCCCAAATTCCTGAACAGCAGTCTTAACTTACTGGTTAGTTaGAGGAGCGGTCAACGGTATGGCCACCTCTTCCTCCTCGTATTC +
Preference number: 5 (lower is better)
Translates to: QLPKFLNSSLNLLVS*RSGQRYGHLFLLVF
Trigger: GAATACGAGGAGGAAGAGGTGGCCATACCGTTGACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGCTGTTCAGGAATTTGGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS TCA 90 bp CCCCTTCATTTCCACTTCTTTTCTGGAGCCAGCTTCCCAAATTCCTaGACAGCAGTCTTAACTTACTGGTTAGTTGGAGGAGCGGTCAAC +
Preference number: 5 (lower is better)
Translates to: PLHFHFFSGASFPNS*TAVLTYWLVGGAVN
Trigger: GTTGACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGCTGTTCAGGAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAATGAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS GCA 90 bp TATAAGATAACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACTGGTTAGTTGG +
Preference number: 5 (lower is better)
Translates to: YKITARLPCLPEAFF*YRSVKFSVIPLVSW
Trigger: CCAACTAACCAGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 90 bp TATAAGATAACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACCCCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: YKITARLPCLPEAFF*YRSVKFSVIPPLHF
Trigger: GAAATGAAGGGGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS GCA 90 bp TATAAGATAACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACCTCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: YKITARLPCLPEAFF*YRSVKFSVIPPQLG
Trigger: TCCAAGTTGAGGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512763.5
CDS GCA 90 bp ATCTCATGCAATGCTGCTAAATCACGGGACAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCCCAAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: ISCNAAKSRDRSVLE*SVVSGSSGTFPSSS
Trigger: AGATGAACTTGGGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACGGACCTGTCCCGTGATTTAGCAGCATTGCATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS GCA 90 bp TATAAGATAACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACCTCGATCTTAT +
Preference number: 5 (lower is better)
Translates to: YKITARLPCLPEAFF*YRSVKFSVIPPRSY
Trigger: ATAAGATCGAGGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506290.1
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAAGAGTTTCGCTCTTGTaGCCCAGGCCCAAGTTCATC +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPRVSLL*PRPKFI
Trigger: GATGAACTTGGGCCTGGGCAACAAGAGCGAAACTCT...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCACATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPHPILC*FWSFSC
Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSHPILC*FWSFSC
Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGGCTCCATCAAGGTGCTaGCAAGTGTTGTGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILAPSRC*QVLWLE
Trigger: TTCGAGCCACAACACTTGCAAGCACCTTGATGGAGC...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGCTCCATCAAGGTGCTaGCAAGTGTTGTGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMAPSRC*QVLWLE
Trigger: TTCGAGCCACAACACTTGCAAGCACCTTGATGGAGC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGCTCCATCAAGGTGCTaGCAAGTGTTGTGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLAPSRC*QVLWLE
Trigger: TTCGAGCCACAACACTTGCAAGCACCTTGATGGAGC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLHPILC*FWSFSC
Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTAGCCACTAATATCAGTGTTCTTGCAGCAATAGGAGATGGAGAATCTGAGATGCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LATNISVLAAIGDGESEMHPILC*FWSFSC
Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...CATCTCAGATTCTCCATCTCCTATTGCTGCAAGAACACTGATATTAGTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGCTCCATCAAGGTGCTaGCAAGTGTTGTGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEAPSRC*QVLWLE
Trigger: TTCGAGCCACAACACTTGCAAGCACCTTGATGGAGC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCATCCAATCCTCTGCTaGTTCTGGAGTTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLHPILC*FWSFSC
Trigger: GCAGGAGAAACTCCAGAACAAGCAGAGGATTGGATG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAAGAGACAGCAAAACTTaGGCAACTGGGTGTACTGAA +
Preference number: 5 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERDSKT*ATGCTE
Trigger: TTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTCT...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS CCA 90 bp TCTCCACACATAGCAATAATCCTAAAATGGTTGACAACATTCATCTaGCTAAGAAATGAAAGTACAAAGGACCCTGGCCTCCGATCACTC +
Preference number: 5 (lower is better)
Translates to: SPHIAIILKWLTTFI*LRNESTKDPGLRSL
Trigger: GAGTGATCGGAGGCCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATGAATGTTGTCAACCATTTTAGGATTATTGCTATGTGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATGTGTCATTGAGTACTaGTTCTTGATCCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPCVIEY*FLILHW
Trigger: CCAATGCAGGATCAAGAACAAGTACTCAATGACACA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACCCTTGCATGAGTTTTaGCTACTTGGACACTATTCA +
Preference number: 5 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEPLHEF*LLGHYS
Trigger: TGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCACCCTTGCATGAGTTTTaGCTACTTGGACACTATTCA +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPPLHEF*LLGHYS
Trigger: TGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGG...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCCCTTGCATGAGTTTTaGCTACTTGGACACTATTCA +
Preference number: 5 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWPLHEF*LLGHYS
Trigger: TGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CAA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCGAATCTGAGATGATATaGAACATCCGTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: SRYSHSISFCERWSVHQGESEMI*NIRGFR
Trigger: CCTGAATCCACGGATGTTCAATATCATCTCAGATTC...GCCTTGGTGTACAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAAGAATCTGAGATGATATaGAACATCCGTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEESEMI*NIRGFR
Trigger: CCTGAATCCACGGATGTTCAATATCATCTCAGATTC...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGAGAGACAGCAAAACTTaGGCAACTGGGTGTACTGAA +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMRDSKT*ATGCTE
Trigger: TTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTCT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp TGGGTTTTGCCCTTCCCTTGCATGAGTTTTTGCTACTTGGACACTATTCAGGTATTCACAATCTTCAACTaGTGCTTCAAGGATCTGATC +
Preference number: 5 (lower is better)
Translates to: WVLPFPCMSFCYLDTIQVFTIFN*CFKDLI
Trigger: GATCAGATCCTTGAAGCACAAGTTGAAGATTGTGAA...TACCTGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCTATCTGAAAACAGTTaGGCCTGCCAAAGAGACTAT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILLSENS*ACQRDY
Trigger: ATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATAG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATGGTTTTGCCCTTCCCTaGCATGAGTTTTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYGFALP*HEFLLL
Trigger: AAGTAGCAAAAACTCATGCAAGGGAAGGGCAAAACC...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGGAATCTGAGATGATATaGAACATCCGTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMESEMI*NIRGFR
Trigger: CCTGAATCCACGGATGTTCAATATCATCTCAGATTC...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTGGAATCTGAGATGATATaGAACATCCGTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: AYKVAGIVIHQQNLGFCLESEMI*NIRGFR
Trigger: CCTGAATCCACGGATGTTCAATATCATCTCAGATTC...CAAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCGATGTTTGTTGCTTTaGATGAATGGATTGACACCT +
Preference number: 5 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWRCLLL*MNGLTP
Trigger: AGGTGTCAATCCATTCATCAAAAGCAACAAACATCG...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAACGATGTTTGTTGCTTTaGATGAATGGATTGACACCT +
Preference number: 5 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAERCLLL*MNGLTP
Trigger: AGGTGTCAATCCATTCATCAAAAGCAACAAACATCG...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 5 (lower is better)
Translates to: ISCTDSLQGCWHSYSPAEFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...TTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAAGAGACAGCAAAACTTaGGCAACTGGGTGTACTGAA +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLERDSKT*ATGCTE
Trigger: TTCAGTACACCCAGTTGCCAAAGTTTTGCTGTCTCT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS TCA 90 bp AGCAATAATCCTAAAATGGTTGACAACATTCATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGGCCTCCGATCACTCTCTCTTATAAG +
Preference number: 5 (lower is better)
Translates to: SNNPKMVDNIHLAKK*KYKGPWPPITLSYK
Trigger: CTTATAAGAGAGAGTGATCGGAGGCCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATGAATGTTGTCAACCATTTTAGGATTATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS GCA 90 bp ATGTGGACCTTTCTTTTGATTGTGCCAACAGACTTCCAATCTAACTaGATCTGCCAAAGAGACTATCATGAACGACATAGACAGAACATA +
Preference number: 5 (lower is better)
Translates to: MWTFLLIVPTDFQSN*ICQRDYHERHRQNI
Trigger: TATGTTCTGTCTATGTCGTTCATGATAGTCTCTTTGGCAGATGCAGTTAGATTGGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTGTCATTGAGTACTaGTTCTTGATCCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLECVIEY*FLILHW
Trigger: CCAATGCAGGATCAAGAACAAGTACTCAATGACACA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTGTGTCATTGAGTACTaGTTCTTGATCCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: SLQGCWHSYSPAESWILFCVIEY*FLILHW
Trigger: CCAATGCAGGATCAAGAACAAGTACTCAATGACACA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTGTGTCATTGAGTACTaGTTCTTGATCCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYCVIEY*FLILHW
Trigger: CCAATGCAGGATCAAGAACAAGTACTCAATGACACA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGCTATCTGAAAACAGTTaGGCCTGCCAAAGAGACTAT +
Preference number: 5 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLLSENS*ACQRDY
Trigger: ATAGTCTCTTTGGCAGGCCAAACTGTTTTCAGATAG...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000456692.6
CDS-3UTR CAA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTATGAGTTTTTGCTACTaGGACACTATTCAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSMSFCY*DTIQVD
Trigger: ATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCAT...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTCCATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGATGAGTTTTTGCTACTaGGACACTATTCAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: FHVEIVQISCTDSLQGCWMSFCY*DTIQVD
Trigger: ATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCAT...CCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CAA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATCCCTTGCATGAGTTTTaGCTACTTGGACACTATTCA +
Preference number: 5 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYPLHEF*LLGHYS
Trigger: TGAATAGTGTCCAAGTAGCAAAAACTCATGCAAGGG...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAGAATCTGAGATGATATaGAACATCCGTGGATTCAGG +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEESEMI*NIRGFR
Trigger: CCTGAATCCACGGATGTTCAATATCATCTCAGATTC...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTCAAATTCCACAAGATTaGCTAAGTTCTGCACAGATT +
Preference number: 5 (lower is better)
Translates to: VEIVQISCTDSLQGCWHSQIPQD*LSSAQI
Trigger: AATCTGTGCAGAACTTAGCAAATCTTGTGGAATTTG...ACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCGATGTTTGTTGCTTTaGATGAATGGATTGACACCT +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMRCLLL*MNGLTP
Trigger: AGGTGTCAATCCATTCATCAAAAGCAACAAACATCG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTCACCATGCTACCTGACATCATaGGTTTTTGTATACTGGTTT +
Preference number: 5 (lower is better)
Translates to: VQISCTDSLQGCWHSYSPCYLTS*VFVYWF
Trigger: AAACCAGTATACAAAAACCAATGATGTCAGGTAGCA...TGGTGAATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp CATGTGGAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATTGCTACCTGACATCATaGGTTTTTGTATACTGGTTT +
Preference number: 5 (lower is better)
Translates to: HVEIVQISCTDSLQGCWHCYLTS*VFVYWF
Trigger: AAACCAGTATACAAAAACCAATGATGTCAGGTAGCA...ATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTCCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000515800.6
CDS-3UTR CAA 90 bp TTTCGTTTTGTGAAAGGTGGTCTGTACACCAAGGCTCAGAGGTTGTTAAAGATTAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: FRFVKGGLYTKAQRLLKIKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...AATCTTTAACAACCTCTGAGCCTTGGTGTACAGACCACCTTTCACAAAACGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGTTCGAGATATCAAGATACAGTCATAGCATTTCGTTTTGTGAAAGGTGGTCTGATGTGGACCTTTCTTTaGATTGTGCCAACAGACTTC +
Preference number: 5 (lower is better)
Translates to: SSRYQDTVIAFRFVKGGLMWTFL*IVPTDF
Trigger: GAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACAT...CAGACCACCTTTCACAAAACGAAATGCTATGACTGTATCTTGATATCTCGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTATAAAAGGCATCCTTaGTTTTACGACGGATGGTAT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILYKRHP*FYDGWY
Trigger: ATACCATCCGTCGTAAAACAAAGGATGCCTTTTATA...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGTATAAAAGGCATCCTTaGTTTTACGACGGATGGTAT +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMYKRHP*FYDGWY
Trigger: ATACCATCCGTCGTAAAACAAAGGATGCCTTTTATA...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGATTAATCCTTTTGGTTaGGTAGCTCGTTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMINPFG*VARFSL
Trigger: AAGCGAAAAACGAGCTACCAAACCAAAAGGATTAAT...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGATTAATCCTTTTGGTTaGGTAGCTCGTTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILINPFG*VARFSL
Trigger: AAGCGAAAAACGAGCTACCAAACCAAAAGGATTAAT...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATCCAGCAGATACAACAAGTAGTCAGAAGTTCAAAGATGGATAAGTTAGGCAGCCAAATTCCACAAGATTaGCTAAGTTCTGCACAGATT +
Preference number: 5 (lower is better)
Translates to: IQQIQQVVRSSKMDKLGSQIPQD*LSSAQI
Trigger: AATCTGTGCAGAACTTAGCAAATCTTGTGGAATTTG...GCTGCCTAACTTATCCATCTTTGAACTTCTGACTACTTGTTGTATCTGCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGCAAATTCCACAAGATTaGCTAAGTTCTGCACAGATT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILQIPQD*LSSAQI
Trigger: AATCTGTGCAGAACTTAGCAAATCTTGTGGAATTTG...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATGCAAATTCCACAAGATTaGCTAAGTTCTGCACAGATT +
Preference number: 5 (lower is better)
Translates to: IHQQNLGFCLHSSHITGMQIPQD*LSSAQI
Trigger: AATCTGTGCAGAACTTAGCAAATCTTGTGGAATTTG...CATTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAACGATGTTTGTTGCTTTaGATGAATGGATTGACACCT +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLERCLLL*MNGLTP
Trigger: AGGTGTCAATCCATTCATCAAAAGCAACAAACATCG...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GATAGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTGCTACCTGACATCATaGGTTTTTGTATACTGGTTT +
Preference number: 5 (lower is better)
Translates to: DSLQGCWHSYSPAESWILCYLTS*VFVYWF
Trigger: AAACCAGTATACAAAAACCAATGATGTCAGGTAGCA...CAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATAAAGTGTGCTATTTTTaGGCAAGAGCAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYKVCYF*ARAKET
Trigger: TGTCTCCTTTGCTCTTGCCAAAAAATAGCACACTTT...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GAAATAGTGCAAATATCCTGCACAGATAGCTTACAAGGTTGCTGGCATAGTTATTTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 5 (lower is better)
Translates to: EIVQISCTDSLQGCWHSYFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...ATAACTATGCCAGCAACCTTGTAAGCTATCTGTGCAGGATATTTGCACTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TCTGTAGTGTCCGGAAGTTCAGGTACATTCTTTAAGGGAATCGTAAAATTGCATTTCACCAGCAGAATCTaGGATTTTGTTTGCATAGCT +
Preference number: 5 (lower is better)
Translates to: SVVSGSSGTFFKGIVKLHFTSRI*DFVCIA
Trigger: AGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAA...ATGCAATTTTACGATTCCCTTAAAGAATGTACCTGAACTTCCGGACACTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS CCA 90 bp GCTGTTATAATACCGGCCTCCCATCATAAACTGATTGTTTGGCGTTaGACATATTTTAAATCGCTGAATATTTTCATTGGTCCGGAAATA +
Preference number: 5 (lower is better)
Translates to: AVIIPASHHKLIVWR*TYFKSLNIFIGPEI
Trigger: TATTTCCGGACCAATGAAAATATTCAGCGATTTAAAATATGTCCAACGCCAAACAATCAGTTTATGATGGGAGGCCGGTATTATAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp GAACAGTCTGCAATCCAGTTATACACAATTGTCAATAAGAATGTGTTTCTTGTCTGTGTCATTGAGTACTaGTTCTTGATCCTGCATTGG +
Preference number: 5 (lower is better)
Translates to: EQSAIQLYTIVNKNVFLVCVIEY*FLILHW
Trigger: CCAATGCAGGATCAAGAACAAGTACTCAATGACACA...GACAAGAAACACATTCTTATTGACAATTGTGTATAACTGGATTGCAGACTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAATATAAAAGGCATCCTTaGTTTTACGACGGATGGTAT +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEYKRHP*FYDGWY
Trigger: ATACCATCCGTCGTAAAACAAAGGATGCCTTTTATA...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTATTAATCCTTTTGGTTaGGTAGCTCGTTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: SLQGCWHSYSPAESWILFINPFG*VARFSL
Trigger: AAGCGAAAAACGAGCTACCAAACCAAAAGGATTAAT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTATGAGTTTTTGCTACTaGGACACTATTCAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: SLQGCWHSYSPAESWILFMSFCY*DTIQVD
Trigger: ATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCAT...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp TTATTCACCAGCAGAATCTTGGATTTTGTTTGCATAGCTCACACATCACTGGAAATGAGTTTTTGCTACTaGGACACTATTCAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: LFTSRILDFVCIAHTSLEMSFCY*DTIQVD
Trigger: ATCTACCTGAATAGTGTCCAAGTAGCAAAAACTCAT...TTCCAGTGATGTGTGAGCTATGCAAACAAAATCCAAGATTCTGCTGGTGAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp ACAATCTTCAACTTGTGCTTCAAGGATCTGATCCTTCTTTTTACTCTGGCAATTCGATGTTTGTTGCTTTaGATGAATGGATTGACACCT +
Preference number: 5 (lower is better)
Translates to: TIFNLCFKDLILLFTLAIRCLLL*MNGLTP
Trigger: AGGTGTCAATCCATTCATCAAAAGCAACAAACATCG...AATTGCCAGAGTAAAAAGAAGGATCAGATCCTTGAAGCACAAGTTGAAGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp AGCTTACAAGGTTGCTGGCATAGTTATTCACCAGCAGAATCTTGGATTTTGTTTTGCTACCTGACATCATaGGTTTTTGTATACTGGTTT +
Preference number: 5 (lower is better)
Translates to: SLQGCWHSYSPAESWILFCYLTS*VFVYWF
Trigger: AAACCAGTATACAAAAACCAATGATGTCAGGTAGCA...AAACAAAATCCAAGATTCTGCTGGTGAATAACTATGCCAGCAACCTTGTAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS CCA 90 bp TGCAGACTTGACCAACTGTCATTAGTAAATTATAAGCTTCCTGTTTaGAAATCTTCCCATGGAACCATATTTTTCCTTCATGTGGATCTT +
Preference number: 5 (lower is better)
Translates to: CRLDQLSLVNYKLPV*KSSHGTIFFLHVDL
Trigger: AAGATCCACATGAAGGAAAAATATGGTTCCATGGGAAGATTTCCAAACAGGAAGCTTATAATTTACTAATGACAGTTGGTCAAGTCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6
CDS-3UTR CAA 90 bp CTTCCATGCTTATTTCTCTGTCATTTAGTGTGCATAACAACAACGATTCAAGCTATTAATCCTTTTGGTTaGGTAGCTCGTTTTTCGCTT +
Preference number: 5 (lower is better)
Translates to: LPCLFLCHLVCITTTIQAINPFG*VARFSL
Trigger: AAGCGAAAAACGAGCTACCAAACCAAAAGGATTAAT...AGCTTGAATCGTTGTTGTTATGCACACTAAATGACAGAGAAATAAGCATGGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS-3UTR CAA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATATATAAAAGGCATCCTTaGTTTTACGACGGATGGTAT +
Preference number: 5 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSIYKRHP*FYDGWY
Trigger: ATACCATCCGTCGTAAAACAAAGGATGCCTTTTATA...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS-3UTR CAA 90 bp GGAAGTAGTTACAGTAAGAACAGTCTGCAATCCAGTTATACACAATTGTCAATATGCTACCTGACATCATaGGTTTTTGTATACTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSSYSKNSLQSSYTQLSICYLTS*VFVYWF
Trigger: AAACCAGTATACAAAAACCAATGATGTCAGGTAGCA...TATTGACAATTGTGTATAACTGGATTGCAGACTGTTCTTACTGTAACTACTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000515800.6
CDS GCA 72 bp GCCTCGGCCGCCATCATGTTGAAGCCCGCTCTACTCTaGCCTACCCTGCCCGCCCGGGAGCCCCAGGGGCCA +
Preference number: 6 (lower is better)
Translates to: ASAAIMLKPALL*PTLPAREPQGP
Trigger: TGGCCCCTGGGGCTCCCGGGCGGGCAGGGTAGGGCAGAGTAGAGCGGGCTTCAACATGATGGCGGCCGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 72 bp CACAGGCAGGGCCGCGGGTATCTTCACCCGACACACTaGGGGATAGGCACTGGAGCCCGCTGCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: HRQGRGYLHPTH*GIGTGARCRAA
Trigger: GGCGGCGCGGCAGCGGGCTCCAGTGCCTATCCCGCAGTGTGTCGGGTGAAGATACCCGCGGCCCTGCCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 72 bp CACTCCGGTCTCCACCAGCCCAGGATAGGGGGCGGCTaGCACAGGCAGGGCCGCGGGTATCTTCACCCGACA +
Preference number: 6 (lower is better)
Translates to: HSGLHQPRIGGG*HRQGRGYLHPT
Trigger: TGTCGGGTGAAGATACCCGCGGCCCTGCCTGTGGCAGCCGCCCCCTATCCTGGGCTGGTGGAGACCGGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS CAA 90 bp CCGCCGCCTGGCCCGAGAGTCTCAGCAAGCAACGAAGTGGGCAGTTaGGTGAGAGCCATGTCTCCACTAGGTCCAGCAACAGCAGCACCG +
Preference number: 6 (lower is better)
Translates to: PPPGPRVSASNEVGS*VRAMSPLGPATAAP
Trigger: CGGTGCTGCTGTTGCTGGACCTAGTGGAGACATGGCTCTCACCAAACTGCCCACTTCGTTGCTTGCTGAGACTCTCGGGCCAGGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 72 bp ACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACCC +
Preference number: 6 (lower is better)
Translates to: TARLPCLPEAFF*YRSVKFSVIPP
Trigger: GGGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS GCA 72 bp ACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACTG +
Preference number: 6 (lower is better)
Translates to: TARLPCLPEAFF*YRSVKFSVIPL
Trigger: CAGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274376.11
ENST00000515800.6
CDS GCA 72 bp ACTGCCAGACTTCCCTGCCTGCCTGAGGCGTTCTTCTaGTATCGTTCTGTCAAGTTTTCCGTGATACCACCT +
Preference number: 6 (lower is better)
Translates to: TARLPCLPEAFF*YRSVKFSVIPP
Trigger: AGGTGGTATCACGGAAAACTTGACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506290.1
ENST00000512763.5
CDS GCA 72 bp ATCACTCTCTCTTATAAGATAACTGCCAGACTTCCCTaGCTGCCTGAGGCGTTCTTCTGCTATCGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: ITLSYKITARLP*LPEAFFCYRSV
Trigger: GACAGAACGATAGCAGAAGAACGCCTCAGGCAGGCAGGGAAGTCTGGCAGTTATCTTATAAGAGAGAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS GCA 72 bp AATGCTGCTAAATCACGGGACAGGTCCGTTCTAGAATaGTCTGTAGTGTCCGGAAGTTCAGGTACATTCCCA +
Preference number: 6 (lower is better)
Translates to: NAAKSRDRSVLE*SVVSGSSGTFP
Trigger: TGGGAATGTACCTGAACTTCCGGACACTACAGAGCATTCTAGAACGGACCTGTCCCGTGATTTAGCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS CCA 72 bp AAATTCCTGAACAGCAGTCTTAACTTACTGGTTAGTTaGAGGAGCGGTCAACGGTATGGCCACCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: KFLNSSLNLLVS*RSGQRYGHLFL
Trigger: GAGGAAGAGGTGGCCATACCGTTGACCGCTCCTCCAACTAACCAGTAAGTTAAGACTGCTGTTCAGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS CCA 72 bp TTCCGTGATACCACCCCTTCATTTCCACTTCTTTTCTaGAGCCAGCTTCCCAAATTCCTGAACAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: FRDTTPSFPLLF*SQLPKFLNSSL
Trigger: AAGACTGCTGTTCAGGAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAATGAAGGGGTGGTATCACGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456692.6
CDS CCA 72 bp AAGGCACATGGAACCCCTTCATTTCCACTTCTTTTCTaGAGCCAGCTTCCCAAATTCCTGAACAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: KAHGTPSFPLLF*SQLPKFLNSSL
Trigger: AAGACTGCTGTTCAGGAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAAATGAAGGGGTTCCATGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506290.1
CDS TCA 72 bp CCTAAAATGGTTGACAACATTCATCTGGCTAAGAAATaGAAGTACAAAGGACCCTGGCCTCCGATCACTCTC +
Preference number: 6 (lower is better)
Translates to: PKMVDNIHLAKK*KYKGPWPPITL
Trigger: GAGAGTGATCGGAGGCCAGGGTCCTTTGTACTTTCATTTCTTAGCCAGATGAATGTTGTCAACCATTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
ENST00000515800.6
CDS TCA 72 bp TTCCACTTCTTTTCTGGAGCCAGCTTCCCAAATTCCTaGACAGCAGTCTTAACTTACTGGTTAGTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: FHFFSGASFPNS*TAVLTYWLVGG
Trigger: TCCTCCAACTAACCAGTAAGTTAAGACTGCTGTTCAGGAATTTGGGAAGCTGGCTCCAGAAAAGAAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456692.6
ENST00000506290.1
ENST00000512763.5
CDS TCA 72 bp ATCCTTCAACAATCTGTTCTTTTCGATAGTGATCTATaGTGTCCCCAATGCTGTTATAATACCGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: ILQQSVLFDSDL*CPQCCYNTGLP
Trigger: TGGGAGGCCGGTATTATAACAGCATTGGGGACATCATAGATCACTATCGAAAAGAACAGATTGTTGAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6
CDS GCA 72 bp CGCCAGGAGTATTATCTGAGGGCCTCACAAGAAAACTaGAGACTTGACCAACTGTCATTAGTAAATTATAAG +
Preference number: 6 (lower is better)
Translates to: RQEYYLRASQEN*RLDQLSLVNYK
Trigger: CTTATAATTTACTAATGACAGTTGGTCAAGTCTGCAGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6
CDS GCA 72 bp TTGATTGTGCCAACAGACTTCCAATCTAACTGCATCTaGCAAAGAGACTATCATGAACGACATAGACAGAAC +
Preference number: 6 (lower is better)
Translates to: LIVPTDFQSNCI*QRDYHERHRQN
Trigger: GTTCTGTCTATGTCGTTCATGATAGTCTCTTTGGCAGATGCAGTTAGATTGGAAGTCTGTTGGCACAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS TCA 72 bp TGGTATTATAGATTTCCTTGCCATCCACTGTGTCATTaGGTACTTGTTCTTGATCCTGCATTGGTACAGGTT +
Preference number: 6 (lower is better)
Translates to: WYYRFPCHPLCH*VLVLDPALVQV
Trigger: AACCTGTACCAATGCAGGATCAAGAACAAGTACTCAATGACACAGTGGATGGCAAGGAAATCTATAATACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6
CDS CAA 90 bp GCAATTCTTTCTCTTTTACCATCAAGTGTAATGTGGACCTTTCTTTaGATTGTGCCAACAGACTTCCAATCTAACTGCATCTGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: AILSLLPSSVMWTFL*IVPTDFQSNCICQR
Trigger: TCTTTGGCAGATGCAGTTAGATTGGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACATTACACTTGATGGTAAAAGAGAAAGAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS GCA 72 bp TTTCTTTTGATTGTGCCAACAGACTTCCAATCTAACTaGATCTGCCAAAGAGACTATCATGAACGACATAGA +
Preference number: 6 (lower is better)
Translates to: FLLIVPTDFQSN*ICQRDYHERHR
Trigger: TCTATGTCGTTCATGATAGTCTCTTTGGCAGATGCAGTTAGATTGGAAGTCTGTTGGCACAATCAAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS CAA 72 bp TCTCTTTTACCATCAAGTGTAATGTGGACCTTTCTTTaGATTGTGCCAACAGACTTCCAATCTAACTGCATC +
Preference number: 6 (lower is better)
Translates to: SLLPSSVMWTFL*IVPTDFQSNCI
Trigger: GATGCAGTTAGATTGGAAGTCTGTTGGCACAATCAAAAGAAAGGTCCACATTACACTTGATGGTAAAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515800.6
CDS CCA 72 bp ATACCGGCCTCCCATCATAAACTGATTGTTTGGCGTTaGACATATTTTAAATCGCTGAATATTTTCATTGGT +
Preference number: 6 (lower is better)
Translates to: IPASHHKLIVWR*TYFKSLNIFIG
Trigger: ACCAATGAAAATATTCAGCGATTTAAAATATGTCCAACGCCAAACAATCAGTTTATGATGGGAGGCCGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000274376.11
ENST00000456692.6
ENST00000506290.1
ENST00000509953.1
ENST00000512763.5
ENST00000515800.6