Pregenerated sensors for RARS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000113643Ensembl transcript IDs: ENST00000518757.5, ENST00000519346.1, ENST00000520013.5, ENST00000521329.5, ENST00000521939.5, ENST00000522834.5, ENST00000626454.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAAGTCAACTATAACCTTTTTATTCTCTCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAA | + |
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Preference number: 1 (lower is better) Translates to: EKSTITFLFSPRAGS*TPFTRRLVNCSDTK Trigger: TTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAGAGAATAAAAAGGTTATAGTTGACTTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTACTACATGATTTAACCTaGGCACGTCATACCCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SPSPRRSMRRTVSPERVLLHDLT*ARHTLQ Trigger: TTGCAGGGTATGACGTGCTCAGGTTAAATCATGTAG...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTAATAGTTGACCTCAGGTaGCCTACATGCATCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SPSPRRSMRRTVSPERVLIVDLR*PTCISL Trigger: TAAAGAGATGCATGTAGGCCACCTGAGGTCAACTAT...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTACAAATACAATCTTTCTaGCATCATCCACCTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: SPSPRRSMRRTVSPERVLQIQSF*HHPPAQ Trigger: TTGTGCAGGTGGATGATGGCAGAAAGATTGTATTTG...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR TCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGACCCCAGTCTCCTACATaGTTTAACCTGAGCACGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQISFQAFVISGFLPWSRPQSPT*FNLSTS Trigger: TGACGTGCTCAGGTTAAATCATGTAGGAGACTGGGG...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR TCA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGTTGTTCCTTTCTGCCTaGAGACTCTTTCGAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: YYTDSPQTWPADLVSLAELFLSA*RLFRRI Trigger: TATTCTTCGAAAGAGTCTTCAGGCAGAAAGGAACAA...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAACCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: EQVVELHSLEDWSIVLIQPRAGS*TPFTRR Trigger: TCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGG...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTACATTCACTAGAAGACTaGTCAATTGTTCTGATACAA | + |
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Preference number: 2 (lower is better) Translates to: SPSPRRSMRRTVSPERVLHSLED*SIVLIQ Trigger: TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATG...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR CCA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGAGGATTTTCCAAATCTaGATATGCAGCCTTAATTGC | + |
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Preference number: 2 (lower is better) Translates to: YYTDSPQTWPADLVSLAERIFQI*ICSLNC Trigger: GCAATTAAGGCTGCATATCCAGATTTGGAAAATCCT...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| 3UTR-3UTR GCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGACTCAGGTGGCCTACATaGATCTCTTTAGCTATATTA | + |
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Preference number: 2 (lower is better) Translates to: SQISFQAFVISGFLPWSRLRWPT*ISLAIL Trigger: TAATATAGCTAAAGAGATGCATGTAGGCCACCTGAG...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATAATACATTCATTGTCTaGGAGGTGTTTGGTAATGTT | + |
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Preference number: 2 (lower is better) Translates to: QVVELHSLEDWSIVLIQNNTFIV*EVFGNV Trigger: AACATTACCAAACACCTCCCAGACAATGAATGTATT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGGTGCCAATGGCCACTTaGGTAAAAACACACAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: LPEQVVELHSLEDWSIVLVPMAT*VKTHSV Trigger: AACACTGTGTGTTTTTACCAAAGTGGCCATTGGCAC...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR CAA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAATCTGGAAATTTGTCTaGCAGGTGAGCGATGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SQISFQAFVISGFLPWSRIWKFV*QVSDEH Trigger: ATGCTCATCGCTCACCTGCAAGACAAATTTCCAGAT...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAATTTTCAATACATTCATaGTCTGGGAGGTGTTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: EQVVELHSLEDWSIVLIQFSIHS*SGRCLV Trigger: TACCAAACACCTCCCAGACAATGAATGTATTGAAAA...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| 3UTR TCA 72 bp | ACTATAACCTTTTTATTCTCTCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGACTGGTCAATTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: TITFLFSPRAGS*TPFTRRLVNCS Trigger: AGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAGAGAATAAAAAGGTTATAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR GCA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGGACAGAGCGAGACTCTaGTGCAGCAGCCGCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: YYTDSPQTWPADLVSLAEDRARL*CSSRAE Trigger: CTCCGCGCGGCTGCTGCAGCAGAGTCTCGCTCTGTC...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR GCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTAATCTCTTCTTCCTGCTaGAGCAGCCGCGCGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLISSSC*SSRAEH Trigger: GTGCTCCGCGCGGCTGCTGCAGCAGGAAGAAGAGAT...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | GTAACTGCTCCAAATTTGGAGAAGCTCCTAAACAGCCACAGTTTTTCAACCGGTAGAGCGAGACTCTGCTaGAGCAGCCGCGCGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: VTAPNLEKLLNSHSFSTGRARLC*SSRAEH Trigger: GTGCTCCGCGCGGCTGCTGCAGCAGAGTCTCGCTCT...ACCGGTTGAAAAACTGTGGCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGCCAAACTTGGCCTGCTaGCTTGGTGTCACTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: YYTDSPQTWPADLVSLAEPNLAC*LGVTSR Trigger: TCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGG...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | CATCTGAGAAATACCCATAGCACTATTACACTGATAGTCCCCAAACTTGGCCTGGCACTCCAGTCTGCTTaGCAGAGCGAGACTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLRNTHSTITLIVPKLGLALQSA*QSETLL Trigger: CAGCAGAGTCTCGCTCTGTCAAGCAGACTGGAGTGC...CAGGCCAAGTTTGGGGACTATCAGTGTAATAGTGCTATGGGTATTTCTCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | TGTAACTGCTCCAAATTTGGAGAAGCTCCTAAACAGCCACAGTTTTTCAACCGGCTGAATCCCAGAGGCTaGGGTTGCGGTGAGTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: CNCSKFGEAPKQPQFFNRLNPRG*GCGESR Trigger: TCTCGACTCACCGCAACCTCAGCCTCTGGGATTCAG...CCGGTTGAAAAACTGTGGCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTAAATTTGTCTTGCAGGTaGGCGATGAGCATGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLNLSCR*AMSMPN Trigger: GTTTGGCATGCTCATCGCTCACCTGCAAGACAAATT...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTACAGGGAACCGTAAAATaGACCGGCCTAGTTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLQGTVK*TGLVSI Trigger: AATGGAAACTAGGCCGGTGCATTTTACGGTTCCCTG...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | CATCTGAGAAATACCCATAGCACTATTACACTGATAGTCCCCAAACTTGGCCTGTCGAGATCGTGCCACTaGACTCCAGTCTGCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: HLRNTHSTITLIVPKLGLSRSCH*TPVCLT Trigger: TGTCAAGCAGACTGGAGTGCAGTGGCACGATCTCGA...CAGGCCAAGTTTGGGGACTATCAGTGTAATAGTGCTATGGGTATTTCTCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR CCA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGGATAGTCCCCAAACTTaGCCTGCTGACTTGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LPEQVVELHSLEDWSIVLDSPQT*PADLVS Trigger: TGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATC...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTATTGTTCCTTTCTGCCTaGAGACTCTTTCGAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLLFLSA*RLFRRI Trigger: TATTCTTCGAAAGAGTCTTCAGGCAGAAAGGAACAA...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CATCTGAGAAATACCCATAGCACTATTACACTGATAGTCCCCAAACTTGGCCTGGCAGCCTTAATTGCATaGCCAAAGACCTCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: HLRNTHSTITLIVPKLGLAALIA*PKTSCR Trigger: CCTACAAGAGGTCTTTGGTCATGCAATTAAGGCTGC...CAGGCCAAGTTTGGGGACTATCAGTGTAATAGTGCTATGGGTATTTCTCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGTCTGTTCCTTGGTTTTaGGCATCTGAGAAATACCCA | + |
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Preference number: 4 (lower is better) Translates to: YYTDSPQTWPADLVSLAESVPWF*ASEKYP Trigger: TGGGTATTTCTCAGATGCTCAAAACCAAGGAACAGA...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCTCCCAGAAGATCCATaGGGCGCACTGTTTCACCCG | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNLPEDP*GALFHP Trigger: CGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | TCAATACATTCATTGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATTTCTCTTATCTCTTCTTCCTGCTaGAGCAGCCGCGCGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SIHSLSGRCLVMFSAISLISSSC*SSRAEH Trigger: GTGCTCCGCGCGGCTGCTGCAGCAGGAAGAAGAGAT...AAGAGAAATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR GCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTAATATGCAGCCTTAATTaGATGACCAAAGACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLICSLN*MTKDLL Trigger: CAAGAGGTCTTTGGTCATGCAATTAAGGCTGCATAT...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CCA 90 bp | GCTCCAAATTTGGAGAAGCTCCTAAACAGCCACAGTTTTTCAACCGGTCAATTTGATAGTCCCCAAACTTaGCCTGCTGACTTGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: APNLEKLLNSHSFSTGQFDSPQT*PADLVS Trigger: TGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATC...AAATTGACCGGTTGAAAAACTGTGGCTGTTTAGGAGCTTCTCCAAATTTGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR CCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAATGAGCATGCCAAACTaGGTCCCCCAGTCTCCTACA | + |
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Preference number: 4 (lower is better) Translates to: SQISFQAFVISGFLPWSRMSMPN*VPQSPT Trigger: TGTAGGAGACTGGGGGACCCAGTTTGGCATGCTCAT...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| 3UTR CAA 72 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTaGGTGTCACTAGCAGAGGAGGATTTTCCAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: YYTDSPQTWPAD*VSLAEEDFPNL Trigger: CAGATTTGGAAAATCCTCCTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTCCCAGAAGATCCATGAGGCGCACTGTTTCACCCGAACGTGTTTTATTCCATTCCTTCTCATaGTCCAAAAGAATCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SPSPRRSMRRTVSPERVLFHSFS*SKRILV Trigger: AACCAAGATTCTTTTGGATCATGAGAAGGAATGGAA...TAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCTGGGAGAAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATTTAATCTCTTCTTCCTaGTGCAGCAGCCGCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNLISSS*CSSRAE Trigger: CTCCGCGCGGCTGCTGCAGCAGGAAGAAGAGATTAA...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR TCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAGCAGCCTTAATTGCATaGCCAAAGACCTCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SQISFQAFVISGFLPWSRAALIA*PKTSCR Trigger: CCTACAAGAGGTCTTTGGTCATGCAATTAAGGCTGC...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCCAAACTTGGCCTGCTaGCTTGGTGTCACTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNPNLAC*LGVTSR Trigger: TCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAAAAGGTCAGCATATTTaGTGCAGCCATACGCAACGG | + |
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Preference number: 4 (lower is better) Translates to: SQISFQAFVISGFLPWSRKGQHI*CSHTQR Trigger: CCGTTGCGTATGGCTGCATCAAATATGCTGACCTTT...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CATCTGAGAAATACCCATAGCACTATTACACTGATAGTCCCCAAACTTGGCCTGTTGTTCCTTTCTGCCTaGAGACTCTTTCGAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: HLRNTHSTITLIVPKLGLLFLSA*RLFRRI Trigger: TATTCTTCGAAAGAGTCTTCAGGCAGAAAGGAACAA...CAGGCCAAGTTTGGGGACTATCAGTGTAATAGTGCTATGGGTATTTCTCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCCCCAGTCTCCTACATaGTTTAACCTGAGCACGTCA | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNPQSPT*FNLSTS Trigger: TGACGTGCTCAGGTTAAATCATGTAGGAGACTGGGG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | CATCTGAGAAATACCCATAGCACTATTACACTGATAGTCCCCAAACTTGGCCTGATATGCAGCCTTAATTaGATGACCAAAGACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLRNTHSTITLIVPKLGLICSLN*MTKDLL Trigger: CAAGAGGTCTTTGGTCATGCAATTAAGGCTGCATAT...CAGGCCAAGTTTGGGGACTATCAGTGTAATAGTGCTATGGGTATTTCTCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR CCA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGAGGATTTTCCAAATCTaGATATGCAGCCTTAATTGC | + |
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Preference number: 4 (lower is better) Translates to: LPEQVVELHSLEDWSIVLRIFQI*ICSLNC Trigger: GCAATTAAGGCTGCATATCCAGATTTGGAAAATCCT...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| 3UTR CAA 72 bp | ATGATCCAAAAGAATCTTGGTTTCTCGAGCAGCTTTTaGGAGCATTTCTTCATCAATATTGGCCAGACGTGC | + |
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Preference number: 4 (lower is better) Translates to: MIQKNLGFSSSF*EHFFINIGQTC Trigger: GCACGTCTGGCCAATATTGATGAAGAAATGCTCCAAAAAGCTGCTCGAGAAACCAAGATTCTTTTGGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNPRAGS*TPFTRR Trigger: TCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR CCA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGCATTCACTAGAAGACTaGTCAATTGTTCTGATACAA | + |
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Preference number: 4 (lower is better) Translates to: LPEQVVELHSLEDWSIVLHSLED*SIVLIQ Trigger: TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATG...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR CCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGACCTTCAACTTGTCCATaGATCGTTTTAGTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SQISFQAFVISGFLPWSRPSTCP*IVLVLL Trigger: GAGAAGGACTAAAACGATCCATGGACAAGTTGAAGG...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAATTGTTCCTTTCTGCCTaGAGACTCTTTCGAAGAATA | + |
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Preference number: 4 (lower is better) Translates to: EQVVELHSLEDWSIVLIQLFLSA*RLFRRI Trigger: TATTCTTCGAAAGAGTCTTCAGGCAGAAAGGAACAA...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR TCA 90 bp | TCAATACATTCATTGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATTTCTCTTCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SIHSLSGRCLVMFSAISLPRAGS*TPFTRR Trigger: TCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGG...AAGAGAAATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCTACATGATTTAACCTaGGCACGTCATACCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNLHDLT*ARHTLQ Trigger: TTGCAGGGTATGACGTGCTCAGGTTAAATCATGTAG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATTCTGTTCCTTGGTTTTaGGCATTTGGTGTCACTAGC | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNSVPWF*AFGVTS Trigger: GCTAGTGACACCAAATGCTCAAAACCAAGGAACAGA...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR GCA 90 bp | GTAACTGCTCCAAATTTGGAGAAGCTCCTAAACAGCCACAGTTTTTCAACCGGTTTTTCTTCTTGTAACTaGTCCAAATTTGGAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTAPNLEKLLNSHSFSTGFSSCN*SKFGEA Trigger: AGCTTCTCCAAATTTGGAGCAGTTACAAGAAGAAAA...ACCGGTTGAAAAACTGTGGCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAACAAATACAATCTTTCTaGCATCATCCACCTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: EQVVELHSLEDWSIVLIQQIQSF*HHPPAQ Trigger: TTGTGCAGGTGGATGATGGCAGAAAGATTGTATTTG...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CCA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAAGCTTTTGTAATATCTaGGTTTTTACCCTGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQISFQAFVISGFLPWSRSFCNI*VFTLEQ Trigger: CTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCT...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATATAGTTGACCTCAGGTaGCCTACATGCATCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNIVDLR*PTCISL Trigger: TAAAGAGATGCATGTAGGCCACCTGAGGTCAACTAT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR TCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATAGCAGAACTACACACTaGTATGCTCGCTTCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNSRTTH*YARFLN Trigger: ATTTAAGAAGCGAGCATATCAGTGTGTAGTTCTGCT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | AATACATTCATTGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATTTCTCTTGGATATGCAGCCTTAATTaGATGACCAAAGACCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NTFIVWEVFGNVFSNFSWICSLN*MTKDLL Trigger: CAAGAGGTCTTTGGTCATGCAATTAAGGCTGCATAT...CCAAGAGAAATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR GCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATCTCAGGTGGCCTACATaGATCTCTTTAGCTATATTA | + |
|
Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNLRWPT*ISLAIL Trigger: TAATATAGCTAAAGAGATGCATGTAGGCCACCTGAG...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR GCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATAATATTGGCCAGACGTaGAATAGACCTGATTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNNIGQT*NRPDSS Trigger: ACTAGAATCAGGTCTATTGCACGTCTGGCCAATATT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATACATTCATTGTCTaGGAGGTGTTTGGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQVVELHSLEDWSIVLIQNTFIV*EVFGNV Trigger: AACATTACCAAACACCTCCCAGACAATGAATGTATT...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| 3UTR CAA 72 bp | CCAGGACCAGCAATTTCAACTTTTTCAATACATTCATaGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PGPAISTFSIHS*SGRCLVMFSAI Trigger: AATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATTGAAAAAGTTGAAATTGCTGGTCCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR CCA 90 bp | AATACATTCATTGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATTTCTCTTGGAGGATTTTCCAAATCTaGATATGCAGCCTTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTFIVWEVFGNVFSNFSWRIFQI*ICSLNC Trigger: GCAATTAAGGCTGCATATCCAGATTTGGAAAATCCT...CCAAGAGAAATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR GCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATTTTTCTTCTTGTAACTaGTCCAAATTTGGAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNFSSCN*SKFGEA Trigger: AGCTTCTCCAAATTTGGAGCAGTTACAAGAAGAAAA...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR CCA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATATTTTATTTAACTCTTaGCGGGAGACATCACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QVVELHSLEDWSIVLIQNILFNS*RETSQI Trigger: TATCTGTGATGTCTCCCGCCAAGAGTTAAATAAAAT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CCA 90 bp | TCAATACATTCATTGTCTGGGAGGTGTTTGGTAATGTTTTCAGCAATTTCTCTTCATTCACTAGAAGACTaGTCAATTGTTCTGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SIHSLSGRCLVMFSAISLHSLED*SIVLIQ Trigger: TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATG...AAGAGAAATTGCTGAAAACATTACCAAACACCTCCCAGACAATGAATGTATTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR CAA 90 bp | TATTACACTGATAGTCCCCAAACTTGGCCTGCTGACTTGGTGTCACTAGCAGAGACTTGGCCTGCTGACTaGGTGTCACTAGCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YYTDSPQTWPADLVSLAETWPAD*VSLAEE Trigger: CTCCTCTGCTAGTGACACCAAGTCAGCAGGCCAAGT...CTCTGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTATCAGTGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR CAA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGAGGATATCAAACCCCTaGGCCATGACAGCAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LPEQVVELHSLEDWSIVLRISNP*AMTAAT Trigger: AGTAGCTGCTGTCATGGCCAAGGGGTTTGATATCCT...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGCTTGGTTTTGAGCATTaGGTGTCACTAGCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPEQVVELHSLEDWSIVLLGFEH*VSLAEE Trigger: CTCCTCTGCTAGTGACACCAAATGCTCAAAACCAAG...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR CAA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGGTAACTGCTCCAAATTaGGAGAAGCTCCTAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPEQVVELHSLEDWSIVLVTAPN*EKLLNS Trigger: GCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTAC...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520013.5 ENST00000522834.5 |
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| CDS-3UTR CAA 90 bp | TGTAACTGCTCCAAATTTGGAGAAGCTCCTAAACAGCCACAGTTTTTCAACCGGGTAACTGCTCCAAATTaGGAGAAGCTCCTAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: CNCSKFGEAPKQPQFFNRVTAPN*EKLLNS Trigger: GCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTAC...CCGGTTGAAAAACTGTGGCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521329.5 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATACTTGGCCTGCTGACTaGGTGTCACTAGCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVVELHSLEDWSIVLIQNTWPAD*VSLAEE Trigger: CTCCTCTGCTAGTGACACCAAGTCAGCAGGCCAAGT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | CTCCCAGAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGTCTGCAGTTAAGACCTaGTCTCTTTCTTTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPEQVVELHSLEDWSIVLSAVKT*SLSFSF Trigger: GAAGGAAAAAGAAAGAGACAAGGTCTTAACTGCAGA...CAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAGAAAGGTCAGCATATTaGATGCAGCCATACGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: EQVVELHSLEDWSIVLIQERSAY*MQPYAT Trigger: CGTTGCGTATGGCTGCATCAAATATGCTGACCTTTC...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGAGTAACTGCTCCAAATTaGGAGAAGCTCCTAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQISFQAFVISGFLPWSRVTAPN*EKLLNS Trigger: GCTGTTTAGGAGCTTCTCCAAATTTGGAGCAGTTAC...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAATCTGGAAATTTGTCTaGCAGGTGAGCGATGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EQVVELHSLEDWSIVLIQIWKFV*QVSDEH Trigger: ATGCTCATCGCTCACCTGCAAGACAAATTTCCAGAT...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAACTGGAAGTGCACAGATaGTCCATTGTCCACAACATA | + |
|
Preference number: 5 (lower is better) Translates to: EQVVELHSLEDWSIVLIQLEVHR*SIVHNI Trigger: TATGTTGTGGACAATGGACAATCTGTGCACTTCCAG...TTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | TCACAGATAAGCTTCCAAGCTTTTGTAATATCTGGGTTTTTACCCTGGAGCAGATTCTCGAGCAGCTTTTaGGAGCATTTCTTCATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQISFQAFVISGFLPWSRFSSSF*EHFFIN Trigger: ATTGATGAAGAAATGCTCCAAAAAGCTGCTCGAGAA...TCTGCTCCAGGGTAAAAACCCAGATATTACAAAAGCTTGGAAGCTTATCTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATGTGCCAATGGCCACTTaGGTAAAAACACACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVVELHSLEDWSIVLIQNVPMAT*VKTHSV Trigger: AACACTGTGTGTTTTTACCAAAGTGGCCATTGGCAC...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS TCA 90 bp | GAAGAGTGTACATATACCTTTTTATTCTCTCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EECTYTFLFSPRAGS*TPFTRRLVNCSDTK Trigger: TTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAGAGAATAAAAAGGTATATGTACACTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000519346.1 ENST00000521939.5 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATATTTCTTCATCAATATaGGCCAGACGTGCAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QVVELHSLEDWSIVLIQNISSSI*ARRAID Trigger: GTCTATTGCACGTCTGGCCAATATTGATGAAGAAAT...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520013.5 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATTTTTCAATACATTCATaGTCTGGGAGGTGTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVVELHSLEDWSIVLIQNFSIHS*SGRCLV Trigger: TACCAAACACCTCCCAGACAATGAATGTATTGAAAA...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS-3UTR CAA 90 bp | CAGGTAGTTGAACTCCATTCACTAGAAGACTGGTCAATTGTTCTGATACAAAATTTAACTTTCTGTTCCTaGGTTTTGAGCATTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QVVELHSLEDWSIVLIQNLTFCS*VLSIWC Trigger: ACACCAAATGCTCAAAACCAAGGAACAGAAAGTTAA...ATTTTGTATCAGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522834.5 |
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| CDS TCA 72 bp | GGAGAATTGCCTGAATCCCAGAGGCTGAGGTTGCGGTaGGTCGAGATCGTGCCACTGCACTCCAGTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GELPESQRLRLR*VEIVPLHSSLL Trigger: AAGCAGACTGGAGTGCAGTGGCACGATCTCGACTCACCGCAACCTCAGCCTCTGGGATTCAGGCAATTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000521329.5 ENST00000626454.1 |
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| CDS TCA 72 bp | TTGTTTCTTCAACTGGTCTGCAAACTCCACAAGAGATaGAAACTATGTCTGTTACATTCAGCTCTGCATACT | + |
|
Preference number: 6 (lower is better) Translates to: LFLQLVCKLHKR*KLCLLHSALHT Trigger: AGTATGCAGAGCTGAATGTAACAGACATAGTTTTCATCTCTTGTGGAGTTTGCAGACCAGTTGAAGAAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518757.5 |
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| CDS TCA 72 bp | ACATATACCTTTTTATTCTCTCCCAGAGCAGGTAGTTaGACTCCATTCACTAGAAGACTGGTCAATTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TYTFLFSPRAGS*TPFTRRLVNCS Trigger: AGAACAATTGACCAGTCTTCTAGTGAATGGAGTTCAACTACCTGCTCTGGGAGAGAATAAAAAGGTATATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000519346.1 ENST00000521939.5 |
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| CDS CCA 72 bp | TTTAGTAATATCTGTTTACTTGGTTGTTTCTTCAACTaGTCTGCAAACTCCACAAGAGATGAAAACTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSNICLLGCFFN*SANSTRDENYV Trigger: GACATAGTTTTCATCTCTTGTGGAGTTTGCAGACCAGTTGAAGAAACAACCAAGTAAACAGATATTACTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518757.5 |
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