RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RARRES2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106538

Ensembl transcript IDs: ENST00000223271.8, ENST00000466675.5, ENST00000467793.5, ENST00000478771.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCGTGGGAATGCGCTGGTCTCCTGGGGTACGACCCTCCCCGCTCCTaGCCGGGCCATGCTACTCACCGTGTCCACGGCGCTCTCCACACT +
Preference number: 5 (lower is better)
Translates to: SWECAGLLGYDPPRS*PGHATHRVHGALHT
Trigger: AGTGTGGAGAGCGCCGTGGACACGGTGAGTAGCATGGCCCGGGCAGGAGCGGGGAGGGTCGTACCCCAGGAGACCAGCGCATTCCCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS TCA 90 bp AGGGCTGCGGACAGACAGGCAGGCAGAGGATGGCCGGTAGCCAGCTaGGGGTGCAGAGCAAGCCCTGGTGTGATCCGCACCTCCCTCACG +
Preference number: 5 (lower is better)
Translates to: RAADRQAGRGWPVAS*GCRASPGVIRTSLT
Trigger: CGTGAGGGAGGTGCGGATCACACCAGGGCTTGCTCTGCACCCTCAGCTGGCTACCGGCCATCCTCTGCCTGCCTGTCTGTCCGCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS CCA 90 bp AGCCCAAGCACTTCTGTCCCCCTTCGTGGGAATGCGCTGGTCTCCTaGGGTACGACCCTCCCCGCTCCTGCCCGGGCCATGCTACTCACC +
Preference number: 5 (lower is better)
Translates to: SPSTSVPLRGNALVS*GTTLPAPARAMLLT
Trigger: GGTGAGTAGCATGGCCCGGGCAGGAGCGGGGAGGGTCGTACCCCAGGAGACCAGCGCATTCCCACGAAGGGGGACAGAAGTGCTTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS CCA 90 bp AGCCCCGTCGGTCCTGGTGGTCTTGGGACCGGAGAGCGACAGATGTaGAAACCGAGGCCCCTCAGTGAAGAGCTGCCAGGGTGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: SPVGPGGLGTGERQM*KPRPLSEELPGWSP
Trigger: AGGCGACCACCCTGGCAGCTCTTCACTGAGGGGCCTCGGTTTCCACATCTGTCGCTCTCCGGTCCCAAGACCACCAGGACCGACGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 90 bp AGGCAGAGGATGGCCGGTAGCCAGCTGAGGGTGCAGAGCAAGCCCTaGTGTGATCCGCACCTCCCTCACGCAGTCACATTCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQRMAGSQLRVQSKP*CDPHLPHAVTFQQA
Trigger: AGCCTGCTGGAATGTGACTGCGTGAGGGAGGTGCGGATCACACCAGGGCTTGCTCTGCACCCTCAGCTGGCTACCGGCCATCCTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS GCA 90 bp CCGGAGAGCGACAGATGTGGAAACCGAGGCCCCTCAGTGAAGAGCTaGCAGGGTGGTCGCCTTAGAGCAAAGGCGTTCCTCATTCCGCCT +
Preference number: 5 (lower is better)
Translates to: PESDRCGNRGPSVKS*QGGRLRAKAFLIPP
Trigger: AGGCGGAATGAGGAACGCCTTTGCTCTAAGGCGACCACCCTGGCAGCTCTTCACTGAGGGGCCTCGGTTTCCACATCTGTCGCTCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS TCA 90 bp TCTTGGGACCGGAGAGCGACAGATGTGGAAACCGAGGCCCCTCAGTaGAGAGCTGCCAGGGTGGTCGCCTTAGAGCAAAGGCGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SWDRRATDVETEAPQ*RAARVVALEQRRSS
Trigger: TGAGGAACGCCTTTGCTCTAAGGCGACCACCCTGGCAGCTCTTCACTGAGGGGCCTCGGTTTCCACATCTGTCGCTCTCCGGTCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS GCA 72 bp CCTGGGGTACGACCCTCCCCGCTCCTGCCCGGGCCATaGTACTCACCGTGTCCACGGCGCTCTCCACACTGG +
Preference number: 6 (lower is better)
Translates to: PGVRPSPLLPGP*YSPCPRRSPHW
Trigger: CCAGTGTGGAGAGCGCCGTGGACACGGTGAGTAGCATGGCCCGGGCAGGAGCGGGGAGGGTCGTACCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS GCA 72 bp TGCGCTGGTCTCCTGGGGTACGACCCTCCCCGCTCCTaGCCGGGCCATGCTACTCACCGTGTCCACGGCGCT +
Preference number: 6 (lower is better)
Translates to: CAGLLGYDPPRS*PGHATHRVHGA
Trigger: AGCGCCGTGGACACGGTGAGTAGCATGGCCCGGGCAGGAGCGGGGAGGGTCGTACCCCAGGAGACCAGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS CCA 72 bp GACCCTCCCGGAGAGCCCCGTCGGTCCTGGTGGTCTTaGGACCGGAGAGCGACAGATGTGGAAACCGAGGCC +
Preference number: 6 (lower is better)
Translates to: DPPGEPRRSWWS*DRRATDVETEA
Trigger: GGCCTCGGTTTCCACATCTGTCGCTCTCCGGTCCCAAGACCACCAGGACCGACGGGGCTCTCCGGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 72 bp GGGGCTGACCCTCCCGGAGAGCCCCGTCGGTCCTGGTaGTCTTGGGACCGGAGAGCGACAGATGTGGAAACC +
Preference number: 6 (lower is better)
Translates to: GADPPGEPRRSW*SWDRRATDVET
Trigger: GGTTTCCACATCTGTCGCTCTCCGGTCCCAAGACCACCAGGACCGACGGGGCTCTCCGGGAGGGTCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 72 bp GGAGGGGCTGACCCTCCCGGAGAGCCCCGTCGGTCCTaGTGGTCTTGGGACCGGAGAGCGACAGATGTGGAA +
Preference number: 6 (lower is better)
Translates to: GGADPPGEPRRS*WSWDRRATDVE
Trigger: TTCCACATCTGTCGCTCTCCGGTCCCAAGACCACCAGGACCGACGGGGCTCTCCGGGAGGGTCAGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 72 bp CCGGAGGCCGAATACTTTTGGGAGGACCTAAACACGTaGGAGGGTCCGGACGGGTGGGAGCGGCGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: PEAEYFWEDLNT*EGPDGWERREA
Trigger: GGCCTCCCGCCGCTCCCACCCGTCCGGACCCTCCCACGTGTTTAGGTCCTCCCAAAAGTATTCGGCCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 72 bp ACTTCTGTCCCCCTTCGTGGGAATGCGCTGGTCTCCTaGGGTACGACCCTCCCCGCTCCTGCCCGGGCCATG +
Preference number: 6 (lower is better)
Translates to: TSVPLRGNALVS*GTTLPAPARAM
Trigger: CATGGCCCGGGCAGGAGCGGGGAGGGTCGTACCCCAGGAGACCAGCGCATTCCCACGAAGGGGGACAGAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS TCA 72 bp GACAGACAGGCAGGCAGAGGATGGCCGGTAGCCAGCTaGGGGTGCAGAGCAAGCCCTGGTGTGATCCGCACC +
Preference number: 6 (lower is better)
Translates to: DRQAGRGWPVAS*GCRASPGVIRT
Trigger: GGTGCGGATCACACCAGGGCTTGCTCTGCACCCTCAGCTGGCTACCGGCCATCCTCTGCCTGCCTGTCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS CCA 72 bp TGCTTCCGTGTCACCCTGGCCGTCCTTCCCTGCGCCTaGAGGTCTCCCCTGACCGTCCCGCAGCTGAAATCT +
Preference number: 6 (lower is better)
Translates to: CFRVTLAVLPCA*RSPLTVPQLKS
Trigger: AGATTTCAGCTGCGGGACGGTCAGGGGAGACCTCCAGGCGCAGGGAAGGACGGCCAGGGTGACACGGAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223271.8
ENST00000467793.5
CDS CCA 72 bp GGTCCTGGTGGTCTTGGGACCGGAGAGCGACAGATGTaGAAACCGAGGCCCCTCAGTGAAGAGCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: GPGGLGTGERQM*KPRPLSEELPG
Trigger: CCCTGGCAGCTCTTCACTGAGGGGCCTCGGTTTCCACATCTGTCGCTCTCCGGTCCCAAGACCACCAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2
CDS CCA 72 bp ATGGCCGGTAGCCAGCTGAGGGTGCAGAGCAAGCCCTaGTGTGATCCGCACCTCCCTCACGCAGTCACATTC +
Preference number: 6 (lower is better)
Translates to: MAGSQLRVQSKP*CDPHLPHAVTF
Trigger: GAATGTGACTGCGTGAGGGAGGTGCGGATCACACCAGGGCTTGCTCTGCACCCTCAGCTGGCTACCGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478771.2
CDS GCA 72 bp GACAGATGTGGAAACCGAGGCCCCTCAGTGAAGAGCTaGCAGGGTGGTCGCCTTAGAGCAAAGGCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: DRCGNRGPSVKS*QGGRLRAKAFL
Trigger: GAGGAACGCCTTTGCTCTAAGGCGACCACCCTGGCAGCTCTTCACTGAGGGGCCTCGGTTTCCACATCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466675.5
ENST00000478771.2