Pregenerated sensors for RARRES1 (Homo sapiens)
Ensembl gene IDs: ENSG00000118849Ensembl transcript IDs: ENST00000237696.10, ENST00000462663.5, ENST00000471444.1, ENST00000479756.1, ENST00000498640.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CTTTCAGTTACATCAGTGTTTCTTTTGATGCATGTTTaGAGACAGCTTTATCTGGTGAGACAGACGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LSVTSVFLLMHV*RQLYLVRQTFY Trigger: ATAGAACGTCTGTCTCACCAGATAAAGCTGTCTGCAAACATGCATCAAAAGAAACACTGATGTAACTGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGGAGCAGGCAGCCGTTaGCGGCGGGGCTGCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACGAGSR*RRGCMD Trigger: GTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCACGCGCGGCCCTCCTaGACCTCGGCCAGCACTCGT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACHARPS*TSASTR Trigger: ACGAGTGCTGGCCGAGGTGCAGGAGGGCCGCGCGTG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCGGAAGTTGAAGAAGTaGAGCGCCGCGCGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACRKLKK*SAARAA Trigger: GGCGGCGCGCGCGGCGCTTCACTTCTTCAACTTCCG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCCTGCTGCAGGAGCCTaGGCGGGACCCCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACPAAGA*AGPQHP Trigger: AGGATGCTGGGGTCCCGCGCAGGCTCCTGCAGCAGG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGCACTCGTAGCGCGCTaGGCGAGCCGGACCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACALVAR*ASRTGS Trigger: ACTTCCGGTCCGGCTCGCCCAGCGCGCTACGAGTGC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGCCGGCGGGGCTGCATaGACGCAGGAAAGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACAGGAA*TQESWL Trigger: GAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCAGCCGGACCGGAAGTTaGAGAAGTGAAGCGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACSRTGS*RSEAPR Trigger: GCGCGGCGCTTCACTTCTTCAACTTCCGGTCCGGCT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCGTTGCCGGCGGGGCTaGATGGACGCAGGAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACRCRRG*MDAGKL Trigger: CAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGGACGCAGGAAAGTTaGCTCGGCACCCGACAGACA | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACWTQES*LGTRQT Trigger: TGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCGTCCCTCACCTTCCTaGAGTAAAGACTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACRPSPS*SKDSGL Trigger: CAACCCAGAGTCTTTACTTCAGGAAGGTGAGGGACG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGTAGCGCTCTGTGCTaGAGACCACGTGAACTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACCSALC*RPRELY Trigger: GTAAAGTTCACGTGGTCTTCAGCACAGAGCGCTACA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCAAGCCAAATCCCAGATaGGTCTCAGAGAGGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACKPNPR*VSERDQ Trigger: TTGATCCCTCTCTGAGACTCATCTGGGATTTGGCTT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGTTGGTACTACAGCTaGTCCTTCTTCAGTTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACCWYYS*SFFSSG Trigger: TCCGGAACTGAAGAAGGATCAGCTGTAGTACCAACA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTTTACATCCCTCTTTTaGATTAATCCACGCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACFTSLF*INPRAA Trigger: GGCCGCGCGTGGATTAATCCAAAAGAGGGATGTAAA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGTGCTGAAGACCACGTaGACTTTACATCCCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACVLKTT*TLHPSF Trigger: AAAAGAGGGATGTAAAGTTCACGTGGTCTTCAGCAC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGCCAAGTAGTAGTGTaGCACCTGTGTTGTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACCQVVV*HLCCHF Trigger: GAAATGACAACACAGGTGTCACACTACTACTTGGCA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGGTGTCTGTAGCTCTTaGCAGTGGTACTTCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACGVCSS*QWYFTL Trigger: TAAAGTGAAGTACCACTGTCAAGAGCTACAGACACC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCAGAGTTCAGTGTGCATaGGCTTCCAGAGTTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACRVQCA*ASRVKS Trigger: GCTTTTAACTCTGGAAGCGCATGCACACTGAACTCT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGGGTTTCTGATTCTTaGAAAACACTCGAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACWVSDS*KTLEQN Trigger: GTTCTGCTCGAGTGTTTTTCAAGAATCAGAAACCCA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGTTGGTCTGGGTTTCTaGTTCTTGAAAAACACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACVGLGF*FLKNTR Trigger: TCGAGTGTTTTTCAAGAATCAGAAACCCAGACCAAC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGTGTACAAGTTACATTaGTGGTTGGTCTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACVYKLH*WLVWVS Trigger: AGAAACCCAGACCAACCATCAATGTAACTTGTACAC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCATCAGTGTTTCTTTTaGTGCATGTTTGCAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACHQCFF*CMFADS Trigger: GCTGTCTGCAAACATGCATCAAAAGAAACACTGATG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTCATTAGTTTTCCACTaGCTCACACTAGTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACSLVFH*LTLVSC Trigger: ACAGCTCACTAGTGTGAGGCAGTGGAAAACTAATGA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCACCAGACCAAGTGAATaGGACAGGGAATTATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACTRPSE*DRELFP Trigger: AGGAAATAATTCCCTGTCGCATTCACTTGGTCTGGT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGATTATCAGGTATGCTaGCTATTTCCAAGGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACDYQVC*LFPRGF Trigger: AAAACCCCTTGGAAATAGTCAGCATACCTGATAATC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGACAGCTTTATCTGGTaGGACAGACGTTCTATTATT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACDSFIW*DRRSII Trigger: AATAATAGAACGTCTGTCTCACCAGATAAAGCTGTC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCTTTTGATGCATGTTTaGAGACAGCTTTATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACLLMHV*RQLYLV Trigger: CACCAGATAAAGCTGTCTGCAAACATGCATCAAAAG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTTTTCTTTTTCTCGATaGGCCGTGTACAAGTTACAT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACFSFSR*AVYKLH Trigger: ATGTAACTTGTACACGGCTCATCGAGAAAAAGAAAA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTGGTGCAACATACACTaGTTATCCAGGTTTTACATT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACWCNIH*LSRFYI Trigger: AATGTAAAACCTGGATAATCAGTGTATGTTGCACCA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCAGTTACATTGATGGTTaGTCTGGGTTTCTGATTCTT | + |
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Preference number: 4 (lower is better) Translates to: PEEPAGDCLALSRVQCACSYIDG*SGFLIL Trigger: AAGAATCAGAAACCCAGACCAACCATCAATGTAACT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| 3UTR CAA 72 bp | ACTTTCAGTTACATCAGTGTTTCTTTTGATGCATGTTaGCAGACAGCTTTATCTGGTGAGACAGACGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: TFSYISVSFDAC*QTALSGETDVL Trigger: TAGAACGTCTGTCTCACCAGATAAAGCTGTCTGCAAACATGCATCAAAAGAAACACTGATGTAACTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS GCA 90 bp | CCCCTGGGCCCGGACCAGGGAGCAGGCAGCCGTTGCCGGCGGGGCTaGATGGACGCAGGAAAGTTGGCTCGGCACCCGACAGACACGGGC | + |
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Preference number: 5 (lower is better) Translates to: PLGPDQGAGSRCRRG*MDAGKLARHPTDTG Trigger: GCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCCTGGTCCGGGCCCAGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000498640.1 |
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| CDS TCA 90 bp | AGCACTCGTAGCGCGCTGGGCGAGCCGGACCGGAAGTTGAAGAAGTaGAGCGCCGCGCGCGCCGCCTGCTGCAGGAGCCTGCGCGGGACC | + |
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Preference number: 5 (lower is better) Translates to: STRSALGEPDRKLKK*SAARAACCRSLRGT Trigger: GGTCCCGCGCAGGCTCCTGCAGCAGGCGGCGCGCGCGGCGCTTCACTTCTTCAACTTCCGGTCCGGCTCGCCCAGCGCGCTACGAGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000237696.10 ENST00000479756.1 ENST00000498640.1 |
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| CDS CCA 90 bp | GAGCAGGCAGCCGTTGCCGGCGGGGCTGCATGGACGCAGGAAAGTTaGCTCGGCACCCGACAGACACGGGCTCGGAGCGGGCAGTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: EQAAVAGGAAWTQES*LGTRQTRARSGQCR Trigger: CCGGCACTGCCCGCTCCGAGCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498640.1 |
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| CDS CCA 90 bp | TGGGCCCGGACCAGGGAGCAGGCAGCCGTTGCCGGCGGGGCTGCATaGACGCAGGAAAGTTGGCTCGGCACCCGACAGACACGGGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: WARTREQAAVAGGAA*TQESWLGTRQTRAR Trigger: CCGAGCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCCTGGTCCGGGCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498640.1 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCGGGAGCAGGCAGCCGTaGCCGGCGGGGCTGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACGSRQP*PAGLHG Trigger: TCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCC...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCATGGACGCAGGAAAGTaGGCTCGGCACCCGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACMDAGK*ARHPTD Trigger: GTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCAT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCAGTGTGACACCTGTGTaGTCATTTCCCACATCACGT | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACSVTPV*SFPTSR Trigger: ACGTGATGTGGGAAATGACAACACAGGTGTCACACT...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTTCACTTTAAGAGGTTaGCCAGGGTACCAGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACFTLRG*PGYQTK Trigger: CTTGGTCTGGTACCCTGGCAAACCTCTTAAAGTGAA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS TCA 90 bp | GATCCTTCTTCAGTTCCGGAGGCTTCTTCTGGTGTCTGTAGCTCTTaGCAGTGGTACTTCACTTTAAGAGGTTTGCCAGGGTACCAGACC | + |
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Preference number: 5 (lower is better) Translates to: DPSSVPEASSGVCSS*QWYFTLRGLPGYQT Trigger: GGTCTGGTACCCTGGCAAACCTCTTAAAGTGAAGTACCACTGTCAAGAGCTACAGACACCAGAAGAAGCCTCCGGAACTGAAGAAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCGTGTACAAGTTACATaGATGGTTGGTCTGGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACRVQVT*MVGLGF Trigger: GAAACCCAGACCAACCATCAATGTAACTTGTACACG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS TCA 90 bp | CAAAGTCCACTGCCTCACACTAGTGAGCTGTGCCAAGTAGTAGTGTaGCACCTGTGTTGTCATTTCCCACATCACGTAAGAGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QSPLPHTSELCQVVV*HLCCHFPHHVRASK Trigger: CTTGGAAGCTCTTACGTGATGTGGGAAATGACAACACAGGTGTCACACTACTACTTGGCACAGCTCACTAGTGTGAGGCAGTGGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462663.5 |
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| CDS TCA 90 bp | TCTTACCCACTGCCTCACACTAGTGAGCTGTGCCAAGTAGTAGTGTaGCACCTGTGTTGTCATTTCCCACATCACGTAAGAGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SYPLPHTSELCQVVV*HLCCHFPHHVRASK Trigger: CTTGGAAGCTCTTACGTGATGTGGGAAATGACAACACAGGTGTCACACTACTACTTGGCACAGCTCACTAGTGTGAGGCAGTGGGTAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479756.1 |
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| CDS TCA 90 bp | AGTTTTCCACTGCCTCACACTAGTGAGCTGTGCCAAGTAGTAGTGTaGCACCTGTGTTGTCATTTCCCACATCACGTAAGAGCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SFPLPHTSELCQVVV*HLCCHFPHHVRASK Trigger: CTTGGAAGCTCTTACGTGATGTGGGAAATGACAACACAGGTGTCACACTACTACTTGGCACAGCTCACTAGTGTGAGGCAGTGGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCCAAGGGGTTTTTCAGTaGCTTCATTTGCTTGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACQGVFQ*LHLLVK Trigger: CTTTACAAGCAAATGAAGCAACTGAAAAACCCCTTG...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAACCTGCTGGTGACTGTTTAGCACTGAGCAGAGTTCAGTGTGCATGCTTTCAGTTGCTTCATTaGCTTGTAAAGCAGGTAATC | + |
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Preference number: 5 (lower is better) Translates to: PEEPAGDCLALSRVQCACFQLLH*LVKQVI Trigger: GATTACCTGCTTTACAAGCAAATGAAGCAACTGAAA...GCATGCACACTGAACTCTGCTCAGTGCTAAACAGTCACCAGCAGGTTCCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS TCA 90 bp | TCGATGAGCCGTGTACAAGTTACATTGATGGTTGGTCTGGGTTTCTaGTTCTTGAAAAACACTCGAGCAGAACATTTCCCCAAACGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SMSRVQVTLMVGLGF*FLKNTRAEHFPKRP Trigger: GGGACGTTTGGGGAAATGTTCTGCTCGAGTGTTTTTCAAGAATCAGAAACCCAGACCAACCATCAATGTAACTTGTACACGGCTCATCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000479756.1 |
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| CDS CAA 72 bp | CGGGCCCCTGGGCCCGGACCAGGGAGCAGGCAGCCGTaGCCGGCGGGGCTGCATGGACGCAGGAAAGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAPGPGPGSRQP*PAGLHGRRKVG Trigger: GCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCCTGGTCCGGGCCCAGGGGCCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000237696.10 ENST00000479756.1 ENST00000498640.1 |
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| CDS CAA 90 bp | GGAGCAGGCAGCCGTTGCCGGCGGGGCTGCATGGACGCAGGAAAGTaGGCTCGGCACCCGACAGACACGGGCTCGGAGCGGGCAGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: GAGSRCRRGCMDAGK*ARHPTDTGSERAVP Trigger: CGGCACTGCCCGCTCCGAGCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498640.1 |
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| CDS TCA 72 bp | AGCGCGCTGGGCGAGCCGGACCGGAAGTTGAAGAAGTaGAGCGCCGCGCGCGCCGCCTGCTGCAGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SALGEPDRKLKK*SAARAACCRSL Trigger: CAGGCTCCTGCAGCAGGCGGCGCGCGCGGCGCTTCACTTCTTCAACTTCCGGTCCGGCTCGCCCAGCGCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000237696.10 ENST00000479756.1 ENST00000498640.1 |
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| CDS CCA 72 bp | GCCGTTGCCGGCGGGGCTGCATGGACGCAGGAAAGTTaGCTCGGCACCCGACAGACACGGGCTCGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVAGGAAWTQES*LGTRQTRARSG Trigger: CCCGCTCCGAGCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498640.1 |
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| CDS GCA 72 bp | CCGGACCAGGGAGCAGGCAGCCGTTGCCGGCGGGGCTaGATGGACGCAGGAAAGTTGGCTCGGCACCCGACA | + |
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Preference number: 6 (lower is better) Translates to: PDQGAGSRCRRG*MDAGKLARHPT Trigger: TGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCCTGGTCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000498640.1 |
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| CDS CAA 72 bp | AGCCGTTGCCGGCGGGGCTGCATGGACGCAGGAAAGTaGGCTCGGCACCCGACAGACACGGGCTCGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRCRRGCMDAGK*ARHPTDTGSER Trigger: CCGCTCCGAGCCCGTGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498640.1 |
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| CDS CCA 72 bp | ACCAGGGAGCAGGCAGCCGTTGCCGGCGGGGCTGCATaGACGCAGGAAAGTTGGCTCGGCACCCGACAGACA | + |
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Preference number: 6 (lower is better) Translates to: TREQAAVAGGAA*TQESWLGTRQT Trigger: TGTCTGTCGGGTGCCGAGCCAACTTTCCTGCGTCCATGCAGCCCCGCCGGCAACGGCTGCCTGCTCCCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000498640.1 |
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| CDS GCA 72 bp | CATCCCTCTTTTGGATTAATCCACGCGCGGCCCTCCTaGACCTCGGCCAGCACTCGTAGCGCGCTGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: HPSFGLIHARPS*TSASTRSALGE Trigger: CTCGCCCAGCGCGCTACGAGTGCTGGCCGAGGTGCAGGAGGGCCGCGCGTGGATTAATCCAAAAGAGGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000237696.10 ENST00000479756.1 ENST00000498640.1 |
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| CDS TCA 72 bp | TCAGTTCCGGAGGCTTCTTCTGGTGTCTGTAGCTCTTaGCAGTGGTACTTCACTTTAAGAGGTTTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SVPEASSGVCSS*QWYFTLRGLPG Trigger: CCCTGGCAAACCTCTTAAAGTGAAGTACCACTGTCAAGAGCTACAGACACCAGAAGAAGCCTCCGGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS TCA 72 bp | CTGCCTCACACTAGTGAGCTGTGCCAAGTAGTAGTGTaGCACCTGTGTTGTCATTTCCCACATCACGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPHTSELCQVVV*HLCCHFPHHVR Trigger: TCTTACGTGATGTGGGAAATGACAACACAGGTGTCACACTACTACTTGGCACAGCTCACTAGTGTGAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000237696.10 ENST00000462663.5 ENST00000471444.1 ENST00000479756.1 |
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| CDS TCA 72 bp | CCTGAAGTAAAGACTCTGGGTTGTAGCGCTCTGTGCTaGAGACCACGTGAACTTTACATCCCTCTTTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PEVKTLGCSALC*RPRELYIPLLD Trigger: ATCCAAAAGAGGGATGTAAAGTTCACGTGGTCTTCAGCACAGAGCGCTACAACCCAGAGTCTTTACTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000479756.1 |
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| CDS TCA 72 bp | CGTGTACAAGTTACATTGATGGTTGGTCTGGGTTTCTaGTTCTTGAAAAACACTCGAGCAGAACATTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RVQVTLMVGLGF*FLKNTRAEHFP Trigger: GGGGAAATGTTCTGCTCGAGTGTTTTTCAAGAATCAGAAACCCAGACCAACCATCAATGTAACTTGTACACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000237696.10 ENST00000479756.1 |
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| CDS TCA 72 bp | TTCACTTTAAGAGGTTTGCCAGGGTACCAGACCAAGTaGATGCGACAGGGAATTATTTCCTGTGTTGATAAT | + |
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Preference number: 6 (lower is better) Translates to: FTLRGLPGYQTK*MRQGIISCVDN Trigger: ATTATCAACACAGGAAATAATTCCCTGTCGCATTCACTTGGTCTGGTACCCTGGCAAACCTCTTAAAGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237696.10 |
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| CDS CAA 72 bp | GCTGACTATTTCCAAGGGGTTTTTCAGTTGCTTCATTaGCTTGTAAAGCAGGTAATCCTCTTGTTGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ADYFQGVFQLLH*LVKQVILLLSF Trigger: AAAAGACAACAAGAGGATTACCTGCTTTACAAGCAAATGAAGCAACTGAAAAACCCCTTGGAAATAGTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000237696.10 ENST00000462663.5 ENST00000479756.1 |
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