RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RARA (Homo sapiens)

Ensembl gene IDs: ENSG00000131759

Ensembl transcript IDs: ENST00000254066.10, ENST00000394081.7, ENST00000394086.7, ENST00000394089.6, ENST00000420042.1, ENST00000425707.7, ENST00000475125.1, ENST00000577646.5, ENST00000579727.5, ENST00000582914.1

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAGGAGCCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTaGCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: PRSQVWENSVPGPLL*PAPCLMVGAGKCQG
Trigger: GCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGGCTCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR GCA 90 bp CTCTGCCGAGGAGCCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTaGTCTGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCC +
Preference number: 1 (lower is better)
Translates to: LCRGARSGKTLSRGP*SALLHASWWVQASA
Trigger: GGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGGCTCCTCGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR GCA 90 bp GAGCCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTaGTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: EPGLGKLCPGALALP*SMPHGGCRQVPRPG
Trigger: TCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CCA 90 bp TGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCACGCGCATGTGTGTaGTGTCTGGGGGCCCTATGGGGGTGCTGGTGGCTGAGGCCGGGG +
Preference number: 1 (lower is better)
Translates to: CPVCVCLCVCARACV*CLGALWGCWWLRPG
Trigger: CCCCGGCCTCAGCCACCAGCACCCCCATAGGGCCCCCAGACACCACACACATGCGCGTGCGCACACACACAAACACACACACACTGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CCA 90 bp AAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTCATaGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAG +
Preference number: 1 (lower is better)
Translates to: KTLSRGPCSALLHAS*WVQASAKARSLSFQ
Trigger: CTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR GCA 90 bp GTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTaGGCACGCGCATGTGTGTGGTGTCTGGGGGCCCTATGGGGGTGC +
Preference number: 1 (lower is better)
Translates to: VCRPIYCPVCVCLCV*ARACVWCLGALWGC
Trigger: GCACCCCCATAGGGCCCCCAGACACCACACACATGCGCGTGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR TCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR TCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCCCCCAGGACCCATCCTaGGACCCAGGACCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGPQDPS*DPGPGA
Trigger: GGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGG...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR TCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCAGAGCAGGCAGTCCACTaGGGGCCCAGGCCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPEQAVH*GPRPLS
Trigger: GGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTC...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 2 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR GCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCATGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 2 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGAAGGTCCCCAGTACTaGCCGGGAGGGCAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGLGKLCPGALALPCSMPEGPQY*PGGQVG
Trigger: CCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CAA 90 bp GCTCTGCCGAGGAGCCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTaGCTCTGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: ALPRSQVWENSVPGP*LCPAPCLMVGAGKC
Trigger: GCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGGCTCCTCGGCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGGCCCTATGGGGGTGCTaGTGGCTGAGGCCGGGGGTG +
Preference number: 2 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQALWGC*WLRPGV
Trigger: CACCCCCGGCCTCAGCCACCAGCACCCCCATAGGGC...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR TCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGGAGCAGGCAGTCCACTaGGGGCCCAGGCCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWEQAVH*GPRPLS
Trigger: GGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTC...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR GCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 2 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 2 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWRWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGCCTCACTCAGTTCCTaGCCTCGGCCTCTGACGTCA +
Preference number: 2 (lower is better)
Translates to: PGLGKLCPGALALPCSMPASLSS*PRPLTS
Trigger: TGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGACATGAAAGGAGAGTaGGGGCCCCTTCCGAGCCAC +
Preference number: 2 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPDMKGE*GPLPSH
Trigger: GTGGCTCGGAAGGGGCCCCCACTCTCCTTTCATGTC...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR TCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGACGGGAGGCAGCTCTaGCGAGGAGCCAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVDGRQL*RGARSG
Trigger: CCCAGACCTGGCTCCTCGGCAGAGCTGCCTCCCGTC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCATGGTGCGGGGTCACATaGTCGGTAGAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPWCGVT*SVERQR
Trigger: TCTCTGCCTTTCTACCGACCATGTGACCCCGCACCA...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CAA 90 bp GGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTaGTGTGTGTGCGCACGCGCATGTGTGTGGTGTCTGGGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: GPSVCRPIYCPVCVC*CVCARACVWCLGAL
Trigger: TAGGGCCCCCAGACACCACACACATGCGCGTGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTCCAGCTGGGGAGCAATaGCTTGTGAGTTCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: PGLGKLCPGALALPCSMPPAGEQ*LVSSED
Trigger: ATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGG...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGAGGGAGAAAGGGGCTaGCGGCTTCTCCAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVEGERG*RLLQWE
Trigger: CTCCCACTGGAGAAGCCGCCAGCCCCTTTCTCCCTC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCAGCGAGAATTAATACCTaGGGTTGGTATGGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPARINT*GWYGRV
Trigger: TACCCTGCCATACCAACCCCAGGTATTAATTCTCGC...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTCATGTGTGTGGTGTCTaGGGGCCCTATGGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSHVCGV*GPYGGA
Trigger: AGCACCCCCATAGGGCCCCCAGACACCACACACATG...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGATGCCTCATGGTGGGTaGAGGCAAGTGCCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVMPHGG*RQVPRP
Trigger: TGGCCTTGGCACTTGCCTGCACCCACCATGAGGCAT...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGCCCTTGCTCTGCCCTaGTCCATGCCTCATGGTGGG +
Preference number: 2 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAALALP*SMPHGG
Trigger: CCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 2 (lower is better)
Translates to: NQRELIPGVGMAGYVQGERWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTACCTGGGGTTGGTATaGCAGGGTATGTACAGGGGG +
Preference number: 2 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQYLGLV*QGMYRG
Trigger: CCCCCTGTACATACCCTGCCATACCAACCCCAGGTA...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTCTCCATGCCTCATGGTaGGTGCAGGCAAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSLHASW*VQASAK
Trigger: CTTGGCACTTGCCTGCACCCACCATGAGGCATGGAG...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAATGTCCAAGGAGTCGCTaGCTCCTCCCTCCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: NQRELIPGVGMAGYVQGECPRSR*LLPPRP
Trigger: GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACA...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAATTAATACCTGGGGTTaGTATGGCAGGGTATGTACA +
Preference number: 2 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPINTWG*YGRVCT
Trigger: TGTACATACCCTGCCATACCAACCCCAGGTATTAAT...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 2 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQRWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGGGAGCCAAGTCCTaGCGTTTGCTGGTGATGAAG +
Preference number: 2 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGGGAKS*RLLVMK
Trigger: CTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
53% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR TCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAATGGCTTGTGAGTTCTaGGGATGGGGGAGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEMACEF*GWGSQV
Trigger: GACTTGGCTCCCCCATCCTCAGAACTCACAAGCCAT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR TCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGAGCAATGGCTTGTaGGTTCTGAGGATGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TKPARINTWGWYGRVCTGGSNGL*VLRMGE
Trigger: CTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGATGTGGTGAGCTaGGCAGAGGGGTGTCTTGAT +
Preference number: 2 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGEDVVS*AEGCLD
Trigger: ATCAAGACACCCCTCTGCCCAGCTCACCACATCTTC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTTGAGGTTCCCCAGCTaGGGAGCAATGGCTTGTGAG +
Preference number: 2 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQLRFPS*GAMACE
Trigger: CTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR CCA 72 bp TCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTCATaGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: SRGPCSALLHAS*WVQASAKARSL
Trigger: CAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR GCA 72 bp CTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTaGTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCA +
Preference number: 3 (lower is better)
Translates to: LGKLCPGALALP*SMPHGGCRQVP
Trigger: TGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR GCA 72 bp CAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTaGCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: QVWENSVPGPLL*PAPCLMVGAGK
Trigger: CTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CCA 72 bp TGTGTGTGTTTGTGTGTGTGCGCACGCGCATGTGTGTaGTGTCTGGGGGCCCTATGGGGGTGCTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: CVCLCVCARACV*CLGALWGCWWL
Trigger: CAGCCACCAGCACCCCCATAGGGCCCCCAGACACCACACACATGCGCGTGCGCACACACACAAACACACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CAA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR-3UTR CAA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CAA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: TKPARINTWGWYGRVCTGGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CAA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGCCAAGTCCTGGCGTTaGCTGGTGATGAAGATGTGG +
Preference number: 3 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEAKSWR*LVMKMW
Trigger: CCACATCTTCATCACCAGCAAACGCCAGGACTTGGC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
3UTR-3UTR CAA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGCCAAGTCCTGGCGTTaGCTGGTGATGAAGATGTGG +
Preference number: 3 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQAKSWR*LVMKMW
Trigger: CCACATCTTCATCACCAGCAAACGCCAGGACTTGGC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTCCTGTAGGCCCGTCCTaGGGGGTAAGGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAPVGPS*GVRRGH
Trigger: GTGCCCCCTCCTTACCCCGCAGGACGGGCCTACAGG...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACCGGCGCCCTGGTGCTaGTCGGCATCAGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPPAPWC*SASGCG
Trigger: CCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGG...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTACATGTGGGGGCGGCTaGGCCTCCGCTTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQATCGGG*ASASAR
Trigger: ACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGT...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCGCCCTATGGGGGTGCTaGTGGCTGAGGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGALWGC*WLRPGV
Trigger: CACCCCCGGCCTCAGCCACCAGCACCCCCATAGGGC...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTGCGCACCTTCTCAATaGGCTCCCCCACCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQACAPSQ*APPPPA
Trigger: CGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACCCCAGGACCCATCCTaGGACCCAGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPPQDPS*DPGPGA
Trigger: GGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGG...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCCCCAGGACCCATCCTaGGACCCAGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLPQDPS*DPGPGA
Trigger: GGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGGCAGGAGCTGCTGTTaGTGGCCATGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAGRSCC*WPCQAA
Trigger: GGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTAGTGGGTGGCCGGGCTaGTTCTGTTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQASGWPG*FCWSWG
Trigger: GCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACT...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCGACGGGAGGCAGCTCTaGCGAGGAGCCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGDGRQL*RGARSG
Trigger: CCCAGACCTGGCTCCTCGGCAGAGCTGCCTCCCGTC...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTGGGGCCCTATGGGGGTaGTGGTGGCTGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCGALWG*WWLRPG
Trigger: CCCCGGCCTCAGCCACCAGCACCCCCATAGGGCCCC...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCACCGGCGCCCTGGTGCTaGTCGGCATCAGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPPAPWC*SASGCG
Trigger: CCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGG...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCAGGGCCTGGGCCCAGATaGGGTTTGGGTGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPGPGPR*GLGGQP
Trigger: GGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCC...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQACVHVA*AVTGSG
Trigger: CCCACTCCCCGTGACCGCCCACGCCACATGGACACA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGGCAGCTCGGGCCCCTaGCCAGCCCCTTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPGSSGP*PAPSQW
Trigger: CCACTGTGAAGGGGCTGGCCAGGGGCCCGAGCTGCC...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGAGTCCGGAGCGGGGTaGAGTACGGACCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHESGAG*STDPGR
Trigger: CCGCCCCGGGTCCGTACTCCACCCCGCTCCGGACTC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR TCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGGGGGCCATGTCCTGTaGTGCTGCTCAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAGGHVL*CCSGVC
Trigger: GCACACACCTGAGCAGCATCACAGGACATGGCCCCC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR TCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCTGCGCACCTTCTCAATaGGCTCCCCCACCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGCAPSQ*APPPPA
Trigger: CGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCA...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGAGCAGGCAGTCCACTaGGGGCCCAGGCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVEQAVH*GPRPLS
Trigger: GGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCACCCCAGGACCCATCCTaGGACCCAGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPPQDPS*DPGPGA
Trigger: GGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGG...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAGGGGGCACAGGGACATaGAAGGAGAGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPGGTGT*KESGGP
Trigger: GGGGCCCCCACTCTCCTTTCATGTCCCTGTGCCCCC...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGCCCTGTCCTGGAGCTaGTGTCCAAAGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAALSWS*CPKRAG
Trigger: GCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGGGTACCCATTGAGGTaGCCGCCCCCAGGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVGYPLR*PPPGVG
Trigger: CCCGACACCTGGGGGCGGGCACCTCAATGGGTACCC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTCCACCCGGTCCGGCTaGTCCAGGTCCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVSTRSG*SRSWRS
Trigger: AGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTCCACCCGGTCCGGCTaGTCCAGGTCCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLSTRSG*SRSWRS
Trigger: AGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGAAGGTCCCCAGTACTaGCCGGGAGGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGEGPQY*PGGQVG
Trigger: CCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGAAGGTCCCCAGTACTaGCCGGGAGGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPEGPQY*PGGQVG
Trigger: CCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTC...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGACGGGAGGCAGCTCTaGCGAGGAGCCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPDGRQL*RGARSG
Trigger: CCCAGACCTGGCTCCTCGGCAGAGCTGCCTCCCGTC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATCGAGCTGGGAAGTCCTaGGCGCCGCCCCCGTCACTC +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHRAGKS*APPPSL
Trigger: GAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCG...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGAACCCGGCGCCCTGGTaGTGCTCGGCATCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLNPAPW*CSASGC
Trigger: GCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGAGCGAGCACAGCGTCTaGCCTAACCCGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLSEHSV*PNPAPW
Trigger: CCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGGCCCAGATGGGGTTTaGGTGGTCAGCCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGGPDGV*VVSPPA
Trigger: GGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGGGCCTGGGCCCAGATaGGGTTTGGGTGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLGPGPR*GLGGQP
Trigger: GGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGCAGGGGGCTCTGGTaGGCTTCAGACCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGGRGLW*ASDHPS
Trigger: GGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGGCAGGGGGCTCTGGTaGGCTTCAGACCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPGRGLW*ASDHPS
Trigger: GGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCTGGTGCTGGAGAGTaGTCAGAGCGCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGAGAGE*SERLAG
Trigger: CCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGACATGTGGGGGCGGCTaGGCCTCCGCTTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLTCGGG*ASASAR
Trigger: ACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPRWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCCCTAACCCGGCGCCCTaGTGCTGCTCGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGPNPAP*CCSASG
Trigger: CCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGG...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGCGCACCTTCTCAATaGGCTCCCCCACCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLCAPSQ*APPPPA
Trigger: CGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTCCCCAGGACCCATCCTaGGACCCAGGACCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRPQDPS*DPGPGA
Trigger: GGCCCCTGGTCCTGGGTCTCAGGATGGGTCCTGGGG...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGCTGCTCAGGTGTGTaGTGGCAGGGGGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLCCSGV*WQGADG
Trigger: CCCATCGGCCCCCTGCCAGCACACACCTGAGCAGCA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGTGAAGCCGGGCAGCTaGTTGGCGAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAVKPGS*LANSTV
Trigger: GACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCAC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACGGGCGTGTACCGCGTaGAGATCCGCAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPRACTA*RSAGSG
Trigger: TCCTGATCCTGCGGATCTGCACGCGGTACACGCCCG...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGAGTGGGTGGCCGGGCTaGTTCTGTTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVSGWPG*FCWSWG
Trigger: GCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACT...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCAGTGGGTGGCCGGGCTaGTTCTGTTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSGWPG*FCWSWG
Trigger: GCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACT...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGAGTGGGTGGCCGGGCTaGTTCTGTTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGSGWPG*FCWSWG
Trigger: GCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACT...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCATGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTTGTCCAAGGAGTCGCTaGCTCCTCCCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPCPRSR*LLPPRP
Trigger: GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACA...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTCCAAGGAGTCGCTaGCTCCTCCCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVACPRSR*LLPPRP
Trigger: GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTCCGGGGCCCTTGCTCTaGCCTGCTCCATGCCTCATG +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPPGPLL*PAPCLM
Trigger: CATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGG...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAAACCCGGCGCCCTGGTaGTGCTCGGCATCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPNPAPW*CSASGC
Trigger: GCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTT...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCAACCCGTTCGGGGTaGCAGCGAGCACAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGATRSG*QRAQRL
Trigger: CAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCAACCCGTTCGGGGTaGCAGCGAGCACAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGATRSG*QRAQRL
Trigger: CAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTGGGCCCCAGCTAGGTaGCTGAGGGGGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVWAPAR*LRGPCP
Trigger: AGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGGGGGCCAGGTGGGTTaGGGGATGTCTCAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGGGQVG*GMSQEP
Trigger: CGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
66% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACAGATGGGGTTTGGGTaGTCAGCCCACCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPQMGFG*SAHPPC
Trigger: ACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTG...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGGCCCAGATGGGGTTTaGGTGGTCAGCCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPGPDGV*VVSPPA
Trigger: GGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGGGCCTGGGCCCAGATaGGGTTTGGGTGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPGPGPR*GLGGQP
Trigger: GGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGCAGGGGGCTCTGGTaGGCTTCAGACCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHGRGLW*ASDHPS
Trigger: GGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGAGTGGTCAGAGCGCCTaGCGGGGAGAGTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGSGQSA*RGESTQ
Trigger: CTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACT...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCAGTGGTCAGAGCGCCTaGCGGGGAGAGTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSGQSA*RGESTQ
Trigger: CTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACT...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGGCTGCTCCAGGTCCTaGCGGTCTCCGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVGCSRS*RSPQMR
Trigger: CCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGCTGCTCCAGGTCCTaGCGGTCTCCGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGGCSRS*RSPQMR
Trigger: CCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTACATGTGGGGGCGGCTaGGCCTCCGCTTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCTCGGG*ASASAR
Trigger: ACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGT...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGTCACGGGGAGTGGGTaGCCGGGCTGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAVTGSG*PGCFCW
Trigger: CCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGAC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTCACGGGGAGTGGGTaGCCGGGCTGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGVTGSG*PGCFCW
Trigger: CCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGAC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVACVHVA*AVTGSG
Trigger: CCCACTCCCCGTGACCGCCCACGCCACATGGACACA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGCVHVA*AVTGSG
Trigger: CCCACTCCCCGTGACCGCCCACGCCACATGGACACA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGAGGGCTGTGTCCATGTaGCGTGGGCGGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVARAVSM*RGRSRG
Trigger: TCCCCGTGACCGCCCACGCCACATGGACACAGCCCT...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPRWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGCCTCACTCAGTTCCTaGCCTCGGCCTCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAASLSS*PRPLTS
Trigger: TGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTCTGGGGGCCCTATaGGGGTGCTGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVACLGAL*GCWWLR
Trigger: CCTCAGCCACCAGCACCCCCATAGGGCCCCCAGACA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTGCGCACCTTCTCAATaGGCTCCCCCACCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCCAPSQ*APPPPA
Trigger: CGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCGCACCTTCTCAATaGGCTCCCCCACCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPCAPSQ*APPPPA
Trigger: CGCCGGAGGTGGGGGAGCTCATTGAGAAGGTGCGCA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGGCAGGAGCTGCTGTTaGTGGCCATGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPGRSCC*WPCQAA
Trigger: GGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCAGTGTCGGGCAGGAGCTaGTGTTGCTGGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPVSGRS*CCWPCQ
Trigger: TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACAC...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTGGGTACCCATTGAGGTaGCCGCCCCCAGGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRGYPLR*PPPGVG
Trigger: CCCGACACCTGGGGGCGGGCACCTCAATGGGTACCC...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGCGGGCGTGTACCGCGTaGAGATCCGCAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGRACTA*RSAGSG
Trigger: TCCTGATCCTGCGGATCTGCACGCGGTACACGCCCG...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTCCAGCAGCGGCTCCTaGAGCATGTCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCSSSGS*SMSTRS
Trigger: GGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCTGTCCTTTCAGGGCTaGCCCACACCGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLLSFQG*PTPSTP
Trigger: GGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAGTGGGTGCAGGCAAGTaGCAAGGCCAGGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPVGAGK*QGQEPV
Trigger: GACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCAC...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTATGCCTCATGGTGGGTaGAGGCAAGTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAMPHGG*RQVPRP
Trigger: TGGCCTTGGCACTTGCCTGCACCCACCATGAGGCAT...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGCCCTTGCTCTGCCCTaGTCCATGCCTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLALALP*SMPHGG
Trigger: CCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTGCTCAGGTGTGTGCTaGCAGGGGGCCGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVCSGVC*QGADGV
Trigger: AACCCCATCGGCCCCCTGCCAGCACACACCTGAGCA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGGCCCCAGCTAGGTaGCTGAGGGGGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPWAPAR*LRGPCP
Trigger: AGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCCCACCCGCCCTGTCCTaGAGCTGCTGTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGPPALS*SCCPKR
Trigger: CCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGG...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCAGATGGGGTTTGGGTaGTCAGCCCACCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLQMGFG*SAHPPC
Trigger: ACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTTGCAGTCGGCAGTACTaGCAGCGGTTCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPCSRQY*QRFRVT
Trigger: GGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCA...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTTGAGGAGGGTGATCTaGTCGGCGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQALRRVI*SAMVRV
Trigger: CACCCTCACCATCGCCGACCAGATCACCCTCCTCAA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGTCACGGGGAGTGGGTaGCCGGGCTGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPVTGSG*PGCFCW
Trigger: CCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGAC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAAGGGCTGTGTCCATGTaGCGTGGGCGGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPRAVSM*RGRSRG
Trigger: TCCCCGTGACCGCCCACGCCACATGGACACAGCCCT...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAAGGTGGGGGCAGGGCTaGTGCGGGGTCACATGGTCG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKRWGQG*CGVTWS
Trigger: CGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTCTCCATCTTCAGCGTaGTCACCCGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSPSSA*SPAQPP
Trigger: AGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGTCTCCATCTTCAGCGTaGTCACCCGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGSPSSA*SPAQPP
Trigger: AGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCCAACATTTCCTGGATaGGAGGCGGCATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAPTFPG*EAAWSP
Trigger: CGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGG...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCCAACATTTCCTGGATaGGAGGCGGCATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLPTFPG*EAAWSP
Trigger: CGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTCCAACATTTCCTGGATaGGAGGCGGCATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPPTFPG*EAAWSP
Trigger: CGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGG...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp GGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCAGGGAGCAATGGCTTGTaGGTTCTGAGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGCRQVPRPGACPFRAAPGSNGL*VLRMGE
Trigger: CTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCC...TGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCCCTGTCCTGGAGCTaGTGTCCAAAGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHALSWS*CPKRAG
Trigger: GCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGAGCAAGGCTTGTAGATaGGGGGTAGAGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVASKACR*GVEGVA
Trigger: CGCCACCCCCTCTACCCCGCATCTACAAGCCTTGCT...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR GCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGTGAAGCCGGGCAGCTaGTTGGCGAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAVKPGS*LANSTV
Trigger: GACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCAC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCGGGCGTGTACCGCGTaGAGATCCGCAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCRACTA*RSAGSG
Trigger: TCCTGATCCTGCGGATCTGCACGCGGTACACGCCCG...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATCGGGCGTGTACCGCGTaGAGATCCGCAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHRACTA*RSAGSG
Trigger: TCCTGATCCTGCGGATCTGCACGCGGTACACGCCCG...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAATCCAGCAGCGGCTCCTaGAGCATGTCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKSSSGS*SMSTRS
Trigger: GGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGTGGGTGCAGGCAAGTaGCAAGGCCAGGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPVGAGK*QGQEPV
Trigger: GACAGGCTCCTGGCCTTGGCACTTGCCTGCACCCAC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGCCCTTGCTCTGCCCTaGTCCATGCCTCATGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPALALP*SMPHGG
Trigger: CCCACCATGAGGCATGGAGCAGGGCAGAGCAAGGGC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATCCACCCGCCCTGTCCTaGAGCTGCTGTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHPPALS*SCCPKR
Trigger: CCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGG...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGGGCCCAGATGGGGTTTaGGTGGTCAGCCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWGPDGV*VVSPPA
Trigger: GGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCC...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGAGGAGCTGCTGTTGCTaGCCATGCCAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVRSCCC*PCQAAT
Trigger: TGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCT...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAAGGAGCTGCTGTTGCTaGCCATGCCAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPRSCCC*PCQAAT
Trigger: TGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCT...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGGCTGGTGCTGGAGAGTaGTCAGAGCGCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQAGAGE*SERLAG
Trigger: CCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGC...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCACTGGAAGCTGGTGCTaGAGAGTGGTCAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGTGSWC*RVVRAP
Trigger: AGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGT...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTGCAGTCGGCAGTACTaGCAGCGGTTCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCCSRQY*QRFRVT
Trigger: GGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCAGTCGGCAGTACTaGCAGCGGTTCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPCSRQY*QRFRVT
Trigger: GGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGTGTATTTGCCCAGCTaGCAGAGGGCAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAVYLPS*QRAGKV
Trigger: AACCTTCCCTGCCCTCTGCCAGCTGGGCAAATACAC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTCCAGGGGCAGCAGCTaGTTGGCGAAGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSRGSS*LAKAKT
Trigger: GGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTCCAGGGGCAGCAGCTaGTTGGCGAAGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLSRGSS*LAKAKT
Trigger: GGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGTCACGGGGAGTGGGTaGCCGGGCTGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKVTGSG*PGCFCW
Trigger: CCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGAC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTAGGGCTGTGTCCATGTaGCGTGGGCGGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRRAVSM*RGRSRG
Trigger: TCCCCGTGACCGCCCACGCCACATGGACACAGCCCT...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGCCTCACTCAGTTCCTaGCCTCGGCCTCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLASLSS*PRPLTS
Trigger: TGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACACCCAGTGGTCAGGCGGGGGAGCCAAGTCCTaGCGTTTGCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: QEPVLSGLPHTVHTQWSGGGAKS*RLLVMK
Trigger: CTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCC...GCCTGACCACTGGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGAGGGAGAAAGGGGCTaGCGGCTTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHEGERG*RLLQWE
Trigger: CTCCCACTGGAGAAGCCGCCAGCCCCTTTCTCCCTC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGCTGCTCCATGCCTCATaGTGGGTGCAGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGLLHAS*WVQASA
Trigger: GGCACTTGCCTGCACCCACCATGAGGCATGGAGCAG...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCCATGTGTGTGGTGTCTaGGGGCCCTATGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGHVCGV*GPYGGA
Trigger: AGCACCCCCATAGGGCCCCCAGACACCACACACATG...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGGCAGGCCAGGGAAATaGAGGAACTCGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAGRPGK*RNSGQV
Trigger: CACTTGGCCCGAGTTCCTCCATTTCCCTGGCCTGCC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGCCTAACCCGGCGCCCTaGTGCTGCTCGGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWPNPAP*CCSASG
Trigger: CCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGG...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGCGGGGCCAAGTGTTTaGCACCCGGGTGTGACATTG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAAGPSV*HPGVTL
Trigger: CAATGTCACACCCGGGTGCCAAACACTTGGCCCCGC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR TCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTCTCCATCTTCAGCGTaGTCACCCGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCSPSSA*SPAQPP
Trigger: AGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATCTCCATCTTCAGCGTaGTCACCCGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPSPSSA*SPAQPP
Trigger: AGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGTGTCGGGCAGGAGCTaGTGTTGCTGGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPVSGRS*CCWPCQ
Trigger: TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACAC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAAGCAAGGCTTGTAGATaGGGGGTAGAGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPSKACR*GVEGVA
Trigger: CGCCACCCCCTCTACCCCGCATCTACAAGCCTTGCT...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR GCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTGTGAAGCCGGGCAGCTaGTTGGCGAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCVKPGS*LANSTV
Trigger: GACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCAC...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAACGGGCGTGTACCGCGTaGAGATCCGCAGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKRACTA*RSAGSG
Trigger: TCCTGATCCTGCGGATCTGCACGCGGTACACGCCCG...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTCCACCCGGTCCGGCTaGTCCAGGTCCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVSTRSG*SRSWRS
Trigger: AGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGA...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAACCCAACAGTAACAGGTaGACCCACGGGCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKPNSNR*THGLQG
Trigger: CCCCTGGAGCCCGTGGGTGCACCTGTTACTGTTGGG...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCTAATCTCAGTCTCCTaGAGCCCCCACCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLLISVS*SPHPSW
Trigger: CCAGCTAGGGTGGGGGCTCCAGGAGACTGAGATTAG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAACAGATGGGGTTTGGGTaGTCAGCCCACCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKQMGFG*SAHPPC
Trigger: ACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTG...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGACTGGAAGCTGGTGCTaGAGAGTGGTCAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVATGSWC*RVVRAP
Trigger: AGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGT...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGTGGCGAGGGAGGGCTaGGCACTATCTCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGVAREG*ALSLQN
Trigger: GTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCAGGGAAGGTTTCCTaGTGCGCTTTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGAGKVS*CALRTF
Trigger: GAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTTGAGGAGGGTGATCTaGTCGGCGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGLRRVI*SAMVRV
Trigger: CACCCTCACCATCGCCGACCAGATCACCCTCCTCAA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTTGAGGAGGGTGATCTaGTCGGCGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVLRRVI*SAMVRV
Trigger: CACCCTCACCATCGCCGACCAGATCACCCTCCTCAA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTTGAGGAGGGTGATCTaGTCGGCGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVALRRVI*SAMVRV
Trigger: CACCCTCACCATCGCCGACCAGATCACCCTCCTCAA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCCTCACTCAGTTCCTaGCCTCGGCCTCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHASLSS*PRPLTS
Trigger: TGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGAAGATGTGGTGAGCTaGGCAGAGGGGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAEDVVS*AEGCLD
Trigger: ATCAAGACACCCCTCTGCCCAGCTCACCACATCTTC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGGGGGAGCCAAGTCCTaGCGTTTGCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGGGAKS*RLLVMK
Trigger: CTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTGACATGAAAGGAGAGTaGGGGCCCCTTCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCDMKGE*GPLPSH
Trigger: GTGGCTCGGAAGGGGCCCCCACTCTCCTTTCATGTC...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTGAGGGAGAAAGGGGCTaGCGGCTTCTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWREGERG*RLLQWE
Trigger: CTCCCACTGGAGAAGCCGCCAGCCCCTTTCTCCCTC...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGCTCCATGCCTCATGGTaGGTGCAGGCAAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVLHASW*VQASAK
Trigger: CTTGGCACTTGCCTGCACCCACCATGAGGCATGGAG...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCACTCCATGCCTCATGGTaGGTGCAGGCAAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPLHASW*VQASAK
Trigger: CTTGGCACTTGCCTGCACCCACCATGAGGCATGGAG...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTCAGAACTGCTGCTCTaGGTCTCAATGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVASELLL*VSMALP
Trigger: GGGCAGCGCCATTGAGACCCAGAGCAGCAGTTCTGA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR TCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGGTCAAGCAGTTCTGTaGGCTGGCACTTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVGQAVL*AGTFPG
Trigger: CCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTTCTCCATCTTCAGCGTaGTCACCCGCTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRSPSSA*SPAQPP
Trigger: AGGGGGCTGAGCGGGTGATCACGCTGAAGATGGAGA...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGAGCAGGCAGTCCACTaGGGGCCCAGGCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCEQAVH*GPRPLS
Trigger: GGACAGAGGCCTGGGCCCTCAGTGGACTGCCTGCTC...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGGAGCAATGGCTTGTaGGTTCTGAGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHGSNGL*VLRMGE
Trigger: CTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGGGAGCAATGGCTTGTaGGTTCTGAGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPGSNGL*VLRMGE
Trigger: CTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGGGTACCCATTGAGGTaGCCGCCCCCAGGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCGYPLR*PPPGVG
Trigger: CCCGACACCTGGGGGCGGGCACCTCAATGGGTACCC...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTAGCAAGGCTTGTAGATaGGGGGTAGAGGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRSKACR*GVEGVA
Trigger: CGCCACCCCCTCTACCCCGCATCTACAAGCCTTGCT...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR GCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGGGAAGGTTTCCTGGTaGGCTTTGCGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGGKVSW*ALRTFS
Trigger: TGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCC...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGGGAAGGTTTCCTGGTaGGCTTTGCGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLGKVSW*ALRTFS
Trigger: TGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGGGAAGGTTTCCTGGTaGGCTTTGCGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAGKVSW*ALRTFS
Trigger: TGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGAGTGGGTGGCCGGGCTaGTTCTGTTGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVSGWPG*FCWSWG
Trigger: GCCCCAGCTCCAACAGAAGCAGCCCGGCCACCCACT...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCTAATCTCAGTCTCCTaGAGCCCCCACCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCLISVS*SPHPSW
Trigger: CCAGCTAGGGTGGGGGCTCCAGGAGACTGAGATTAG...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAAGGAGCTGCTGTTGCTaGCCATGCCAAGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKRSCCC*PCQAAT
Trigger: TGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCT...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTGCTCTGGGTCTCAATaGTGGCTGGGGATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCCSGSQ*WLGMVC
Trigger: GCACACCATCCCCAGCCACCATTGAGACCCAGAGCA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGTCAGAACTGCTGCTCTaGGTCTCAATGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGSELLL*VSMVAG
Trigger: CCCAGCCACCATTGAGACCCAGAGCAGCAGTTCTGA...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTGTGGCGAGGGAGGGCTaGGCACTATCTCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCVAREG*ALSLQN
Trigger: GTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCAGGGAAGGTTTCCTaGTGCGCTTTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHAGKVS*CALRTF
Trigger: GAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGTGTATTTGCCCAGCTaGCAGAGGGCAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLVYLPS*QRAGKV
Trigger: AACCTTCCCTGCCCTCTGCCAGCTGGGCAAATACAC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVCVHVA*AVTGSG
Trigger: CCCACTCCCCGTGACCGCCCACGCCACATGGACACA...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTGGTGCGGGGTCACATaGTCGGTAGAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGWCGVT*SVERQR
Trigger: TCTCTGCCTTTCTACCGACCATGTGACCCCGCACCA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTTGAGGTTCCCCAGCTaGGGAGCAATGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVLRFPS*GAMACE
Trigger: CTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTACCTGGGGTTGGTATaGCAGGGTATGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVYLGLV*QGMYRG
Trigger: CCCCCTGTACATACCCTGCCATACCAACCCCAGGTA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGGCAGCTCGGGCCCCTaGCCAGCCCCTTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAGSSGP*PAPSQW
Trigger: CCACTGTGAAGGGGCTGGCCAGGGGCCCGAGCTGCC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTTGTCTGGGGGCCCTATaGGGGTGCTGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSCLGAL*GCWWLR
Trigger: CCTCAGCCACCAGCACCCCCATAGGGCCCCCAGACA...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGAGTGTCCAGGCCCTCTaGGTTCTCCAACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVASVQAL*VLQHFL
Trigger: CAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACT...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGGGAGCAATGGCTTGTaGGTTCTGAGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKGSNGL*VLRMGE
Trigger: CTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTCTCCGCCAGTCCCGGTaGAAAGCAGGGAAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRLRQSR*KAGKLC
Trigger: ACACAACTTCCCTGCTTTTCACCGGGACTGGCGGAG...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR GCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGCCCTGTCCTGGAGCTaGTGTCCAAAGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVALSWS*CPKRAG
Trigger: GCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGGCAGGAGCTGCTGTTaGTGGCCATGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCGRSCC*WPCQAA
Trigger: GGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCC...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTATGCCTCATGGTGGGTaGAGGCAAGTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRMPHGG*RQVPRP
Trigger: TGGCCTTGGCACTTGCCTGCACCCACCATGAGGCAT...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTCCGGGGCCCTTGCTCTaGCCTGCTCCATGCCTCATG +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCPGPLL*PAPCLM
Trigger: CATGAGGCATGGAGCAGGGCAGAGCAAGGGCCCCGG...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTCCCAACAGTAACAGGTaGACCCACGGGCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSPNSNR*THGLQG
Trigger: CCCCTGGAGCCCGTGGGTGCACCTGTTACTGTTGGG...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGCCGGGTGTGACATTGTaGAGCTCGGACGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWPGVTL*SSDAVS
Trigger: CGACACAGCGTCCGAGCTGCACAATGTCACACCCGG...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCAAGAGCCGGTCCTTTaGTCAAGCAGTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLQEPVL*SSSSVS
Trigger: GCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGCTGGTGCTGGAGAGTaGTCAGAGCGCCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAAGAGE*SERLAG
Trigger: CCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVPLTGS*CWRVVR
Trigger: TCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGG...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAPLTGS*CWRVVR
Trigger: TCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGG...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGTCTGGGTCTCAATGGTaGCTGGGGATGGTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GQGWCGVTWSVERQRKAGSGSQW*LGMVCY
Trigger: ATAGCACACCATCCCCAGCCACCATTGAGACCCAGA...CCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTCAGAACTGCTGCTCTaGGTCTCAATGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCSELLL*VSMVAG
Trigger: CCCAGCCACCATTGAGACCCAGAGCAGCAGTTCTGA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTGTGGCGAGGGAGGGCTaGGCACTATCTCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRVAREG*ALSLQN
Trigger: GTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCAGGGAAGGTTTCCTaGTGCGCTTTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKAGKVS*CALRTF
Trigger: GAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGTATTTGCCCAGCTaGCAGAGGGCAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHVYLPS*QRAGKV
Trigger: AACCTTCCCTGCCCTCTGCCAGCTGGGCAAATACAC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAATTGAGGAGGGTGATCTaGTCGGCGATGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKLRRVI*SAMVRV
Trigger: CACCCTCACCATCGCCGACCAGATCACCCTCCTCAA...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGGCTGCTCCAGGTCCTaGCGGTCTCCGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCGCSRS*RSPQMR
Trigger: CCTCATCTGCGGAGACCGCCAGGACCTGGAGCAGCC...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTGGTGCGGGGTCACATaGTCGGTAGAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCWCGVT*SVERQR
Trigger: TCTCTGCCTTTCTACCGACCATGTGACCCCGCACCA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGTGCGGGGTCACATaGTCGGTAGAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPWCGVT*SVERQR
Trigger: TCTCTGCCTTTCTACCGACCATGTGACCCCGCACCA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGGCCTCACTCAGTTCCTaGCCTCGGCCTCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQASLSS*PRPLTS
Trigger: TGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGC...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGAAGATGTGGTGAGCTaGGCAGAGGGGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVEDVVS*AEGCLD
Trigger: ATCAAGACACCCCTCTGCCCAGCTCACCACATCTTC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTCCAGCTGGGGAGCAATaGCTTGTGAGTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPPAGEQ*LVSSED
Trigger: ATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGG...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTTGAGGTTCCCCAGCTaGGGAGCAATGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCLRFPS*GAMACE
Trigger: CTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATTGAGGTTCCCCAGCTaGGGAGCAATGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPLRFPS*GAMACE
Trigger: CTCACAAGCCATTGCTCCCCAGCTGGGGAACCTCAA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGGACATGAAAGGAGAGTaGGGGCCCCTTCCGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWDMKGE*GPLPSH
Trigger: GTGGCTCGGAAGGGGCCCCCACTCTCCTTTCATGTC...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGCCGAGGAGCCAGGTCTaGGAAAACTCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVPRSQV*ENSVPG
Trigger: CCCCGGGACAGAGTTTTCCCAGACCTGGCTCCTCGG...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGGGCAGGCCAGGGAAATaGAGGAACTCGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWGRPGK*RNSGQV
Trigger: CACTTGGCCCGAGTTCCTCCATTTCCCTGGCCTGCC...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGTCGTTTCTCACAGTaGCTGGGGATGGTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGGRFSQ*LGMVCY
Trigger: ATAGCACACCATCCCCAGCCACTGTGAGAAACGACC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR TCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGCACCGGGTACCCATTaGGGTGCCCGCCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGAPGTH*GARPQV
Trigger: CACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTAGTGTCCAGGCCCTCTaGGTTCTCCAACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCSVQAL*VLQHFL
Trigger: CAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACT...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATAGTGTCCAGGCCCTCTaGGTTCTCCAACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHSVQAL*VLQHFL
Trigger: CAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACT...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCTCAATGGAGTGGTTTaGGCCATTCCAAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVALNGVV*AIPKRS
Trigger: ACTCCGCTTTGGAATGGCTCAAACCACTCCATTGAG...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR GCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVSLQNC*SGSQWW
Trigger: CCACCATTGAGACCCAGAGCAGCAGTTCTGAAGAGA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLSLQNC*SGSQWW
Trigger: CCACCATTGAGACCCAGAGCAGCAGTTCTGAAGAGA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR GCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGGGAAGGTTTCCTGGTaGGCTTTGCGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKGKVSW*ALRTFS
Trigger: TGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR GCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCATCCAGCAGCGGCTCCTaGAGCATGTCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCASSSGS*SMSTRS
Trigger: GGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGCCCTATGGGGGTaGTGGTGGCTGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGGALWG*WWLRPG
Trigger: CCCCGGCCTCAGCCACCAGCACCCCCATAGGGCCCC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAAGCAGTTCTGTGAGCTaGCACTTTTCCTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPSSSVS*HFSWEG
Trigger: ACCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCT...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCACAAGAGCCGGTCCTTTaGTCAAGCAGTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPQEPVL*SSSSVS
Trigger: GCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTG...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCPLTGS*CWRVVR
Trigger: TCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGG...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGTCTCAATGGTGGCTaGGGATGGTGTGCTATATCC +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHGLNGG*GWCAIS
Trigger: GGATATAGCACACCATCCCCAGCCACCATTGAGACC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGTGCTCTGGGTCTCAATaGTGGCTGGGGATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWCSGSQ*WLGMVC
Trigger: GCACACCATCCCCAGCCACCATTGAGACCCAGAGCA...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGGTGGCGAGGGAGGGCTaGGCACTATCTCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQVAREG*ALSLQN
Trigger: GTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTTCCAGGGGCAGCAGCTaGTTGGCGAAGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSSRGSS*LAKAKT
Trigger: GGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGA...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCATTCTCCAACATTTCCTaGATGAGAGGCGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPFSNIS*MRGGME
Trigger: CTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAA...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTTCTCCAACATTTCCTaGATGAGAGGCGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAFSNIS*MRGGME
Trigger: CTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAA...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGCCGTCTAGAGTCTCGTaGCGTCCGAGGCAGAGTACA +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWPSRVS*RPRQST
Trigger: TGTACTCTGCCTCGGACGCCACGAGACTCTAGACGG...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CCA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGTTTCTCACAGTGGCTaGGGATGGTGTGCTATATCC +
Preference number: 4 (lower is better)
Translates to: PGLGKLCPGALALPCSMPVSHSG*GWCAIS
Trigger: GGATATAGCACACCATCCCCAGCCACTGTGAGAAAC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR TCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTCCAACATTTCCTGGATaGGAGGCGGCATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCPTFPG*EAAWSP
Trigger: CGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGG...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGCTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLLSLQN*CSGSQW
Trigger: CCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAG...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCCTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGLSLQN*CSGSQW
Trigger: CCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAG...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR GCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGTCCACCCGGTCCGGCTaGTCCAGGTCCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGSTRSG*SRSWRS
Trigger: AGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGA...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAATCCACCCGGTCCGGCTaGTCCAGGTCCTGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGESTRSG*SRSWRS
Trigger: AGACCGCCAGGACCTGGAGCAGCCGGACCGGGTGGA...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGCCTGTAGGCCCGTCCTaGGGGGTAAGGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGPVGPS*GVRRGH
Trigger: GTGCCCCCTCCTTACCCCGCAGGACGGGCCTACAGG...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSLQNC*SGSQWS
Trigger: ACTCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAAGCGAGCACAGCGTCTaGCCTAACCCGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGESEHSV*PNPAPW
Trigger: CCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATAGCAGTTCTGTGAGCTaGCACTTTTCCTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHSSSVS*HFSWEG
Trigger: ACCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCT...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGCTAATCTCAGTCTCCTaGAGCCCCCACCCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVLISVS*SPHPSW
Trigger: CCAGCTAGGGTGGGGGCTCCAGGAGACTGAGATTAG...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPAISTN*KLVLES
Trigger: ACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGC...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCAATGGTGGCTGGGGATaGTGTGCTATATCCACTAAC +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGNGGWG*CAISTN
Trigger: GTTAGTGGATATAGCACACCATCCCCAGCCACCATT...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGAATGGTGGCTGGGGATaGTGTGCTATATCCACTAAC +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVANGGWG*CAISTN
Trigger: GTTAGTGGATATAGCACACCATCCCCAGCCACCATT...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGACATGTGGGGGCGGCTaGGCCTCCGCTTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGTCGGG*ASASAR
Trigger: ACGTGCGGAAGCGGAGGCCCAGCCGCCCCCACATGT...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTTCTCCAACATTTCCTaGATGAGAGGCGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCFSNIS*MRGGME
Trigger: CTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGAAGATGTGGTGAGCTaGGCAGAGGGGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKEDVVS*AEGCLD
Trigger: ATCAAGACACCCCTCTGCCCAGCTCACCACATCTTC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGTACCTGGGGTTGGTATaGCAGGGTATGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWYLGLV*QGMYRG
Trigger: CCCCCTGTACATACCCTGCCATACCAACCCCAGGTA...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGCGAGAATTAATACCTaGGGTTGGTATGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLARINT*GWYGRV
Trigger: TACCCTGCCATACCAACCCCAGGTATTAATTCTCGC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCGAGAATTAATACCTaGGGTTGGTATGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGARINT*GWYGRV
Trigger: TACCCTGCCATACCAACCCCAGGTATTAATTCTCGC...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGCGAGAATTAATACCTaGGGTTGGTATGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAARINT*GWYGRV
Trigger: TACCCTGCCATACCAACCCCAGGTATTAATTCTCGC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGCCCTATGGGGGTGCTaGTGGCTGAGGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGALWGC*WLRPGV
Trigger: CACCCCCGGCCTCAGCCACCAGCACCCCCATAGGGC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGCAAGAGGTCCGAGCTaGGAAGTCCTGCGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGARGPS*EVLRAA
Trigger: GGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CCA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTGGGTCTCAATGGAGTaGTTTGAGCCATTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVWVSME*FEPFQS
Trigger: GCTTTGGAATGGCTCAAACCACTCCATTGAGACCCA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CCA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCTCAGAACTGCTGCTCTaGGTCTCAATGGAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGSELLL*VSMEWF
Trigger: AAACCACTCCATTGAGACCCAGAGCAGCAGTTCTGA...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR TCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGGTCAAGCAGTTCTGTaGGCTGGCACTTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVGQAVL*AGTFPG
Trigger: CCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGATGGCTTGTGAGTTCTaGGGATGGGGGAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVMACEF*GWGSQV
Trigger: GACTTGGCTCCCCCATCCTCAGAACTCACAAGCCAT...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGGCACAGGGACATaGAAGGAGAGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGGGTGT*KESGGP
Trigger: GGGGCCCCCACTCTCCTTTCATGTCCCTGTGCCCCC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGTGAAGCCGGGCAGCTaGTTGGCGAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAVKPGS*LANSTV
Trigger: GACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCAC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAATCCAGCAGCGGCTCCTaGAGCATGTCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGESSSGS*SMSTRS
Trigger: GGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGAAGGTCCCCAGTACTaGCCGGGAGGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGEGPQY*PGGQVG
Trigger: CCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAATGGGCCCCAGCTAGGTaGCTGAGGGGGCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEWAPAR*LRGPCP
Trigger: AGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCA...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGGGGGCCAGGTGGGTTaGGGGATGTCTCAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEGGQVG*GMSQEP
Trigger: CGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGAGTGGTCAGAGCGCCTaGCGGGGAGAGTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGSGQSA*RGESTQ
Trigger: CTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACT...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPAISTN*KLVLES
Trigger: ACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGTCTGGGTCTCAATGGTaGCTGGGGATGGTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWSGSQW*LGMVCY
Trigger: ATAGCACACCATCCCCAGCCACCATTGAGACCCAGA...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGTGTATTTGCCCAGCTaGCAGAGGGCAGGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVVYLPS*QRAGKV
Trigger: AACCTTCCCTGCCCTCTGCCAGCTGGGCAAATACAC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAATTCTCCAACATTTCCTaGATGAGAGGCGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKFSNIS*MRGGME
Trigger: CTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAA...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTTTCTCCAACATTTCCTaGATGAGAGGCGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRFSNIS*MRGGME
Trigger: CTCCATGCCGCCTCTCATCCAGGAAATGTTGGAGAA...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGTCACGGGGAGTGGGTaGCCGGGCTGCTTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEVTGSG*PGCFCW
Trigger: CCAACAGAAGCAGCCCGGCCACCCACTCCCCGTGAC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGAGGGCTGTGTCCATGTaGCGTGGGCGGTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGRAVSM*RGRSRG
Trigger: TCCCCGTGACCGCCCACGCCACATGGACACAGCCCT...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGCCAGCTGGGGAGCAATaGCTTGTGAGTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWPAGEQ*LVSSED
Trigger: ATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGG...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGCGAGAATTAATACCTaGGGTTGGTATGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHARINT*GWYGRV
Trigger: TACCCTGCCATACCAACCCCAGGTATTAATTCTCGC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCACATGTGTGTGGTGTCTaGGGGCCCTATGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAHVCGV*GPYGGA
Trigger: AGCACCCCCATAGGGCCCCCAGACACCACACACATG...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
3UTR CAA 72 bp GTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTaGTGTGTGTGCGCACGCGCATGTGTGTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VCRPIYCPVCVC*CVCARACVWCL
Trigger: CAGACACCACACACATGCGCGTGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPRDTLF*AVVRSV
Trigger: TACACTACGAACAACAGCTCAGAACAACGTGTCTCT...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR TCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGCCTGGCCTCGGCCTCTaGCGTCAGCCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQPGLGL*RQPRLW
Trigger: CCACAGCCTGGGCTGACGTCAGAGGCCGAGGCCAGG...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCATGCTGTTGCTGGCCATaGCAAGCGGCCACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCACCCWP*QAATVR
Trigger: TCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCA...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGGGAAGGTTTCCTGGTaGGCTTTGCGCACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCGKVSW*ALRTFS
Trigger: TGAGAAGGTGCGCAAAGCGCACCAGGAAACCTTCCC...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGTCCAGCAGCGGCTCCTaGAGCATGTCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGSSSGS*SMSTRS
Trigger: GGACCGGGTGGACATGCTGCAGGAGCCGCTGCTGGA...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGTGTCCAAGGAGTCGCTaGCTCCTCCCTCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGCPRSR*LLPPRP
Trigger: GGGACGGGGAGGGAGGAGGCAGCGACTCCTTGGACA...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGCAAGAGCCGGTCCTTTaGTCAAGCAGTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVQEPVL*SSSSVS
Trigger: GCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTG...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGCVHVA*AVTGSG
Trigger: CCCACTCCCCGTGACCGCCCACGCCACATGGACACA...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTTACCTGGGGTTGGTATaGCAGGGTATGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: NGGTRAKCVSAHLLSSVCYLGLV*QGMYRG
Trigger: CCCCCTGTACATACCCTGCCATACCAACCCCAGGTA...ACACACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGATTAATACCTGGGGTTaGTATGGCAGGGTATGTACA +
Preference number: 4 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLINTWG*YGRVCT
Trigger: TGTACATACCCTGCCATACCAACCCCAGGTATTAAT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGGAGCCCCTTCTCTaGGAGCAAACAGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGGEPLL*EQTGPV
Trigger: AACCGGGCCTGTTTGCTCCCAGAGAAGGGGCTCCCC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR TCA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRRDTLF*AVVRSV
Trigger: TACACTACGAACAACAGCTCAGAACAACGTGTCTCT...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGTTTGGCACCCGGGTGTaGCATTGTGCAGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGFGTRV*HCAART
Trigger: CGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAA...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGTGTCGGGCAGGAGCTaGTGTTGCTGGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEVSGRS*CCWPCQ
Trigger: TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACAC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR GCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGTGAAGCCGGGCAGCTaGTTGGCGAACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEVKPGS*LANSTV
Trigger: GACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTTCAC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGAAGGTCCCCAGTACTaGCCGGGAGGGCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQEGPQY*PGGQVG
Trigger: CCCCACCTGCCCTCCCGGGCAGTACTGGGGACCTTC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGATGCCACTCCTAGATaGGCCCCAGCTAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGDATPR*APARWL
Trigger: CAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATC...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGCCACCCGCCCTGTCCTaGAGCTGCTGTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGPPALS*SCCPKR
Trigger: CCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGG...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGTCCAGGGGCAGCAGCTaGTTGGCGAAGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGSRGSS*LAKAKT
Trigger: GGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGA...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCATGGTGCGGGGTCACATaGTCGGTAGAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAWCGVT*SVERQR
Trigger: TCTCTGCCTTTCTACCGACCATGTGACCCCGCACCA...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCATACCTGGGGTTGGTATaGCAGGGTATGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAYLGLV*QGMYRG
Trigger: CCCCCTGTACATACCCTGCCATACCAACCCCAGGTA...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTCTCCCAGGGAAGCCTaGCGGGGCCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQSPREA*RGPGTQ
Trigger: CTGAGTTCCCGGGCCCCGCCAGGCTTCCCTGGGAGA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR TCA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWRDTLF*AVVRSV
Trigger: TACACTACGAACAACAGCTCAGAACAACGTGTCTCT...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTGGGGGCAGGGCTGGTaGGGGGTCACATGGTCGGTA +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQWGQGW*GVTWSV
Trigger: TACCGACCATGTGACCCCGCACCAGCCCTGCCCCCA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGCCAGGTGGGTTaGGGGATGTCTCAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQGGQVG*GMSQEP
Trigger: CGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAACTGGAAGCTGGTGCTaGAGAGTGGTCAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGETGSWC*RVVRAP
Trigger: AGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVAISTN*KLVLES
Trigger: ACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGC...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAGGTCTCAATGGTGGCTaGGGATGGTGTGCTATATCC +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAGLNGG*GWCAIS
Trigger: GGATATAGCACACCATCCCCAGCCACCATTGAGACC...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGCTGCTCCATGCCTCATaGTGGGTGCAGGCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGLLHAS*WVQASA
Trigger: GGCACTTGCCTGCACCCACCATGAGGCATGGAGCAG...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGGTCAAGCAGTTCTGTaGGCTGGCACTTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEGQAVL*AGTFPG
Trigger: CCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGATGGCTTGTGAGTTCTaGGGATGGGGGAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGMACEF*GWGSQV
Trigger: GACTTGGCTCCCCCATCCTCAGAACTCACAAGCCAT...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAGACGCTGTGTCGGAATaGGACACCGGCTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGEDAVSE*DTGLCH
Trigger: ATGACACAAGCCGGTGTCTCATTCCGACACAGCGTC...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR GCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGCTGTCCTTTCAGGGCTaGCCCACACCGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQLSFQG*PTPSTP
Trigger: GGGTGTGGACGGTGTGGGGCAGCCCTGAAAGGACAG...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTGCAGTCGGCAGTACTaGCAGCGGTTCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQCSRQY*QRFRVT
Trigger: GGTGACCCGGAACCGCTGCCAGTACTGCCGACTGCA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGCAGGGAAGGTTTCCTaGTGCGCTTTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGAGKVS*CALRTF
Trigger: GAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGGGAGCCAAGTCCTaGCGTTTGCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGGGAKS*RLLVMK
Trigger: CTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCC...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGCCGAGGAGCCAGGTCTaGGAAAACTCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQPRSQV*ENSVPG
Trigger: CCCCGGGACAGAGTTTTCCCAGACCTGGCTCCTCGG...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGCCAACATTTCCTGGATaGGAGGCGGCATGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQPTFPG*EAAWSP
Trigger: CGGGCTCCATGCCGCCTCTCATCCAGGAAATGTTGG...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAAGTGTCCAGGCCCTCTaGGTTCTCCAACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGESVQAL*VLQHFL
Trigger: CAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTCCAGGGGCAGCAGCTaGTTGGCGAAGGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQSRGSS*LAKAKT
Trigger: GGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGCAGGGAAGGTTTCCTaGTGCGCTTTGCGCACCTTC +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQAGKVS*CALRTF
Trigger: GAAGGTGCGCAAAGCGCACCAGGAAACCTTCCCTGC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGGAGCCAAGTCCTaGCGTTTGCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQGGAKS*RLLVMK
Trigger: CTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGCCAGCTGGGGAGCAATaGCTTGTGAGTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGPAGEQ*LVSSED
Trigger: ATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGG...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp CAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGCTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: QNQRELIPGVGMAGYVQGLSLQN*CSGSQW
Trigger: CCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAG...CCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR CCA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAATTAATACCTGGGGTTaGTATGGCAGGGTATGTACA +
Preference number: 4 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAINTWG*YGRVCT
Trigger: TGTACATACCCTGCCATACCAACCCCAGGTATTAAT...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR TCA 90 bp AACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGGGAAAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: NQRELIPGVGMAGYVQGERDTLF*AVVRSV
Trigger: TACACTACGAACAACAGCTCAGAACAACGTGTCTCT...TTCCCCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGAGTGTCCAGGCCCTCTaGGTTCTCCAACATTTCCTG +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQSVQAL*VLQHFL
Trigger: CAGGAAATGTTGGAGAACTCAGAGGGCCTGGACACT...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR GCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGTCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGCGC +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQSLQNC*SGSQWR
Trigger: GCGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGA...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGCCAGCTGGGGAGCAATaGCTTGTGAGTTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQPAGEQ*LVSSED
Trigger: ATCCTCAGAACTCACAAGCCATTGCTCCCCAGCTGG...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR TCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGRDTLF*AVVRSV
Trigger: TACACTACGAACAACAGCTCAGAACAACGTGTCTCT...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp ACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGGATTAATACCTGGGGTTaGTATGGCAGGGTATGTACA +
Preference number: 4 (lower is better)
Translates to: TKPARINTWGWYGRVCTGINTWG*YGRVCT
Trigger: TGTACATACCCTGCCATACCAACCCCAGGTATTAAT...CCCTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CCA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGATTAATACCTGGGGTTaGTATGGCAGGGTATGTACA +
Preference number: 4 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQINTWG*YGRVCT
Trigger: TGTACATACCCTGCCATACCAACCCCAGGTATTAAT...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS GCA 90 bp CGGGGTGCCAGCGAGCACAGCGTCTGCCCTAACCCGGCGCCCTGGTaGTGCTCGGCATCAGGGTGCGGGGTCCCGGGAGAGGAGCCGTCC +
Preference number: 5 (lower is better)
Translates to: RGASEHSVCPNPAPW*CSASGCGVPGEEPS
Trigger: GGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS GCA 90 bp GGTGCCAGCGAGCACAGCGTCTGCCCTAACCCGGCGCCCTGGTGCTaGTCGGCATCAGGGTGCGGGGTCCCGGGAGAGGAGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GASEHSVCPNPAPWC*SASGCGVPGEEPSR
Trigger: CCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS CCA 90 bp GTTCGGGGTGCCAGCGAGCACAGCGTCTGCCCTAACCCGGCGCCCTaGTGCTGCTCGGCATCAGGGTGCGGGGTCCCGGGAGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VRGASEHSVCPNPAP*CCSASGCGVPGEEP
Trigger: CGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS GCA 90 bp CAGCGGGGGAAGCAACCCGTTCGGGGTGCCAGCGAGCACAGCGTCTaGCCTAACCCGGCGCCCTGGTGCTGCTCGGCATCAGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: QRGKQPVRGASEHSV*PNPAPWCCSASGCG
Trigger: CCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS CCA 90 bp GCGGCGGCAGGAGGCGTAGGGCCGGGTCGCGCGGGGCCAAGTGTTTaGCACCCGGGTGTGACATTGTGCAGCTCGGACGCTGTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: AAAGGVGPGRAGPSV*HPGVTLCSSDAVSE
Trigger: TTCCGACACAGCGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAACACTTGGCCCCGCGCGACCCGGCCCTACGCCTCCTGCCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS GCA 90 bp GGTGCCCGCCCCCAGGTGTCGGGCAGGAGCTGCTGTTGCTGGCCATaGCAAGCGGCCACAGTCAGAAGGGAGGCAGACAGTCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GARPQVSGRSCCCWP*QAATVRREADSLAG
Trigger: CCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS-3UTR CAA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGGGCAGGAGCTGCTGTaGCTGGCCATGCCAAGCGGC +
Preference number: 5 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAGQELL*LAMPSG
Trigger: GCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTACCCGCTCAGCCCCCTaGGCGCTGATGCTTCGCAGG +
Preference number: 5 (lower is better)
Translates to: GPGASLSSWPRPLTSAQATRSAP*ALMLRR
Trigger: CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGT...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS GCA 90 bp GTACATCTTTCCCCTCGAAGGCAAGAGGTCCGAGCTGGGAAGTCCTaGGCGCCGCCCCCGTCACTCAGCCGGCGGCGCCATCCGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VHLSPRRQEVRAGKS*APPPSLSRRRHPSR
Trigger: TCTGCTCGGATGGCGCCGCCGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGAAAGATGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CAA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGGGCCCAGATGGGGTTaGGGTGGTCAGCCCACCCGC +
Preference number: 5 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVGPRWG*GGQPTR
Trigger: GCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS GCA 90 bp TTCTATCTTTCCCCTCGAAGGCAAGAGGTCCGAGCTGGGAAGTCCTaGGCGCCGCCCCCGTCACTCAGCCGGCGGCGCCATCCGAGCAGA +
Preference number: 5 (lower is better)
Translates to: FYLSPRRQEVRAGKS*APPPSLSRRRHPSR
Trigger: TCTGCTCGGATGGCGCCGCCGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGAAAGATAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579727.5
CDS CCA 90 bp CTACACTCTCGTACATCTTTCCCCTCGAAGGCAAGAGGTCCGAGCTaGGAAGTCCTGCGCGCCGCCCCCGTCACTCAGCCGGCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LHSRTSFPSKARGPS*EVLRAAPVTQPAAP
Trigger: TGGCGCCGCCGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGAAAGATGTACGAGAGTGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CAA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGGGCAGGAGCTGCTGTaGCTGGCCATGCCAAGCGGC +
Preference number: 5 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAGQELL*LAMPSG
Trigger: GCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGACCCGCTCAGCCCCCTaGGCGCTGATGCTTCGCAGG +
Preference number: 5 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLTRSAP*ALMLRR
Trigger: CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp GGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCACCCGCTCAGCCCCCTaGGCGCTGATGCTTCGCAGG +
Preference number: 5 (lower is better)
Translates to: GRKAEKSRGGGRGLCPCGTRSAP*ALMLRR
Trigger: CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGT...GCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS CCA 90 bp GGTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTGCTGCTCTaGGTCTCAATGGCGCTGCCCGTGACATCACCCGCTCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GGEGGLGTISSELLL*VSMALPVTSPARQP
Trigger: GGGCTGGCGAGCGGGTGATGTCACGGGCAGCGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR CAA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGGGCCCAGATGGGGTTaGGGTGGTCAGCCCACCCGC +
Preference number: 5 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKGPRWG*GGQPTR
Trigger: GCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGGCAGGAGCTGCTGTaGCTGGCCATGCCAAGCGGC +
Preference number: 5 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHGQELL*LAMPSG
Trigger: GCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTCAGAGCACTCGGGCTaGGGCACCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GPGASLSSWPRPLTSAQASEHSG*GTSFFF
Trigger: GAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGCACCCGGGTGTGACATaGTGCAGCTCGGACGCTGTG +
Preference number: 5 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAHPGVT*CSSDAV
Trigger: CACAGCGTCCGAGCTGCACAATGTCACACCCGGGTG...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS GCA 90 bp GTAGAGGGGGTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGCGTCCTTCCTCCTCCCGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: VEGVAREGWALSLQN*CSGSQWRPSSSRGE
Trigger: CTCTCCCCGGGAGGAGGAAGGACGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475125.1
CDS CCA 90 bp CCATGTCCTGTGATGCTGCTCAGGTGTGTGCTGGCAGGGGGCCGATaGGGTTCCCAGGAGAACCGGGGAAGCCCTCTCAGCTCGATTCAG +
Preference number: 5 (lower is better)
Translates to: PCPVMLLRCVLAGGR*GSQENRGSPLSSIQ
Trigger: CTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAGCAGCATCACAGGACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254066.10
CDS-3UTR CAA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTGTTTCCTGGTGCGCTTaGCGCACCTTCTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: GPGASLSSWPRPLTSAQAVSWCA*RTFSMS
Trigger: GCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAAC...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGGGCAGAGGGGTGTCTaGATGAACACGAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHGQRGV*MNTRPP
Trigger: TGGGGGCCTCGTGTTCATCAAGACACCCCTCTGCCC...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCACGCGGGGCCAAGTGTTaGGCACCCGGGTGTGACATT +
Preference number: 5 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPRGAKC*APGCDI
Trigger: AATGTCACACCCGGGTGCCAAACACTTGGCCCCGCG...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS-3UTR CAA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCATCAGAGCACTCGGGCTaGGGCACCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPSEHSG*GTSFFF
Trigger: GAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGA...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTCAGAGCACTCGGGCTaGGGCACCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLSEHSG*GTSFFF
Trigger: GAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGA...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp TGCCCTGCTCCATGCCTCATGGTGGGTGCAGGCAAGTGCCAAGGCCAGGAGCCTTCAGAGCACTCGGGCTaGGGCACCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CPAPCLMVGAGKCQGQEPSEHSG*GTSFFF
Trigger: GAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGA...AGGCTCCTGGCCTTGGCACTTGCCTGCACCCACCATGAGGCATGGAGCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp GGACCAGGGGCCTCACTCAGTTCCTGGCCTCGGCCTCTGACGTCAGCCCAGGCTTTGTTCGTAGTGTATTaGCCCAGCTGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GPGASLSSWPRPLTSAQALFVVY*PSWQRA
Trigger: TGCCCTCTGCCAGCTGGGCAAATACACTACGAACAA...AGCCTGGGCTGACGTCAGAGGCCGAGGCCAGGAACTGAGTGAGGCCCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS-3UTR CAA 90 bp GGTCACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGAAGCCGGGCAGCTGCTaGGCGAACTCCACAGTCTTA +
Preference number: 5 (lower is better)
Translates to: GHMVGRKAEKSRGGGRGLKPGSC*ANSTVL
Trigger: TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTT...CAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp GGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTGTGACCCGCTCAGCCCCCTaGGCGCTGATGCTTCGCAGG +
Preference number: 5 (lower is better)
Translates to: GNGGTRAKCVSAHLLSSVTRSAP*ALMLRR
Trigger: CCTGCGAAGCATCAGCGCCAAGGGGGCTGAGCGGGT...CACACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS GCA 90 bp ATGGTGGCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTGGTaGTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: MVAGDGVLYPLTGSW*WRVVRAPGGESPPS
Trigger: GCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000577646.5
CDS GCA 90 bp ACAGTGGCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTGGTaGTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: TVAGDGVLYPLTGSW*WRVVRAPGGESPPS
Trigger: GCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS CCA 90 bp CTCACAGTGGCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCACCC +
Preference number: 5 (lower is better)
Translates to: LTVAGDGVLYPLTGS*CWRVVRAPGGESPP
Trigger: GGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR CAA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATTCAGAGCACTCGGGCTaGGGCACCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHSEHSG*GTSFFF
Trigger: GAAGAAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGA...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGTTTCCTGGTGCGCTTaGCGCACCTTCTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: PGLGKLCPGALALPCSMPVSWCA*RTFSMS
Trigger: GCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAAC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp GTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGGTTTCCTGGTGCGCTTaGCGCACCTTCTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: VERQRKAGAEGEGCVHVAVSWCA*RTFSMS
Trigger: GCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAAC...CGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp TGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATAAGCCGGGCAGCTGCTaGGCGAACTCCACAGTCTTA +
Preference number: 5 (lower is better)
Translates to: WSVERQRKAGAEGEGCVHKPGSC*ANSTVL
Trigger: TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTT...ATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTAAGCCGGGCAGCTGCTaGGCGAACTCCACAGTCTTA +
Preference number: 5 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCKPGSC*ANSTVL
Trigger: TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTT...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CCAGGTCTGGGAAAACTCTGTCCCGGGGCCCTTGCTCTGCCCTGCTCCATGCCTGCCAAGTCCTGGCGTTaGCTGGTGATGAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: PGLGKLCPGALALPCSMPAKSWR*LVMKMW
Trigger: CCACATCTTCATCACCAGCAAACGCCAGGACTTGGC...AGGCATGGAGCAGGGCAGAGCAAGGGCCCCGGGACAGAGTTTTCCCAGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp AGGCAAGTGCCAAGGCCAGGAGCCTGTCCTTTCAGGGCTGCCCCACACCGTCCAGCCAAGTCCTGGCGTTaGCTGGTGATGAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: RQVPRPGACPFRAAPHRPAKSWR*LVMKMW
Trigger: CCACATCTTCATCACCAGCAAACGCCAGGACTTGGC...TGGACGGTGTGGGGCAGCCCTGAAAGGACAGGCTCCTGGCCTTGGCACTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS CCA 90 bp GTGGCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTGGTGCTaGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCACCCAGCATA +
Preference number: 5 (lower is better)
Translates to: VAGDGVLYPLTGSWC*RVVRAPGGESPPSI
Trigger: TATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 90 bp TCAATGGTGGCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCACCC +
Preference number: 5 (lower is better)
Translates to: SMVAGDGVLYPLTGS*CWRVVRAPGGESPP
Trigger: GGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000577646.5
CDS CCA 90 bp CTGGGTCTCAATGGTGGCTGGGGATGGTGTGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LGLNGGWGWCAISTN*KLVLESGQSAWRGE
Trigger: CTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACCATTGAGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000577646.5
CDS-3UTR CAA 90 bp AGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTGTTGTTCGTAGTGTATTaGCCCAGCTGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RKAEKSRGGGRGLCPCGVLFVVY*PSWQRA
Trigger: TGCCCTCTGCCAGCTGGGCAAATACACTACGAACAA...CACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCAGCCAAGTCCTGGCGTTaGCTGGTGATGAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPAKSWR*LVMKMW
Trigger: CCACATCTTCATCACCAGCAAACGCCAGGACTTGGC...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS GCA 90 bp GTAGAGGGGGTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGTGGCTGGGGATGGTGTGCTATATC +
Preference number: 5 (lower is better)
Translates to: VEGVAREGWALSLQN*CSGSQWWLGMVCYI
Trigger: GATATAGCACACCATCCCCAGCCACCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS GCA 90 bp CTCAGAAGGTGCCAGGATCCCTTCTCCAGCATCAGCATCCCTAGCTaGCCACGCGTTACACCCCAGAGTCACACACCTGCTCAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LRRCQDPFSSISIPS*PRVTPQSHTPAQVC
Trigger: ACACACCTGAGCAGGTGTGTGACTCTGGGGTGTAACGCGTGGGCAGCTAGGGATGCTGATGCTGGAGAAGGGATCCTGGCACCTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577646.5
CDS CCA 90 bp GTCGTTTCTCACAGTGGCTGGGGATGGTGTGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGTGGTCAGAGCGCCTGGCGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: VVSHSGWGWCAISTN*KLVLESGQSAWRGE
Trigger: CTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACTGTGAGAAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS-3UTR CAA 90 bp ATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCCATCAAGAGCCGGTCCTTaGGTCAAGCAGTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: MVGRKAEKSRGGGRGLCPSRAGP*VKQFCE
Trigger: CTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGA...TGGACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTCGGTTCCGGGTCACCTaGTTGATGATGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCRFRVT*LMMQFL
Trigger: CAAGAACTGCATCATCAACAAGGTGACCCGGAACCG...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
CDS-3UTR CAA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAAGTTTCCTGGTGCGCTTaGCGCACCTTCTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKVSWCA*RTFSMS
Trigger: GCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAAC...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTTGTTCGTAGTGTATTaGCCCAGCTGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCLFVVY*PSWQRA
Trigger: TGCCCTCTGCCAGCTGGGCAAATACACTACGAACAA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS GCA 90 bp GTAGAGGGGGTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGAGTGGTTTGAGCCATTCCAAAGCG +
Preference number: 5 (lower is better)
Translates to: VEGVAREGWALSLQN*CSGSQWSGLSHSKA
Trigger: CGCTTTGGAATGGCTCAAACCACTCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394081.7
ENST00000579727.5
CDS CCA 90 bp GGGATGTCTCAAGAGCCGGTCCTTTGGTCAAGCAGTTCTGTGAGCTaGCACTTTTCCTGGGAAGGTCCAGAGCTGGCCTTCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: GMSQEPVLWSSSSVS*HFSWEGPELAFRAP
Trigger: TGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
ENST00000582914.1
CDS-3UTR CAA 90 bp GCTGGGGAGCAATGGCTTGTGAGTTCTGAGGATGGGGGAGCCAAGTCCTGGCGTCGGTTCCGGGTCACCTaGTTGATGATGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AGEQWLVSSEDGGAKSWRRFRVT*LMMQFL
Trigger: CAAGAACTGCATCATCAACAAGGTGACCCGGAACCG...ACGCCAGGACTTGGCTCCCCCATCCTCAGAACTCACAAGCCATTGCTCCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR CAA 90 bp AGGTGGGGGCAGGGCTGGTGCGGGGTCACATGGTCGGTAGAAAGGCAGAGAAAATTGTTCGTAGTGTATTaGCCCAGCTGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RWGQGWCGVTWSVERQRKLFVVY*PSWQRA
Trigger: TGCCCTCTGCCAGCTGGGCAAATACACTACGAACAA...TTTTCTCTGCCTTTCTACCGACCATGTGACCCCGCACCAGCCCTGCCCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS-3UTR CAA 90 bp CACATGGTCGGTAGAAAGGCAGAGAAAAGCCGGGGCGGAGGGCGAGGGCTGTGTTCTCAATGGAGTGGTTaGAGCCATTCCAAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: HMVGRKAEKSRGGGRGLCSQWSG*SHSKAE
Trigger: CTCCGCTTTGGAATGGCTCAAACCACTCCATTGAGA...ACACAGCCCTCGCCCTCCGCCCCGGCTTTTCTCTGCCTTTCTACCGACCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS-3UTR CAA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGTCAAGAGCCGGTCCTTaGGTCAAGCAGTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWSRAGP*VKQFCE
Trigger: CTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGA...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp GGATGGGGGAGCCAAGTCCTGGCGTTTGCTGGTGATGAAGATGTGGTGAGCTGGCGGTTCCGGGTCACCTaGTTGATGATGCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GWGSQVLAFAGDEDVVSWRFRVT*LMMQFL
Trigger: CAAGAACTGCATCATCAACAAGGTGACCCGGAACCG...CCAGCTCACCACATCTTCATCACCAGCAAACGCCAGGACTTGGCTCCCCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
CDS-3UTR CAA 90 bp CCAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTTGTTCGTAGTGTATTaGCCCAGCTGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGKWRNSGQVCVGPSTVQLFVVY*PSWQRA
Trigger: TGCCCTCTGCCAGCTGGGCAAATACACTACGAACAA...CTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp CAGGGAAATGGAGGAACTCGGGCCAAGTGTGTGTCGGCCCATCTACTGTCCAGTTCAAGAGCCGGTCCTTaGGTCAAGCAGTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QGNGGTRAKCVSAHLLSSSRAGP*VKQFCE
Trigger: CTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGA...ACTGGACAGTAGATGGGCCGACACACACTTGGCCCGAGTTCCTCCATTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp AGTGTGTGTCGGCCCATCTACTGTCCAGTGTGTGTGTGTTTGTGTGTGTGCGCAAAGCCGGGCAGCTGCTaGGCGAACTCCACAGTCTTA +
Preference number: 5 (lower is better)
Translates to: SVCRPIYCPVCVCLCVCAKPGSC*ANSTVL
Trigger: TAAGACTGTGGAGTTCGCCAAGCAGCTGCCCGGCTT...TGCGCACACACACAAACACACACACACTGGACAGTAGATGGGCCGACACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000425707.7
CDS-3UTR CAA 90 bp AAACAAAACCAGCGAGAATTAATACCTGGGGTTGGTATGGCAGGGTATGTACAGGTTTCCTGGTGCGCTTaGCGCACCTTCTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: KQNQRELIPGVGMAGYVQVSWCA*RTFSMS
Trigger: GCTCATTGAGAAGGTGCGCAAAGCGCACCAGGAAAC...CTGTACATACCCTGCCATACCAACCCCAGGTATTAATTCTCGCTGGTTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000425707.7
CDS CCA 72 bp GCCGGGGCGGAGGGCGAGGGCTGTGTCCATGTGGCGTaGGCGGTCACGGGGAGTGGGTGGCCGGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: AGAEGEGCVHVA*AVTGSGWPGCF
Trigger: GAAGCAGCCCGGCCACCCACTCCCCGTGACCGCCCACGCCACATGGACACAGCCCTCGCCCTCCGCCCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000425707.7
CDS CCA 72 bp GCCAGCGAGCACAGCGTCTGCCCTAACCCGGCGCCCTaGTGCTGCTCGGCATCAGGGTGCGGGGTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: ASEHSVCPNPAP*CCSASGCGVPG
Trigger: TCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS GCA 72 bp TCCCCTCGAAGGCAAGAGGTCCGAGCTGGGAAGTCCTaGGCGCCGCCCCCGTCACTCAGCCGGCGGCGCCAT +
Preference number: 6 (lower is better)
Translates to: SPRRQEVRAGKS*APPPSLSRRRH
Trigger: ATGGCGCCGCCGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394081.7
ENST00000579727.5
CDS GCA 72 bp GAGCACAGCGTCTGCCCTAACCCGGCGCCCTGGTGCTaGTCGGCATCAGGGTGCGGGGTCCCGGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: EHSVCPNPAPWC*SASGCGVPGEE
Trigger: CTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS GCA 72 bp AGCGAGCACAGCGTCTGCCCTAACCCGGCGCCCTGGTaGTGCTCGGCATCAGGGTGCGGGGTCCCGGGAGAG +
Preference number: 6 (lower is better)
Translates to: SEHSVCPNPAPW*CSASGCGVPGE
Trigger: CTCTCCCGGGACCCCGCACCCTGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS TCA 72 bp CAGAACTGCTGCTCTGGGTCTCAATGGCGCTGCCCGTaGCATCACCCGCTCGCCAGCCCGCCCGCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: QNCCSGSQWRCP*HHPLASPPAGL
Trigger: GAGCCCCGCGGGCGGGCTGGCGAGCGGGTGATGTCACGGGCAGCGCCATTGAGACCCAGAGCAGCAGTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS CAA 90 bp AGCGGCGGCAGGAGGCGTAGGGCCGGGTCGCGCGGGGCCAAGTGTTaGGCACCCGGGTGTGACATTGTGCAGCTCGGACGCTGTGTCGGA +
Preference number: 6 (lower is better)
Translates to: SGGRRRRAGSRGAKC*APGCDIVQLGRCVG
Trigger: TCCGACACAGCGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAACACTTGGCCCCGCGCGACCCGGCCCTACGCCTCCTGCCGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS GCA 72 bp GGTGCCCGCCCCCAGGTGTCGGGCAGGAGCTGCTGTTaGTGGCCATGCCAAGCGGCCACAGTCAGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: GARPQVSGRSCC*WPCQAATVRRE
Trigger: CTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 72 bp GCCCGCCCCCAGGTGTCGGGCAGGAGCTGCTGTTGCTaGCCATGCCAAGCGGCCACAGTCAGAAGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: ARPQVSGRSCCC*PCQAATVRREA
Trigger: TGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 72 bp GGAGGCGTAGGGCCGGGTCGCGCGGGGCCAAGTGTTTaGCACCCGGGTGTGACATTGTGCAGCTCGGACGCT +
Preference number: 6 (lower is better)
Translates to: GGVGPGRAGPSV*HPGVTLCSSDA
Trigger: AGCGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAACACTTGGCCCCGCGCGACCCGGCCCTACGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS CAA 72 bp AGGAGGCGTAGGGCCGGGTCGCGCGGGGCCAAGTGTTaGGCACCCGGGTGTGACATTGTGCAGCTCGGACGC +
Preference number: 6 (lower is better)
Translates to: RRRRAGSRGAKC*APGCDIVQLGR
Trigger: GCGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAACACTTGGCCCCGCGCGACCCGGCCCTACGCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS TCA 72 bp GGAAGAAGAAGGCGTAGGGAGGCACCGGGTACCCATTaGGGTGCCCGCCCCCAGGTGTCGGGCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: GRRRRREAPGTH*GARPQVSGRSC
Trigger: GCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS GCA 72 bp AAGCAACCCGTTCGGGGTGCCAGCGAGCACAGCGTCTaGCCTAACCCGGCGCCCTGGTGCTGCTCGGCATCA +
Preference number: 6 (lower is better)
Translates to: KQPVRGASEHSV*PNPAPWCCSAS
Trigger: TGATGCCGAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394089.6
ENST00000425707.7
CDS CAA 72 bp AGGTGCCCGCCCCCAGGTGTCGGGCAGGAGCTGCTGTaGCTGGCCATGCCAAGCGGCCACAGTCAGAAGGGA +
Preference number: 6 (lower is better)
Translates to: RCPPPGVGQELL*LAMPSGHSQKG
Trigger: TCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 72 bp CGTACATCTTTCCCCTCGAAGGCAAGAGGTCCGAGCTaGGAAGTCCTGCGCGCCGCCCCCGTCACTCAGCCG +
Preference number: 6 (lower is better)
Translates to: RTSFPSKARGPS*EVLRAAPVTQP
Trigger: CGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGAAAGATGTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394081.7
CDS CAA 90 bp TACCCATTGAGGTGCCCGCCCCCAGGTGTCGGGCAGGAGCTGCTGTaGCTGGCCATGCCAAGCGGCCACAGTCAGAAGGGAGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: YPLRCPPPGVGQELL*LAMPSGHSQKGGRQ
Trigger: CTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS TCA 72 bp CGGGTCGCGCGGGGCCAAGTGTTTGGCACCCGGGTGTaGCATTGTGCAGCTCGGACGCTGTGTCGGAATGAG +
Preference number: 6 (lower is better)
Translates to: RVARGQVFGTRV*HCAARTLCRNE
Trigger: CTCATTCCGACACAGCGTCCGAGCTGCACAATGTCACACCCGGGTGCCAAACACTTGGCCCCGCGCGACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS CCA 72 bp CTTCTATCTTTCCCCTCGAAGGCAAGAGGTCCGAGCTaGGAAGTCCTGCGCGCCGCCCCCGTCACTCAGCCG +
Preference number: 6 (lower is better)
Translates to: LLSFPSKARGPS*EVLRAAPVTQP
Trigger: CGGCTGAGTGACGGGGGCGGCGCGCAGGACTTCCCAGCTCGGACCTCTTGCCTTCGAGGGGAAAGATAGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579727.5
CDS GCA 72 bp TTGTTTCGGTCGTTTCTCACAGCCAGCCCTCCCAGCTaGAGTCTCCCTGGGGGTCCCTTGGGACTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LFRSFLTASPPS*SLPGGPLGLAL
Trigger: CAGAGCCAGTCCCAAGGGACCCCCAGGGAGACTGCAGCTGGGAGGGCTGGCTGTGAGAAACGACCGAAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420042.1
CDS GCA 72 bp GCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGCGTCCTTCCTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: AREGWALSLQNC*SGSQWRPSSSR
Trigger: CCGGGAGGAGGAAGGACGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475125.1
CDS GCA 72 bp GCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGTGGCTGGGGATGGTGTGC +
Preference number: 6 (lower is better)
Translates to: AREGWALSLQNC*SGSQWWLGMVC
Trigger: GCACACCATCCCCAGCCACCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS GCA 72 bp GTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGTGGCTGGGGATGGTG +
Preference number: 6 (lower is better)
Translates to: VAREGWALSLQN*CSGSQWWLGMV
Trigger: CACCATCCCCAGCCACCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254066.10
ENST00000394089.6
CDS GCA 72 bp GTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGCGTCCTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VAREGWALSLQN*CSGSQWRPSSS
Trigger: GGAGGAGGAAGGACGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475125.1
CDS CCA 72 bp GCTGGGGATGGTGTGCTATATCCACTAACTGGAAGCTaGTGCTGGAGAGTGGTCAGAGCGCCTGGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: AGDGVLYPLTGS*CWRVVRAPGGE
Trigger: CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 72 bp TGTAGATGCGGGGTAGAGGGGGTGGCGAGGGAGGGCTaGGCACTATCTCTTCAGAACTGCTGCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: CRCGVEGVAREG*ALSLQNCCSGS
Trigger: AGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCACCCCCTCTACCCCGCATCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000475125.1
ENST00000579727.5
CDS CCA 72 bp GGAGGGCTGGGCACTATCTCTTCAGAACTGCTGCTCTaGGTCTCAATGGCGCTGCCCGTGACATCACCCGCT +
Preference number: 6 (lower is better)
Translates to: GGLGTISSELLL*VSMALPVTSPA
Trigger: AGCGGGTGATGTCACGGGCAGCGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394086.7
CDS CCA 72 bp GGAGGGCTGGGCACTATCTCTTCAGAACTGCTGCTCTaGGTCTCAATGGCGTCCTTCCTCCTCCCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: GGLGTISSELLL*VSMASFLLPGR
Trigger: TCTCCCCGGGAGGAGGAAGGACGCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475125.1
CDS CCA 72 bp GATGGTGTGCTATATCCACTAACTGGAAGCTGGTGCTaGAGAGTGGTCAGAGCGCCTGGCGGGGAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: DGVLYPLTGSWC*RVVRAPGGESP
Trigger: TGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
CDS CCA 72 bp CACAGTGGCTGGGGATGGTGTGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGTGGTCAGAGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: HSGWGWCAISTN*KLVLESGQSAW
Trigger: CCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425707.7
CDS GCA 72 bp GCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTGCTaGTCTGGGTCTCAATGGAGTGGTTTGAGCCATTCC +
Preference number: 6 (lower is better)
Translates to: AREGWALSLQNC*SGSQWSGLSHS
Trigger: GGAATGGCTCAAACCACTCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394081.7
ENST00000579727.5
CDS GCA 72 bp GTGGCGAGGGAGGGCTGGGCACTATCTCTTCAGAACTaGTGCTCTGGGTCTCAATGGAGTGGTTTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: VAREGWALSLQN*CSGSQWSGLSH
Trigger: ATGGCTCAAACCACTCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCCCTCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394081.7
ENST00000579727.5
CDS CCA 72 bp CAAGAGCCGGTCCTTTGGTCAAGCAGTTCTGTGAGCTaGCACTTTTCCTGGGAAGGTCCAGAGCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: QEPVLWSSSSVS*HFSWEGPELAF
Trigger: GAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
ENST00000582914.1
CDS CCA 72 bp CAGGTGGGTTGGGGGATGTCTCAAGAGCCGGTCCTTTaGTCAAGCAGTTCTGTGAGCTGGCACTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: QVGWGMSQEPVL*SSSSVSWHFSW
Trigger: CCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
ENST00000582914.1
CDS CCA 72 bp AATGGTGGCTGGGGATGGTGTGCTATATCCACTAACTaGAAGCTGGTGCTGGAGAGTGGTCAGAGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: NGGWGWCAISTN*KLVLESGQSAW
Trigger: CCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000577646.5
CDS CAA 72 bp CCAGGTGGGTTGGGGGATGTCTCAAGAGCCGGTCCTTaGGTCAAGCAGTTCTGTGAGCTGGCACTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: PGGLGDVSRAGP*VKQFCELALFL
Trigger: CAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254066.10
ENST00000394089.6
ENST00000425707.7
ENST00000577646.5
ENST00000582914.1
CDS CCA 72 bp GGAGGGCTGGGCACTATCTCTTCAGAACTGCTGCTCTaGGTCTCAATGGAGTGGTTTGAGCCATTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: GGLGTISSELLL*VSMEWFEPFQS
Trigger: GCTTTGGAATGGCTCAAACCACTCCATTGAGACCCAGAGCAGCAGTTCTGAAGAGATAGTGCCCAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394081.7
ENST00000579727.5
CDS TCA 72 bp GTCCCAGAGGTCAATGTCCAGAGAGACACGTTGTTCTaGGCTGTTGTTCGTAGTGTATTTGCCCAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: VPEVNVQRDTLF*AVVRSVFAQLA
Trigger: TGCCAGCTGGGCAAATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGACATTGACCTCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254066.10
ENST00000394081.7
ENST00000394086.7
ENST00000394089.6
ENST00000420042.1
ENST00000425707.7
ENST00000475125.1