RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPSN (Homo sapiens)

Ensembl gene IDs: ENSG00000165917

Ensembl transcript IDs: ENST00000298854.7, ENST00000352508.7, ENST00000524487.5, ENST00000528356.1, ENST00000529341.1

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGACCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: RPGSCPRSKWASGVQ*RKSRSGEEEAHACC
Trigger: GCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
3UTR-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAASGVQ*RKSRSG
Trigger: GCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
3UTR-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAASGVQ*RKSRSG
Trigger: GCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
3UTR-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTaGAGTGGAGAAAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVNGPLA*SGERAG
Trigger: TCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
3UTR-3UTR GCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGCCTCCCAAAGTGCTTaGGAGACAGACGTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: GFTMLAKMILNPGAQVISASQSA*ETDVRH
Trigger: GTGCCTCACGTCTGTCTCGCAAGCACTTTGGGAGGC...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
3UTR CCA 72 bp AGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: SCPRSKWASGVQ*RKSRSGEEEAH
Trigger: GTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
3UTR-3UTR CAA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGGGCCTCCCAAAGTGCTaGCGAGACAGACGTGAGGCA +
Preference number: 3 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQGLPKC*RDRREA
Trigger: TGCCTCACGTCTGTCTCGCAAGCACTTTGGGAGGCC...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAAERLQ*PVPVLQ
Trigger: CTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSRQSA*SGRSPC
Trigger: GCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCGGCCCATCTCCGAGTaGGCTGTGACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAARPISE*AVTRQP
Trigger: GGGCTGCCTGGTCACAGCCCACTCGGAGATGGGCCG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGAERLQ*PVPVLQ
Trigger: CTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAAERLQ*PVPVLQ
Trigger: CTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGTGTCCCACGTGGGGTaGTCCCTGGTGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAVSHVG*SLVAPC
Trigger: GCACGGAGCCACCAGGGATCACCCCACGTGGGACAC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTGTCCCACGTGGGGTaGTCCCTGGTGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGVSHVG*SLVAPC
Trigger: GCACGGAGCCACCAGGGATCACCCCACGTGGGACAC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASELGT*PGTRQP
Trigger: GGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCAACACTCCATGGCACTaGCCAGGCGGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAANTPWH*PGGPAG
Trigger: GCCTGCTGGGCCGCCTGGGCAGTGCCATGGAGTGTT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCGGCCCATCTCCGAGTaGGCTGTGACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAARPISE*AVTRQP
Trigger: GGGCTGCCTGGTCACAGCCCACTCGGAGATGGGCCG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCACCTGGCCTCCGAGCTaGGCACCTGCCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAATWPPS*APALVP
Trigger: TGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCATGAGCGGCGGCAGTTaGGACAGCTCCGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAMSGGS*DSSGSR
Trigger: ACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCAT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGCCAGGCTTCATGGATaGGCGGCGGCAGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAARLHG*AAAVGT
Trigger: TGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCTGGGCATAGAAGCTaGCCAGGCTGCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAPGHRS*PGCSTR
Trigger: GCGTGTGCTGCAGCCTGGGCAGCTTCTATGCCCAGG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSRQSA*SGRSPC
Trigger: GCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSRQSA*SGRSPC
Trigger: GCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAGCAGCGCCTGCACCTaGCCCAGGCGGTTTCCGATC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSSACT*PRRFPI
Trigger: GATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAACACCCAGCAGCGCCTaGACCTGCCCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGTPSSA*TCPRRF
Trigger: AAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGGAATGGGGCCTGGATaGAGAGCAGGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAGMGPG*RAGATL
Trigger: CAGGGTGGCGCCTGCTCTCCATCCAGGCCCCATTCC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCACGTGGGGTGATCCCTaGTGGCTCCGTGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAATWGDP*WLRASR
Trigger: CCTAGAGGCACGGAGCCACCAGGGATCACCCCACGT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGCCCTGTGTCCCACGTaGGGTGATCCCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGALCPT*GDPWWL
Trigger: GAGCCACCAGGGATCACCCCACGTGGGACACAGGGC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTACCTGGCCTCCGAGCTaGGCACCTGCCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAATWPPS*APALVP
Trigger: TGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCATGCTCAGGCTGACCTaGCCTCCGAGCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAMLRLT*PPSWAP
Trigger: AGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCAT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCTCTCCAGGGCCTTCTaGAAGACGCTGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAALSRAF*KTLRPR
Trigger: CCTGGGCCTCAGCGTCTTCCAGAAGGCCCTGGAGAG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCTCACAACACTCCATaGCACTGCCCAGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAPHNTP*HCPGGP
Trigger: TGGGCCGCCTGGGCAGTGCCATGGAGTGTTGTGAGG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCCCCACGGCTCCGGTaGATGTCAGCGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASPRLR*MSAKQS
Trigger: GCTCTGCTTCGCTGACATCCACCGGAGCCGTGGGGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTGTCCAGCGCCTTCCTaGCCACCCAGCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAACPAPS*PPSTWP
Trigger: TGGCCAAGTGCTGGGTGGCCAGGAAGGCGCTGGACA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTATGAGCGGCGGCAGTTaGGACAGCTCCGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAMSGGS*DSSGSR
Trigger: ACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCAT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGTGTCCCACGTGGGGTaGTCCCTGGTGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGVSHVG*SLVAPC
Trigger: GCACGGAGCCACCAGGGATCACCCCACGTGGGACAC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATCTCCGAGTGGGCTGTaGCCAGGCAGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSPSGL*PGSPAR
Trigger: GCGTGCTGGGCTGCCTGGTCACAGCCCACTCGGAGA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGCCAGGCTTCATGGATaGGCGGCGGCAGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGARLHG*AAAVGT
Trigger: TGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAGGCCTTGGCTATGGTaGGGACGACCTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAARPWLW*GRPGSC
Trigger: GCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATGCTTGGTCTGGTCCTaGCCCATCCTCCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGCLVWS*PILPKP
Trigger: GGGCTTGGGGAGGATGGGGCAGGACCAGACCAAGCA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSELGT*PGTRQP
Trigger: GGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSELGT*PGTRQP
Trigger: GGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAGAAGCTGCCCAGGCTaGAGCACACGCGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGRSCPG*STRGTR
Trigger: TCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGACCTGGGCATAGAAGCTaGCCAGGCTGCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGPGHRS*PGCSTR
Trigger: GCGTGTGCTGCAGCCTGGGCAGCTTCTATGCCCAGG...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTGGAACCTCACAACGTaGGCCCGCAGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAWNLTT*ARSSRC
Trigger: GCAGCGGGAACTGCGGGCGCACGTTGTGAGGTTCCA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGAGCAAGGTAGGGCCTaGAGCCGGCTGTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAEQGRA*SRLFFS
Trigger: CGAGAAGAACAGCCGGCTGCAGGCCCTACCTTGCTC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCGGGTCCCGTTGTTCTaGAGGCACCTGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAARVPLF*RHLRWK
Trigger: CTTCCACCTCAGGTGCCTGCAGAACAACGGGACCCG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGGACGACCTGGCAGCTaGCCCAGGAGTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGGRPGS*PRSKWA
Trigger: GGCCCATTTACTCCTGGGGCAGCTGCCAGGTCGTCC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAAAAGCAGCGTCGGGTaGGAGCCGGAATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGKSSVG*EPEWGL
Trigger: CAGGCCCCATTCCGGCTCCCACCCGACGCTGCTTTT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAAAAGCAGCGTCGGGTaGGAGCCGGAATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAKSSVG*EPEWGL
Trigger: CAGGCCCCATTCCGGCTCCCACCCGACGCTGCTTTT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTGGGGTGATCCCTGGTaGCTCCGTGCCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAWGDPW*LRASRH
Trigger: GTGCCTAGAGGCACGGAGCCACCAGGGATCACCCCA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAACGTGGGGTGATCCCTaGTGGCTCCGTGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGTWGDP*WLRASR
Trigger: CCTAGAGGCACGGAGCCACCAGGGATCACCCCACGT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTACGTGGGGTGATCCCTaGTGGCTCCGTGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAATWGDP*WLRASR
Trigger: CCTAGAGGCACGGAGCCACCAGGGATCACCCCACGT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCGGGCCGTGTCGATCTaGACCACAGCGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAARAVSI*TTANFS
Trigger: GCTGAAGTTCGCTGTGGTCCAGATCGACACGGCCCG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGCTGGGCACCTGCCCTaGTACCAGGCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVAGHLP*YQAAQG
Trigger: GCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGCTGGGCACCTGCCCTaGTACCAGGCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGAGHLP*YQAAQG
Trigger: GCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGACTCTCCAGGGCCTTCTaGAAGACGCTGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGLSRAF*KTLRPR
Trigger: CCTGGGCCTCAGCGTCTTCCAGAAGGCCCTGGAGAG...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATCCCCACGGCTCCGGTaGATGTCAGCGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSPRLR*MSAKQS
Trigger: GCTCTGCTTCGCTGACATCCACCGGAGCCGTGGGGA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCCTCCACGCACTCGTaGAACCTCACAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASSTHS*NLTTCA
Trigger: GGCGCACGTTGTGAGGTTCCACGAGTGCGTGGAGGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTGTTCTTCTCGCCTATaGACTCGCCGCACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAACSSRL*TRRTGR
Trigger: GCGGCCTGTGCGGCGAGTCCATAGGCGAGAAGAACA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTGCCCCAGGAGTAAATaGGCCTCTGGCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAACPRSK*ASGVQW
Trigger: CCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTCTCCGAGTGGGCTGTaGCCAGGCAGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSSPSGL*PGSPAR
Trigger: GCGTGCTGGGCTGCCTGGTCACAGCCCACTCGGAGA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCCTTCTGGAAGACGCTaGGGCCCAGGAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAPSGRR*GPGRHC
Trigger: GCAATGCCTTCCTGGGCCTCAGCGTCTTCCAGAAGG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTGTTCTGCAGGCACCTaGGGTGGAAGATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAACSAGT*GGRCGS
Trigger: GCTCCCACATCTTCCACCTCAGGTGCCTGCAGAACA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCCCTTCTCGATCTGCTaGTTGGTCTGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAPFSIC*LVWSCP
Trigger: GGGGCAGGACCAGACCAAGCAGCAGATCGAGAAGGG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAACACTCCATGGCACTaGCCAGGCGGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVNTPWH*PGGPAG
Trigger: GCCTGCTGGGCCGCCTGGGCAGTGCCATGGAGTGTT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATA +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASGRSP*CSAIFI
Trigger: TATGAAGATCGCGCTGCAGCACGGGGACCGGCCACT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAGCAGCGCCTGCACCTaGCCCAGGCGGTTTCCGATC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSSACT*PRRFPI
Trigger: GATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCCCGCTGCAGCCCTTTaGTGCGGTAAATGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAPAAAL*CGKCSR
Trigger: GCGAGAGCATTTACCGCAGCAAAGGGCTGCAGCGGG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGACCCGCTGCAGCCCTTTaGTGCGGTAAATGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGPAAAL*CGKCSR
Trigger: GCGAGAGCATTTACCGCAGCAAAGGGCTGCAGCGGG...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGAGCAAGGTAGGGCCTaGAGCCGGCTGTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAEQGRA*SRLFFS
Trigger: CGAGAAGAACAGCCGGCTGCAGGCCCTACCTTGCTC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCGGGTCCCGTTGTTCTaGAGGCACCTGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAARVPLF*RHLRWK
Trigger: CTTCCACCTCAGGTGCCTGCAGAACAACGGGACCCG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGGAATGGGGCCTGGATaGAGAGCAGGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGGMGPG*RAGATL
Trigger: CAGGGTGGCGCCTGCTCTCCATCCAGGCCCCATTCC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGGAATGGGGCCTGGATaGAGAGCAGGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVGMGPG*RAGATL
Trigger: CAGGGTGGCGCCTGCTCTCCATCCAGGCCCCATTCC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAGCCGGAATGGGGCCTaGATGGAGAGCAGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSRNGA*MESRRH
Trigger: GTGGCGCCTGCTCTCCATCCAGGCCCCATTCCGGCT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGGGTGGGAGCCGGAATaGGGCCTGGATGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGGWEPE*GLDGEQ
Trigger: CTGCTCTCCATCCAGGCCCCATTCCGGCTCCCACCC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGCCTCTAGGCACTCATaGGGCAGGAATCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAASRHS*GRNHSA
Trigger: GGCACTGTGATTCCTGCCCCATGAGTGCCTAGAGGC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGCCCTGTGTCCCACGTaGGGTGATCCCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVALCPT*GDPWWL
Trigger: GAGCCACCAGGGATCACCCCACGTGGGACACAGGGC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAATCTGCTGCTTGGTCTaGTCCTGCCCCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGICCLV*SCPILP
Trigger: GGGGAGGATGGGGCAGGACCAGACCAAGCAGCAGAT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCTCGATCTGCTGCTTaGTCTGGTCCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASRSAA*SGPAPS
Trigger: GGATGGGGCAGGACCAGACCAAGCAGCAGATCGAGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGCTGGGCACCTGCCCTaGTACCAGGCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSAGHLP*YQAAQG
Trigger: GCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAACCTGGCCTCCGAGCTaGGCACCTGCCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGTWPPS*APALVP
Trigger: TGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCTGGGCTCTCTCGATaGCATCCAGAGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAPGLSR*HPEPCP
Trigger: TGGACAAGGCTCTGGATGCCATCGAGAGAGCCCAGG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTCCTCGGCCAGATCCTaGGCTCTCTCGATGGCATCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASSARS*ALSMAS
Trigger: GGATGCCATCGAGAGAGCCCAGGATCTGGCCGAGGA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATCCTCCACGCACTCGTaGAACCTCACAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSSTHS*NLTTCA
Trigger: GGCGCACGTTGTGAGGTTCCACGAGTGCGTGGAGGA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTGTTCTTCTCGCCTATaGACTCGCCGCACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAACSSRL*TRRTGR
Trigger: GCGGCCTGTGCGGCGAGTCCATAGGCGAGAAGAACA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCGCGGAAGCGCCCCATaGGGTCCGAGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSRGSAP*GPSSSP
Trigger: TGGAGAAGAGCTCGGACCTCATGGGGCGCTTCCGCG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCAGACAGTGCAGCTTaGGCTGGCTCAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASDSAA*AGSACS
Trigger: GGAACAAGCTGAGCCAGCTCAAGCTGCACTGTCTGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAGGCCTTGGCTATGGTaGGGACGACCTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVRPWLW*GRPGSC
Trigger: GCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAATCACAGTGCCAGCTaGCCCCCGAAACGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGNHSAS*PPKRGN
Trigger: GTTCCCACGTTTCGGGGGGCAGCTGGCACTGTGATT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAGCCCCTTCTCGATCTaGTGCTTGGTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASPFSI*CLVWSC
Trigger: GCAGGACCAGACCAAGCAGCAGATCGAGAAGGGGCT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAAGCCCCTTCTCGATCTaGTGCTTGGTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSPFSI*CLVWSC
Trigger: GCAGGACCAGACCAAGCAGCAGATCGAGAAGGGGCT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAALLVAA*QVQVAL
Trigger: GAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAGAAGCTGCCCAGGCTaGAGCACACGCGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVRSCPG*STRGTR
Trigger: TCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACCTGGGCATAGAAGCTaGCCAGGCTGCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVPGHRS*PGCSTR
Trigger: GCGTGTGCTGCAGCCTGGGCAGCTTCTATGCCCAGG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGGCCGGTCCCCGTGCTaGAGCGCGATCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVGRSPC*SAIFID
Trigger: GTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCACACCCAGCAGCGCCTaGACCTGCCCCAGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSTPSSA*TCPRRF
Trigger: AAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGGAACCTCACAACGTaGGCCCGCAGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVWNLTT*ARSSRC
Trigger: GCAGCGGGAACTGCGGGCGCACGTTGTGAGGTTCCA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGAAGCCCACGCCTGCTaGCAGGAGTCATACAAAGCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAEAHAC*QESYKA
Trigger: GGCTTTGTATGACTCCTGGCAGCAGGCGTGGGCTTC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGAGGAAGCCCACGCCTaGTGCCAGGAGTCATACAAA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAEEAHA*CQESYK
Trigger: TTTGTATGACTCCTGGCAGCAGGCGTGGGCTTCCTC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCAATGGGCCTCTGGCGTaGAGTGGAGAAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAANGPLA*SGERAG
Trigger: TCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGGGTGGGAGCCGGAATaGGGCCTGGATGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSGWEPE*GLDGEQ
Trigger: CTGCTCTCCATCCAGGCCCCATTCCGGCTCCCACCC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGCCTCTAGGCACTCATaGGGCAGGAATCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGASRHS*GRNHSA
Trigger: GGCACTGTGATTCCTGCCCCATGAGTGCCTAGAGGC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGGGGTGATCCCTGGTaGCTCCGTGCCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVWGDPW*LRASRH
Trigger: GTGCCTAGAGGCACGGAGCCACCAGGGATCACCCCA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATGGGGTGATCCCTGGTaGCTCCGTGCCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGWGDPW*LRASRH
Trigger: GTGCCTAGAGGCACGGAGCCACCAGGGATCACCCCA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGCCCTGTGTCCCACGTaGGGTGATCCCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSALCPT*GDPWWL
Trigger: GAGCCACCAGGGATCACCCCACGTGGGACACAGGGC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTCTCGATCTGCTGCTTaGTCTGGTCCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASRSAA*SGPAPS
Trigger: GGATGGGGCAGGACCAGACCAAGCAGCAGATCGAGA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTTGGACTGGTACAGCTaGAGCCCCTTCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAALDWYS*SPFSIC
Trigger: GCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCTGTCTGGTTGGACTaGTACAGCTGGAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASVWLD*YSWSPF
Trigger: GAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAATGCTCAGGCTGACCTaGCCTCCGAGCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVMLRLT*PPSWAP
Trigger: AGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCAT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAATGCTCAGGCTGACCTaGCCTCCGAGCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGMLRLT*PPSWAP
Trigger: AGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCAT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCGCGGCACTCGAGCATaGCGTCATCATTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAARGTRA*RHHCCG
Trigger: CCCACAACAATGATGACGCCATGCTCGAGTGCCGCG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAACGGCCATGTGGTACTaGCTCATGGCCCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGTAMWY*LMARYF
Trigger: GAAGTACCGGGCCATGAGCCAGTACCACATGGCCGT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATGTCCAGCGCCTTCCTaGCCACCCAGCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGCPAPS*PPSTWP
Trigger: TGGCCAAGTGCTGGGTGGCCAGGAAGGCGCTGGACA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTGCAGGCACCTGAGGTaGAAGATGTGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAACRHLR*KMWEQG
Trigger: ACCTTGCTCCCACATCTTCCACCTCAGGTGCCTGCA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCAAAGCCAGGCTTCATaGATGAGCGGCGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAQSQAS*MSGGSW
Trigger: CCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACCTTCTGGAAGACGCTaGGGCCCAGGAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVPSGRR*GPGRHC
Trigger: GCAATGCCTTCCTGGGCCTCAGCGTCTTCCAGAAGG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCTTTGCCATAGTTGTTaGCAAGCTCTGCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAALCHSC*QALPPC
Trigger: GCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTTCCGATCTCGGTCATaGTGCTCATGGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAFRSRS*CSWRSR
Trigger: ACGACTCCGCCATGAGCATCATGACCGAGATCGGAA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTCAGACAGTGCAGCTTaGGCTGGCTCAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAASDSAA*AGSACS
Trigger: GGAACAAGCTGAGCCAGCTCAAGCTGCACTGTCTGA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCAGGCCTTGGCTATGGTaGGGACGACCTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSRPWLW*GRPGSC
Trigger: GCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACCCTTCTCGATCTGCTaGTTGGTCTGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVPFSIC*LVWSCP
Trigger: GGGGCAGGACCAGACCAAGCAGCAGATCGAGAAGGG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAALLVAA*QVQVAL
Trigger: GAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTACAGCTTCTCGTTGCTaGGTGCCAGGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAATASRC*VPGSGS
Trigger: GCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAACAGCTTCTCGTTGCTaGGTGCCAGGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGTASRC*VPGSGS
Trigger: GCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCAGAAGCTGCCCAGGCTaGAGCACACGCGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSRSCPG*STRGTR
Trigger: TCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCGTTGTTGACAAGCTCTaGCGCCTTGCAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAVVDKL*RLAGEE
Trigger: TTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAAC...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCSRQSA*SGRSPC
Trigger: GCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCTGCAGCCCTTTGCTaGGGTAAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAAAALC*GKCSRS
Trigger: TGAGCGAGAGCATTTACCGCAGCAAAGGGCTGCAGC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACGGGTCCCGTTGTTCTaGAGGCACCTGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVRVPLF*RHLRWK
Trigger: CTTCCACCTCAGGTGCCTGCAGAACAACGGGACCCG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAATGGGCCTCTGGCGTaGAGTGGAGAAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAANGPLA*SGERAG
Trigger: TCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGGACGACCTGGCAGCTaGCCCAGGAGTAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSGRPGS*PRSKWA
Trigger: GGCCCATTTACTCCTGGGGCAGCTGCCAGGTCGTCC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCAAAAGCAGCGTCGGGTaGGAGCCGGAATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSKSSVG*EPEWGL
Trigger: CAGGCCCCATTCCGGCTCCCACCCGACGCTGCTTTT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAATCTGCTGCTTGGTCTaGTCCTGCCCCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVICCLV*SCPILP
Trigger: GGGGAGGATGGGGCAGGACCAGACCAAGCAGCAGAT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATTGGACTGGTACAGCTaGAGCCCCTTCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGLDWYS*SPFSIC
Trigger: GCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCCTTCTCTGTCTGGTTaGACTGGTACAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAAPSLSG*TGTAGA
Trigger: GGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGACCTTCTCTGTCTGGTTaGACTGGTACAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGPSLSG*TGTAGA
Trigger: GGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGG...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACGGGCCGTGTCGATCTaGACCACAGCGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGRAVSI*TTANFS
Trigger: GCTGAAGTTCGCTGTGGTCCAGATCGACACGGCCCG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACGGGCCGTGTCGATCTaGACCACAGCGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVRAVSI*TTANFS
Trigger: GCTGAAGTTCGCTGTGGTCCAGATCGACACGGCCCG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGGCGGAGTCGTACCTaGGGAAGGCTGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVWRSRT*GRLSPG
Trigger: ACCTGGAGACAGCCTTCCCCAGGTACGACTCCGCCA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATGGCGGAGTCGTACCTaGGGAAGGCTGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGWRSRT*GRLSPG
Trigger: ACCTGGAGACAGCCTTCCCCAGGTACGACTCCGCCA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATCCTCGGCCAGATCCTaGGCTCTCTCGATGGCATCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSSARS*ALSMAS
Trigger: GGATGCCATCGAGAGAGCCCAGGATCTGGCCGAGGA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVASGVQ*RKSRSG
Trigger: GCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGCCCCAGGAGTAAATaGGCCTCTGGCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVCPRSK*ASGVQW
Trigger: CCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACAGTGCAGCTTGAGCTaGCTCAGCTCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGQCSLS*LSSRSP
Trigger: TGGGGACCTGGAGCTGAGCCAGCTCAAGCTGCACTG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352508.7
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCCTTCTGGAAGACGCTaGGGCCCAGGAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSPSGRR*GPGRHC
Trigger: GCAATGCCTTCCTGGGCCTCAGCGTCTTCCAGAAGG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTCTTTGCCATAGTTGTTaGCAAGCTCTGCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAALCHSC*QALPPC
Trigger: GCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAG...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR TCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGTTCTGCAGGCACCTaGGGTGGAAGATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVCSAGT*GGRCGS
Trigger: GCTCCCACATCTTCCACCTCAGGTGCCTGCAGAACA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATCAGACAGTGCAGCTTaGGCTGGCTCAGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSDSAA*AGSAPG
Trigger: ACCTGGAGCTGAGCCAGCTCAAGCTGCACTGTCTGA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352508.7
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAATCACAGTGCCAGCTaGCCCCCGAAACGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGNHSAS*PPKRGN
Trigger: GTTCCCACGTTTCGGGGGGCAGCTGGCACTGTGATT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAATCACAGTGCCAGCTaGCCCCCGAAACGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVNHSAS*PPKRGN
Trigger: GTTCCCACGTTTCGGGGGGCAGCTGGCACTGTGATT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCCCTTCTCGATCTGCTaGTTGGTCTGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSPFSIC*LVWSCP
Trigger: GGGGCAGGACCAGACCAAGCAGCAGATCGAGAAGGG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCACCTTTGTCCACACCTaGAATGCCTTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAATFVHT*NAFSVW
Trigger: CCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCSELGT*PGTRQP
Trigger: GGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGA...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATA +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSSGRSP*CSAIFI
Trigger: TATGAAGATCGCGCTGCAGCACGGGGACCGGCCACT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACTCTCGCTCAGACAGTaGAGCTTGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVLSLRQ*SLSWLS
Trigger: GCTGAGCCAGCTCAAGCTGCACTGTCTGAGCGAGAG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACTCTCGCTCAGACAGTaGAGCTTGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGLSLRQ*SLSWLS
Trigger: GCTGAGCCAGCTCAAGCTGCACTGTCTGAGCGAGAG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCTTTGCTGCGGTAAATaGTCTCGCTCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAALCCGK*SRSDSA
Trigger: TGCACTGTCTGAGCGAGAGCATTTACCGCAGCAAAG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCCCGCTGCAGCCCTTTaGTGCGGTAAATGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSPAAAL*CGKCSR
Trigger: GCGAGAGCATTTACCGCAGCAAAGGGCTGCAGCGGG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGAGCAAGGTAGGGCCTaGAGCCGGCTGTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSEQGRA*SRLFFS
Trigger: CGAGAAGAACAGCCGGCTGCAGGCCCTACCTTGCTC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGAAGCCCACGCCTGCTaGCAGGAGTCATACAAAGCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVEAHAC*QESYKA
Trigger: GGCTTTGTATGACTCCTGGCAGCAGGCGTGGGCTTC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCATCTGCTGCTTGGTCTaGTCCTGCCCCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSICCLV*SCPILP
Trigger: GGGGAGGATGGGGCAGGACCAGACCAAGCAGCAGAT...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACGCGGCACTCGAGCATaGCGTCATCATTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVRGTRA*RHHCCG
Trigger: CCCACAACAATGATGACGCCATGCTCGAGTGCCGCG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGTGGTACTGGCTCATaGCCCGGTACTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVCGTGS*PGTSGS
Trigger: GGAGCCTGAAGTACCGGGCCATGAGCCAGTACCACA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAACGGCCATGTGGTACTaGCTCATGGCCCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGTAMWY*LMARYF
Trigger: GAAGTACCGGGCCATGAGCCAGTACCACATGGCCGT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLAERLQ*PVPVLQ
Trigger: CTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGC...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACCTGGGCTCTCTCGATaGCATCCAGAGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVPGLSR*HPEPCP
Trigger: TGGACAAGGCTCTGGATGCCATCGAGAGAGCCCAGG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACAGTGCAGCTTGAGCTaGCTCAGCTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVQCSLS*LSLFPT
Trigger: GGTGGGGAACAAGCTGAGCCAGCTCAAGCTGCACTG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTCCTCCACGCACTCGTaGAACCTCACAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSSSTHS*NLTTCA
Trigger: GGCGCACGTTGTGAGGTTCCACGAGTGCGTGGAGGA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACAAAGCCAGGCTTCATaGATGAGCGGCGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGQSQAS*MSGGSW
Trigger: CCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGCCTCTGGCGTGCAGTaGAGAAAGAGCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSASGVQ*RKSRSG
Trigger: GCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGGTGTCCCACGTGGGGTaGTCCCTGGTGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLVSHVG*SLVAPC
Trigger: GCACGGAGCCACCAGGGATCACCCCACGTGGGACAC...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGTCTCCGAGTGGGCTGTaGCCAGGCAGCCCAGCACGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLSPSGL*PGSPAR
Trigger: GCGTGCTGGGCTGCCTGGTCACAGCCCACTCGGAGA...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTTGTCCACACCTGCAATaGCTTCTCTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAACPHLQ*LLCLVG
Trigger: TCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACA...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTACCTTTGTCCACACCTaGAATGCCTTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAATFVHT*NAFSVW
Trigger: CCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGLLVAA*QVQVAL
Trigger: GAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCTCTCGCTCAGACAGTaGAGCTTGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSLSLRQ*SLSWLS
Trigger: GCTGAGCCAGCTCAAGCTGCACTGTCTGAGCGAGAG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGCTGCAGCCCTTTGCTaGGGTAAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVAAALC*GKCSRS
Trigger: TGAGCGAGAGCATTTACCGCAGCAAAGGGCTGCAGC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGCTGCAGCCCTTTGCTaGGGTAAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGAAALC*GKCSRS
Trigger: TGAGCGAGAGCATTTACCGCAGCAAAGGGCTGCAGC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAGAGGAAGCCCACGCCTaGTGCCAGGAGTCATACAAA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGEEAHA*CQESYK
Trigger: TTTGTATGACTCCTGGCAGCAGGCGTGGGCTTCCTC...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGAGGAAGCCCACGCCTaGTGCCAGGAGTCATACAAA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVEEAHA*CQESYK
Trigger: TTTGTATGACTCCTGGCAGCAGGCGTGGGCTTCCTC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAATGGGCCTCTGGCGTaGAGTGGAGAAAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGNGPLA*SGERAG
Trigger: TCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGCCTCTAGGCACTCATaGGGCAGGAATCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSASRHS*GRNHSA
Trigger: GGCACTGTGATTCCTGCCCCATGAGTGCCTAGAGGC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCGCCCTGTGTCCCACGTaGGGTGATCCCTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCALCPT*GDPWWL
Trigger: GAGCCACCAGGGATCACCCCACGTGGGACACAGGGC...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATTGGACTGGTACAGCTaGAGCCCCTTCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVLDWYS*SPFSIC
Trigger: GCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATCTGTCTGGTTGGACTaGTACAGCTGGAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSVWLD*YSWSPF
Trigger: GAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACCTTCTCTGTCTGGTTaGACTGGTACAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGPSLSG*TGTAGA
Trigger: GGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTAATGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AALGRPQGLGYGEDDLAANAFSV*LDWYSW
Trigger: CCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATT...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTCGGCCCATCTCCGAGTaGGCTGTGACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVRPISE*AVTRQP
Trigger: GGGCTGCCTGGTCACAGCCCACTCGGAGATGGGCCG...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTGTGGTACTGGCTCATaGCCCGGTACTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSCGTGS*PGTSGS
Trigger: GGAGCCTGAAGTACCGGGCCATGAGCCAGTACCACA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCAGTGCAGCTTGAGCTaGCTCAGCTTGTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSQCSLS*LSLFPT
Trigger: GGTGGGGAACAAGCTGAGCCAGCTCAAGCTGCACTG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATGCAGGCACCTGAGGTaGAAGATGTGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGCRHLR*KMWEQG
Trigger: ACCTTGCTCCCACATCTTCCACCTCAGGTGCCTGCA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACTTTCTCGTAGTCCTTaGCCTGGGCATAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVLSRSP*PGHRSC
Trigger: GCAGCTTCTATGCCCAGGTCAAGGACTACGAGAAAG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTTCCGATCTCGGTCATaGTGCTCATGGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSFRSRS*CSWRSR
Trigger: ACGACTCCGCCATGAGCATCATGACCGAGATCGGAA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR TCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCCAGGAGCCCCCACCTaGGGTGGAAGATGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLPGAPT*GGRCGS
Trigger: GCTCCCACATCTTCCACCTCAGGTGGGGGCTCCTGG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGCCCCGAAGAGATCCTaGCCACCCCTGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISAPKRS*PPLSTP
Trigger: GGGGGTGGACAGGGGTGGGCAGGATCTCTTCGGGGC...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCAGCTGGGCCCTAGAGTaGCCCGAAGAGATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCSWALE*PEEILP
Trigger: GGGCAGGATCTCTTCGGGGCACTCTAGGGCCCAGCT...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATGGAATGGGGCCTGGATaGAGAGCAGGCGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYGMGPG*RAGATL
Trigger: CAGGGTGGCGCCTGCTCTCCATCCAGGCCCCATTCC...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTGGGGTGATCCCTGGTaGCTCCGTGCCTCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCWGDPW*LRASRH
Trigger: GTGCCTAGAGGCACGGAGCCACCAGGGATCACCCCA...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACA +
Preference number: 4 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASCSRR*SCETRT
Trigger: TGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGCTGGGCACCTGCCCTaGTACCAGGCAGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISAGHLP*YQAAQG
Trigger: GCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGC...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCATGCTCAGGCTGACCTaGCCTCCGAGCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCMLRLT*PPSWAP
Trigger: AGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCAT...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTGCAGGCACCTGAGGTaGAAGATGTGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSCRHLR*KMWEQG
Trigger: ACCTTGCTCCCACATCTTCCACCTCAGGTGCCTGCA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR TCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCCTTTCTCGTAGTCCTTaGCCTGGGCATAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSLSRSP*PGHRSC
Trigger: GCAGCTTCTATGCCCAGGTCAAGGACTACGAGAAAG...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR GCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATGTCCACACCTGCAATaGCTTCTCTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVCPHLQ*LLCLVG
Trigger: TCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAACCTTTGTCCACACCTaGAATGCCTTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGTFVHT*NAFSVW
Trigger: CCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTAGAAGCTGCCCAGGCTaGAGCACACGCGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVRSCPG*STRGTR
Trigger: TCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCT...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGTTGTTGACAAGCTCTaGCGCCTTGCAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSVVDKL*RLAGEE
Trigger: TTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAAC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGAACACTCCATGGCACTaGCCAGGCGGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQNTPWH*PGGPAG
Trigger: GCCTGCTGGGCCGCCTGGGCAGTGCCATGGAGTGTT...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGGAACCTCACAACGTaGGCCCGCAGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVWNLTT*ARSSRC
Trigger: GCAGCGGGAACTGCGGGCGCACGTTGTGAGGTTCCA...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCGAGCAAGGTAGGGCCTaGAGCCGGCTGTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCEQGRA*SRLFFS
Trigger: CGAGAAGAACAGCCGGCTGCAGGCCCTACCTTGCTC...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGGGGTGGGAGCCGGAATaGGGCCTGGATGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQGWEPE*GLDGEQ
Trigger: CTGCTCTCCATCCAGGCCCCATTCCGGCTCCCACCC...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATACGTGGGGTGATCCCTaGTGGCTCCGTGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYTWGDP*WLRASR
Trigger: CCTAGAGGCACGGAGCCACCAGGGATCACCCCACGT...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAAATGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVNAFSV*LDWYSW
Trigger: CCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAATGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGNAFSV*LDWYSW
Trigger: CCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCCGGGCCGTGTCGATCTaGACCACAGCGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCRAVSI*TTANFS
Trigger: GCTGAAGTTCGCTGTGGTCCAGATCGACACGGCCCG...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACA +
Preference number: 4 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGSCSRR*SCETRT
Trigger: TGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGACCTGGCCTCCGAGCTaGGCACCTGCCCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQTWPPS*APALVP
Trigger: TGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGT...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTCTCCAGGGCCTTCTaGAAGACGCTGAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLLSRAF*KTLRPR
Trigger: CCTGGGCCTCAGCGTCTTCCAGAAGGCCCTGGAGAG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCCTTCTGGAAGACGCTaGGGCCCAGGAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLPSGRR*GPGRHC
Trigger: GCAATGCCTTCCTGGGCCTCAGCGTCTTCCAGAAGG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTGTCCACACCTGCAATaGCTTCTCTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSCPHLQ*LLCLVG
Trigger: TCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCCTGGGCATAGAAGCTaGCCAGGCTGCAGCACACGC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQPGHRS*PGCSTR
Trigger: GCGTGTGCTGCAGCCTGGGCAGCTTCTATGCCCAGG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGGGCCGGTCCCCGTGCTaGAGCGCGATCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQGRSPC*SAIFID
Trigger: GTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCC...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATA +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLSGRSP*CSAIFI
Trigger: TATGAAGATCGCGCTGCAGCACGGGGACCGGCCACT...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTCCCGCTGCAGCCCTTTaGTGCGGTAAATGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVPAAAL*CGKCSR
Trigger: GCGAGAGCATTTACCGCAGCAAAGGGCTGCAGCGGG...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCAAAAGCAGCGTCGGGTaGGAGCCGGAATGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISKSSVG*EPEWGL
Trigger: CAGGCCCCATTCCGGCTCCCACCCGACGCTGCTTTT...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCCTCACAACACTCCATaGCACTGCCCAGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQPHNTP*HCPGGP
Trigger: TGGGCCGCCTGGGCAGTGCCATGGAGTGTTGTGAGG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCTCCCCACGGCTCCGGTaGATGTCAGCGAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISSPRLR*MSAKQS
Trigger: GCTCTGCTTCGCTGACATCCACCGGAGCCGTGGGGA...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGTTCTTCTCGCCTATaGACTCGCCGCACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVCSSRL*TRRTGR
Trigger: GCGGCCTGTGCGGCGAGTCCATAGGCGAGAAGAACA...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGAATCACAGTGCCAGCTaGCCCCCGAAACGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLNHSAS*PPKRGN
Trigger: GTTCCCACGTTTCGGGGGGCAGCTGGCACTGTGATT...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCCCTTCTCGATCTGCTaGTTGGTCTGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQPFSIC*LVWSCP
Trigger: GGGGCAGGACCAGACCAAGCAGCAGATCGAGAAGGG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGAGCCCCTTCTCGATCTaGTGCTTGGTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLSPFSI*CLVWSC
Trigger: GCAGGACCAGACCAAGCAGCAGATCGAGAAGGGGCT...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTCTCGCTCAGACAGTaGAGCTTGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLLSLRQ*SLSWLS
Trigger: GCTGAGCCAGCTCAAGCTGCACTGTCTGAGCGAGAG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATGCCTCCCAAAGTGCTTaGGAGACAGACGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYASQSA*ETDVRH
Trigger: GTGCCTCACGTCTGTCTCGCAAGCACTTTGGGAGGC...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATCTCGGCCTCCCAAAGTaGTTGCGAGACAGACGTGAG +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYLGLPK*LRDRRE
Trigger: CTCACGTCTGTCTCGCAAGCACTTTGGGAGGCCGAG...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCATCTGCTGCTTGGTCTaGTCCTGCCCCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISICCLV*SCPILP
Trigger: GGGGAGGATGGGGCAGGACCAGACCAAGCAGCAGAT...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTATCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACA +
Preference number: 4 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVSCSRR*SCETRT
Trigger: TGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGA...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCGCGGCACTCGAGCATaGCGTCATCATTGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLRGTRA*RHHCCG
Trigger: CCCACAACAATGATGACGCCATGCTCGAGTGCCGCG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATTGTGGTACTGGCTCATaGCCCGGTACTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYCGTGS*PGTSGS
Trigger: GGAGCCTGAAGTACCGGGCCATGAGCCAGTACCACA...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTACGGCCATGTGGTACTaGCTCATGGCCCGGTACTTC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVTAMWY*LMARYF
Trigger: GAAGTACCGGGCCATGAGCCAGTACCACATGGCCGT...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGTCCTCCACGCACTCGTaGAACCTCACAACGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQSSTHS*NLTTCA
Trigger: GGCGCACGTTGTGAGGTTCCACGAGTGCGTGGAGGA...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCAGTGCAGCTTGAGCTaGCTCAGCTCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQQCSLS*LSSRSP
Trigger: TGGGGACCTGGAGCTGAGCCAGCTCAAGCTGCACTG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGAGCCCCCACCTGAGGTaGAAGATGTGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLSPHLR*KMWEQG
Trigger: ACCTTGCTCCCACATCTTCCACCTCAGGTGGGGGCT...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGTCAGACAGTGCAGCTTaGGCTGGCTCAGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQSDSAA*AGSAPG
Trigger: ACCTGGAGCTGAGCCAGCTCAAGCTGCACTGTCTGA...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KCLRDRREAPRLAKVKCLLLVAA*QVQVAL
Trigger: GAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAG...CAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATACAGCTTCTCGTTGCTaGGTGCCAGGTTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYTASRC*VPGSGS
Trigger: GCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGT...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCGTTGTTGACAAGCTCTaGCGCCTTGCAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCVVDKL*RLAGEE
Trigger: TTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAAC...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATGCTGCAGCCCTTTGCTaGGGTAAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYAAALC*GKCSRS
Trigger: TGAGCGAGAGCATTTACCGCAGCAAAGGGCTGCAGC...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGCCTCTAGGCACTCATaGGGCAGGAATCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISASRHS*GRNHSA
Trigger: GGCACTGTGATTCCTGCCCCATGAGTGCCTAGAGGC...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGTCTCGATCTGCTGCTTaGTCTGGTCCTGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQSRSAA*SGPAPS
Trigger: GGATGGGGCAGGACCAGACCAAGCAGCAGATCGAGA...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTTGGACTGGTACAGCTaGAGCCCCTTCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVLDWYS*SPFSIC
Trigger: GCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAA...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATCCTTCTCTGTCTGGTTaGACTGGTACAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYPSLSG*TGTAGA
Trigger: GGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGG...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTCTTTCTCGTAGTCCTTaGCCTGGGCATAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVLSRSP*PGHRSC
Trigger: GCAGCTTCTATGCCCAGGTCAAGGACTACGAGAAAG...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCACCTTTGTCCACACCTaGAATGCCTTCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SACETDVRHHAWPRLSVCTFVHT*NAFSVW
Trigger: CCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGT...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCTCTGTCTGGTTGGACTaGTACAGCTGGAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISSVWLD*YSWSPF
Trigger: GAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGA...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCTTTGCCATAGTTGTTaGCAAGCTCTGCCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQLCHSC*QALPPC
Trigger: GCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGTCCACACCTGCAATaGCTTCTCTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVCPHLQ*LLCLVG
Trigger: TCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACA...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTAATGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVNAFSV*LDWYSW
Trigger: CCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATT...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR GCA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCCTTTGCTGCGGTAAATaGTCTCGCTCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: GFTMLAKMILNPGAQVISLCCGK*SRSDSA
Trigger: TGCACTGTCTGAGCGAGAGCATTTACCGCAGCAAAG...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR TCA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATTTAGTATTATTGCTGTaGTTAAGCCAGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYLVLLL*LSQLGP
Trigger: AGGGCCCAGCTGGCTTAATCACAGCAATAATACTAA...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CCA 90 bp CAAAGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACA +
Preference number: 4 (lower is better)
Translates to: QSACETDVRHHAWPRLSVSCSRR*SCETRT
Trigger: TGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGA...AACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CAA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGATGAGCGGCGGCAGTaGGGACAGCTCCGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGDERRQ*GQLRVP
Trigger: CGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCAGCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGATGAGCGGCGGCAGTaGGGACAGCTCCGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: AALGRPQGLGYGEDDLAADERRQ*GQLRVP
Trigger: CGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATC...AGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCAGCTCCGGGTCCCGTaGTTCTGCAGGCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAAQLRVP*FCRHLR
Trigger: CCTCAGGTGCCTGCAGAACAACGGGACCCGGAGCTG...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCAGGCCCAGGAAGGCATaGCCCATGCTCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAARPRKA*PMLRLT
Trigger: GGTCAGCCTGAGCATGGGCAATGCCTTCCTGGGCCT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGACTGGCCACCCAGCACTaGGCCACACCCAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGLATQH*ATPSSA
Trigger: GGCGCTGCTGGGTGTGGCCAAGTGCTGGGTGGCCAG...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGCAGGCCCCAAGGCCTaGGCTATGGTGAGGACGACC +
Preference number: 5 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGAGPKA*AMVRTT
Trigger: GGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGC...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS GCA 90 bp CCACGGCTCCGGTGGATGTCAGCGAAGCAGAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGCTGCAGCGCGATCTTCATAGACTCC +
Preference number: 5 (lower is better)
Translates to: PRLRWMSAKQSRQSA*SGRSPCCSAIFIDS
Trigger: GGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGCTGACATCCACCGGAGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS-3UTR CAA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCTCGCACAGCTTCTCGTaGCTGCGTGCCAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAASHSFS*LRARFR
Trigger: CCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGA...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCCCTGGGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCACAAGCTCTGCCGCCTaGCAGGGGAAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALGRPQGLGYGEDDLAAATSSAA*QGKNRA
Trigger: AGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGT...GGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CAA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGATTGAGCTGGCTCAGCTaGTTCCCCACCTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGLSWLS*FPTSSA
Trigger: GGCCGAGGAGGTGGGGAACAAGCTGAGCCAGCTCAA...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CAA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGATGAGCGGCGGCAGTaGGGACAGCTCCGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSDERRQ*GQLRVP
Trigger: CGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS GCA 90 bp TTCCTGGCCACCCAGCACTTGGCCACACCCAGCAGCGCCTGCACCTaGCCCAGGCGGTTTCCGATCTCGGTCATGATGCTCATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: FLATQHLATPSSACT*PRRFPISVMMLMAE
Trigger: CTCCGCCATGAGCATCATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGTGGCCAAGTGCTGGGTGGCCAGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000524487.5
ENST00000528356.1
CDS GCA 90 bp AGCGCCTTCCTGGCCACCCAGCACTTGGCCACACCCAGCAGCGCCTaGACCTGCCCCAGGCGGTTTCCGATCTCGGTCATGATGCTCATG +
Preference number: 5 (lower is better)
Translates to: SAFLATQHLATPSSA*TCPRRFPISVMMLM
Trigger: CATGAGCATCATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGTGGCCAAGTGCTGGGTGGCCAGGAAGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000524487.5
ENST00000528356.1
CDS CCA 90 bp TGTGGGAGCAAGGTAGGGCCTGCAGCCGGCTGTTCTTCTCGCCTATaGACTCGCCGCACAGGCCGCAGTAGAGCTCCGTCTCCTCCACGC +
Preference number: 5 (lower is better)
Translates to: CGSKVGPAAGCSSRL*TRRTGRSRAPSPPR
Trigger: GCGTGGAGGAGACGGAGCTCTACTGCGGCCTGTGCGGCGAGTCCATAGGCGAGAAGAACAGCCGGCTGCAGGCCCTACCTTGCTCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS-3UTR CAA 90 bp GGCAGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAACAAGCTCTGCCGCCTaGCAGGGGAAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRPQGLGYGEDDLAAAPGTSSAA*QGKNRA
Trigger: AGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGT...TCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000352508.7
CDS-3UTR CAA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTACAGCTCCGGGTCCCGTaGTTCTGCAGGCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVQLRVP*FCRHLR
Trigger: CCTCAGGTGCCTGCAGAACAACGGGACCCGGAGCTG...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS TCA 90 bp CCAGCAGCGCCTGCACCTGCCCCAGGCGGTTTCCGATCTCGGTCATaGTGCTCATGGCGGAGTCGTACCTGGGGAAGGCTGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PAAPAPAPGGFRSRS*CSWRSRTWGRLSPG
Trigger: ACCTGGAGACAGCCTTCCCCAGGTACGACTCCGCCATGAGCATCATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS GCA 90 bp GGCATTGCCCATGCTCAGGCTGACCTGGCCTCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCCAAGGCAGGTCTTGCAGTAGGAGAT +
Preference number: 5 (lower is better)
Translates to: GIAHAQADLASELGT*PGTRQPKAGLAVGD
Trigger: ATCTCCTACTGCAAGACCTGCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCATGGGCAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 90 bp GCTCCGGTGGATGTCAGCGAAGCAGAGCAGGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAGCGCGATCTTCATAGACTCCTCACA +
Preference number: 5 (lower is better)
Translates to: APVDVSEAEQAERLQ*PVPVLQRDLHRLLT
Trigger: TGTGAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGCTGACATCCACCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS CCA 90 bp GCTCCGGTGGATGTCAGCGAAGCAGAGCAGGCAGAGCGCCTGCAGTaGCCGGTCCCCGTGCTGCAGCGCGATCTTCATAGACTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: APVDVSEAEQAERLQ*PVPVLQRDLHRLLD
Trigger: GTCAAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGCTGACATCCACCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524487.5
CDS-3UTR CAA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAAGGCCCAGGAAGGCATaGCCCATGCTCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGRPRKA*PMLRLT
Trigger: GGTCAGCCTGAGCATGGGCAATGCCTTCCTGGGCCT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAATGGCATCCAGAGCCTaGTCCAGCGCCTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVMASRA*SSAFLA
Trigger: GGCCAGGAAGGCGCTGGACAAGGCTCTGGATGCCAT...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CAA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGAATGGCATCCAGAGCCTaGTCCAGCGCCTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGMASRA*SSAFLA
Trigger: GGCCAGGAAGGCGCTGGACAAGGCTCTGGATGCCAT...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CAA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCGCAGGCCCCAAGGCCTaGGCTATGGTGAGGACGACC +
Preference number: 5 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSAGPKA*AMVRTT
Trigger: GGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCTGC...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS TCA 90 bp GCCCACGCCTGCTGCCAGGAGTCATACAAAGCCAGGCTTCATGGATaGGCGGCGGCAGTTGGGACAGCTCCGGGTCCCGTTGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: AHACCQESYKARLHG*AAAVGTAPGPVVLQ
Trigger: CTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTGTATGACTCCTGGCAGCAGGCGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000528356.1
CDS GCA 90 bp GCGAAGCAGAGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTGCTaGAGCGCGATCTTCATAGACTCCTCACAACACTCCATGGCACTG +
Preference number: 5 (lower is better)
Translates to: AKQSRQSACSGRSPC*SAIFIDSSQHSMAL
Trigger: CAGTGCCATGGAGTGTTGTGAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS-3UTR CAA 90 bp GCAGTGGAGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTGCTGCCAGGATCGCACAGCTTCTCGTaGCTGCGTGCCAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: AVEKEQEWRGGSPRLLPGSHSFS*LRARFR
Trigger: CCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGA...TCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCTCCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTTGAGCTGGCTCAGCTaGTTCCCCACCTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSLSWLS*FPTSSA
Trigger: GGCCGAGGAGGTGGGGAACAAGCTGAGCCAGCTCAA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS GCA 90 bp TCAGCGAAGCAGAGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATAGACTCCTCACAACACTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: SAKQSRQSACSGRSP*CSAIFIDSSQHSMA
Trigger: TGCCATGGAGTGTTGTGAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS CCA 90 bp GGGCATAGAAGCTGCCCAGGCTGCAGCACACGCGGCACTCGAGCATaGCGTCATCATTGTTGTGGGCATAGCGCAGGGCCTTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: GHRSCPGCSTRGTRA*RHHCCGHSAGPSRS
Trigger: GCTTCGAGAAGGCCCTGCGCTATGCCCACAACAATGATGACGCCATGCTCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCTATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 90 bp AGCTTGAGCTGGCTCAGCTTGTTCCCCACCTCCTCGGCCAGATCCTaGGCTCTCTCGATGGCATCCAGAGCCTTGTCCAGCGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSWLSLFPTSSARS*ALSMASRALSSAFL
Trigger: CAGGAAGGCGCTGGACAAGGCTCTGGATGCCATCGAGAGAGCCCAGGATCTGGCCGAGGAGGTGGGGAACAAGCTGAGCCAGCTCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS-3UTR CAA 90 bp AGGCCCCAAGGCCTTGGCTATGGTGAGGACGACCTGGCAGCTGCCCCAGGAGTAGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RPQGLGYGEDDLAAAPGVAFSVW*DWYSWS
Trigger: GCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGC...TACTCCTGGGGCAGCTGCCAGGTCGTCCTCACCATAGCCAAGGCCTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS-3UTR CAA 90 bp CCTGGCAGCTGCCCCAGGAGTAAATGGGCCTCTGGCGTGCAGTGGAGAAAGAGCTCGCACAGCTTCTCGTaGCTGCGTGCCAGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGSCPRSKWASGVQWRKSSHSFS*LRARFR
Trigger: CCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGA...GCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACTCCTGGGGCAGCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS CCA 90 bp CCAGGAGTCATACAAAGCCAGGCTTCATGGATGAGCGGCGGCAGTTaGGACAGCTCCGGGTCCCGTTGTTCTGCAGGCACCTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGVIQSQASWMSGGS*DSSGSRCSAGTLSS
Trigger: GCTGGACAAGGTGCCTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTGTATGACTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528356.1
CDS CCA 90 bp GTCCACACCTGCAATGCCTTCTCTGTCTGGTTGGACTGGTACAGCTaGAGCCCCTTCTCGATCTGCTGCTTGGTCTGGTCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: VHTCNAFSVWLDWYS*SPFSICCLVWSCPI
Trigger: GATGGGGCAGGACCAGACCAAGCAGCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 90 bp CTGCCCTGGTACCAGGCAGCCCAAGGCAGGTCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACAGCTTCTCGTTGCTGCGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LPWYQAAQGRSCSRR*SCETRTASRCCVPG
Trigger: ACCTGGCACGCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGACCTGCCTTGGGCTGCCTGGTACCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS-3UTR CAA 90 bp GCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCTATAGGCCCAGGAAGGCATaGCCCATGCTCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: ACETDVRHHAWPRLSVCYRPRKA*PMLRLT
Trigger: GGTCAGCCTGAGCATGGGCAATGCCTTCCTGGGCCT...ATAGCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS TCA 90 bp GGCTCATGGCCCGGTACTTCAGGCTCCAGCCTTTGCCATAGTTGTTaGCAAGCTCTGCCGCCTTGCAGGGGAAGAACAGGGCTTTCTCGT +
Preference number: 5 (lower is better)
Translates to: GSWPGTSGSSLCHSC*QALPPCRGRTGLSR
Trigger: ACGAGAAAGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAGGCTGGAGCCTGAAGTACCGGGCCATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS-3UTR CAA 90 bp AGTGCTTGCGAGACAGACGTGAGGCACCACGCCTGGCCAAGGTTAAGTGTTTGCGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SACETDVRHHAWPRLSVCAFSVW*DWYSWS
Trigger: GCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGC...GCAAACACTTAACCTTGGCCAGGCGTGGTGCCTCACGTCTGTCTCGCAAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS GCA 90 bp GTAGGAGATGGTCTTGTGAAACTCGCACAGCTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTCCAGGAGGAAGTCGGCATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VGDGLVKLAQLLVAA*QVQVALQEEVGILQ
Trigger: CTGGAGGATGCCGACTTCCTCCTGGAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACCATCTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 90 bp AGCACCTTTGTCCACACCTGCAATGCCTTCTCTGTCTGGTTGGACTaGTACAGCTGGAGCCCCTTCTCGATCTGCTGCTTGGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: STFVHTCNAFSVWLD*YSWSPFSICCLVWS
Trigger: GGACCAGACCAAGCAGCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS-3UTR CAA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGACAAGCTCTGCCGCCTaGCAGGGGAAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQTSSAA*QGKNRA
Trigger: AGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGT...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CAA 90 bp GGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGGCCTCCCAAAGTGCTaGCGAGACAGACGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: GFTMLAKMILNPGAQVISGLPKC*RDRREA
Trigger: TGCCTCACGTCTGTCTCGCAAGCACTTTGGGAGGCC...GCTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS GCA 90 bp TGCAGTAGGAGATGGTCTTGTGAAACTCGCACAGCTTCTCGTTGCTaGGTGCCAGGTTCAGGTAGCTCTCCAGGAGGAAGTCGGCATCCT +
Preference number: 5 (lower is better)
Translates to: CSRRWSCETRTASRC*VPGSGSSPGGSRHP
Trigger: AGGATGCCGACTTCCTCCTGGAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACCATCTCCTACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS GCA 90 bp CCGGTACTTCAGGCTCCAGCCTTTGCCATAGTTGTTGACAAGCTCTaGCGCCTTGCAGGGGAAGAACAGGGCTTTCTCGTAGTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: PVLQAPAFAIVVDKL*RLAGEEQGFLVVLD
Trigger: GTCAAGGACTACGAGAAAGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAGGCTGGAGCCTGAAGTACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS GCA 90 bp TCTTGCAGTAGGAGATGGTCTTGTGAAACTCGCACAGCTTCTCGTTaGTGCGTGCCAGGTTCAGGTAGCTCTCCAGGAGGAAGTCGGCAT +
Preference number: 5 (lower is better)
Translates to: SCSRRWSCETRTASR*CVPGSGSSPGGSRH
Trigger: ATGCCGACTTCCTCCTGGAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS-3UTR CAA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGCGGGGTTTCACCATGTaGGCCAAGATGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQRGFTM*AKMILN
Trigger: GTTCAAGATCATCTTGGCCAACATGGTGAAACCCCG...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS-3UTR CAA 90 bp GGGTTTCACCATGTTGGCCAAGATGATCTTGAACCCCGGGGCTCAAGTGATCAGGCCAAGGTTAAGTGTTaGCTATTAGTATTATTGCTG +
Preference number: 5 (lower is better)
Translates to: GFHHVGQDDLEPRGSSDQAKVKC*LLVLLL
Trigger: CAGCAATAATACTAATAGCAAACACTTAACCTTGGC...CTGATCACTTGAGCCCCGGGGTTCAAGATCATCTTGGCCAACATGGTGAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529341.1
CDS GCA 72 bp CGGTGGATGTCAGCGAAGCAGAGCAGGCAGAGCGCCTaGAGTGGCCGGTCCCCGTGCTGCAGCGCGATCTTC +
Preference number: 6 (lower is better)
Translates to: RWMSAKQSRQSA*SGRSPCCSAIF
Trigger: GAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTGCTTCGCTGACATCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS GCA 72 bp CTGGCCACCCAGCACTTGGCCACACCCAGCAGCGCCTaGACCTGCCCCAGGCGGTTTCCGATCTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: LATQHLATPSSA*TCPRRFPISVM
Trigger: CATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGTGGCCAAGTGCTGGGTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000524487.5
ENST00000528356.1
CDS GCA 72 bp CATGCTCAGGCTGACCTGGCCTCCGAGCTGGGCACCTaGCCTGGTACCAGGCAGCCCAAGGCAGGTCTTGCA +
Preference number: 6 (lower is better)
Translates to: HAQADLASELGT*PGTRQPKAGLA
Trigger: TGCAAGACCTGCCTTGGGCTGCCTGGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS GCA 72 bp TCCGTCTCCTCCACGCACTCGTGGAACCTCACAACGTaGGCCCGCAGTTCCCGCTGCAGCCCTTTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVSSTHSWNLTT*ARSSRCSPLLR
Trigger: CCGCAGCAAAGGGCTGCAGCGGGAACTGCGGGCGCACGTTGTGAGGTTCCACGAGTGCGTGGAGGAGACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 72 bp CCCGTTGTTCTGCAGGCACCTTGTCCAGCGCCTTCCTaGCCACCCAGCACTTGGCCACACCCAGCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: PVVLQAPCPAPS*PPSTWPHPAAP
Trigger: AGGCGCTGCTGGGTGTGGCCAAGTGCTGGGTGGCCAGGAAGGCGCTGGACAAGGTGCCTGCAGAACAACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528356.1
CDS CAA 72 bp GATGAGCGGCGGCAGTTGGGACAGCTCCGGGTCCCGTaGTTCTGCAGGCACCTTGTCCAGCGCCTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: DERRQLGQLRVP*FCRHLVQRLPG
Trigger: GCCAGGAAGGCGCTGGACAAGGTGCCTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528356.1
CDS CAA 90 bp AAGCTCTCCAGGGCCTTCTGGAAGACGCTGAGGCCCAGGAAGGCATaGCCCATGCTCAGGCTGACCTGGCCTCCGAGCTGGGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: KLSRAFWKTLRPRKA*PMLRLTWPPSWAPA
Trigger: GGCAGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCATGGGCAATGCCTTCCTGGGCCTCAGCGTCTTCCAGAAGGCCCTGGAGAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS GCA 72 bp AGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTGCTaGAGCGCGATCTTCATAGACTCCTTGACCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRQSACSGRSPC*SAIFIDSLTWA
Trigger: TGCCCAGGTCAAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524487.5
CDS GCA 72 bp CAGAGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATAGACTCCTTGACCTGG +
Preference number: 6 (lower is better)
Translates to: QSRQSACSGRSP*CSAIFIDSLTW
Trigger: CCAGGTCAAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524487.5
CDS TCA 72 bp CCTGCACCTGCCCCAGGCGGTTTCCGATCTCGGTCATaGTGCTCATGGCGGAGTCGTACCTGGGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: PAPAPGGFRSRS*CSWRSRTWGRL
Trigger: CAGCCTTCCCCAGGTACGACTCCGCCATGAGCATCATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS GCA 72 bp AGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTGCTaGAGCGCGATCTTCATAGACTCCTCACAACACTCC +
Preference number: 6 (lower is better)
Translates to: SRQSACSGRSPC*SAIFIDSSQHS
Trigger: GGAGTGTTGTGAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS GCA 72 bp CAGAGCAGGCAGAGCGCCTGCAGTGGCCGGTCCCCGTaGTGCAGCGCGATCTTCATAGACTCCTCACAACAC +
Preference number: 6 (lower is better)
Translates to: QSRQSACSGRSP*CSAIFIDSSQH
Trigger: GTGTTGTGAGGAGTCTATGAAGATCGCGCTGCAGCACGGGGACCGGCCACTGCAGGCGCTCTGCCTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS CCA 72 bp AGCTGCCCAGGCTGCAGCACACGCGGCACTCGAGCATaGCGTCATCATTGTTGTGGGCATAGCGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SCPGCSTRGTRA*RHHCCGHSAGP
Trigger: AGGCCCTGCGCTATGCCCACAACAATGATGACGCCATGCTCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 72 bp AAGGTAGGGCCTGCAGCCGGCTGTTCTTCTCGCCTATaGACTCGCCGCACAGGCCGCAGTAGAGCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: KVGPAAGCSSRL*TRRTGRSRAPS
Trigger: AGACGGAGCTCTACTGCGGCCTGTGCGGCGAGTCCATAGGCGAGAAGAACAGCCGGCTGCAGGCCCTACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CAA 72 bp GATGAGCGGCGGCAGTTGGGACAGCTCCGGGTCCCGTaGTTCTGCAGGCACCTGAGGTGGAAGATGTGGGAG +
Preference number: 6 (lower is better)
Translates to: DERRQLGQLRVP*FCRHLRWKMWE
Trigger: CTCCCACATCTTCCACCTCAGGTGCCTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS CAA 90 bp GCCAGGAGTCATACAAAGCCAGGCTTCATGGATGAGCGGCGGCAGTaGGGACAGCTCCGGGTCCCGTTGTTCTGCAGGCACCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ARSHTKPGFMDERRQ*GQLRVPLFCRHLRW
Trigger: CCACCTCAGGTGCCTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTGTATGACTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
CDS CCA 72 bp TGGCTCAGCTTGTTCCCCACCTCCTCGGCCAGATCCTaGGCTCTCTCGATGGCATCCAGAGCCTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: WLSLFPTSSARS*ALSMASRALSS
Trigger: GCTGGACAAGGCTCTGGATGCCATCGAGAGAGCCCAGGATCTGGCCGAGGAGGTGGGGAACAAGCTGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298854.7
ENST00000524487.5
CDS CAA 90 bp GCCAGGAGTCATACAAAGCCAGGCTTCATGGATGAGCGGCGGCAGTaGGGACAGCTCCGGGTCCCGTTGTTCTGCAGGCACCTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: ARSHTKPGFMDERRQ*GQLRVPLFCRHLVQ
Trigger: CTGGACAAGGTGCCTGCAGAACAACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTGTATGACTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528356.1
CDS TCA 72 bp TGCTGCCAGGAGTCATACAAAGCCAGGCTTCATGGATaGGCGGCGGCAGTTGGGACAGCTCCGGGTCCCGTT +
Preference number: 6 (lower is better)
Translates to: CCQESYKARLHG*AAAVGTAPGPV
Trigger: AACGGGACCCGGAGCTGTCCCAACTGCCGCCGCTCATCCATGAAGCCTGGCTTTGTATGACTCCTGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000528356.1
CDS GCA 72 bp TCACAACGTGCGCCCGCAGTTCCCGCTGCAGCCCTTTaGTGCGGTAAATGCTCTCGCTCAGACAGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: SQRAPAVPAAAL*CGKCSRSDSAA
Trigger: AGCTGCACTGTCTGAGCGAGAGCATTTACCGCAGCAAAGGGCTGCAGCGGGAACTGCGGGCGCACGTTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS TCA 72 bp CCCGGTACTTCAGGCTCCAGCCTTTGCCATAGTTGTTaGCAAGCTCTGCCGCCTTGCAGGGGAAGAACAGGG +
Preference number: 6 (lower is better)
Translates to: PGTSGSSLCHSC*QALPPCRGRTG
Trigger: CCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAGGCTGGAGCCTGAAGTACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000529341.1
CDS GCA 72 bp GGTCTTGTGAAACTCGCACAGCTTCTCGTTGCTGCGTaGCAGGTTCAGGTAGCTCTCCAGGAGGAAGTCGGC +
Preference number: 6 (lower is better)
Translates to: GLVKLAQLLVAA*QVQVALQEEVG
Trigger: GCCGACTTCCTCCTGGAGAGCTACCTGAACCTGGCACGCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS GCA 72 bp AGAAAGAGCAGGAGTGGCGAGGAGGAAGCCCACGCCTaGTGCCAGGAGTCATACAAAGCCAGGCTTCATGGA +
Preference number: 6 (lower is better)
Translates to: RKSRSGEEEAHA*CQESYKARLHG
Trigger: TCCATGAAGCCTGGCTTTGTATGACTCCTGGCAGCAGGCGTGGGCTTCCTCCTCGCCACTCCTGCTCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000528356.1
CDS CCA 72 bp GTCCACACCTGCAATGCCTTCTCTGTCTGGTTGGACTaGTACAGCTGGAGCCCCTTCTCGATCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: VHTCNAFSVWLD*YSWSPFSICCL
Trigger: CAAGCAGCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 72 bp CCTTTGTCCACACCTGCAATGCCTTCTCTGTCTGGTTaGACTGGTACAGCTGGAGCCCCTTCTCGATCTGCT +
Preference number: 6 (lower is better)
Translates to: PLSTPAMPSLSG*TGTAGAPSRSA
Trigger: AGCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 72 bp AGCACCTTTGTCCACACCTGCAATGCCTTCTCTGTCTaGTTGGACTGGTACAGCTGGAGCCCCTTCTCGATC +
Preference number: 6 (lower is better)
Translates to: STFVHTCNAFSV*LDWYSWSPFSI
Trigger: GATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CCA 72 bp TACCAGGCAGCCCAAGGCAGGTCTTGCAGTAGGAGATaGTCTTGTGAAACTCGCACAGCTTCTCGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: YQAAQGRSCSRR*SCETRTASRCC
Trigger: GCAGCAACGAGAAGCTGTGCGAGTTTCACAAGACCATCTCCTACTGCAAGACCTGCCTTGGGCTGCCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1
CDS CAA 72 bp ACCTTTGTCCACACCTGCAATGCCTTCTCTGTCTGGTaGGACTGGTACAGCTGGAGCCCCTTCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: TFVHTCNAFSVW*DWYSWSPFSIC
Trigger: GCAGATCGAGAAGGGGCTCCAGCTGTACCAGTCCAACCAGACAGAGAAGGCATTGCAGGTGTGGACAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298854.7
ENST00000352508.7
ENST00000524487.5
ENST00000529341.1