RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEFL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108352

Ensembl transcript IDs: ENST00000264644.10, ENST00000456989.6, ENST00000469209.1, ENST00000496032.1, ENST00000538884.1, ENST00000538981.1, ENST00000541245.1, ENST00000543876.5, ENST00000544503.5, ENST00000545893.5, ENST00000620260.6

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCCTGGGCAGGCATCAAGGCTAGGGGTAAGCAGCAGCCAAGACTaGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTGGTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: VPGQASRLGVSSSQD*ASGSQCPTQRVVAA
Trigger: AGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCCAGTCTTGGCTGCTGCTTACCCCTAGCCTTGATGCCTGCCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp CTGGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTGGTGGCAGCTaGAGTTCCAAGGCTGTTGGAAGGGGTCAGGAGGAAGGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: LGQWVPVSDPEGGGS*SSKAVGRGQEEGWE
Trigger: TTCCCAGCCTTCCTCCTGACCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp GCCAAGACTGGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTGGTaGCAGCTGGAGTTCCAAGGCTGTTGGAAGGGGTCAGGAGGAAGG +
Preference number: 1 (lower is better)
Translates to: AKTGPVGPSVRPRGW*QLEFQGCWKGSGGR
Trigger: CCTTCCTCCTGACCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCCAGTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp GCAGCCAAGACTGGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTaGTGGCAGCTGGAGTTCCAAGGCTGTTGGAAGGGGTCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: AAKTGPVGPSVRPRG*WQLEFQGCWKGSGG
Trigger: TCCTCCTGACCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCCAGTCTTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 90 bp CCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCAGTAGCTaGCAGGAGCCCCTGCACCCCTCAGGCCTTGAGGCTGGTGATGGG +
Preference number: 1 (lower is better)
Translates to: PERRVSLCQETSPSS*QEPLHPSGLEAGDG
Trigger: CCCATCACCAGCCTCAAGGCCTGAGGGGTGCAGGGGCTCCTGGCAGCTACTGGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR TCA 90 bp CTACCCGAGCCCACTGCAAGGCAGGGGGAGGGTCCTCTAGGCAGCTaGGGCCTGTGTTTCCCTGAGCATCTTTTACCCTCTCATCAGAGC +
Preference number: 1 (lower is better)
Translates to: LPEPTARQGEGPLGS*GLCFPEHLLPSHQS
Trigger: GCTCTGATGAGAGGGTAAAAGATGCTCAGGGAAACACAGGCCTCAGCTGCCTAGAGGACCCTCCCCCTGCCTTGCAGTGGGCTCGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp ATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTaGTGGAGAAGAAGGCTGCCAATCCCTCCCACAATCCCACTCTGC +
Preference number: 1 (lower is better)
Translates to: IFLGVPALTRKKLDR*WRRRLPIPPTIPLC
Trigger: GCAGAGTGGGATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp GGGAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATaGGACACAGCACCTCCTATGTCCATAGAGGATTTTTGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: GSRRGPMGHCQGKRA*DTAPPMSIEDFCCR
Trigger: CCTGCAGCAAAAATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 90 bp CACCCAGCGGTTTCTGCAATGACAACCGCGCCTGTACAATACACATaGTTCACTCTGTTAAAGCTGCAGGGCAACGGGAGGGGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: HPAVSAMTTAPVQYT*FTLLKLQGNGRGLG
Trigger: CCCCAGCCCCCTCCCGTTGCCCTGCAGCTTTAACAGAGTGAACCATGTGTATTGTACAGGCGCGGTTGTCATTGCAGAAACCGCTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 90 bp GAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACT +
Preference number: 1 (lower is better)
Translates to: ERCQMLVETSCKVLE*QVPKDLAGLTGAST
Trigger: AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR GCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTG +
Preference number: 1 (lower is better)
Translates to: EVAPRERCQMLVETS*KVLECQVPKDLAGL
Trigger: CAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR GCA 90 bp CACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTaGTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCG +
Preference number: 1 (lower is better)
Translates to: HNPTLQDRRVSSILS*CKRKLEAPSPEQIS
Trigger: CGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR CCA 90 bp GCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATaGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTTTCTCAGAGG +
Preference number: 1 (lower is better)
Translates to: AARGSWKLHPQNRSR*EDIEEGAFYPLSQR
Trigger: CCTCTGAGAAAGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR TCA 90 bp GTCAAAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATaGGCCAGAAGGGGGATGTCAACTCCCTCCTTAGCAGTTAGATAT +
Preference number: 1 (lower is better)
Translates to: VKERGTETMLLVSDT*ARRGMSTPSLAVRY
Trigger: ATATCTAACTGCTAAGGAGGGAGTTGACATCCCCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 90 bp AGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTTTTGCTaGAGGAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACAT +
Preference number: 1 (lower is better)
Translates to: RAWDTAPPMSIEDFC*RNKTDHCIKGSVQH
Trigger: ATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 90 bp AAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTTTTaGTGCAGGAACAAGACAGATCACTGTATAAAAGGGTCTGTACAA +
Preference number: 1 (lower is better)
Translates to: KRAWDTAPPMSIEDF*CRNKTDHCIKGSVQ
Trigger: TTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAGCAGCAGCTGCTTTTaGTACGGCTGTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSSSSCF*YGCCCL
Trigger: GAGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCT...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAAGCTGGACAGGTGGTaGAGAAGAAGGCTGCCAATC +
Preference number: 2 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSKLDRW*RRRLPI
Trigger: GATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTT...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCCAAAAAGCAGGAGTGTaGGCAGCAGACAACCCTAGC +
Preference number: 2 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSQKAGV*AADNPS
Trigger: GCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTG...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR TCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTAGACCTTCCAGAGGCCTaGGTGGGGGACTTGCAAGGG +
Preference number: 2 (lower is better)
Translates to: PKKQECGQQTTLAPDTALDLPEA*VGDLQG
Trigger: CCCTTGCAAGTCCCCCACTCAGGCCTCTGGAAGGTC...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTCGTGGAGCAGGAAGTTaGTCCACGGGAAAGATGTCA +
Preference number: 2 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTRGAGS*STGKMS
Trigger: TGACATCTTTCCCGTGGAGCAACTTCCTGCTCCACG...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GKEVVPERRVSLCQETSPGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATCCTGCTGCTACTCCCTaGCCCAAAAAGCAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDPAATP*PKKQLG
Trigger: GCCAAGCTGCTTTTTGGGGCAGGGAGTAGCAGCAGG...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATCCCACCCCAGCTCTATaGGGAGGACAAAGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDPTPAL*GGQRES
Trigger: ACTCTCCCTTTGTCCTCCCCATAGAGCTGGGGTGGG...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR TCA 90 bp CATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGGGGACTTCAGCAGGATaGACAGACTTATGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: HNIPGGPSPDQEEAGQVVGTSAG*TDLWVQ
Trigger: CTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCCC...CACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAATGCTTGAGTGCCAGGTaGCCAAGGATCTGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQCLSAR*PRIWRV
Trigger: GACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCA...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGGTGGAGAAGAAGGCTaGCAATCCCTCCCACAATCC +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDGGEEG*QSLPQS
Trigger: GGATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp AAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATGAGCCAGAAGGGTCACAAGCCTGGGCATaGAGGGCAGCACGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: KREGQRPCCWCQTHEPEGSQAWA*RAARGA
Trigger: AGCTCCTCGTGCTGCCCTGCATGCCCAGGCTTGTGA...CCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTAGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PKKQECGQQTTLAPDTALGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATCCCCAAAAAGCAGCTTaGCTCACAAGCCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDPQKAA*LTSLGM
Trigger: CATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGG...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CAA 90 bp CCGTGGAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATC +
Preference number: 2 (lower is better)
Translates to: PWSRKLLHGKDVRCW*RHRAKCLSARCPRI
Trigger: GATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGAGTGTAGTTTTGGCTTaGAGGAGCAATGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWSVVLA*RSNGEG
Trigger: CCCCTCCCCATTGCTCCTTCAAGCCAAAACTACACT...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR TCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTTGGTGTCAGACACATaGGCCAGAAGGGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDLVSDT*ARRGMS
Trigger: TGACATCCCCCTTCTGGCTCATGTGTCTGACACCAA...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTATCGACCTCTTTCCCGTaGAGCAGGAAGTTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PKKQECGQQTTLAPDTALSTSFP*SRKLLH
Trigger: GTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGA...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTATCGTGCAAAGTGCTTaGGTGCCAGGTGCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPIVQSA*VPGAQG
Trigger: TCCTTGGGCACCTGGCACTCAAGCACTTTGCACGAT...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGCAAGACAGAAGGGTaGGCAGCATTCTTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWCKTEG*AAFFPA
Trigger: AGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCA...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 2 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR GCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAGACATCGTGCAAAGTaGTTGAGTGCCAGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRRHRAK*LSARCP
Trigger: TGGGCACCTGGCACTCAAGCACTTTGCACGATGTCT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR GCA 90 bp AAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATGAGCCAGAAGGGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 2 (lower is better)
Translates to: KREGQRPCCWCQTHEPEGCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...CCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCAAGAAGCTGGACAGGTaGTGGAGAAGAAGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: RGVKVIKALPESSGAFTVKKLDR*WRRRLP
Trigger: TGGCAGCCTTCTTCTCCACCACCTGTCCAGCTTCTT...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CAA 90 bp CAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGAGGAAGTaGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGA +
Preference number: 2 (lower is better)
Translates to: QDRRVSSILSCCKRK*EAPSPEQISMGGHR
Trigger: TCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGAGGGACTTCAGCAGGATaGACAGACTTATGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRGTSAG*TDLWVQ
Trigger: CTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCCC...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCAGGCCTGTGTTTCCCTaGGCATCTTTTACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: RGVKVIKALPESSGAFTVRPVFP*ASFTLS
Trigger: TGAGAGGGTAAAAGATGCTCAGGGAAACACAGGCCT...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR GCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 2 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR GCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQLVETS*KVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAA...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR GCA 90 bp AAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATGAGCCAGAAGGGTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: KREGQRPCCWCQTHEPEGLVETS*KVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAA...CCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAACAGAACAGATCTCGATaGGAGGACATAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQQNRSR*EDIEEG
Trigger: TCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTG...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCATGTCAGATGTTGGTTaGGACATCGTGCAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFMSDVG*DIVQSA
Trigger: AGCACTTTGCACGATGTCTCAACCAACATCTGACAT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR TCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTACAATGTTCACATATaGTACAAGGCTCTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDYNVHI*YKALSL
Trigger: GAGGGAAAGAGCCTTGTATCATATGTGAACATTGTA...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTAAAAGATGTCAGATGTTaGTTGAGACATCGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: PKKQECGQQTTLAPDTALKDVRC*LRHRAK
Trigger: CTTTGCACGATGTCTCAACCAACATCTGACATCTTT...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAACAGAACAGATCTCGATaGGAGGACATAGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQQNRSR*EDIEEG
Trigger: TCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTG...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 72 bp GGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTGGTaGCAGCTGGAGTTCCAAGGCTGTTGGAAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: GPVGPSVRPRGW*QLEFQGCWKGS
Trigger: TGACCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 72 bp ACTGGGCCAGTGGGTCCCAGTGTCCGACCCAGAGGGTaGTGGCAGCTGGAGTTCCAAGGCTGTTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: TGPVGPSVRPRG*WQLEFQGCWKG
Trigger: CCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCACTGGCCCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 72 bp AGGGTGAGTCTGTGCCAGGAAACCTCACCCAGTAGCTaGCAGGAGCCCCTGCACCCCTCAGGCCTTGAGGCT +
Preference number: 3 (lower is better)
Translates to: RVSLCQETSPSS*QEPLHPSGLEA
Trigger: AGCCTCAAGGCCTGAGGGGTGCAGGGGCTCCTGGCAGCTACTGGGTGAGGTTTCCTGGCACAGACTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 72 bp TGGGTCCCAGTGTCCGACCCAGAGGGTGGTGGCAGCTaGAGTTCCAAGGCTGTTGGAAGGGGTCAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: WVPVSDPEGGGS*SSKAVGRGQEE
Trigger: TTCCTCCTGACCCCTTCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGACACTGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR TCA 72 bp TCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTaGGTGGGGGACTTGCAAGGGCTGATGGGTAACCCC +
Preference number: 3 (lower is better)
Translates to: SHQSPSLDLPEA*VGDLQGLMGNP
Trigger: GGGGTTACCCATCAGCCCTTGCAAGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 72 bp GGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTaGTGGAGAAGAAGGCTGCCAATCCCTCCCACAATC +
Preference number: 3 (lower is better)
Translates to: GVPALTRKKLDR*WRRRLPIPPTI
Trigger: GATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CAA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGCCCCAAAAAGCAGCTaGGCTCACAAGCCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTAPKSS*AHKPGH
Trigger: ATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGGC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR TCA 72 bp AAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTaGTACTGCTCTACCCGAGCCCACTGCAAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: KAGVWAADNPSS*YCSTRAHCKAG
Trigger: CCCTGCCTTGCAGTGGGCTCGGGTAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR CCA 72 bp GGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTaGCGCCTTTACAGTCTCTGCCATCCCCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: GSKGNKGLARVQ*RLYSLCHPPPP
Trigger: TGGGGGAGGGGGATGGCAGAGACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CAA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGAGCAGCAGCTGCTTTaGCTACGGCTGTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDEQQLL*LRLLLS
Trigger: AGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCTC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 72 bp CAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGA +
Preference number: 3 (lower is better)
Translates to: QMLVETSCKVLE*QVPKDLAGLTG
Trigger: TCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR CAA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGACATCGTGCAAAGTGCTaGAGTGCCAGGTGCCCAAGG +
Preference number: 3 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRHRAKC*SARCPR
Trigger: CCTTGGGCACCTGGCACTCAAGCACTTTGCACGATG...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR TCA 72 bp CTTCAAAAGGGAAAGAGGTGGTGCCAGAAAGAAGGGTaGGTCTGTGCCAGGAAACCTCACCCAGTAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LQKGKRWCQKEG*VCARKPHPVAA
Trigger: GGCAGCTACTGGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCCTTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CAA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCATCGTGCAAAGTGCTaGAGTGCCAGGTGCCCAAGG +
Preference number: 3 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSHRAKC*SARCPR
Trigger: CCTTGGGCACCTGGCACTCAAGCACTTTGCACGATG...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR TCA 72 bp AGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATaGGCCAGAAGGGGGATGTCAACTCCCTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: RGTETMLLVSDT*ARRGMSTPSLA
Trigger: TGCTAAGGAGGGAGTTGACATCCCCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 72 bp AAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTaGTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTC +
Preference number: 3 (lower is better)
Translates to: KDVRCWLRHRAK*LSARCPRIWRV
Trigger: GACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR GCA 72 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTG +
Preference number: 3 (lower is better)
Translates to: PRERCQMLVETS*KVLECQVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR CAA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAAAGTGTAGTTTTGGCTaGAAGGAGCAATGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRKCSFG*KEQWGG
Trigger: CCCTCCCCATTGCTCCTTCAAGCCAAAACTACACTT...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR CCA 72 bp AGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTaGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGG +
Preference number: 3 (lower is better)
Translates to: SRKLLHGKDVRC*LRHRAKCLSAR
Trigger: CCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR CCA 72 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATaGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTT +
Preference number: 3 (lower is better)
Translates to: GSWKLHPQNRSR*EDIEEGAFYPL
Trigger: AAGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR CCA 72 bp GTTTCTGCAATGACAACCGCGCCTGTACAATACACATaGTTCACTCTGTTAAAGCTGCAGGGCAACGGGAGG +
Preference number: 3 (lower is better)
Translates to: VSAMTTAPVQYT*FTLLKLQGNGR
Trigger: CCTCCCGTTGCCCTGCAGCTTTAACAGAGTGAACCATGTGTATTGTACAGGCGCGGTTGTCATTGCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CAA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQDVRCW*RHRAKC
Trigger: GCACTTTGCACGATGTCTCAACCAACATCTGACATC...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR CAA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: APSPEQISMGGHRGRSFLDVRCW*RHRAKC
Trigger: GCACTTTGCACGATGTCTCAACCAACATCTGACATC...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR-3UTR CAA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATAAGTGTAGTTTTGGCTaGAAGGAGCAATGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDKCSFG*KEQWGG
Trigger: CCCTCCCCATTGCTCCTTCAAGCCAAAACTACACTT...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR TCA 72 bp TTTATCGGCTTCTTCTCCACCCAGCGGTTTCTGCAATaGCAACCGCGCCTGTACAATACACATGGTTCACTC +
Preference number: 3 (lower is better)
Translates to: FIGFFSTQRFLQ*QPRLYNTHGSL
Trigger: GAGTGAACCATGTGTATTGTACAGGCGCGGTTGTCATTGCAGAAACCGCTGGGTGGAGAAGAAGCCGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR-3UTR CAA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGGAAAGATGTCAGATGTaGGTTGAGACATCGTGCAAA +
Preference number: 3 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRERCQM*VETSCK
Trigger: TTTGCACGATGTCTCAACCAACATCTGACATCTTTC...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR GCA 72 bp TGGGACACAGCACCTCCTATGTCCATAGAGGATTTTTaGTGCAGGAACAAGACAGATCACTGTATAAAAGGG +
Preference number: 3 (lower is better)
Translates to: WDTAPPMSIEDF*CRNKTDHCIKG
Trigger: CCCTTTTATACAGTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGACATAGGAGGTGCTGTGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
3UTR GCA 72 bp GACACAGCACCTCCTATGTCCATAGAGGATTTTTGCTaGAGGAACAAGACAGATCACTGTATAAAAGGGTCT +
Preference number: 3 (lower is better)
Translates to: DTAPPMSIEDFC*RNKTDHCIKGS
Trigger: AGACCCTTTTATACAGTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGACATAGGAGGTGCTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCTGGCCACCCAGTGCGTaGCCTCGCTGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSWPPSA*PRCSAA
Trigger: TGCAGCGCTGCAGCGAGGTCACGCACTGGGTGGCCA...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCATCGGTGGCCACCCAGTaGGTGACCTCGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTASVATQ*VTSLQR
Trigger: GCGCTGCAGCGAGGTCACGCACTGGGTGGCCACCGA...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCTGGGGGTCCCAGCCCTaGCCAGGAAGAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSWGSQP*PGRSWT
Trigger: TGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCA...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACACAGCTACCAGGATaGGGGAATCCTCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSTQLPG*GNPHAP
Trigger: CGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGT...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGGCAGCTGCGCGCGCTTaGCCGGGGCCTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRAAARA*PGPRRA
Trigger: TGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGC...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGGCAGCAGCTCCAAGTTaGCCGTCTCCCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: HNIPGGPSPDQEEAGQVVAAAPS*PSPGGR
Trigger: GCGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGC...CACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGCAGCAGCTCCAAGTTaGCCGTCTCCCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTAAAPS*PSPGGR
Trigger: GCGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGC...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGTGGCCACCCAGTGCGTaGCCTCGCTGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRWPPSA*PRCSAA
Trigger: TGCAGCGCTGCAGCGAGGTCACGCACTGGGTGGCCA...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGGGACTTGCAAGGGCTaGTGGGTAACCCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTGTCKG*WVTPPT
Trigger: GGTGGGAGGGGTTACCCATCAGCCCTTGCAAGTCCC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGACCTTCCAGAGGCCTaGGTGGGGGACTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTDLPEA*VGDLQG
Trigger: CCCTTGCAAGTCCCCCACTCAGGCCTCTGGAAGGTC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGCAGCTGCGCGCGCTTaGCCGGGGCCTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQAAARA*PGPRRA
Trigger: TGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGC...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCCCTGCTGCTACTCCCTaGCCCAAAAAGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSPAATP*PKKQLG
Trigger: GCCAAGCTGCTTTTTGGGGCAGGGAGTAGCAGCAGG...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAACCCGGTTCAGAAGATaGTCGGGCCGCTCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRTRFRR*SGRSGA
Trigger: CGCCCCCGAGCGGCCCGAGCATCTTCTGAACCGGGT...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR CCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGCTGAGCAGGGAGTGTaGGGGTGGAGAAAGCACCCC +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTAEQGV*GWRKHP
Trigger: GGGGTGCTTTCTCCACCCCCACACTCCCTGCTCAGC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTGTCCTGCACAGATGCTaGAAGGCGGCTGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTVLHRC*KAAAYG
Trigger: ACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGAC...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTACACAGCTACCAGGATaGGGGAATCCTCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTTQLPG*GNPHAP
Trigger: CGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGT...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTGCCCTCCATGCCTCCTaGCCGAACAAAGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTALHAS*PNKVLV
Trigger: CACCAGTACTTTGTTCGGGCAGGAGGCATGGAGGGC...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAGCAGCTGCGCGCGCTTaGCCGGGGCCTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRAAARA*PGPRRA
Trigger: TGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGC...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCACCCAGCGGTTTCTaGAATGACAACCGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTAPPSGF*NDNRAC
Trigger: ACAGGCGCGGTTGTCATTGCAGAAACCGCTGGGTGG...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGTGGCCACCCAGTGCGTaGCCTCGCTGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRWPPSA*PRCSAA
Trigger: TGCAGCGCTGCAGCGAGGTCACGCACTGGGTGGCCA...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGGGACTTGCAAGGGCTaGTGGGTAACCCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRGTCKG*WVTPPT
Trigger: GGTGGGAGGGGTTACCCATCAGCCCTTGCAAGTCCC...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGAGGCGAGACACGCTCTaGCGCCGCTGCAACGACCGC +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKRRDTL*RRCNDR
Trigger: GCGGTCGTTGCAGCGGCGTCAGAGCGTGTCTCGCCT...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR GCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGCCCTCCATGCCTCCTaGCCGAACAAAGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTALHAS*PNKVLV
Trigger: CACCAGTACTTTGTTCGGGCAGGAGGCATGGAGGGC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGTCGGTGGCCACCCAGTaGGTGACCTCGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQSVATQ*VTSLQR
Trigger: GCGCTGCAGCGAGGTCACGCACTGGGTGGCCACCGA...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGAACTTCTTGAGCAGCTaGGCGCGCTTGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWNFLSS*ARLPGA
Trigger: GGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTT...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACCTCACCCAGTAGCTaGCAGGAGCCCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRTSPSS*QEPLHP
Trigger: GGGGTGCAGGGGCTCCTGGCAGCTACTGGGTGAGGT...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACACCTGCTTGCTGGGTaGCTGGTTCTCCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTAHLLAG*LVLLWN
Trigger: ATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTG...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTTGGTCTGCAGGTGATTaGGGGATGCCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTWSAGD*GMPPCP
Trigger: TGGACATGGAGGCATCCCCCAATCACCTGCAGACCA...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGACAGGGAGTGTGGGGGTaGAGAAAGCACCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRQGVWG*RKHPAP
Trigger: TGGTGCGGGGTGCTTTCTCCACCCCCACACTCCCTG...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTCTTGCCAGAGTCCAGTaGCGCCTTTACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTLARVQ*RLYSLC
Trigger: GCAGAGACTGTAAAGGCGCCACTGGACTCTGGCAAG...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGACGACCCAGAGGGTGGTaGCAGCTGGAGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRRPRGW*QLEFQG
Trigger: GCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCG...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATTGCCAGGCGCCAGACTaGGGGCCAGAGGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDCQAPD*GPEGPS
Trigger: GCTCGGCCCCTCTGGCCCCCAGTCTGGCGCCTGGCA...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR TCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTGGAAAGTCAGGTCTTTaGGGATCAGAGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTGKSGL*GSEARR
Trigger: CCTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCC...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGCCTTGGTCTGCAGGTaGTTGGGGGATGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTALVCR*LGDASM
Trigger: CATGGAGGCATCCCCCAATCACCTGCAGACCAAGGC...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAAGTGTAGTTTTGGCTTaGAGGAGCAATGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTASVVLA*RSNGEG
Trigger: CCCCTCCCCATTGCTCCTTCAAGCCAAAACTACACT...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTCAGCGGTTTCTGCAATaGCAACCGCGCCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTQRFLQ*QPRLYN
Trigger: ATTGTACAGGCGCGGTTGTCATTGCAGAAACCGCTG...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGGGACAGCTCGTCAGATaGGTAGGAGGAAGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRGQLVR*VGGRGA
Trigger: CGCTCCCCTTCCTCCTACTCATCTGACGAGCTGTCC...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAAAGGCCACCCGGGTCTaGAGACAGGAGTCTATCCGG +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRKATRV*RQESIR
Trigger: CCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTT...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTAAACTTCTTGAGCAGCTaGGCGCGCTTGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PKKQECGQQTTLAPDTALNFLSS*ARLPGA
Trigger: GGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTT...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGATGCTTGAGTGCCAGGTaGCCAAGGATCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRCLSAR*PRIWRV
Trigger: GACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCA...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGGTGGAGAAGAAGGCTaGCAATCCCTCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTGGEEG*QSLPQS
Trigger: GGATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGATCACAAGCCTGGGCATaGAGGGCAGCACGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRSQAWA*RAARGA
Trigger: AGCTCCTCGTGCTGCCCTGCATGCCCAGGCTTGTGA...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCGCTGCCAGGAGCCCCTaGACCCCTCAGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLAARSP*TPQALR
Trigger: CCTCAAGGCCTGAGGGGTGCAGGGGCTCCTGGCAGC...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCGCTGCCAGGAGCCCCTaGACCCCTCAGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPAARSP*TPQALR
Trigger: CCTCAAGGCCTGAGGGGTGCAGGGGCTCCTGGCAGC...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAAGCAGCAGCTGCTTTTaGTACGGCTGTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTASSSCF*YGCCCL
Trigger: GAGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCT...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGTTCGGCCCGCCAGCTaGGACGTCTGCTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRVRPAS*DVCFFR
Trigger: TCTGAAGAAGCAGACGTCGCAGCTGGCGGGCCGAAC...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR CCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTAGATCCTTGATGATGTaGCCGGCCCCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTRSLMM*PAPSSS
Trigger: AGAGGAAGAGGGGGCCGGCCACATCATCAAGGATCT...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGACCGTCTCCACCAGCTaGTGCAGCCTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRTVSTS*CSLRVS
Trigger: GGACACTCTGAGGCTGCACCAGCTGGTGGAGACGGT...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCGCAGCAGCTCCAAGTTaGCCGTCTCCCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECAAAPS*PSPGGR
Trigger: GCGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGC...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGCTGAGCAGGGAGTGTaGGGGTGGAGAAAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEAEQGV*GWRKHP
Trigger: GGGGTGCTTTCTCCACCCCCACACTCCCTGCTCAGC...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTCTTGGCTCACAAGCCTaGGCATGCAGGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTLGSQA*ACRAAR
Trigger: TCGTGCTGCCCTGCATGCCCAGGCTTGTGAGCCAAG...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAAGCAGCAGCCAAGACTaGGCCAGTGGGTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRSSSQD*ASGSQC
Trigger: ACACTGGGACCCACTGGCCCAGTCTTGGCTGCTGCT...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCGGGGCTGGGGGTCCCTaGGCAGGCATCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLGAGGP*AGIKAR
Trigger: CCTAGCCTTGATGCCTGCCCAGGGACCCCCAGCCCC...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCGGGGCCGAGCCTCGCTaGCCAGAGTCCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECGAEPR*PESSGQ
Trigger: CTGGCCACTGGACTCTGGCCAGCGAGGCTCGGCCCC...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR TCA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGTGGGGGTCCCAGCCCTaGCCAGGAAGAAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLWGSQP*PGRSWT
Trigger: TGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCA...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCGACAACCCTAGCTCCTaGTACTGCTCTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPDNPSS*YCSTRA
Trigger: GGCTCGGGTAGAGCAGTATCAGGAGCTAGGGTTGTC...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTTGCCAGAAAGAAGGGTaGGTCTGTGCCAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTCQKEG*VCARKP
Trigger: AGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCA...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGAAGGCCACCCGGGTCTaGAGACAGGAGTCTATCCGG +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEKATRV*RQESIR
Trigger: CCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTT...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTTCGGTGGCCACCCAGTaGGTGACCTCGCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSSVATQ*VTSLQR
Trigger: GCGCTGCAGCGAGGTCACGCACTGGGTGGCCACCGA...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTAGACATCGTGCAAAGTaGTTGAGTGCCAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTRHRAK*LSARCP
Trigger: TGGGCACCTGGCACTCAAGCACTTTGCACGATGTCT...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSLVETS*KVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAA...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAACCTCACCCAGTAGCTaGCAGGAGCCCCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLTSPSS*QEPLHP
Trigger: GGGGTGCAGGGGCTCCTGGCAGCTACTGGGTGAGGT...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGTCTATCCGGCGGAAGTaGCGGAAGAGTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: HNIPGGPSPDQEEAGQVVSIRRK*RKSGFT
Trigger: GGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGA...CACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGTCAGGCTCCACTCGGTaGATCTCTGTGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HNIPGGPSPDQEEAGQVVSGSTR*ISVSPG
Trigger: CCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGA...CACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTTCAGGCTCCACTCGGTaGATCTCTGTGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTSGSTR*ISVSPG
Trigger: CCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGA...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGGGCGCACATAGGCCTTaGTCTGCAGGTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRGAHRP*SAGDWG
Trigger: CCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCC...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGTCCGACCCAGAGGGTaGTGGCAGCTGGAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDVRPRG*WQLEFQ
Trigger: TTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGAC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGACACAGCTACCAGGATaGGGGAATCCTCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRTQLPG*GNPHAP
Trigger: CGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATCGTTGTCCAGCCCCATaGCCACGGCGTAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDRCPAP*PRRRKT
Trigger: TGTCTTTCTACGCCGTGGTCATGGGGCTGGACAACG...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGCCTTGGTCTGCAGGTaGTTGGGGGATGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQALVCR*LGDASM
Trigger: CATGGAGGCATCCCCCAATCACCTGCAGACCAAGGC...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGGCCTTGGTCTGCAGGTaGTTGGGGGATGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKALVCR*LGDASM
Trigger: CATGGAGGCATCCCCCAATCACCTGCAGACCAAGGC...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGAGGATCTGGCGGGTCTaGCTGGAGCCTCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQRIWRV*LEPPLS
Trigger: TGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCT...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGATCGTGCAAAGTGCTTaGGTGCCAGGTGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRIVQSA*VPGAQG
Trigger: TCCTTGGGCACCTGGCACTCAAGCACTTTGCACGAT...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCGACCTTCCAGAGGCCTaGGTGGGGGACTTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQMLVETSCDLPEA*VGDLQG
Trigger: CCCTTGCAAGTCCCCCACTCAGGCCTCTGGAAGGTC...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATAACTTCTTGAGCAGCTaGGCGCGCTTGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDNFLSS*ARLPGA
Trigger: GGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTT...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTCAGGTGATTGGGGGATaGCTCCATGTCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTQVIGG*LHVQAK
Trigger: CTTTGCCTGGACATGGAGGCATCCCCCAATCACCTG...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTCACAAGCCTGGGCATaGAGGGCAGCACGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKSQAWA*RAARGA
Trigger: AGCTCCTCGTGCTGCCCTGCATGCCCAGGCTTGTGA...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCAGCAGGAGCAGCAGCTaGTTTTGCTACGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPSRSSS*FCYGCC
Trigger: GCAACAGCCGTAGCAAAAGCAGCTGCTGCTCCTGCT...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGCAGAGTAGAGGGCCGTaGCAGGCGCCAGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKQSRGP*QAPDWG
Trigger: CCCCCAGTCTGGCGCCTGGCACGGCCCTCTACTCTG...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR CCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGGAAGTGGCGGAAGAGTaGCTTCACCTGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGREVAEE*LHLLAG
Trigger: CCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTC...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGCAGTCCTCAGTGGGCTaGAGAAGGACCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRQSSVG*RRTFSP
Trigger: TGGAGAGAAGGTCCTTCTCCAGCCCACTGAGGACTG...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCCAGTCCTCAGTGGGCTaGAGAAGGACCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPQSSVG*RRTFSP
Trigger: TGGAGAGAAGGTCCTTCTCCAGCCCACTGAGGACTG...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCAAAGACAGCAGGTCCTaGTTCTGCTTGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPKDSRS*FCLQRA
Trigger: GGCCCTCTGCAAGCAGAACCAGGACCTGCTGTCTTT...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGGCGCACATAGGCCTTaGTCTGCAGGTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQGAHRP*SAGDWG
Trigger: CCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCC...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGTCGACCTCTTTCCCGTaGAGCAGGAAGTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRSTSFP*SRKLLH
Trigger: GTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGA...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGCCCACCCCAGCTCTATaGGGAGGACAAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWPTPAL*GGQRES
Trigger: ACTCTCCCTTTGTCCTCCCCATAGAGCTGGGGTGGG...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGGCAGAAGGGGGCCCATaGGACACTGTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRAEGGP*DTVRAR
Trigger: TCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGC...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGAGGGTGGTGGCAGCTaGAGTTCCAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEEGGGS*SSKAVG
Trigger: TCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTC...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATGAGCCAGAAGGGCCAAGACTGGGCCAGTaGGTCCCAGTGTCCGACCCA +
Preference number: 4 (lower is better)
Translates to: KREGQRPCCWCQTHEPEGPRLGQ*VPVSDP
Trigger: TGGGTCGGACACTGGGACCCACTGGCCCAGTCTTGG...CCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGGGGGCTGGGGGTCCCTaGGCAGGCATCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLGAGGP*AGIKAR
Trigger: CCTAGCCTTGATGCCTGCCCAGGGACCCCCAGCCCC...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGGTCCTGCACAGATGCTaGAAGGCGGCTGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLVLHRC*KAAAYG
Trigger: ACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGAC...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCATGCGAAACAAGTTCTTaGATTTCCCTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTACETSS*ISLAAS
Trigger: AGAAGCTGCCAGGGAAATTCAAGAACTTGTTTCGCA...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCAGGATCTGGCGGGTCTaGCTGGAGCCTCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RGVKVIKALPESSGAFTVRIWRV*LEPPLS
Trigger: TGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCT...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGGACTTCAGCAGGATaGACAGACTTATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTGTSAG*TDLWVQ
Trigger: CTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCCC...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGTTGGTGTCAGACACATaGGCCAGAAGGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRLVSDT*ARRGMS
Trigger: TGACATCCCCCTTCTGGCTCATGTGTCTGACACCAA...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGCAGCGGTTTCTGCAATaGCAACCGCGCCTGTACAAT +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRQRFLQ*QPRLYN
Trigger: ATTGTACAGGCGCGGTTGTCATTGCAGAAACCGCTG...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATAAGAGTGGCTTCACCTaGTTGCTGGGTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDKSGFT*LLGGWF
Trigger: GAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTT...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAAGCAGGTCCTGGTTCTaGTTGCAGAGGGCCGCGATC +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQSRSWF*LQRAAI
Trigger: GATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCT...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGAGCTTTTGTGGTTCCTaGAGGGGTCCGTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRSFCGS*RGPSGS
Trigger: AGAACCTGACGGACCCCTGCAGGAACCACAAAAGCT...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATCAGGTGATTGGGGGATaGCTCCATGTCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDQVIGG*LHVQAK
Trigger: CTTTGCCTGGACATGGAGGCATCCCCCAATCACCTG...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATTGCTTGAGTGCCAGGTaGCCAAGGATCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHCLSAR*PRIWRV
Trigger: GACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCA...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTCGTGGAGCAGGAAGTTaGTCCACGGGAAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTRGAGS*STGKMS
Trigger: TGACATCTTTCCCGTGGAGCAACTTCCTGCTCCACG...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTAGCATTCTTTCCTGCTaGAAGAGGAAGTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VLECQVPKDLAGLTGASTSILSC*KRKLEA
Trigger: AGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCT...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAGTAACCCCTCCCACCTaGTGCTACTCCCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLVTPPT*CYSLPQ
Trigger: TTGGGGCAGGGAGTAGCAGCAGGTGGGAGGGGTTAC...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGGCAGGGAGAGGAGAGTaGATCAGCAGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKAGRGE*ISSSRE
Trigger: CTCCCTGCTACTGCTGATGCACTCTCCTCTCCCTGC...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGCCACCCAGCGGTTTCTaGAATGACAACCGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKPPSGF*NDNRAC
Trigger: ACAGGCGCGGTTGTCATTGCAGAAACCGCTGGGTGG...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGTCTATCCGGCGGAAGTaGCGGAAGAGTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLSIRRK*RKSGFT
Trigger: GGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGA...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGCAGTCCTCAGTGGGCTaGAGAAGGACCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRQSSVG*RRTFSP
Trigger: TGGAGAGAAGGTCCTTCTCCAGCCCACTGAGGACTG...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATAGGCAGTTAGGTGGTTaGCAACGTCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDRQLGG*QRPQAP
Trigger: TGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCT...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGGAGTGTGGGGGTaGAGAAAGCACCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECQGVWG*RKHPAP
Trigger: TGGTGCGGGGTGCTTTCTCCACCCCCACACTCCCTG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATCTTGGCTCACAAGCCTaGGCATGCAGGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHLGSQA*ACRAAR
Trigger: TCGTGCTGCCCTGCATGCCCAGGCTTGTGAGCCAAG...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGCCCCAAAAAGCAGCTTaGCTCACAAGCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEPQKAA*LTSLGM
Trigger: CATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGG...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCGCAGAAGGGGGCCCATaGGACACTGTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPAEGGP*DTVRAR
Trigger: TCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGC...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGACCCAGAGGGTGGTaGCAGCTGGAGTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSRPRGW*QLEFQG
Trigger: GCCTTGGAACTCCAGCTGCCACCACCCTCTGGGTCG...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCGTCCGACCCAGAGGGTaGTGGCAGCTGGAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFVRPRG*WQLEFQ
Trigger: TTGGAACTCCAGCTGCCACCACCCTCTGGGTCGGAC...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATCCAAGACTGGGCCAGTaGGTCCCAGTGTCCGACCCA +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDPRLGQ*VPVSDP
Trigger: TGGGTCGGACACTGGGACCCACTGGCCCAGTCTTGG...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCAGCAGCAGCCAAGACTaGGCCAGTGGGTCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLSSSQD*ASGSQC
Trigger: ACACTGGGACCCACTGGCCCAGTCTTGGCTGCTGCT...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGCCCCGCGGGCTCCTCTaGATATTGAAGTTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQPRGLL*ILKFLR
Trigger: ACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGG...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATCGTTGTCCAGCCCCATaGCCACGGCGTAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHRCPAP*PRRRKT
Trigger: TGTCTTTCTACGCCGTGGTCATGGGGCTGGACAACG...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGGAAAGTCAGGTCTTTaGGGATCAGAGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDGKSGL*GSEARR
Trigger: CCTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGGTTCTGGTTGTCGATaGCCTGAAACTGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDGSGCR*PETGAH
Trigger: ATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGAGCCTCCACTCTCACTaGCTGTTTGCCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLSLHSH*LFASSL
Trigger: CAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCT...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTAGGATCTGGCGGGTCTaGCTGGAGCCTCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSRIWRV*LEPPLS
Trigger: TGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGATCGTGCAAAGTGCTTaGGTGCCAGGTGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQIVQSA*VPGAQG
Trigger: TCCTTGGGCACCTGGCACTCAAGCACTTTGCACGAT...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGACAACCCTAGCTCCTaGTACTGCTCTACCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQDNPSS*YCSTRA
Trigger: GGCTCGGGTAGAGCAGTATCAGGAGCTAGGGTTGTC...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTATGGCTAGACAGGCTTaGTTCCGGCCCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPMARQA*FRPSPS
Trigger: TGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCAT...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATGTCTCCACCAGCTGGTaGAGCCTCAGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHVSTSW*SLRVSS
Trigger: AGAGGACACTCTGAGGCTGCACCAGCTGGTGGAGAC...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCAGCAGGTCCTGGTTCTaGTTGCAGAGGGCCGCGATC +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECSRSWF*LQRAAI
Trigger: GATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCT...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGAAGCAGGTCCTGGTTCTaGTTGCAGAGGGCCGCGATC +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRSRSWF*LQRAAI
Trigger: GATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCT...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGAGACATCGTGCAAAGTaGTTGAGTGCCAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWERHRAK*LSARCP
Trigger: TGGGCACCTGGCACTCAAGCACTTTGCACGATGTCT...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCCCTGCTGCTACTCCCTaGCCCAAAAAGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPPAATP*PKKQLG
Trigger: GCCAAGCTGCTTTTTGGGGCAGGGAGTAGCAGCAGG...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCACCCCTCCCACCTGCTaGTACTCCCTGCCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQMLVETSCTPPTC*YSLPQK
Trigger: TTTTTGGGGCAGGGAGTAGCAGCAGGTGGGAGGGGT...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGAGTAACCCCTCCCACCTaGTGCTACTCCCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRVTPPT*CYSLPQ
Trigger: TTGGGGCAGGGAGTAGCAGCAGGTGGGAGGGGTTAC...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATAGAAGGGTGAGTCTGTaGCAGGAAACCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDRRVSL*QETSPS
Trigger: ACTGGGTGAGGTTTCCTGGCACAGACTCACCCTTCT...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCGCAGGGAGAGGAGAGTaGATCAGCAGTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPAGRGE*ISSSRE
Trigger: CTCCCTGCTACTGCTGATGCACTCTCCTCTCCCTGC...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGAAGTGGCGGAAGAGTaGCTTCACCTGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQEVAEE*LHLLAG
Trigger: CCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTC...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTCTATCCGGCGGAAGTaGCGGAAGAGTGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLSIRRK*RKSGFT
Trigger: GGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGA...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGAGGCGCACATAGGCCTTaGTCTGCAGGTGATTGGGGG +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRGAHRP*SAGDWG
Trigger: CCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCC...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCCCCACCCCAGCTCTATaGGGAGGACAAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQMLVETSCPTPAL*GGQRES
Trigger: ACTCTCCCTTTGTCCTCCCCATAGAGCTGGGGTGGG...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAACAGGGCAAGAGGGCATaGGACACAGCACCTCCTATG +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQQGKRA*DTAPPM
Trigger: CATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTG...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTGTCCTGCACAGATGCTaGAAGGCGGCTGCGTATGGT +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSVLHRC*KAAAYG
Trigger: ACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGAC...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTCCCCGCGGGCTCCTCTaGATATTGAAGTTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPPRGLL*ILKFLR
Trigger: ACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGG...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCCCCCGCGGGCTCCTCTaGATATTGAAGTTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFPRGLL*ILKFLR
Trigger: ACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGG...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGTTGTCCAGCCCCATaGCCACGGCGTAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSRCPAP*PRRRKT
Trigger: TGTCTTTCTACGCCGTGGTCATGGGGCTGGACAACG...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGCACTTTTTCGGCCACTaGATGCAGCTTCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRHFFGH*MQLLDV
Trigger: AACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTG...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTCACTTTTTCGGCCACTaGATGCAGCTTCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTHFFGH*MQLLDV
Trigger: AACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTG...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTAGCCTCCACTCTCACTaGCTGTTTGCCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPSLHSH*LFASSL
Trigger: CAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCT...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAAGCCTCCACTCTCACTaGCTGTTTGCCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRSLHSH*LFASSL
Trigger: CAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCT...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCATCGTGCAAAGTGCTTaGGTGCCAGGTGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQMLVETSCIVQSA*VPGAQG
Trigger: TCCTTGGGCACCTGGCACTCAAGCACTTTGCACGAT...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGGGGACTTCAGCAGGATaGACAGACTTATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRGTSAG*TDLWVQ
Trigger: CTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCCC...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGGGTCCTCTAGGCAGCTaGGGCCTGTGTTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVGPLGS*GLCFPE
Trigger: CTCAGGGAAACACAGGCCTCAGCTGCCTAGAGGACC...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGTTGGTGTCAGACACATaGGCCAGAAGGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRLVSDT*ARRGMS
Trigger: TGACATCCCCCTTCTGGCTCATGTGTCTGACACCAA...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGTGCCAGAAAGAAGGGTaGGTCTGTGCCAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRCQKEG*VCARKP
Trigger: AGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCA...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCGCCCTCCATGCCTCCTaGCCGAACAAAGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECALHAS*PNKVLV
Trigger: CACCAGTACTTTGTTCGGGCAGGAGGCATGGAGGGC...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCGTCTCCACCAGCTGGTaGAGCCTCAGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECVSTSW*SLRVSS
Trigger: AGAGGACACTCTGAGGCTGCACCAGCTGGTGGAGAC...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAAGGCCACCCGGGTCTaGAGACAGGAGTCTATCCGG +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKKATRV*RQESIR
Trigger: CCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCATGCTGAAAGGCGGCTaGGTATGGTCACATAAGAGT +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPMLKGG*VWSHKS
Trigger: ACTCTTATGTGACCATACGCAGCCGCCTTTCAGCAT...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTGATGCTGAAAGGCGGCTaGGTATGGTCACATAAGAGT +
Preference number: 4 (lower is better)
Translates to: HNIPGGPSPDQEEAGQVVMLKGG*VWSHKS
Trigger: ACTCTTATGTGACCATACGCAGCCGCCTTTCAGCAT...CACCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGTGCTTGAGTGCCAGGTaGCCAAGGATCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLCLSAR*PRIWRV
Trigger: GACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCA...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGATTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRLVETS*KVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAA...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCGGTGGAGAAGAAGGCTaGCAATCCCTCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFGGEEG*QSLPQS
Trigger: GGATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACC...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGTGGAGAAGAAGGCTaGCAATCCCTCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEEGGEEG*QSLPQS
Trigger: GGATTGTGGGAGGGATTGGCAGCCTTCTTCTCCACC...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAAGCAGGAGCAGCAGCTaGTTTTGCTACGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEESRSSS*FCYGCC
Trigger: GCAACAGCCGTAGCAAAAGCAGCTGCTGCTCCTGCT...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGGCCAGAGGAAAGGAGTaGTCGCTCTCAGCAACCCCC +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVARGKE*SLSATP
Trigger: GGGGGTTGCTGAGAGCGAGCACTCCTTTCCTCTGGC...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAGTAGCCGGGGGAGGTaGCAGAGGAAAGGAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKSSRGR*QRKGVL
Trigger: GAGCACTCCTTTCCTCTGGCACCTCCCCCGGCTACT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGGCGGCGAAGACACGATaGTCAGAGCTGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKAAKTR*SELEEQ
Trigger: CTGCTCCTCCAGCTCTGAGCATCGTGTCTTCGCCGC...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATGCCAGCTGCGACGTCTaGTTCTTCAGAAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDASCDV*FFRNFS
Trigger: GGAGAAATTTCTGAAGAAGCAGACGTCGCAGCTGGC...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR CCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCAGATCCTTGATGATGTaGCCGGCCCCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFRSLMM*PAPSSS
Trigger: AGAGGAAGAGGGGGCCGGCCACATCATCAAGGATCT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGACCGTCTCCACCAGCTaGTGCAGCCTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKTVSTS*CSLRVS
Trigger: GGACACTCTGAGGCTGCACCAGCTGGTGGAGACGGT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTACCGTCTCCACCAGCTaGTGCAGCCTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VAPRERCQMLVETSCKVLTVSTS*CSLRVS
Trigger: GGACACTCTGAGGCTGCACCAGCTGGTGGAGACGGT...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATCAGGCTCCACTCGGTaGATCTCTGTGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRSGSTR*ISVSPG
Trigger: CCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGA...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCAGGCAGTTAGGTGGTTaGCAACGTCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLRQLGG*QRPQAP
Trigger: TGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCT...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAAGGCAGTTAGGTGGTTaGCAACGTCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEERQLGG*QRPQAP
Trigger: TGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCT...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAATGGAAGGCAGTTAGGTaGTTGGCAACGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQWKAVR*LATSSG
Trigger: GCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCA...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAAGACAGCAGGTCCTaGTTCTGCTTGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPKDSRS*FCLQRA
Trigger: GGCCCTCTGCAAGCAGAACCAGGACCTGCTGTCTTT...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATTGGTCTGCAGGTGATTaGGGGATGCCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHWSAGD*GMPPCP
Trigger: TGGACATGGAGGCATCCCCCAATCACCTGCAGACCA...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCGACCTCTTTCCCGTaGAGCAGGAAGTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLSTSFP*SRKLLH
Trigger: GTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGA...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTGGCTTGAAGGAGCAATaGGGAGGGGACTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSGLKEQ*GGDFSR
Trigger: CCTGCTGAAGTCCCCTCCCCATTGCTCCTTCAAGCC...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCCAAAAAGCAGGAGTGTGGGCAGCAGACAACCCTAGCTCCTGATACTGCTCTAAAGCTGGACAGGTGGTaGAGAAGAAGGCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: PKKQECGQQTTLAPDTALKLDRW*RRRLPI
Trigger: GATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTT...TAGAGCAGTATCAGGAGCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGAAGAAGCTGGACAGGTaGTGGAGAAGAAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQKKLDR*WRRRLP
Trigger: TGGCAGCCTTCTTCTCCACCACCTGTCCAGCTTCTT...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCCCCCAAAAAGCAGCTTaGCTCACAAGCCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFPQKAA*LTSLGM
Trigger: CATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGG...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCATCAGAGCCCATCCCTaGACCTTCCAGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECIRAHP*TFQRPE
Trigger: CTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGAT...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGACAGGGCAAGAGGGCATaGGACACAGCACCTCCTATG +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRQGKRA*DTAPPM
Trigger: CATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTG...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: RGVKVIKALPESSGAFTVRPTDC*TQECAP
Trigger: AGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCT...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS-3UTR TCA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEERPTDC*TQECAP
Trigger: AGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCT...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5
CDS-3UTR TCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGGAAAGTCAGGTCTTTaGGGATCAGAGGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPGKSGL*GSEARR
Trigger: CCTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCGGTTCTGGTTGTCGATaGCCTGAAACTGGCGCACAT +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFGSGCR*PETGAH
Trigger: ATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACC...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGGGACTTCAGCAGGATaGACAGACTTATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPGTSAG*TDLWVQ
Trigger: CTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCCC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGTGTAGTTTTGGCTTaGAGGAGCAATGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHSVVLA*RSNGEG
Trigger: CCCCTCCCCATTGCTCCTTCAAGCCAAAACTACACT...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAGGCCTGTGTTTCCCTaGGCATCTTTTACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRRPVFP*ASFTLS
Trigger: TGAGAGGGTAAAAGATGCTCAGGGAAACACAGGCCT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGATGGCTAGACAGGCTTaGTTCCGGCCCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKMARQA*FRPSPS
Trigger: TGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCAT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGATGGCTAGACAGGCTTaGTTCCGGCCCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLMARQA*FRPSPS
Trigger: TGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCAT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGGTCTCCACCAGCTGGTaGAGCCTCAGAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLVSTSW*SLRVSS
Trigger: AGAGGACACTCTGAGGCTGCACCAGCTGGTGGAGAC...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGCTTTTGTGGTTCCTaGAGGGGTCCGTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHSFCGS*RGPSGS
Trigger: AGAACCTGACGGACCCCTGCAGGAACCACAAAAGCT...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGGTCTTACTCCCTTCGTaGAGGAAAGTCAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRVLLPS*RKVRSL
Trigger: CAAAGACCTGACTTTCCTGCACGAAGGGAGTAAGAC...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGGCCGGCTCCGGTATTTaGGGATTGTCCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKAGSGI*GLSSLF
Trigger: AAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGC...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCAGACATCGTGCAAAGTaGTTGAGTGCCAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFRHRAK*LSARCP
Trigger: TGGGCACCTGGCACTCAAGCACTTTGCACGATGTCT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCCGTGGAGCAGGAAGTTaGTCCACGGGAAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: RGVKVIKALPESSGAFTVRGAGS*STGKMS
Trigger: TGACATCTTTCCCGTGGAGCAACTTCCTGCTCCACG...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCCGTGGAGCAGGAAGTTaGTCCACGGGAAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQMLVETSCRGAGS*STGKMS
Trigger: TGACATCTTTCCCGTGGAGCAACTTCCTGCTCCACG...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGAGCATTCTTTCCTGCTaGAAGAGGAAGTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRSILSC*KRKLEA
Trigger: AGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCT...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTACCCCTCCCACCTGCTaGTACTCCCTGCCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: VAPRERCQMLVETSCKVLTPPTC*YSLPQK
Trigger: TTTTTGGGGCAGGGAGTAGCAGCAGGTGGGAGGGGT...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGCCCGAACAAAGTACTaGTGTAGCTCCTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEARTKY*CSSCRN
Trigger: ATTTCTGCAGGAGCTACACCAGTACTTTGTTCGGGC...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGTGCTTGCTGGGTGGCTaGTTCTCCTCTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQCLLGG*FSSGIF
Trigger: AAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCA...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTGCTTGCTGGGTGGCTaGTTCTCCTCTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKCLLGG*FSSGIF
Trigger: AAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCA...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGACACCTGCTTGCTGGGTaGCTGGTTCTCCTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRHLLAG*LVLLWN
Trigger: ATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTG...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAAGGCGGCTGCGTATaGTCACATAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRKGGCV*SHKSGQ
Trigger: CTGACCACTCTTATGTGACCATACGCAGCCGCCTTT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGCAGGGGGCTTCATTTTaGAGATCACTTCTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQQGASF*RSLLGS
Trigger: GCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTG...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGCAGGGGGCTTCATTTTaGAGATCACTTCTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRQGASF*RSLLGS
Trigger: GCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTG...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCTGGTCTGCAGGTGATTaGGGGATGCCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECWSAGD*GMPPCP
Trigger: TGGACATGGAGGCATCCCCCAATCACCTGCAGACCA...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGCAGAACAGATCTCGATaGGAGGACATAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWQNRSR*EDIEEG
Trigger: TCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTG...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AAGAGAGAGGGACAGAGACCATGTTGTTGGTGTCAGACACATGAGCCAGAAGGGGCTGCAAGAGGAAGTTaGAAGCTCCATCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KREGQRPCCWCQTHEPEGAARGS*KLHPQN
Trigger: GTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGC...CCCTTCTGGCTCATGTGTCTGACACCAACAACATGGTCTCTGTCCCTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGCTGCAAGAGGAAGTTaGAAGCTCCATCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQAARGS*KLHPQN
Trigger: GTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGC...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGCTGCAAGAGGAAGTTaGAAGCTCCATCCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPAARGS*KLHPQN
Trigger: GTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAAAGAAGCTGGACAGGTaGTGGAGAAGAAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLKKLDR*WRRRLP
Trigger: TGGCAGCCTTCTTCTCCACCACCTGTCCAGCTTCTT...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGACAAAAAGCAGGAGTGTaGGCAGCAGACAACCCTAGC +
Preference number: 4 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRQKAGV*AADNPS
Trigger: GCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTG...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCCAAAAAGCAGGAGTGTaGGCAGCAGACAACCCTAGC +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPQKAGV*AADNPS
Trigger: GCTAGGGTTGTCTGCTGCCCACACTCCTGCTTTTTG...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCTTGCCAGAGTCCAGTaGCGCCTTTACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECLARVQ*RLYSLC
Trigger: GCAGAGACTGTAAAGGCGCCACTGGACTCTGGCAAG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGGAGGGTGGTGGCAGCTaGAGTTCCAAGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKEGGGS*SSKAVG
Trigger: TCCAACAGCCTTGGAACTCCAGCTGCCACCACCCTC...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTAGTGTAGTTTTGGCTTaGAGGAGCAATGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSSVVLA*RSNGEG
Trigger: CCCCTCCCCATTGCTCCTTCAAGCCAAAACTACACT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCAGGCCTGTGTTTCCCTaGGCATCTTTTACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFRPVFP*ASFTLS
Trigger: TGAGAGGGTAAAAGATGCTCAGGGAAACACAGGCCT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAAGAGTGGCTTCACCTaGTTGCTGGGTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKKSGFT*LLGGWF
Trigger: GAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAAGAGTGGCTTCACCTaGTTGCTGGGTGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLKSGFT*LLGGWF
Trigger: GAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCGCCGGCTCCGGTATTTaGGGATTGTCCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLAGSGI*GLSSLF
Trigger: AAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGC...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGCAGGTGATTGGGGGATaGCTCCATGTCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKQVIGG*LHVQAK
Trigger: CTTTGCCTGGACATGGAGGCATCCCCCAATCACCTG...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCCTCTCACTGACTGTTTaGCTCCAGCTTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPLSLTV*LQLVGE
Trigger: CTCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAG...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTACCAGATGCACTCCTaGTCCCTAAAAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDYQMHS*SLKEDT
Trigger: TGTGTCTTCTTTTAGGGAGCAGGAGTGCATCTGGTA...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATAGAAGGGTGAGTCTGTaGCAGGAAACCTCACCCAGT +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDRRVSL*QETSPS
Trigger: ACTGGGTGAGGTTTCCTGGCACAGACTCACCCTTCT...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTTTTTGCTACGGCTGTTaGTGTCTCTTCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTFCYGC*CLFKRE
Trigger: TTCCCTTTTGAAGAGACAGCAACAGCCGTAGCAAAA...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGAGAAATGGAGAAGCATaGCTAGACAGGCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLRNGEA*LDRLAS
Trigger: GGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCT...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCTGCTTGCTGGGTGGCTaGTTCTCCTCTGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RCQMLVETSCKVLECQVPCLLGG*FSSGIF
Trigger: AAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCA...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAAAAGGCGGCTGCGTATaGTCACATAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLKGGCV*SHKSGQ
Trigger: CTGACCACTCTTATGTGACCATACGCAGCCGCCTTT...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAAACACAGTCCTCAGTaGGCTGGAGAAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHKHSPQ*AGEGPS
Trigger: AGAAGGTCCTTCTCCAGCCCACTGAGGACTGTGTTT...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAAAACACAGTCCTCAGTaGGCTGGAGAAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQKHSPQ*AGEGPS
Trigger: AGAAGGTCCTTCTCCAGCCCACTGAGGACTGTGTTT...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTTGGAAGGCAGTTAGGTaGTTGGCAACGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VAPRERCQMLVETSCKVLWKAVR*LATSSG
Trigger: GCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCA...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAAAGACAGCAGGTCCTaGTTCTGCTTGCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLKDSRS*FCLQRA
Trigger: GGCCCTCTGCAAGCAGAACCAGGACCTGCTGTCTTT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCCAGGGGGCTTCATTTTaGAGATCACTTCTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLQGASF*RSLLGS
Trigger: GCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTG...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGCAGAACAGATCTCGATaGGAGGACATAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQQNRSR*EDIEEG
Trigger: TCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTG...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGAAAGCTGGACAGGTGGTaGAGAAGAAGGCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRKLDRW*RRRLPI
Trigger: GATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTT...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTCCAGCAGGATATCAATaGGGAAGGATTCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPPAGYQ*GRIPGS
Trigger: TGAGCCAGGAATCCTTCCCCATTGATATCCTGCTGG...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544503.5
3UTR CAA 72 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCW*RHRAKCLSARC
Trigger: GCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
3UTR CAA 72 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTaGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EQEVAPRERCQM*VETSCKVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAGGCTCCTCTGAATATTaGAGTTTCTCCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRGSSEY*SFSVTE
Trigger: CTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCC...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGATGTCAGATGTTGGTTaGGACATCGTGCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKMSDVG*DIVQSA
Trigger: AGCACTTTGCACGATGTCTCAACCAACATCTGACAT...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGATGTCAGATGTTGGTTaGGACATCGTGCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQMSDVG*DIVQSA
Trigger: AGCACTTTGCACGATGTCTCAACCAACATCTGACAT...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATTGCAAGACAGAAGGGTaGGCAGCATTCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDCKTEG*AAFFPA
Trigger: AGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCA...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGCTGAACCCAAGAGTGTaGACCTTTCTCATACTCACA +
Preference number: 4 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRLNPRV*TFLILT
Trigger: TGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAG...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5
CDS-3UTR GCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATACTGGTGTAGCTCCTaGAGAAATTTCTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRYWCSS*RNFSVG
Trigger: CCCGACGGAGAAATTTCTGCAGGAGCTACACCAGTA...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTTACTGGTGTAGCTCCTaGAGAAATTTCTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSYWCSS*RNFSVG
Trigger: CCCGACGGAGAAATTTCTGCAGGAGCTACACCAGTA...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTAGCTTTTGTGGTTCCTaGAGGGGTCCGTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VAPRERCQMLVETSCKVLSFCGS*RGPSGS
Trigger: AGAACCTGACGGACCCCTGCAGGAACCACAAAAGCT...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCGTCTTACTCCCTTCGTaGAGGAAAGTCAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFVLLPS*RKVRSL
Trigger: CAAAGACCTGACTTTCCTGCACGAAGGGAGTAAGAC...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCTCTCACTGACTGTTTaGCTCCAGCTTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECLSLTV*LQLVGE
Trigger: CTCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGTGCAAAGTGCTTGAGTaGCAGGTGCCCAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVCKVLE*QVPKDL
Trigger: CAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCA...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGTTTTGCTACGGCTGTTaGTGTCTCTTCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRFCYGC*CLFKRE
Trigger: TTCCCTTTTGAAGAGACAGCAACAGCCGTAGCAAAA...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCATAGAGGATTTTTGCTaGAGGAACAAGACAGATCAC +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPIEDFC*RNKTDH
Trigger: GTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTAT...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCTCCATAGAGGATTTTTaGTGCAGGAACAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GKEVVPERRVSLCQETSPSIEDF*CRNKTD
Trigger: ATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGA...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAGCCCGAACAAAGTACTaGTGTAGCTCCTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRARTKY*CSSCRN
Trigger: ATTTCTGCAGGAGCTACACCAGTACTTTGTTCGGGC...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAAGCTGGACAGGTGGTaGAGAAGAAGGCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKKLDRW*RRRLPI
Trigger: GATTGGCAGCCTTCTTCTCCACCACCTGTCCAGCTT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCCAGAGACCATGTTGTTaGTGTCAGACACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLQRPCC*CQTHEP
Trigger: TGGCTCATGTGTCTGACACCAACAACATGGTCTCTG...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTGGCTCCTCTGAATATTaGAGTTTCTCCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSGSSEY*SFSVTE
Trigger: CTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCC...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAATGCGAAACAAGTTCTTaGATTTCCCTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEECETSS*ISLAAS
Trigger: AGAAGCTGCCAGGGAAATTCAAGAACTTGTTTCGCA...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATGCGAAACAAGTTCTTaGATTTCCCTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APSPEQISMGGHRGRSFLCETSS*ISLAAS
Trigger: AGAAGCTGCCAGGGAAATTCAAGAACTTGTTTCGCA...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCAAGACAGAAGGGTaGGCAGCATTCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKCKTEG*AAFFPA
Trigger: AGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCA...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGTACAATGTTCACATATaGTACAAGGCTCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWYNVHI*YKALSL
Trigger: GAGGGAAAGAGCCTTGTATCATATGTGAACATTGTA...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATATGCTGAAAGGCGGCTaGGTATGGTCACATAAGAGT +
Preference number: 4 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDMLKGG*VWSHKS
Trigger: ACTCTTATGTGACCATACGCAGCCGCCTTTCAGCAT...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGGCCGGCTCCGGTATTTaGGGATTGTCCTCACTTTTT +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVAGSGI*GLSSLF
Trigger: AAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGC...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCAGCATTCTTTCCTGCTaGAAGAGGAAGTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFSILSC*KRKLEA
Trigger: AGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGTCCATAGAGGATTTTTaGTGCAGGAACAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWESIEDF*CRNKTD
Trigger: ATCTGTCTTGTTCCTGCAGCAAAAATCCTCTATGGA...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGAAAGGCGGCTGCGTATaGTCACATAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVKGGCV*SHKSGQ
Trigger: CTGACCACTCTTATGTGACCATACGCAGCCGCCTTT...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAAACACAGTCCTCAGTaGGCTGGAGAAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLKHSPQ*AGEGPS
Trigger: AGAAGGTCCTTCTCCAGCCCACTGAGGACTGTGTTT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGAAAGATGTCAGATGTTaGTTGAGACATCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PAARGSWKLHPQNRSRWEKDVRC*LRHRAK
Trigger: CTTTGCACGATGTCTCAACCAACATCTGACATCTTT...CTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGAACAGATCTCGATaGGAGGACATAGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECQNRSR*EDIEEG
Trigger: TCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGAGACCATGTTGTTaGTGTCAGACACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECQRPCC*CQTHEP
Trigger: TGGCTCATGTGTCTGACACCAACAACATGGTCTCTG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGGGCTCCTCTGAATATTaGAGTTTCTCCGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLGSSEY*SFSVTE
Trigger: CTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCC...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTATGTCAGATGTTGGTTaGGACATCGTGCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSMSDVG*DIVQSA
Trigger: AGCACTTTGCACGATGTCTCAACCAACATCTGACAT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR TCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTACAATGTTCACATATaGTACAAGGCTCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKYNVHI*YKALSL
Trigger: GAGGGAAAGAGCCTTGTATCATATGTGAACATTGTA...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCTGAACCCAAGAGTGTaGACCTTTCTCATACTCACA +
Preference number: 4 (lower is better)
Translates to: PRERCQMLVETSCKVLECLNPRV*TFLILT
Trigger: TGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAG...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5
CDS-3UTR GCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGTTGGTTGAGACATCGTaGAAAGTGCTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVLVETS*KVLECQ
Trigger: CTGGCACTCAAGCACTTTGCACGATGTCTCAACCAA...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATACCAGATGCACTCCTaGTCCCTAAAAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRYQMHS*SLKEDT
Trigger: TGTGTCTTCTTTTAGGGAGCAGGAGTGCATCTGGTA...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGGCCCGAACAAAGTACTaGTGTAGCTCCTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVARTKY*CSSCRN
Trigger: ATTTCTGCAGGAGCTACACCAGTACTTTGTTCGGGC...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp GAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGAGAAATGGAGAAGCATaGCTAGACAGGCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EVAPRERCQMLVETSCKVRNGEA*LDRLAS
Trigger: GGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCT...CACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CCA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGAAAGATGTCAGATGTTaGTTGAGACATCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKKDVRC*LRHRAK
Trigger: CTTTGCACGATGTCTCAACCAACATCTGACATCTTT...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR GCA 90 bp AAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCATAGAGGATTTTTGCTaGAGGAACAAGACAGATCAC +
Preference number: 4 (lower is better)
Translates to: KLHPQNRSRWEDIEEGAFIEDFC*RNKTDH
Trigger: GTGATCTGTCTTGTTCCTGCAGCAAAAATCCTCTAT...GAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAAATCAGAGCCCATCCCTaGACCTTCCAGAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQIRAHP*TFQRPE
Trigger: CTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGAT...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGCCTGTACAATACACATaGTTCACTCTGTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLPVQYT*FTLLKL
Trigger: CAGCTTTAACAGAGTGAACCATGTGTATTGTACAGG...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAATGGAAGGCAGTTAGGTaGTTGGCAACGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQWKAVR*LATSSG
Trigger: GCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCA...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAAAGCAGCAGCTGCTTTTaGTACGGCTGTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQSSSCF*YGCCCL
Trigger: GAGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCT...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAATGCAAGACAGAAGGGTaGGCAGCATTCTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQCKTEG*AAFFPA
Trigger: AGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCA...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR GCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAATACTGGTGTAGCTCCTaGAGAAATTTCTCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQYWCSS*RNFSVG
Trigger: CCCGACGGAGAAATTTCTGCAGGAGCTACACCAGTA...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR TCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAACACTTTTTCGGCCACTaGATGCAGCTTCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQHFFGH*MQLLDV
Trigger: AACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTG...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CCA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAACCTGTACAATACACATaGTTCACTCTGTTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQPVQYT*FTLLKL
Trigger: CAGCTTTAACAGAGTGAACCATGTGTATTGTACAGG...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS GCA 90 bp CCCATGCCGGCTGCAGCCGGCACGCGGCCCGAAGAGTGGGCAGGCTaGGGGGCCGGTGCGCCCGGCTCTGCGCTGCGGCGGCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PMPAAAGTRPEEWAG*GAGAPGSALRRQRQ
Trigger: CTGCCTCTGCCGCCGCAGCGCAGAGCCGGGCGCACCGGCCCCGCAGCCTGCCCACTCTTCGGGCCGCGTGCCGGCTGCAGCCGGCATGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS GCA 90 bp TTCTGCTTGCAGAGGGCCGCGATCTTGATGAACTTCTTGAGCAGCTaGGCGCGCTTGCCCGGGGCCTCGCAGAGCAGCACTTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FCLQRAAILMNFLSS*ARLPGASQSSTSVA
Trigger: GGCCACCGAAGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 90 bp CGGAAGGCCACCCGGGTCTGCAGACAGGAGTCTATCCGGCGGAAGTaGCGGAAGAGTGGCTTCACCTGCTTGCTGGGTGGCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RKATRVCRQESIRRK*RKSGFTCLLGGWFS
Trigger: GGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 90 bp ACACGGCAGAAGATCTCATCAGAGCCCCGGAAGGCCACCCGGGTCTaGAGACAGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: TRQKISSEPRKATRV*RQESIRRKWRKSGF
Trigger: GAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTTCCGGGGCTCTGATGAGATCTTCTGCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTAGGTCCTGGTTCTGCTaGCAGAGGGCCGCGATCTTG +
Preference number: 5 (lower is better)
Translates to: VLECQVPKDLAGLTGASTRSWFC*QRAAIL
Trigger: CAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCT...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GGGAAAGAGGTGGTGCCAGAAAGAAGGGTGAGTCTGTGCCAGGAAACCTCACCCCGGCTGACAGCGGCGTaGTCCAGCCCCATGACCACG +
Preference number: 5 (lower is better)
Translates to: GKEVVPERRVSLCQETSPRLTAA*SSPMTT
Trigger: CGTGGTCATGGGGCTGGACAACGCCGCTGTCAGCCG...GGGTGAGGTTTCCTGGCACAGACTCACCCTTCTTTCTGGCACCACCTCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS CCA 90 bp TGGAAGGCAGTTAGGTGGTTGGCAACGTCCTCAGGCTCCACTCGGTaGATCTCTGTGTCTCCAGGGGAGACCTGGATCTCCTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: WKAVRWLATSSGSTR*ISVSPGETWISSGR
Trigger: CCTCCCCGAGGAGATCCAGGTCTCCCCTGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 90 bp GTGGCTTCACCTGCTTGCTGGGTGGCTGGTTCTCCTCTGGAATCCTaGCATGGACACAGCTGGGCATCAGCACGCCCTGCCAGGCATATG +
Preference number: 5 (lower is better)
Translates to: VASPACWVAGSPLES*HGHSWASARPARHM
Trigger: CATATGCCTGGCAGGGCGTGCTGATGCCCAGCTGTGTCCATGCCAGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CCA 90 bp CCGGGTCTGCAGACAGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTaGCTTCACCTGCTTGCTGGGTGGCTGGTTCTCCTCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: PGLQTGVYPAEVAEE*LHLLAGWLVLLWNP
Trigger: AGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS-3UTR CAA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCGCAAACAGGTGGCTGTaGATGCCCAGTGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSANRWL*MPSAVK
Trigger: TTTCACCGCACTGGGCATCAACAGCCACCTGTTTGC...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAGCAGCAGCTCCAAGTaGGCCGTCTCCCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRSSSSK*AVSRRP
Trigger: CGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGCT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGCGGCTGACAGCGGCGTaGTCCAGCCCCATGACCACG +
Preference number: 5 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRRLTAA*SSPMTT
Trigger: CGTGGTCATGGGGCTGGACAACGCCGCTGTCAGCCG...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAAGGTAATAAAGGCCTaGCCAGAGTCCAGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSKVIKA*PESSGA
Trigger: GGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTT...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS CCA 90 bp CCTCTTGAAGCAGCCCCTGGTAGGTGTCCAAGAAATGGAGAAGCATaGCTAGACAGGCTTGCTTCCGGCCCAGCCCTTCAGGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PLEAAPGRCPRNGEA*LDRLASGPALQGPP
Trigger: TGGAGGGCCCTGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCTTGGACACCTACCAGGGGCTGCTTCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 90 bp CCGGGTCTGCAGACAGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTaGCTTCACCTGCTTGCTGGGTGGCTGGTTCTCCTCTGGAATCTT +
Preference number: 5 (lower is better)
Translates to: PGLQTGVYPAEVAEE*LHLLAGWLVLLWNL
Trigger: AAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 90 bp GGGCTCCTCTCCAGGTGGGTACTCAGGGCTGAGTCGAGAGGGAGCTaGAAGTCAGAAGCAGGGCATAGGAGAAGGGAAGCATGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: GLLSRWVLRAESRGS*KSEAGHRRREAWVE
Trigger: TTCCACCCATGCTTCCCTTCTCCTATGCCCTGCTTCTGACTTCCAGCTCCCTCTCGACTCAGCCCTGAGTACCCACCTGGAGAGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS-3UTR CAA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGGGCCCCCTCTTCCTCTaGAAGCAGCCCCTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRGPLFL*KQPLVG
Trigger: ACCTACCAGGGGCTGCTTCAAGAGGAAGAGGGGGCC...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCAGCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGAAGCAGCAGCTCCAAGTaGGCCGTCTCCCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AAFFPAARGSWKLHPQNRSSSSK*AVSRRP
Trigger: CGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGCT...TCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCAGGCCGGCTCCGGTATTaGCGGATTGTCCTCACTTTT +
Preference number: 5 (lower is better)
Translates to: SRRGPMGHCQGKRAWDTAGRLRY*RIVLTF
Trigger: AAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCC...TGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TACCCTCTCATCAGAGCCCATCCCTGGACCTTCCAGAGGCCTGAGTGGGGGACTGGAGTTCCAAGGCTGTaGGAAGGGGTCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: YPLIRAHPWTFQRPEWGTGVPRL*EGVRRK
Trigger: CTTCCTCCTGACCCCTTCCAACAGCCTTGGAACTCC...AGTCCCCCACTCAGGCCTCTGGAAGGTCCAGGGATGGGCTCTGATGAGAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS GCA 90 bp TTGCCCAAGGGCTTGCTGCAAGTGAGCCTTGGAACCAGGACGTTGTaGTGCGAACACCGTCTCCCAATGGCACATTTCTCCCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LPKGLLQVSLGTRTL*CEHRLPMAHFSLQP
Trigger: GGGCTGGAGGGAGAAATGTGCCATTGGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCCCTTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CCA 90 bp AGGTTACGGCCATGCGTTGCCCAAGGGCTTGCTGCAAGTGAGCCTTaGAACCAGGACGTTGTGCTGCGAACACCGTCTCCCAATGGCACA +
Preference number: 5 (lower is better)
Translates to: RLRPCVAQGLAASEP*NQDVVLRTPSPNGT
Trigger: TGTGCCATTGGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCCCTTGGGCAACGCATGGCCGTAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CCA 90 bp TTCACCTGCTTGCTGGGTGGCTGGTTCTCCTCTGGAATCCTGGCATaGACACAGCTGGGCATCAGCACGCCCTGCCAGGCATATGGACAA +
Preference number: 5 (lower is better)
Translates to: FTCLLGGWFSSGILA*TQLGISTPCQAYGQ
Trigger: TTGTCCATATGCCTGGCAGGGCGTGCTGATGCCCAGCTGTGTCCATGCCAGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS-3UTR CAA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTAGCAGCAGCTCCAAGTaGGCCGTCTCCCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSSSSSK*AVSRRP
Trigger: CGGCCGCCGGGAGACGGCCAACTTGGAGCTGCTGCT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTCGGCTGACAGCGGCGTaGTCCAGCCCCATGACCACG +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPRLTAA*SSPMTT
Trigger: CGTGGTCATGGGGCTGGACAACGCCGCTGTCAGCCG...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACTCTCACTGACTGTTaGCCTCCAGCTTGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSTLTDC*PPACRR
Trigger: TCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAGT...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTGCACCCCTCAGGCCTaGAGGCTGGTGATGGGAGAG +
Preference number: 5 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDCTPQA*RLVMGE
Trigger: CTCTCCCATCACCAGCCTCAAGGCCTGAGGGGTGCA...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS TCA 90 bp CGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTaGCTGGAGCCTCCACTCTCACTGACTGTTTGCCTCCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: RAKCLSARCPRIWRV*LEPPLSLTVCLQLV
Trigger: TACAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS TCA 90 bp GGAACAAAGGTTACGGCCATGCGTTGCCCAAGGGCTTGCTGCAAGTaGGCCTTGGAACCAGGACGTTGTGCTGCGAACACCGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: GTKVTAMRCPRACCK*ALEPGRCAANTVSQ
Trigger: TTGGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCCCTTGGGCAACGCATGGCCGTAACCTTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CCA 90 bp CATGCACACATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTGGTTaGCAACGTCCTCAGGCTCCACTCGGTGGATCTCTGTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: HAHIGTAPSGRQLGG*QRPQAPLGGSLCLQ
Trigger: CTGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTGGAGCCTCCACTAGGAAAGTCAGGTCTTaGAGGATCAGAGGCACGAAG +
Preference number: 5 (lower is better)
Translates to: VLECQVPKDLAGLTGASTRKVRS*RIRGTK
Trigger: CTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCCT...AGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAGCAGAAGGGGGCCCATGGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: EQKGAHGTLSGQEGMGHSDVRCW*RHRAKC
Trigger: GCACTTTGCACGATGTCTCAACCAACATCTGACATC...GCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCCATGGGCCCCCTTCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGGCCCCAAAAAGCAGCTaGGCTCACAAGCCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRAPKSS*AHKPGH
Trigger: ATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGGC...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGGAGTTCCAAGGCTGTaGGAAGGGGTCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRGVPRL*EGVRRK
Trigger: CTTCCTCCTGACCCCTTCCAACAGCCTTGGAACTCC...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS TCA 90 bp CACAGCTACCAGGATGAGGGAATCCTCACGCCCCGCGGGCTCCTCTaGATATTGAAGTTTCTCCGTCACAGAGCCCAGAATGTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: HSYQDEGILTPRGLL*ILKFLRHRAQNVLH
Trigger: GTGCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 90 bp AGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTTaGTGGGTGGCTGGTTCTCCTCTGGAATCTTTAGTTCCACCGTCT +
Preference number: 5 (lower is better)
Translates to: RSLSGGSGGRVASPA*WVAGSPLESLVPPS
Trigger: AGACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS GCA 90 bp AGACAGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTaGTTGCTGGGTGGCTGGTTCTCCTCTGGAATCTTTAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: RQESIRRKWRKSGFT*LLGGWFSSGIFSST
Trigger: GGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 90 bp AGTCTATCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTTGCTaGGTGGCTGGTTCTCCTCTGGAATCTTTAGTTCCACCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLSGGSGGRVASPAC*VAGSPLESLVPPSP
Trigger: TGGAGACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 90 bp AGCTCATGCACACATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTaGTTGGCAACGTCCTCAGGCTCCACTCGGTGGATCTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: SSCTHRNSSQWKAVR*LATSSGSTRWISVS
Trigger: AGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 90 bp ACCTCATGCACACATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTaGTTGGCAACGTCCTCAGGCTCCACTCGGTGGATCTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: TSCTHRNSSQWKAVR*LATSSGSTRWISVS
Trigger: AGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS-3UTR CAA 90 bp AACATAATATTCCTGGGGGTCCCAGCCCTGACCAGGAAGAAGCTGGACAGGTGGAGCAGGTATAGATCCTaGATGATGTGGCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: NIIFLGVPALTRKKLDRWSRYRS*MMWPAP
Trigger: GGGGGCCGGCCACATCATCAAGGATCTATACCTGCT...CCACCTGTCCAGCTTCTTCCTGGTCAGGGCTGGGACCCCCAGGAATATTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATAAGGCAGTTAGGTGGTaGGCAACGTCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDKAVRW*ATSSGS
Trigger: GGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTT...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGGGCCGGCTCCGGTATTaGCGGATTGTCCTCACTTTT +
Preference number: 5 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRGRLRY*RIVLTF
Trigger: AAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCC...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCTGCACCCCTCAGGCCTaGAGGCTGGTGATGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RCQMLVETSCKVLECQVPCTPQA*RLVMGE
Trigger: CTCTCCCATCACCAGCCTCAAGGCCTGAGGGGTGCA...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGAGCAGCAGCTGCTTTaGCTACGGCTGTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: WLRHRAKCLSARCPRIWREQQLL*LRLLLS
Trigger: AGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCTC...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS TCA 90 bp ACCAGGATGAGGGAATCCTCACGCCCCGCGGGCTCCTCTGAATATTaGAGTTTCTCCGTCACAGAGCCCAGAATGTCCTGCACAGATGCT +
Preference number: 5 (lower is better)
Translates to: TRMRESSRPAGSSEY*SFSVTEPRMSCTDA
Trigger: AGCATCTGTGCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 90 bp CCTCCAGCTTGTAGGAGAGCTCGAAGAGGAGGTTCTGGTTGTCGATaGCCTGAAACTGGCGCACATAGGCCTTGGTCTGCAGGTGATTGG +
Preference number: 5 (lower is better)
Translates to: PPACRRARRGGSGCR*PETGAHRPWSAGDW
Trigger: CCAATCACCTGCAGACCAAGGCCTATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACCTCCTCTTCGAGCTCTCCTACAAGCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 90 bp AGAGGGAGCTGGAAGTCAGAAGCAGGGCATAGGAGAAGGGAAGCATaGGTGGAAGCGGCACAGCTTGGGAGTAACTCTCTCACCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RGSWKSEAGHRRREA*VEAAQLGSNSLTFE
Trigger: CTCAAAGGTGAGAGAGTTACTCCCAAGCTGTGCCGCTTCCACCCATGCTTCCCTTCTCCTATGCCCTGCTTCTGACTTCCAGCTCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS-3UTR CAA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGC +
Preference number: 5 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTSQAYR*LNPRVC
Trigger: GCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACT...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5
CDS-3UTR CAA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGCCCCCTCTTCCTCTaGAAGCAGCCCCTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDGPLFL*KQPLVG
Trigger: ACCTACCAGGGGCTGCTTCAAGAGGAAGAGGGGGCC...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCGGCCCCCTCTTCCTCTaGAAGCAGCCCCTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: PRERCQMLVETSCKVLECGPLFL*KQPLVG
Trigger: ACCTACCAGGGGCTGCTTCAAGAGGAAGAGGGGGCC...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGAGCAGGTATAGATCCTaGATGATGTGGCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: EQTYGSRGKSIDLFPVEQSRYRS*MMWPAP
Trigger: GGGGGCCGGCCACATCATCAAGGATCTATACCTGCT...CTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGATCTTGATGAACTTCTaGAGCAGCTGCGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: WLRHRAKCLSARCPRIWRILMNF*SSCARL
Trigger: CAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGAT...CCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCCGTGGAGCAGGAAGTaGCTCCACGGGAAAGATGTC +
Preference number: 5 (lower is better)
Translates to: LMGPGVNPSTSFPWSRKLPWSRK*LHGKDV
Trigger: GACATCTTTCCCGTGGAGCAACTTCCTGCTCCACGG...CAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GGGACACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGATGCTGCAAGAGGAAGTaGGAAGCTCCATCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GTLSGQEGMGHSTSYVHRCCKRK*EAPSPE
Trigger: TTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCA...TCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS GCA 90 bp CCGTCACAGAGCCCAGAATGTCCTGCACAGATGCTGAAAGGCGGCTaGGTATGGTCACATAAGAGTGGTCAGGCATGTATACACGGCAGA +
Preference number: 5 (lower is better)
Translates to: PSQSPECPAQMLKGG*VWSHKSGQACIHGR
Trigger: TCTGCCGTGTATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTAGCAGGTATAGATCCTaGATGATGTGGCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPSRYRS*MMWPAP
Trigger: GGGGGCCGGCCACATCATCAAGGATCTATACCTGCT...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCAGTGGCTTCACCTGCTaGCTGGGTGGCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PRERCQMLVETSCKVLECSGFTC*LGGWFS
Trigger: GGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACT...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATAGTGGCTTCACCTGCTaGCTGGGTGGCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDSGFTC*LGGWFS
Trigger: GGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACT...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTAAGGCAGTTAGGTGGTaGGCAACGTCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPKAVRW*ATSSGS
Trigger: GGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTT...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGATCTTGATGAACTTCTaGAGCAGCTGCGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LLQEEVGSSIPRTDLDGRILMNF*SSCARL
Trigger: CAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGAT...CCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp ACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTGACTACTCTCACTGACTGTTaGCCTCCAGCTTGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: TSCKVLECQVPKDLAGLTTLTDC*PPACRR
Trigger: TCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAGT...AGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCACTTTGCACGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATCCGTGGAGCAGGAAGTaGCTCCACGGGAAAGATGTC +
Preference number: 5 (lower is better)
Translates to: CKRKLEAPSPEQISMGGHPWSRK*LHGKDV
Trigger: GACATCTTTCCCGTGGAGCAACTTCCTGCTCCACGG...ATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCCCGTGGAGCAGGAAGTaGCTCCACGGGAAAGATGTC +
Preference number: 5 (lower is better)
Translates to: RGVKVIKALPESSGAFTVPWSRK*LHGKDV
Trigger: GACATCTTTCCCGTGGAGCAACTTCCTGCTCCACGG...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGCCCCAAAAAGCAGCTaGGCTCACAAGCCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPAPKSS*AHKPGH
Trigger: ATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGGC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS TCA 90 bp TCGTGCAGGAAAGTCAGGTCTAGGGGATGTGGAGAGAATCCAATGTaGGGAAAGGATAAGAGAGGAGTTCGAAAGGGGCCACTGCACCCG +
Preference number: 5 (lower is better)
Translates to: SCRKVRSRGCGENPM*GKDKRGVRKGPLHP
Trigger: CGGGTGCAGTGGCCCCTTTCGAACTCCTCTCTTATCCTTTCCTCACATTGGATTCTCTCCACATCCCCTAGACCTGACTTTCCTGCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS CCA 90 bp GATAACCGGGTCTCAGCATCATTTCAAAGAGTCAGGACAGGTCTGTaGCCTGGACACCTTCACTCACCTACCTGTGTACCCAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: DNRVSASFQRVRTGL*PGHLHSPTCVPKSG
Trigger: GCCTGACTTGGGTACACAGGTAGGTGAGTGAAGGTGTCCAGGCCACAGACCTGTCCTGACTCTTTGAAATGATGCTGAGACCCGGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544503.5
CDS CCA 90 bp TGGTGTAGCTCCTGCAGAAATTTCTCCGTCGGGAGGAAGAGAGAATaGGTAAGGACAATGTCATCCAGCAGGATATCTGAGGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: WCSSCRNFSVGRKRE*VRTMSSSRISEAAL
Trigger: CAGCGCCGCCTCAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAGTGGCTTCACCTGCTaGCTGGGTGGCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKSGFTC*LGGWFS
Trigger: GGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCAAGGCAGTTAGGTGGTaGGCAACGTCCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PRERCQMLVETSCKVLECKAVRW*ATSSGS
Trigger: GGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTT...GCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTCAGAGGGCCGCGATCTaGATGAACTTCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPQRAAI*MNFLSS
Trigger: GCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTG...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTACAGAGGGCCGCGATCTaGATGAACTTCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: APSPEQISMGGHRGRSFLQRAAI*MNFLSS
Trigger: GCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTG...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGGTCCTGGTTCTGCTaGCAGAGGGCCGCGATCTTG +
Preference number: 5 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLRSWFC*QRAAIL
Trigger: CAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAGGTCCTGGTTCTGCTaGCAGAGGGCCGCGATCTTG +
Preference number: 5 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKRSWFC*QRAAIL
Trigger: CAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CACTGTCAGGGCAAGAGGGCATGGGACACAGCACCTCCTATGTCCATAGAGGATTCCGGTATTTGCGGATaGTCCTCACTTTTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: HCQGKRAWDTAPPMSIEDSGICG*SSLFRP
Trigger: TGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGA...ATCCTCTATGGACATAGGAGGTGCTGTGTCCCATGCCCTCTTGCCCTGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCGGCCGGCTCCGGTATTaGCGGATTGTCCTCACTTTT +
Preference number: 5 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLGRLRY*RIVLTF
Trigger: AAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCC...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATCATCGTGCAAAGTGCTaGAGTGCCAGGTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDHRAKC*SARCPR
Trigger: CCTTGGGCACCTGGCACTCAAGCACTTTGCACGATG...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGTGCTGCAAGAGGAAGTaGGAAGCTCCATCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRCCKRK*EAPSPE
Trigger: TTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCA...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTGCTGCAAGAGGAAGTaGGAAGCTCCATCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RLMGPGVNPSTSFPWSRKCCKRK*EAPSPE
Trigger: TTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCA...CTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGGGAGTAAAGGTAATAAAGGCCTTGCCAGAGTCCAGTGGCGCCTTTACAGTCAAGGTAATAAAGGCCTaGCCAGAGTCCAGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: RGVKVIKALPESSGAFTVKVIKA*PESSGA
Trigger: GGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTT...GACTGTAAAGGCGCCACTGGACTCTGGCAAGGCCTTTATTACCTTTACTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS CCA 90 bp CAGAGCCCAGAATGTCCTGCACAGATGCTGAAAGGCGGCTGCGTATaGTCACATAAGAGTGGTCAGGCATGTATACACGGCAGAAGATCT +
Preference number: 5 (lower is better)
Translates to: QSPECPAQMLKGGCV*SHKSGQACIHGRRS
Trigger: AGATCTTCTGCCGTGTATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTGCAAACAGGTGGCTGTaGATGCCCAGTGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSANRWL*MPSAVK
Trigger: TTTCACCGCACTGGGCATCAACAGCCACCTGTTTGC...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGCATCGTGCAAAGTGCTaGAGTGCCAGGTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKHRAKC*SARCPR
Trigger: CCTTGGGCACCTGGCACTCAAGCACTTTGCACGATG...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGCATCGTGCAAAGTGCTaGAGTGCCAGGTGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLHRAKC*SARCPR
Trigger: CCTTGGGCACCTGGCACTCAAGCACTTTGCACGATG...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTGTAGTTTTGGCTaGAAGGAGCAATGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRKCSFG*KEQWGG
Trigger: CCCTCCCCATTGCTCCTTCAAGCCAAAACTACACTT...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS TCA 90 bp TTGAAGTTTCTCCGTCACAGAGCCCAGAATGTCCTGCACAGATGCTaGAAGGCGGCTGCGTATGGTCACATAAGAGTGGTCAGGCATGTA +
Preference number: 5 (lower is better)
Translates to: LKFLRHRAQNVLHRC*KAAAYGHIRVVRHV
Trigger: TACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGC +
Preference number: 5 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSSQAYR*LNPRVC
Trigger: GCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5
CDS-3UTR CAA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGCAAACAGGTGGCTGTaGATGCCCAGTGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VAPRERCQMLVETSCKVLANRWL*MPSAVK
Trigger: TTTCACCGCACTGGGCATCAACAGCCACCTGTTTGC...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCATTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTATCTTGATGAACTTCTaGAGCAGCTGCGCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: AFFPAARGSWKLHPQNRSILMNF*SSCARL
Trigger: CAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGAT...AGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGCAGAGGGCCGCGATCTaGATGAACTTCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLQRAAI*MNFLSS
Trigger: GCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTG...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAAGGAAAGTCAGGTCTTaGAGGATCAGAGGCACGAAG +
Preference number: 5 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQRKVRS*RIRGTK
Trigger: CTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCCT...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTAAGGAAAGTCAGGTCTTaGAGGATCAGAGGCACGAAG +
Preference number: 5 (lower is better)
Translates to: APSPEQISMGGHRGRSFLRKVRS*RIRGTK
Trigger: CTTCGTGCCTCTGATCCTCAAAGACCTGACTTTCCT...TAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAATCCGGTATTTGCGGATaGTCCTCACTTTTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: GSWKLHPQNRSRWEDIEESGICG*SSLFRP
Trigger: TGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGA...TTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAGCAGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAGTGTAGTTTTGGCTaGAAGGAGCAATGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EQEVAPRERCQMLVETSCKCSFG*KEQWGG
Trigger: CCCTCCCCATTGCTCCTTCAAGCCAAAACTACACTT...GCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGCTTTTGCTACGGCTGTaGCTGTCTCTTCAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: NRLMGPGVNPSTSFPWSRLLLRL*LSLQKG
Trigger: TCCCTTTTGAAGAGACAGCAACAGCCGTAGCAAAAG...CCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS-3UTR CAA 90 bp GGACTTCAGCAGGATGAACAGACTTATGGGTCCAGGGGTAAATCCATCGACCTCGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: GLQQDEQTYGSRGKSIDLDVRCW*RHRAKC
Trigger: GCACTTTGCACGATGTCTCAACCAACATCTGACATC...GAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCATCCTGCTGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS CCA 90 bp TGGTGTAGCTCCTGCAGAAATTTCTCCGTCGGGAGGAAGAGAGAATaGGTAAGGACAATGTCATCCAGCAGGATATCTGTGTACCCAAGT +
Preference number: 5 (lower is better)
Translates to: WCSSCRNFSVGRKRE*VRTMSSSRISVYPS
Trigger: ACTTGGGTACACAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS CCA 90 bp ATGGGTAAGGACAATGTCATCCAGCAGGATATCTGTAAAGATCAGTaGGCACCACAGATGTCAGGTGGGCACTTCCAGAACGAAACTGGA +
Preference number: 5 (lower is better)
Translates to: MGKDNVIQQDICKDQ*APQMSGGHFQNETG
Trigger: TCCAGTTTCGTTCTGGAAGTGCCCACCTGACATCTGTGGTGCCCACTGATCTTTACAGATATCCTGCTGGATGACATTGTCCTTACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538981.1
CDS CCA 90 bp TGGTGTAGCTCCTGCAGAAATTTCTCCGTCGGGAGGAAGAGAGAATaGGTAAGGACAATGTCATCCAGCAGGATATCTTTGATGGCCATG +
Preference number: 5 (lower is better)
Translates to: WCSSCRNFSVGRKRE*VRTMSSSRISLMAM
Trigger: CATGGCCATCAAAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541245.1
CDS CCA 90 bp TGGTGTAGCTCCTGCAGAAATTTCTCCGTCGGGAGGAAGAGAGAATaGGTAAGGACAATGTCATCCAGCAGGATATCTTGTCATGCTCTG +
Preference number: 5 (lower is better)
Translates to: WCSSCRNFSVGRKRE*VRTMSSSRISCHAL
Trigger: CAGAGCATGACAAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538884.1
CDS-3UTR CAA 90 bp TCCAGGGGTAAATCCATCGACCTCTTTCCCGTGGAGCAGGAAGTTGCTCCACGGGTCAGGTTCTCAAATTaGCGAAACAAGTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SRGKSIDLFPVEQEVAPRVRFSN*RNKFLN
Trigger: ATTCAAGAACTTGTTTCGCAAATTTGAGAACCTGAC...CCGTGGAGCAACTTCCTGCTCCACGGGAAAGAGGTCGATGGATTTACCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTTCCGGTATTTGCGGATaGTCCTCACTTTTTCGGCCA +
Preference number: 5 (lower is better)
Translates to: VAPRERCQMLVETSCKVLSGICG*SSLFRP
Trigger: TGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGA...AAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGACTCTCACTGACTGTTaGCCTCCAGCTTGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: LLHGKDVRCWLRHRAKCLTLTDC*PPACRR
Trigger: TCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAGT...CAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGATGATGTCAGATGTTGGTaGAGACATCGTGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SFLLQEEVGSSIPRTDLDDVRCW*RHRAKC
Trigger: GCACTTTGCACGATGTCTCAACCAACATCTGACATC...ATCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGGAAGTTGCTCCACGGGAAAGATGTCAGATGTTGGTTGAGACATCGTGCAAAGAAGTGTAGTTTTGGCTaGAAGGAGCAATGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: RKLLHGKDVRCWLRHRAKKCSFG*KEQWGG
Trigger: CCCTCCCCATTGCTCCTTCAAGCCAAAACTACACTT...CTTTGCACGATGTCTCAACCAACATCTGACATCTTTCCCGTGGAGCAACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TTCTTTCCTGCTGCAAGAGGAAGTTGGAAGCTCCATCCCCAGAACAGATCTCGACTTTTGCTACGGCTGTaGCTGTCTCTTCAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: FFPAARGSWKLHPQNRSRLLLRL*LSLQKG
Trigger: TCCCTTTTGAAGAGACAGCAACAGCCGTAGCAAAAG...TCGAGATCTGTTCTGGGGATGGAGCTTCCAACTTCCTCTTGCAGCAGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS TCA 90 bp CCTTCACTCACCTACCTGTGTACCCAAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCTTTCTCATACTCACAGAAATATGTG +
Preference number: 5 (lower is better)
Translates to: PSLTYLCTQVRPTDC*TQECAPFSYSQKYV
Trigger: CACATATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGTAGGTGAGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544503.5
CDS CCA 90 bp GGATATAGAAATATGTGGAGTTTATCTTCCTTCTGTGAGAAGAGCTaGGAAGGCCTCTTGGGTGAATTAGCATTGCCACTGGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GYRNMWSLSSFCEKS*EGLLGELALPLEAV
Trigger: CACCGCCTCCAGTGGCAATGCTAATTCACCCAAGAGGCCTTCCCAGCTCTTCTCACAGAAGGAAGATAAACTCCACATATTTCTATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456989.6
CDS-3UTR CAA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCGAAAGATGTCAGATGTaGGTTGAGACATCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RCQMLVETSCKVLECQVPERCQM*VETSCK
Trigger: TTTGCACGATGTCTCAACCAACATCTGACATCTTTC...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp CCACAATCCCACTCTGCAAGACAGAAGGGTGAGCAGCATTCTTTCCTGCTGCAAGAAAGATGTCAGATGTaGGTTGAGACATCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: PQSHSARQKGEQHSFLLQERCQM*VETSCK
Trigger: TTTGCACGATGTCTCAACCAACATCTGACATCTTTC...TTGCAGCAGGAAAGAATGCTGCTCACCCTTCTGTCTTGCAGAGTGGGATTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGAAAGATGTCAGATGTaGGTTGAGACATCGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPERCQM*VETSCK
Trigger: TTTGCACGATGTCTCAACCAACATCTGACATCTTTC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS TCA 90 bp CATCCAGCAGGATATCTGTGTACCCAAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCTTTCTCATACTCACAGAAATATGTG +
Preference number: 5 (lower is better)
Translates to: HPAGYLCTQVRPTDC*TQECAPFSYSQKYV
Trigger: CACATATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGATATCCTGCTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS CCA 90 bp TGGTGTAGCTCCTGCAGAAATTTCTCCGTCGGGAGGAAGAGAGAATaGGTAAGGACAATGTCATCCAGCAGGATATCTGTAAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: WCSSCRNFSVGRKRE*VRTMSSSRISVKIS
Trigger: ACTGATCTTTACAGATATCCTGCTGGATGACATTGTCCTTACCCATTCTCTCTTCCTCCCGACGGAGAAATTTCTGCAGGAGCTACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538981.1
CDS-3UTR CAA 90 bp TCCCCAGAACAGATCTCGATGGGAGGACATAGAGGAAGGAGCTTTCTATCCCCTGTCAGGTTCTCAAATTaGCGAAACAAGTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SPEQISMGGHRGRSFLSPVRFSN*RNKFLN
Trigger: ATTCAAGAACTTGTTTCGCAAATTTGAGAACCTGAC...AGGGGATAGAAAGCTCCTTCCTCTATGTCCTCCCATCGAGATCTGTTCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp AGATGTCAGATGTTGGTTGAGACATCGTGCAAAGTGCTTGAGTGCCAGGTGCCCGTCAGGTTCTCAAATTaGCGAAACAAGTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: RCQMLVETSCKVLECQVPVRFSN*RNKFLN
Trigger: ATTCAAGAACTTGTTTCGCAAATTTGAGAACCTGAC...GGGCACCTGGCACTCAAGCACTTTGCACGATGTCTCAACCAACATCTGACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS-3UTR CAA 90 bp GAACAAGACAGATCACTGTATAAAAGGGTCTGTACAACATTACCTATGATACAAGAGCAGCAGCTGCTTTaGCTACGGCTGTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: EQDRSLYKRVCTTLPMIQEQQLL*LRLLLS
Trigger: AGACAGCAACAGCCGTAGCAAAAGCAGCTGCTGCTC...TTGTATCATAGGTAATGTTGTACAGACCCTTTTATACAGTGATCTGTCTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000620260.6
CDS GCA 72 bp CCTCCAGCAAGCCGCTCCAGAACCCGGTTCAGAAGATaGTCGGGCCGCTCGGGGGCGCCCAGAGGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: PPASRSRTRFRR*SGRSGAPRGAQ
Trigger: CTGGGCCCCTCTGGGCGCCCCCGAGCGGCCCGAGCATCTTCTGAACCGGGTTCTGGAGCGGCTTGCTGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538884.1
ENST00000541245.1
ENST00000620260.6
CDS TCA 72 bp CGGAGGAAAGCGGGGAGCAGCAGGCGAGACACGCTCTaGCGCCGCTGCAACGACCGCTGTCCCCCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RRKAGSSRRDTL*RRCNDRCPPAG
Trigger: TCCAGCCGGGGGACAGCGGTCGTTGCAGCGGCGTCAGAGCGTGTCTCGCCTGCTGCTCCCCGCTTTCCTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS GCA 72 bp CCGCCGGGACCTCCCGCCACCGTTCGGCCCGCCAGCTaGGACGTCTGCTTCTTCAGAAATTTCTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: PPGPPATVRPAS*DVCFFRNFSSG
Trigger: GCCGCTGGAGAAATTTCTGAAGAAGCAGACGTCGCAGCTGGCGGGCCGAACGGTGGCGGGAGGTCCCGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS GCA 72 bp GCTGGCCAGAGTCCAGTGGCCAGTAGCCGGGGGAGGTaGCAGAGGAAAGGAGTGCTCGCTCTCAGCAACCCC +
Preference number: 6 (lower is better)
Translates to: AGQSPVASSRGR*QRKGVLALSNP
Trigger: GGGGTTGCTGAGAGCGAGCACTCCTTTCCTCTGGCACCTCCCCCGGCTACTGGCCACTGGACTCTGGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620260.6
CDS GCA 72 bp CAGAGGGCCGCGATCTTGATGAACTTCTTGAGCAGCTaGGCGCGCTTGCCCGGGGCCTCGCAGAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: QRAAILMNFLSS*ARLPGASQSST
Trigger: AGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 72 bp GCGATCTTGATGAACTTCTTGAGCAGCTGCGCGCGCTaGCCCGGGGCCTCGCAGAGCAGCACTTCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: AILMNFLSSCAR*PGASQSSTSVA
Trigger: GGCCACCGAAGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp GCGCACATAGGCCTTGGTCTGCAGGTGATTGGGGGATaGCTCCATGTCCAGGCAAAGGGGCCGGCTCCGGTA +
Preference number: 6 (lower is better)
Translates to: AHIGLGLQVIGG*LHVQAKGPAPV
Trigger: TACCGGAGCCGGCCCCTTTGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 72 bp ACCCGGGTCTGCAGACAGGAGTCTATCCGGCGGAAGTaGCGGAAGAGTGGCTTCACCTGCTTGCTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: TRVCRQESIRRK*RKSGFTCLLGG
Trigger: GCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 72 bp CCTGCTTGCTGGGTGGCTGGTTCTCCTCTGGAATCCTaGCATGGACACAGCTGGGCATCAGCACGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: PACWVAGSPLES*HGHSWASARPA
Trigger: GGCAGGGCGTGCTGATGCCCAGCTGTGTCCATGCCAGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CAA 72 bp TTCTGCTTGCAGAGGGCCGCGATCTTGATGAACTTCTaGAGCAGCTGCGCGCGCTTGCCCGGGGCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: FCLQRAAILMNF*SSCARLPGASQ
Trigger: CTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 90 bp AGGTCCTGGTTCTGCTTGCAGAGGGCCGCGATCTTGATGAACTTCTaGAGCAGCTGCGCGCGCTTGCCCGGGGCCTCGCAGAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: RSWFCLQRAAILMNF*SSCARLPGASQSST
Trigger: AGTGCTGCTCTGCGAGGCCCCGGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp AAGATCTCATCAGAGCCCCGGAAGGCCACCCGGGTCTaGAGACAGGAGTCTATCCGGCGGAAGTGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: KISSEPRKATRV*RQESIRRKWRK
Trigger: CTTCCGCCACTTCCGCCGGATAGACTCCTGTCTGCAGACCCGGGTGGCCTTCCGGGGCTCTGATGAGATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 72 bp GAAACTGGCGCACATAGGCCTTGGTCTGCAGGTGATTaGGGGATGCCTCCATGTCCAGGCAAAGGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: ETGAHRPWSAGD*GMPPCPGKGAG
Trigger: GCCGGCCCCTTTGCCTGGACATGGAGGCATCCCCCAATCACCTGCAGACCAAGGCCTATGTGCGCCAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp GGACCTTCTCTCCAGAGGAGGACACAGCTACCAGGATaGGGGAATCCTCACGCCCCGCGGGCTCCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: GPSLQRRTQLPG*GNPHAPRAPLN
Trigger: ATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTGGTAGCTGTGTCCTCCTCTGGAGAGAAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp TCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTTaGTGGGTGGCTGGTTCTCCTCTGGAATCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: SGGSGGRVASPA*WVAGSPLESWH
Trigger: ATGCCAGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CCA 72 bp CCATGCGTTGCCCAAGGGCTTGCTGCAAGTGAGCCTTaGAACCAGGACGTTGTGCTGCGAACACCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: PCVAQGLAASEP*NQDVVLRTPSP
Trigger: GGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCCCTTGGGCAACGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CAA 72 bp AGCAGGTCCTGGTTCTGCTTGCAGAGGGCCGCGATCTaGATGAACTTCTTGAGCAGCTGCGCGCGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SRSWFCLQRAAI*MNFLSSCARLP
Trigger: GGGCAAGCGCGCGCAGCTGCTCAAGAAGTTCATCAAGATCGCGGCCCTCTGCAAGCAGAACCAGGACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp TGCTTGAGTGCCAGGTGCCCAAGGATCTGGCGGGTCTaGCTGGAGCCTCCACTCTCACTGACTGTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: CLSARCPRIWRV*LEPPLSLTVCL
Trigger: GAGGCAAACAGTCAGTGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCTTGGGCACCTGGCACTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000620260.6
CDS CCA 72 bp GCAGCCCCTGGTAGGTGTCCAAGAAATGGAGAAGCATaGCTAGACAGGCTTGCTTCCGGCCCAGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: AAPGRCPRNGEA*LDRLASGPALQ
Trigger: CTGAAGGGCTGGGCCGGAAGCAAGCCTGTCTAGCCATGCTTCTCCATTTCTTGGACACCTACCAGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 72 bp TACATGTGTAAAGGTTCTGGGCAGCCACTGCGAGGGTaGGTTCGGCAGCTGCCAAGGCAGCTGAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: YMCKGSGQPLRG*VRQLPRQLKGR
Trigger: CCTTCCCTTCAGCTGCCTTGGCAGCTGCCGAACCCACCCTCGCAGTGGCTGCCCAGAACCTTTACACATGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538884.1
ENST00000538981.1
CDS CCA 72 bp TGGCGGAAGAGTGGCTTCACCTGCTTGCTGGGTGGCTaGTTCTCCTCTGGAATCCTGGCATGGACACAGCTG +
Preference number: 6 (lower is better)
Translates to: WRKSGFTCLLGG*FSSGILAWTQL
Trigger: CAGCTGTGTCCATGCCAGGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CAA 90 bp GCGTTGCCCAAGGGCTTGCTGCAAGTGAGCCTTGGAACCAGGACGTaGTGCTGCGAACACCGTCTCCCAATGGCACATTTCTCCCTCCAG +
Preference number: 6 (lower is better)
Translates to: ALPKGLLQVSLGTRT*CCEHRLPMAHFSLQ
Trigger: CTGGAGGGAGAAATGTGCCATTGGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCCCTTGGGCAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CAA 90 bp CAGGAGTCTATCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTaGCTGGGTGGCTGGTTCTCCTCTGGAATCTTTAGTTCCACCGTC +
Preference number: 6 (lower is better)
Translates to: QESIRRKWRKSGFTC*LGGWFSSGIFSSTV
Trigger: GACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGATAGACTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS GCA 72 bp ATCCTGGCATGGACACAGCTGGGCATCAGCACGCCCTaGCAGGCATATGGACAACCAACACCAAGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: ILAWTQLGISTP*QAYGQPTPSRQ
Trigger: TTGCCTGCTTGGTGTTGGTTGTCCATATGCCTGGCAGGGCGTGCTGATGCCCAGCTGTGTCCATGCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CCA 72 bp ATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTGGTTaGCAACGTCCTCAGGCTCCACTCGGTGGATCTCTG +
Preference number: 6 (lower is better)
Translates to: IGTAPSGRQLGG*QRPQAPLGGSL
Trigger: CAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 72 bp CATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTGGTaGGCAACGTCCTCAGGCTCCACTCGGTGGATCTCT +
Preference number: 6 (lower is better)
Translates to: HRNSSQWKAVRW*ATSSGSTRWIS
Trigger: AGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 72 bp GCCTCCATGTCCAGGCAAAGGGGCCGGCTCCGGTATTaGCGGATTGTCCTCACTTTTTCGGCCACTGAATGC +
Preference number: 6 (lower is better)
Translates to: ASMSRQRGRLRY*RIVLTFSATEC
Trigger: GCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACATGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 72 bp GCGGGTCTGACTGGAGCCTCCACTCTCACTGACTGTTaGCCTCCAGCTTGTAGGAGAGCTCGAAGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: AGLTGASTLTDC*PPACRRARRGG
Trigger: ACCTCCTCTTCGAGCTCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCTCCAGTCAGACCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 90 bp TCATGCACACATCGGAACAGCTCCCAGTGGAAGGCAGTTAGGTGGTaGGCAACGTCCTCAGGCTCCACTCGGTGGATCTCTGTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SCTHRNSSQWKAVRW*ATSSGSTRWISVSP
Trigger: TGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGTTGCCAACCACCTAACTGCCTTCCACTGGGAGCTGTTCCGATGTGTGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp AGGGAATCCTCACGCCCCGCGGGCTCCTCTGAATATTaGAGTTTCTCCGTCACAGAGCCCAGAATGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RESSRPAGSSEY*SFSVTEPRMSC
Trigger: GCAGGACATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp TCCGGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTTaGTGGGTGGCTGGTTCTCCTCTGGAATCTTTAGTT +
Preference number: 6 (lower is better)
Translates to: SGGSGGRVASPA*WVAGSPLESLV
Trigger: AACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS GCA 72 bp CCTCCATGTCCAGGCAAAGGGGCCGGCTCCGGTATTTaGGGATTGTCCTCACTTTTTCGGCCACTGAATGCA +
Preference number: 6 (lower is better)
Translates to: PPCPGKGAGSGI*GLSSLFRPLNA
Trigger: TGCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp GGCTTGCTGCAAGTGAGCCTTGGAACCAGGACGTTGTaGTGCGAACACCGTCTCCCAATGGCACATTTCTCC +
Preference number: 6 (lower is better)
Translates to: GLLQVSLGTRTL*CEHRLPMAHFS
Trigger: GGAGAAATGTGCCATTGGGAGACGGTGTTCGCAGCACAACGTCCTGGTTCCAAGGCTCACTTGCAGCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469209.1
CDS CCA 72 bp TGGCGGAAGAGTGGCTTCACCTGCTTGCTGGGTGGCTaGTTCTCCTCTGGAATCTTTAGTTCCACCGTCTCC +
Preference number: 6 (lower is better)
Translates to: WRKSGFTCLLGG*FSSGIFSSTVS
Trigger: GGAGACGGTGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CCA 72 bp GGCGGAAGTGGCGGAAGAGTGGCTTCACCTGCTTGCTaGGTGGCTGGTTCTCCTCTGGAATCTTTAGTTCCA +
Preference number: 6 (lower is better)
Translates to: GGSGGRVASPAC*VAGSPLESLVP
Trigger: TGGAACTAAAGATTCCAGAGGAGAACCAGCCACCCAGCAAGCAGGTGAAGCCACTCTTCCGCCACTTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000538981.1
ENST00000543876.5
ENST00000544503.5
ENST00000620260.6
CDS CAA 72 bp TGGAAGCGGCACAGCTTGGGAGTAACTCTCTCACCTTaGAGGATCAGAGGCACGAAGGGAATCACAGGGGGC +
Preference number: 6 (lower is better)
Translates to: WKRHSLGVTLSP*RIRGTKGITGG
Trigger: GCCCCCTGTGATTCCCTTCGTGCCTCTGATCCTCAAAGGTGAGAGAGTTACTCCCAAGCTGTGCCGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS CAA 90 bp AAGGATCTGGCGGGTCTGACTGGAGCCTCCACTCTCACTGACTGTTaGCCTCCAGCTTGTAGGAGAGCTCGAAGAGGAGGTTCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: KDLAGLTGASTLTDC*PPACRRARRGGSGC
Trigger: ACAACCAGAACCTCCTCTTCGAGCTCTCCTACAAGCTGGAGGCAAACAGTCAGTGAGAGTGGAGGCTCCAGTCAGACCCGCCAGATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264644.10
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 90 bp AAGCAGGGCATAGGAGAAGGGAAGCATGGGTGGAAGCGGCACAGCTaGGGAGTAACTCTCTCACCTTTGAGGATCAGAGGCACGAAGGGA +
Preference number: 6 (lower is better)
Translates to: KQGIGEGKHGWKRHS*GVTLSPLRIRGTKG
Trigger: TCCCTTCGTGCCTCTGATCCTCAAAGGTGAGAGAGTTACTCCCAAGCTGTGCCGCTTCCACCCATGCTTCCCTTCTCCTATGCCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS TCA 72 bp CTCCGTCACAGAGCCCAGAATGTCCTGCACAGATGCTaGAAGGCGGCTGCGTATGGTCACATAAGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: LRHRAQNVLHRC*KAAAYGHIRVV
Trigger: GACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCTCTGTGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp CAGGATGAGGGAATCCTCACGCCCCGCGGGCTCCTCTaGATATTGAAGTTTCTCCGTCACAGAGCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: QDEGILTPRGLL*ILKFLRHRAQN
Trigger: ATTCTGGGCTCTGTGACGGAGAAACTTCAATATTCAGAGGAGCCCGCGGGGCGTGAGGATTCCCTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CCA 72 bp TGGAAGTCAGAAGCAGGGCATAGGAGAAGGGAAGCATaGGTGGAAGCGGCACAGCTTGGGAGTAACTCTCTC +
Preference number: 6 (lower is better)
Translates to: WKSEAGHRRREA*VEAAQLGSNSL
Trigger: GAGAGAGTTACTCCCAAGCTGTGCCGCTTCCACCCATGCTTCCCTTCTCCTATGCCCTGCTTCTGACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS CAA 72 bp TGTCCAGGCAAAGGGGCCGGCTCCGGTATTTGCGGATaGTCCTCACTTTTTCGGCCACTGAATGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: CPGKGAGSGICG*SSLFRPLNAAS
Trigger: AGAAGCTGCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 90 bp ATGCCTCCATGTCCAGGCAAAGGGGCCGGCTCCGGTATTTGCGGATaGTCCTCACTTTTTCGGCCACTGAATGCAGCTTCTCGATGTTCA +
Preference number: 6 (lower is better)
Translates to: MPPCPGKGAGSGICG*SSLFRPLNAASRCS
Trigger: TGAACATCGAGAAGCTGCATTCAGTGGCCGAAAAAGTGAGGACAATCCGCAAATACCGGAGCCGGCCCCTTTGCCTGGACATGGAGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp TGTAGGAGAGCTCGAAGAGGAGGTTCTGGTTGTCGATaGCCTGAAACTGGCGCACATAGGCCTTGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: CRRARRGGSGCR*PETGAHRPWSA
Trigger: TGCAGACCAAGGCCTATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACCTCCTCTTCGAGCTCTCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS GCA 72 bp CAGGTGGGCACTTCCAGAACGAAACTGGAAATGCAGTaGCTCCCTCTCTTGCCCCTAAGGGCAAGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: QVGTSRTKLEMQ*LPLLPLRASSL
Trigger: AAGAGAACTTGCCCTTAGGGGCAAGAGAGGGAGGCACTGCATTTCCAGTTTCGTTCTGGAAGTGCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538981.1
CDS CAA 72 bp ATAGGAGAAGGGAAGCATGGGTGGAAGCGGCACAGCTaGGGAGTAACTCTCTCACCTTTGAGGATCAGAGGC +
Preference number: 6 (lower is better)
Translates to: IGEGKHGWKRHS*GVTLSPLRIRG
Trigger: GCCTCTGATCCTCAAAGGTGAGAGAGTTACTCCCAAGCTGTGCCGCTTCCACCCATGCTTCCCTTCTCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS CAA 90 bp AAGCATGGGTGGAAGCGGCACAGCTTGGGAGTAACTCTCTCACCTTaGAGGATCAGAGGCACGAAGGGAATCACAGGGGGCTTCATTTTG +
Preference number: 6 (lower is better)
Translates to: KHGWKRHSLGVTLSP*RIRGTKGITGGFIL
Trigger: CAAAATGAAGCCCCCTGTGATTCCCTTCGTGCCTCTGATCCTCAAAGGTGAGAGAGTTACTCCCAAGCTGTGCCGCTTCCACCCATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496032.1
CDS TCA 72 bp GCTCGCCTGTGTACCCAAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCTTTCTCATACTCACAG +
Preference number: 6 (lower is better)
Translates to: ARLCTQVRPTDC*TQECAPFSYSQ
Trigger: CTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538884.1
CDS CCA 72 bp GAATGTCCTGCACAGATGCTGAAAGGCGGCTGCGTATaGTCACATAAGAGTGGTCAGGCATGTATACACGGC +
Preference number: 6 (lower is better)
Translates to: ECPAQMLKGGCV*SHKSGQACIHG
Trigger: GCCGTGTATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS CAA 72 bp AAGGGCTCGCCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTC +
Preference number: 6 (lower is better)
Translates to: KGSPVYPSQAYR*LNPRVCTFLIL
Trigger: GAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGCGAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538884.1
CDS CAA 90 bp ATGTGGAGTTTATCTTCCTTCTGTGAGAAGAGCTGGGAAGGCCTCTaGGGTGAATTAGCATTGCCACTGGAGGCGGTGCCCATCTGTCCT +
Preference number: 6 (lower is better)
Translates to: MWSLSSFCEKSWEGL*GELALPLEAVPICP
Trigger: AGGACAGATGGGCACCGCCTCCAGTGGCAATGCTAATTCACCCAAGAGGCCTTCCCAGCTCTTCTCACAGAAGGAAGATAAACTCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456989.6
CDS CAA 90 bp GGCGAAGTCAAGGGCTCGCCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTCACAGAAATA +
Preference number: 6 (lower is better)
Translates to: GEVKGSPVYPSQAYR*LNPRVCTFLILTEI
Trigger: TATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGCGAGCCCTTGACTTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538884.1
CDS GCA 72 bp AGCCCAGAATGTCCTGCACAGATGCTGAAAGGCGGCTaGGTATGGTCACATAAGAGTGGTCAGGCATGTATA +
Preference number: 6 (lower is better)
Translates to: SPECPAQMLKGG*VWSHKSGQACI
Trigger: TATACATGCCTGACCACTCTTATGTGACCATACGCAGCCGCCTTTCAGCATCTGTGCAGGACATTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264644.10
ENST00000456989.6
ENST00000469209.1
ENST00000543876.5
ENST00000544503.5
ENST00000545893.5
ENST00000620260.6
CDS TCA 72 bp ACCTACCTGTGTACCCAAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCTTTCTCATACTCACAG +
Preference number: 6 (lower is better)
Translates to: TYLCTQVRPTDC*TQECAPFSYSQ
Trigger: CTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544503.5
CDS CCA 72 bp GAATTGGGTCAAGGATGCACCAGCAGCAATTTCAGGTaGTTAAGGGGGTCAGAAGAGAGGACAATGAGCAGT +
Preference number: 6 (lower is better)
Translates to: ELGQGCTSSNFR*LRGSEERTMSS
Trigger: ACTGCTCATTGTCCTCTCTTCTGACCCCCTTAACCACCTGAAATTGCTGCTGGTGCATCCTTGACCCAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS CAA 72 bp ACTCACCTACCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTC +
Preference number: 6 (lower is better)
Translates to: THLPVYPSQAYR*LNPRVCTFLIL
Trigger: GAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGTAGGTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544503.5
CDS CAA 90 bp GGACAACCAACACCAAGCAGGCAACATCAAGCAAGAATATCAGAATaGGGTCAAGGATGCACCAGCAGCAATTTCAGGTGGTTAAGGGGG +
Preference number: 6 (lower is better)
Translates to: GQPTPSRQHQARISE*GQGCTSSNFRWLRG
Trigger: CCCCCTTAACCACCTGAAATTGCTGCTGGTGCATCCTTGACCCAATTCTGATATTCTTGCTTGATGTTGCCTGCTTGGTGTTGGTTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545893.5
CDS TCA 72 bp GGATATCTGTGTACCCAAGTCAGGCCTACAGATTGCTaGACCCAAGAGTGTGCACCTTTCTCATACTCACAG +
Preference number: 6 (lower is better)
Translates to: GYLCTQVRPTDC*TQECAPFSYSQ
Trigger: CTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS CAA 72 bp AGCAGGATATCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTC +
Preference number: 6 (lower is better)
Translates to: SRISVYPSQAYR*LNPRVCTFLIL
Trigger: GAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGATATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS CAA 90 bp GACACCTTCACTCACCTACCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTCACAGAAATA +
Preference number: 6 (lower is better)
Translates to: DTFTHLPVYPSQAYR*LNPRVCTFLILTEI
Trigger: TATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGGTAGGTGAGTGAAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544503.5
CDS GCA 72 bp ACAATGTCATCCAGCAGGATATCTTTGATGGCCATGTaGACTTCTCTTCAGCGTATGTGGGAAGTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: TMSSSRISLMAM*TSLQRMWEVGQ
Trigger: CTGACCAACTTCCCACATACGCTGAAGAGAAGTGCACATGGCCATCAAAGATATCCTGCTGGATGACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541245.1
CDS CAA 90 bp ATGTCATCCAGCAGGATATCTGTGTACCCAAGTCAGGCCTACAGATaGCTGAACCCAAGAGTGTGCACCTTTCTCATACTCACAGAAATA +
Preference number: 6 (lower is better)
Translates to: MSSSRISVYPSQAYR*LNPRVCTFLILTEI
Trigger: TATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGGGTACACAGATATCCTGCTGGATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264644.10
CDS GCA 72 bp CCAAGTCAGGCCTACAGATTGCTGAACCCAAGAGTGTaGACCTTTCTCATACTCACAGAAATATGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: PSQAYRLLNPRV*TFLILTEICGV
Trigger: AACTCCACATATTTCTGTGAGTATGAGAAAGGTGCACACTCTTGGGTTCAGCAATCTGTAGGCCTGACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264644.10
ENST00000544503.5