RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000158987

Ensembl transcript IDs: ENST00000296859.10, ENST00000308008.10, ENST00000504039.2, ENST00000504575.5, ENST00000504919.1, ENST00000507093.5, ENST00000509018.6, ENST00000510071.5, ENST00000512052.5, ENST00000512611.5, ENST00000513227.5, ENST00000514179.5, ENST00000515170.5, ENST00000627212.2, ENST00000671916.1

Found 973 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCAGCCAGCTGAGAGCTGCAGGGTATGTCAGGTCAGACACAACCTaGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATA +
Preference number: 1 (lower is better)
Translates to: CSQLRAAGYVRSDTT*CYEMWGRHAAEHCI
Trigger: TATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGCTCTCAGCTGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR GCA 90 bp AGCCAGCTGAGAGCTGCAGGGTATGTCAGGTCAGACACAACCTGGTaGTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAG +
Preference number: 1 (lower is better)
Translates to: SQLRAAGYVRSDTTW*YEMWGRHAAEHCIK
Trigger: CTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGCTCTCAGCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CCA 90 bp GCTGCAGGGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTaGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCT +
Preference number: 1 (lower is better)
Translates to: AAGYVRSDTTWCYEM*GRHAAEHCIKSNSS
Trigger: AGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR GCA 90 bp CTTCAGTTGTTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTaGATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: LQLFLKLSEVNLYLW*ICAVGIREEAAGLP
Trigger: TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAACAACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR CCA 90 bp TTTCTTCAGTTGTTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTaGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: FLQLFLKLSEVNLYL*CICAVGIREEAAGL
Trigger: CAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAACAACTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR TCA 90 bp ATACCCATGAGGCTGGAAAAGTATGTCCTCTCAAGGGCTAAAAACTaGGAACCAAGAGACAATCATTTCTGTAACTCCAGCTCCTCTTTC +
Preference number: 1 (lower is better)
Translates to: IPMRLEKYVLSRAKN*EPRDNHFCNSSSSF
Trigger: GAAAGAGGAGCTGGAGTTACAGAAATGATTGTCTCTTGGTTCTCAGTTTTTAGCCCTTGAGAGGACATACTTTTCCAGCCTCATGGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CCA 90 bp CAACACATTTCTATAAAGGAGGCCACAAACCAACTAAATCCTATGTaGACACATACGGACAGCCATTCAGAAGTAAACCCCTTTTGGCTC +
Preference number: 1 (lower is better)
Translates to: QHISIKEATNQLNPM*THTDSHSEVNPFWL
Trigger: GAGCCAAAAGGGGTTTACTTCTGAATGGCTGTCCGTATGTGTCCACATAGGATTTAGTTGGTTTGTGGCCTCCTTTATAGAAATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR GCA 90 bp TTGTTGAAACTTACTATTTGGCAAAAGTTTGCACTGAGCGTTAACTaGTTCAACAGTCTTGGCAGATTGAGAGTTGTGGCAGGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: LLKLTIWQKFALSVN*FNSLGRLRVVAGRE
Trigger: CTCTCTTCCTGCCACAACTCTCAATCTGCCAAGACTGTTGAAGCAGTTAACGCTCAGTGCAAACTTTTGCCAAATAGTAAGTTTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR TCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 2 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAATGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 2 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAECRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCC +
Preference number: 2 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLVQSGD*YPGIAS
Trigger: GGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAACAAAATTTCATTCTGTaGAAATTAGGGTTCCCACCC +
Preference number: 2 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAEQNFIL*KLGFPP
Trigger: GGGTGGGAACCCTAATTTCCACAGAATGAAATTTTG...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 2 (lower is better)
Translates to: QRASYFSQTETYIALVLQWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTTCAGACACAACCTGGTaGTATGAGATGTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDISDTTW*YEMWGR
Trigger: CCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGA...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 2 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGGTAAACTTGTATCTGTaGTGCATCTGTGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: LAAVIRYDTANFVRGALRVNLYL*CICAVG
Trigger: ACCCACAGCACAGATGCACCACAGATACAAGTTTAC...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 2 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR TCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 2 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAAGGCAGTTCCGGCGTaGAAAGTGGAGACTGGTATC +
Preference number: 2 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEKAVPA*KVETGI
Trigger: GATACCAGTCTCCACTTTGCACGCCGGAACTGCCTT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGAACTTGTATCTGTGGTaGATCTGTGCTGTGGGTATA +
Preference number: 2 (lower is better)
Translates to: LAAVIRYDTANFVRGALRNLYLW*ICAVGI
Trigger: TATACCCACAGCACAGATGCACCACAGATACAAGTT...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAACCAGTCTCTATTTGTTaGATCTATACTTTCAGTTAC +
Preference number: 2 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAEPVSIC*IYTFSY
Trigger: GTAACTGAAAGTATAGATCCAACAAATAGAGACTGG...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGCCTACATTGCATTGGTaGTACAGATCAAGTCACATC +
Preference number: 2 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSPTLHW*YRSSHI
Trigger: GATGTGACTTGATCTGTAGCACCAATGCAATGTAGG...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR TCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGCTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 2 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 2 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCC +
Preference number: 2 (lower is better)
Translates to: RISLVLADNFNLSFSPSYVQSGD*YPGIAS
Trigger: GGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGCTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 2 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGCTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 2 (lower is better)
Translates to: QRASYFSQTETYIALVLQLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CAA 90 bp CTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATaGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAT +
Preference number: 2 (lower is better)
Translates to: LQRASYFSQTETYIA*VLQIKSHLCVDQAY
Trigger: ATATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 2 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 2 (lower is better)
Translates to: PGIASIAQETIYLQKLNECRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 2 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 2 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 2 (lower is better)
Translates to: YTRISLVLADNFNLSFSPLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR TCA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTTGTGATCAGCTGATCTaGACACTCACAGTTAAAGCT +
Preference number: 2 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSCDQLI*TLTVKA
Trigger: AGCTTTAACTGTGAGTGTTCAGATCAGCTGATCACA...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 2 (lower is better)
Translates to: YTRISLVLADNFNLSFSPRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 2 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR GCA 72 bp GTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTaGAGGGCTGCCAGTCCAGCCCTTTTCAAGAGCACT +
Preference number: 3 (lower is better)
Translates to: VVHLCCGYTGRG*RAASPALFKST
Trigger: AGTGCTCTTGAAAAGGGCTGGACTGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR-3UTR CAA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTTTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 3 (lower is better)
Translates to: LQVSPTYSGAALATDLAAFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR GCA 72 bp AGAGCTGCAGGGTATGTCAGGTCAGACACAACCTGGTaGTATGAGATGTGGGGGAGGCATGCTGCAGAACAC +
Preference number: 3 (lower is better)
Translates to: RAAGYVRSDTTW*YEMWGRHAAEH
Trigger: GTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp CTGAGAGCTGCAGGGTATGTCAGGTCAGACACAACCTaGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LRAAGYVRSDTT*CYEMWGRHAAE
Trigger: TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGCTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp TGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCCATTGCTCAGGAAACT +
Preference number: 3 (lower is better)
Translates to: WSQGSSGVQSGD*YPGIASIAQET
Trigger: AGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp GTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTaGAGACTGGTATCCAGGCATAGCATCCATTGCTCA +
Preference number: 3 (lower is better)
Translates to: VTVVPRQFRRAK*RLVSRHSIHCS
Trigger: TGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 3 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCTCAGGTCTATTTCATaGCTCGGAGTAGAGGGAATA +
Preference number: 3 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASLRSIS*LGVEGI
Trigger: TATTCCCTCTACTCCGAGCAATGAAATAGACCTGAG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR GCA 72 bp TTCTCCCACAAAATGTTACTGCAGCCAGCTGAGAGCTaGAGGGTATGTCAGGTCAGACACAACCTGGTGCTA +
Preference number: 3 (lower is better)
Translates to: FSHKMLLQPAES*RVCQVRHNLVL
Trigger: TAGCACCAGGTTGTGTCTGACCTGACATACCCTGCAGCTCTCAGCTGGCTGCAGTAACATTTTGTGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAGCAGACAATTTCAATTaGTCCTTCAGCCCAAGCTAT +
Preference number: 3 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAEADNFN*SFSPSY
Trigger: ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGC...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp AGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTT +
Preference number: 3 (lower is better)
Translates to: SCSLAMACRIMR*FLPIPPRLSVV
Trigger: AACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp TATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTaGGGGAGGCATGCTGCAGAACACTGCATAAAGTCA +
Preference number: 3 (lower is better)
Translates to: YVRSDTTWCYEM*GRHAAEHCIKS
Trigger: TGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 3 (lower is better)
Translates to: VQSGDWYPGIASIAQETIIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAACCCAGTCTCTATTTGTaGGATCTATACTTTCAGTTA +
Preference number: 3 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAEPSLYL*DLYFQL
Trigger: TAACTGAAAGTATAGATCCAACAAATAGAGACTGGG...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 3 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR GCA 72 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTaGATCTGTGCTGTGGGTATACGGGAAGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: FLKLSEVNLYLW*ICAVGIREEAA
Trigger: TGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR-3UTR CAA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCTGTGGCAGCTTCATTaGGCCTTCCACACCATGACC +
Preference number: 3 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFLWQLH*AFHTMT
Trigger: GGTCATGGTGTGGAAGGCCAAATGAAGCTGCCACAG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CCA 72 bp TTGTTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTaGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: LFLKLSEVNLYL*CICAVGIREEA
Trigger: AGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
3UTR-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 3 (lower is better)
Translates to: RISLVLADNFNLSFSPSYIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR TCA 72 bp AGGCTGGAAAAGTATGTCCTCTCAAGGGCTAAAAACTaGGAACCAAGAGACAATCATTTCTGTAACTCCAGC +
Preference number: 3 (lower is better)
Translates to: RLEKYVLSRAKN*EPRDNHFCNSS
Trigger: GCTGGAGTTACAGAAATGATTGTCTCTTGGTTCTCAGTTTTTAGCCCTTGAGAGGACATACTTTTCCAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR GCA 72 bp CTTACTATTTGGCAAAAGTTTGCACTGAGCGTTAACTaGTTCAACAGTCTTGGCAGATTGAGAGTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: LTIWQKFALSVN*FNSLGRLRVVA
Trigger: TGCCACAACTCTCAATCTGCCAAGACTGTTGAAGCAGTTAACGCTCAGTGCAAACTTTTGCCAAATAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 3 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 3 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR TCA 72 bp TATAATCATAGGACCACTGTTTATAGGCCAAATCACTaGAGTGTAACTTTCAAACTAGGATTTTTGGTTCAG +
Preference number: 3 (lower is better)
Translates to: YNHRTTVYRPNH*SVTFKLGFLVQ
Trigger: CTGAACCAAAAATCCTAGTTTGAAAGTTACACTTCAGTGATTTGGCCTATAAACAGTGGTCCTATGATTATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTARVHG*VHGHGP
Trigger: CGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGC...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRARVHG*VHGHGP
Trigger: CGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGC...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCAGGGAGTCCGCTCGGGTaGCTTCTTCCTCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPGSPLG*LLPQRL
Trigger: CAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCC...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCACAACCTGGTGCTATaGGATGTGGGGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASHNLVL*DVGEAC
Trigger: GCATGCCTCCCCCACATCTCATAGCACCAGGTTGTG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCCACGAGGTTGCTACTaGGAGAAGCTGGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLPRGCY*EKLVAV
Trigger: GACTGCCACCAGCTTCTCTCAGTAGCAACCTCGTGG...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANFFLNA*LAPGST
Trigger: CGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAA...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASSREAF*STTCLH
Trigger: GTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCAATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPILVVG*RRSGLL
Trigger: CAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTAT...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTGGAGGAGTGGGAGGTaGCTCCCTATACCTATCGTC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASWRSGR*LPIPIV
Trigger: GACGATAGGTATAGGGAGCCACCTCCCACTCCTCCA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCATCAAAGTCCCTCATTaGCAGCTGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGIKVPH*QLGGHL
Trigger: GAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGAT...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTTTAACAGCTGGCACCTaGAGCACCTGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LQVSPTYSGAALATDLAALTAGT*STWLTL
Trigger: CAGAGTAAGCCAGGTGCTTCAGGTGCCAGCTGTTAA...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVARVHG*VHGHGP
Trigger: CGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGC...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIARVHG*VHGHGP
Trigger: CGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGC...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR GCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGSREAF*STTCLH
Trigger: GTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGA...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCGCAGGAGATCAGGGCTaGTGGATGAGAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTAAGDQG*WMRVFQ
Trigger: CTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGC...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTACACTAGGTAGCGGGTaGGGTACCTTTCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLTLGSG*GTFPPP
Trigger: GGGCGGGGGAAAGGTACCGCACCCGCTACCTAGTGT...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTGGGAGTCCGCTCGGGTaGCTTCTTCCTCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLGSPLG*LLPQRL
Trigger: CAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCC...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCATCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTA +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPSLIDS*VATSMV
Trigger: TACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGA...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCGTGCAAATTAACAGCTaGCACCTGAAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIVQINS*HLKHLA
Trigger: AGCCAGGTGCTTCAGGTGCCAGCTGTTAATTTGCAC...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCFPMPQ*IQGLPG
Trigger: CCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAA...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCGCTTCCTTGACTCAGTaGCCTCTGTCGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIASLTQ*PLSKHH
Trigger: ATGATGTTTCGACAGAGGTCACTGAGTCAAGGAAGC...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAGTTGTTTGGCCAGCTaGCCTCATAGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQSCLAS*PHRHWR
Trigger: TCTCCAGTGCCTATGAGGTCAGCTGGCCAAACAACT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGGCAGCTCTGGCCACTaGTCTTGCTGCTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRGSSGH*SCCCDQ
Trigger: CTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCC...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTGGGACTGCCAGGGCCTaGGAGGAACACCGTTCATCC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVGTARA*EEHRSS
Trigger: GGATGAACGGTGTTCCTCTCAGGCCCTGGCAGTCCC...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGTCATGGGAGCTGCTTaGACACGAAGTCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQVMGAA*TRSPTS
Trigger: GGAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGAC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCGTCCAAGCCTTCAGATaGCTCAGCTGGGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGVQAFR*LSWGAL
Trigger: GAGAGCACCCCAGCTGAGTCATCTGAAGGCTTGGAC...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCACTGCTTACCAAAACTaGAAGGAGGCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVITAYQN*KEARPW
Trigger: CCATGGTCTTGCCTCCTTGCAGTTTTGGTAAGCAGT...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCGCCTTGTTCCCACAATaGTGTCATCTTGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIALFPQ*CHLVIG
Trigger: GCCAATCACAAGATGACAGCATTGTGGGAACAAGGC...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNILVVG*RRSGLL
Trigger: CAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTGGGAGTCCGCTCGGGTaGCTTCTTCCTCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVGSPLG*LLPQRL
Trigger: CAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCC...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCAAGGAGGCAAGACCATaGAGCCTTTCACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASKEARP*SLSQAQ
Trigger: CTGTGCTTGTGAAAGGCTCCATGGTCTTGCCTCCTT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTAAGGAGGCAAGACCATaGAGCCTTTCACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LQVSPTYSGAALATDLAAKEARP*SLSQAQ
Trigger: CTGTGCTTGTGAAAGGCTCCATGGTCTTGCCTCCTT...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCGCAAATGCAGGGAGCTaGTGCATAAACTCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIANAGS*CINSSN
Trigger: ATTGCTGGAGTTTATGCACCAGCTCCCTGCATTTGC...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTA +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCSLIDS*VATSMV
Trigger: TACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGA...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACGGTCAGTGGCATCCTTaGGGTCCAAGCCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNGQWHP*GPSLQM
Trigger: CATCTGAAGGCTTGGACCCCAAGGATGCCACTGACC...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTATAAACTGGGTCAGTaGCATCCTTGGGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASYKLGQ*HPWGPS
Trigger: GCTTGGACCCCAAGGATGCCACTGACCCAGTTTATA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAATCCCCAAATATCCTaGAGGAGTGGGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQNPQIS*RSGRWL
Trigger: GAGCCACCTCCCACTCCTCCAGGATATTTGGGGATT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAAGGTCAGACACAACCTaGTGCTATGAGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAERSDTT*CYEMWG
Trigger: CCCCCACATCTCATAGCACCAGGTTGTGTCTGACCT...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGGCTCCAAGTTGATCTaGGTAGTGCACGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASGSKLI*VVHVNG
Trigger: GCCATTAACGTGCACTACCCAGATCAACTTGGAGCC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCTCAGGTGTTGCCTTaGTCACAATGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQAQVLP*SQCVLS
Trigger: GGAAAGGACACATTGTGATCAAGGCAACACCTGAGC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTATCAAAGTCCCTCATTaGCAGCTGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTIKVPH*QLGGHL
Trigger: GAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGAT...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTTAACAGCTGGCACCTaGAGCACCTGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNLTAGT*STWLTL
Trigger: CAGAGTAAGCCAGGTGCTTCAGGTGCCAGCTGTTAA...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATCGTCCTTCTTGGGTaGGGTGACACAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASIVLLG*GDTVHN
Trigger: ATTGTGTACTGTGTCACCTCACCCAAGAAGGACGAT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAACAGTCTTGGCAGATTaGGAGTTGTGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAETVLAD*ELWQEE
Trigger: CTCTTCCTGCCACAACTCTCAATCTGCCAAGACTGT...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCA +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASTRSRP*NGSVRS
Trigger: TGATCGAACAGATCCATTGCAGGGGCGAGATCTTGT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGAGACGCTCAGGTGTTaGCTTGATCACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQETLRC*LDHNVS
Trigger: GGACACATTGTGATCAAGGCAACACCTGAGCGTCTC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCGAGACGCTCAGGTGTTaGCTTGATCACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGETLRC*LDHNVS
Trigger: GGACACATTGTGATCAAGGCAACACCTGAGCGTCTC...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGCCTTGTTCCCACAATaGTGTCATCTTGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASALFPQ*CHLVIG
Trigger: GCCAATCACAAGATGACAGCATTGTGGGAACAAGGC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASRLCLQ*LVPTML
Trigger: CAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCTGCTTCACCTTCCTTaGCATTTGGGCATCCTCATA +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASLLHLP*HLGILI
Trigger: TATGAGGATGCCCAAATGGCAAGGAAGGTGAAGCAG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAGTGGATTCAGGGACTaGCAGGGCCTGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLSGFRD*QGLRGT
Trigger: TGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATGACTCAGCTGGGGTaGTCTCCAATACTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASMTQLG*SPILSV
Trigger: AACAGAGAGTATTGGAGAGCACCCCAGCTGAGTCAT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGATATACGGGAAGAGGCTaGAGGGCTGCCAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGYTGRG*RAASPA
Trigger: GGCTGGACTGGCAGCCCTGCAGCCTCTTCCCGTATA...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAAGGAGGCAAGACCATaGAGCCTTTCACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQKEARP*SLSQAQ
Trigger: CTGTGCTTGTGAAAGGCTCCATGGTCTTGCCTCCTT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTC +
Preference number: 4 (lower is better)
Translates to: LQVSPTYSGAALATDLAAISPLQ*ICSINL
Trigger: GAGATTGATCGAACAGATCCATTGCAGGGGCGAGAT...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCAATGTGTCCTTTCCTaGTTCCACTCCGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASQCVLS*FHSGLV
Trigger: AACTAGACCGGAGTGGAACCAGGAAAGGACACATTG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCTCTCCTGGCACATGCTaGATAGAATGGCGATTACTT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVISPGTC*IEWRLL
Trigger: AAGTAATCGCCATTCTATCCAGCATGTGCCAGGAGA...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTGGGCTTTAGTTGTTTaGCCAGCTGACCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCWALVV*PADLIG
Trigger: GCCTATGAGGTCAGCTGGCCAAACAACTAAAGCCCA...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGCCACGGGTGAGTTCATaGCCACGGCCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRPRVSS*PRPGYS
Trigger: GGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGG...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTTGGAGGAGTGGGAGGTaGCTCCCTATACCTATCGTC +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTWRSGR*LPIPIV
Trigger: GACGATAGGTATAGGGAGCCACCTCCCACTCCTCCA...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGGTTTTAGGTGTGTGTaGGGTCCTTCCTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQGFRCV*GPSFRS
Trigger: GGACCTAAAGGAAGGACCCCACACACACCTAAAACC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCACCATTCCAATAGTTTaGTCCCAACATCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVITIPIV*SQHPKD
Trigger: GTCCTTTGGATGTTGGGATCAAACTATTGGAATGGT...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGCCACCTCAATGGTACTaGGCTGCAGCATGGATAGCT +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRPPQWY*AAAWIA
Trigger: AGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGG...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGAGTTGTTTGGCCAGCTaGCCTCATAGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRSCLAS*PHRHWR
Trigger: TCTCCAGTGCCTATGAGGTCAGCTGGCCAAACAACT...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCACTGATCTTGCTGCTGTaGTCAGATATGATACTGCCA +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPLILLL*SDMILP
Trigger: TGGCAGTATCATATCTGATCACAGCAGCAAGATCAG...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACGAATTTGTGCTTCCTTaGCTCAGTGACCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNEFVLP*LSDPRL
Trigger: GAGTCTGGGGTCACTGAGTCAAGGAAGCACAAATTC...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296859.10
ENST00000507093.5
CDS-3UTR TCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGGGACTGCCAGGGCCTaGGAGGAACACCGTTCATCC +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVGTARA*EEHRSS
Trigger: GGATGAACGGTGTTCCTCTCAGGCCCTGGCAGTCCC...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCACAACCTGGTGCTATaGGATGTGGGGGAGGCATGC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNHNLVL*DVGEAC
Trigger: GCATGCCTCCCCCACATCTCATAGCACCAGGTTGTG...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTCAATGGTACTGAGCTaGAGCATGGATAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGSMVLS*SMDSWL
Trigger: AAGCCAGCTATCCATGCTGCAGCTCAGTACCATTGA...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTAGTTCCTCTGAGTCTTaGTACAGATGCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQVSPTYSGAALATDLAASSSES*YRCQVQ
Trigger: TTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACT...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCTGCTTCACCTTCCTTaGCATTTGGGCATCCTCATA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQLLHLP*HLGILI
Trigger: TATGAGGATGCCCAAATGGCAAGGAAGGTGAAGCAG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGACTGGAAAGATACTaGTTCACCTTCCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIRLERY*FTFLAI
Trigger: AATGGCAAGGAAGGTGAAGCAGTATCTTTCCAGTCT...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAGTCAACAGAACAATTaGTCACGATGCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQSQQNN*SRCWTV
Trigger: CACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAGTTGTCATGGGAGCTaGTTGAACACGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQSCHGS*LNTKSN
Trigger: GTTGGACTTCGTGTTCAAGCAGCTCCCATGACAACT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAAGTTGTCATGGGAGCTaGTTGAACACGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAESCHGS*LNTKSN
Trigger: GTTGGACTTCGTGTTCAAGCAGCTCCCATGACAACT...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGAGTTGTCATGGGAGCTaGTTGAACACGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLSCHGS*LNTKSN
Trigger: GTTGGACTTCGTGTTCAAGCAGCTCCCATGACAACT...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAAGGCAGTTCCGGCGTaGAAAGTGGAGACTGGTATC +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLKAVPA*KVETGI
Trigger: GATACCAGTCTCCACTTTGCACGCCGGAACTGCCTT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGACACTAGGTAGCGGGTaGGGTACCTTTCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRTLGSG*GTFPPP
Trigger: GGGCGGGGGAAAGGTACCGCACCCGCTACCTAGTGT...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACGATGTGGGGGAGGCATaGTGCAGAACACTGCATAAA +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNDVGEA*CRTLHK
Trigger: TTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATC...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCAAGGCAGCTGTAAGGTaGAAGTCCAAAACCATAGGC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCKAAVR*KSKTIG
Trigger: GCCTATGGTTTTGGACTTGCACCTTACAGCTGCCTT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCAAATGCAGGGAGCTaGTGCATAAACTCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQANAGS*CINSSN
Trigger: ATTGCTGGAGTTTATGCACCAGCTCCCTGCATTTGC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASLSSCD*LRPPSL
Trigger: TAGTGATGGAGGCCTAAGCCAATCACAAGATGACAG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTSLIDS*VATSMV
Trigger: TACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGA...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCTCGAAACATCATAGCTaGGTCCATGTTAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVISKHHS*VHVSRS
Trigger: ACTTCTGCTAACATGGACCCAGCTATGATGTTTCGA...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAACCACGGGTGAGTTCATaGCCACGGCCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQPRVSS*PRPGYS
Trigger: GGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGG...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACGGGTTTGGAAGGCTTTaGAAGTTGTCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNGFGRL*KLSWEL
Trigger: CAGCTCCCATGACAACTTCCAAAGCCTTCCAAACCC...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTGGTCAGTGGCATCCTTaGGGTCCAAGCCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLGQWHP*GPSLQM
Trigger: CATCTGAAGGCTTGGACCCCAAGGATGCCACTGACC...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGACAGTTTTATAAACTaGGTCAGTGGCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASDSFIN*VSGILG
Trigger: CCCAAGGATGCCACTGACCCAGTTTATAAAACTGTC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTTGGTGCTATGAGATGTaGGGGAGGCATGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTWCYEM*GRHAAE
Trigger: TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCA...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCAGTAAACTTGTATCTGTaGTGCATCTGTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPVNLYL*CICAVG
Trigger: ACCCACAGCACAGATGCACCACAGATACAAGTTTAC...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGACCACGTTTCAGTCCTaGATCAGCAGCTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRTTFQS*ISSFAT
Trigger: GGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGT...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGATCAAAGTCCCTCATTaGCAGCTGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEIKVPH*QLGGHL
Trigger: GAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGAT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACGAATTTGTGCTTCCTTaGCTCAGTGACCTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANEFVLP*LSDLCR
Trigger: TCGACAGAGGTCACTGAGTCAAGGAAGCACAAATTC...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQFFLNA*LAPGST
Trigger: CGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTATTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVFFLNA*LAPGST
Trigger: CGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAA...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQLNQQL*YQVLLL
Trigger: AAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNILVVG*RRSGLL
Trigger: CAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTAT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCAGTTCCTCTGAGTCTTaGTACAGATGCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCSSSES*YRCQVQ
Trigger: TTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGAGTGGATTCAGGGACTaGCAGGGCCTGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSSGFRD*QGLRGT
Trigger: TGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACT...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTCTGTCTTTTCCAATaGCCCAGTGGATTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGLCLFQ*PSGFRD
Trigger: GTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAG...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATGACTCAGCTGGGGTaGTCTCCAATACTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNMTQLG*SPILSV
Trigger: AACAGAGAGTATTGGAGAGCACCCCAGCTGAGTCAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTAAGGCAGTTCCGGCGTaGAAAGTGGAGACTGGTATC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLKAVPA*KVETGI
Trigger: GATACCAGTCTCCACTTTGCACGCCGGAACTGCCTT...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCCTACATTGCATTGGTaGTACAGATCAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASPTLHW*YRSSHI
Trigger: GATGTGACTTGATCTGTAGCACCAATGCAATGTAGG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAACACTAGGTAGCGGGTaGGGTACCTTTCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQTLGSG*GTFPPP
Trigger: GGGCGGGGGAAAGGTACCGCACCCGCTACCTAGTGT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACCAATGTGTCCTTTCCTaGTTCCACTCCGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANQCVLS*FHSGLV
Trigger: AACTAGACCGGAGTGGAACCAGGAAAGGACACATTG...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCACTGTTCAATATCTCCTaGCACATGCTGGATAGAATG +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPLFNIS*HMLDRM
Trigger: CATTCTATCCAGCATGTGCCAGGAGATATTGAACAG...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAGACAACAGGGAAGAGTaGAATAATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAEDNREE*NNWRLH
Trigger: ATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTC...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACCACGGGTGAGTTCATaGCCACGGCCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIPRVSS*PRPGYS
Trigger: GGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGGTTTGGAAGGCTTTaGAAGTTGTCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTGFGRL*KLSWEL
Trigger: CAGCTCCCATGACAACTTCCAAAGCCTTCCAAACCC...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCCAGCTTTTTGGGTTTaGAAGGCTTTGGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQPAFWV*KALEVV
Trigger: GACAACTTCCAAAGCCTTCCAAACCCAAAAAGCTGG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGATCACATTTTCAGCCTaGGAGAGATTCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQITFSA*ERFSRR
Trigger: CCTCCTTGAGAATCTCTCCCAGGCTGAAAATGTGAT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGAACAAAAGAGAACCTaGTTGCCACTGTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQEQKRT*LPLYLS
Trigger: TGAGAGATACAGTGGCAATCAGGTTCTCTTTTGTTC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGGCTCAGGTGTTGCCTTaGTCACAATGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRAQVLP*SQCVLS
Trigger: GGAAAGGACACATTGTGATCAAGGCAACACCTGAGC...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCCTATTAAATGCATTATaGGACGCTCAGGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCLLNAL*DAQVLP
Trigger: AGGCAACACCTGAGCGTCTCATAATGCATTTAATAG...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGACCATTCCAATAGTTTaGTCCCAACATCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLTIPIV*SQHPKD
Trigger: GTCCTTTGGATGTTGGGATCAAACTATTGGAATGGT...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCACCATTCCAATAGTTTaGTCCCAACATCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCTIPIV*SQHPKD
Trigger: GTCCTTTGGATGTTGGGATCAAACTATTGGAATGGT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCTTCAATAACCGGAGATaGCCATTCATCTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVIFNNRR*PFIFVS
Trigger: AGATACAAAGATGAATGGTCATCTCCGGTTATTGAA...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGCTTCCTTGACTCAGTaGCCTCTGTCGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLASLTQ*PLSKHH
Trigger: ATGATGTTTCGACAGAGGTCACTGAGTCAAGGAAGC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGGGACTGCCAGGGCCTaGGAGGAACACCGTTCATCC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIGTARA*EEHRSS
Trigger: GGATGAACGGTGTTCCTCTCAGGCCCTGGCAGTCCC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGMISYP*SVLCLF
Trigger: GAAAAGACAGAGCACGCTTCAGGGATAGGAGATCAT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGTCCAAGCCTTCAGATaGCTCAGCTGGGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQVQAFR*LSWGAL
Trigger: GAGAGCACCCCAGCTGAGTCATCTGAAGGCTTGGAC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAATGTGATCAGCTGATCTaGACACTCACAGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAECDQLI*TLTVKA
Trigger: AGCTTTAACTGTGAGTGTTCAGATCAGCTGATCACA...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCTTGTTCTAGTCATATaGCAAACTAAGAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASLVLVI*QTKRRQ
Trigger: CTGCCTTCTCTTAGTTTGTCATATGACTAGAACAAG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAATTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQFFLNA*LAPGST
Trigger: CGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAA...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCA +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRTRSRP*NGSVRS
Trigger: TGATCGAACAGATCCATTGCAGGGGCGAGATCTTGT...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCATTCCATGCATGTACTaGTTATCCAGAGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCIPCMY*LSRVGV
Trigger: TACTCCCACTCTGGATAAGCAGTACATGCATGGAAT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCATTCCATGCATGTACTaGTTATCCAGAGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTAIPCMY*LSRVGV
Trigger: TACTCCCACTCTGGATAAGCAGTACATGCATGGAAT...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCGTCCTGACAATTCCATaGATGTACTGCTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCVLTIP*MYCLSR
Trigger: TCTGGATAAGCAGTACATGCATGGAATTGTCAGGAC...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCCGGTCTAGTTCCCGATaGTCATGTACCATAACAATT +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGRSSSR*SCTITI
Trigger: AATTGTTATGGTACATGAGCATCGGGAACTAGACCG...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGATATCTCCTGGCACATaGTGGATAGAATGGCGATTA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQISPGT*WIEWRL
Trigger: TAATCGCCATTCTATCCAGCATGTGCCAGGAGATAT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLRLCLQ*LVPTML
Trigger: CAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGCAGGAGATCAGGGCTaGTGGATGAGAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCAGDQG*WMRVFQ
Trigger: CTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCTCAATGGTACTGAGCTaGAGCATGGATAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGSMVLS*SMDSWL
Trigger: AAGCCAGCTATCCATGCTGCAGCTCAGTACCATTGA...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCACLNL*FLDSVT
Trigger: GGTCACTGAGTCAAGGAAGCACAAATTCAAACATGC...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGCTGCTTCACCTTCCTTaGCATTTGGGCATCCTCATA +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRLLHLP*HLGILI
Trigger: TATGAGGATGCCCAAATGGCAAGGAAGGTGAAGCAG...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAGTTGTCATGGGAGCTaGTTGAACACGAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLSCHGS*LNTKSN
Trigger: GTTGGACTTCGTGTTCAAGCAGCTCCCATGACAACT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGAAGGCAGTTCCGGCGTaGAAAGTGGAGACTGGTATC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEKAVPA*KVETGI
Trigger: GATACCAGTCTCCACTTTGCACGCCGGAACTGCCTT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCAGACACAACCTGGTaGTATGAGATGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSSDTTW*YEMWGR
Trigger: CCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGA...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGCACTGAGCGTTAACTaGTTCAACAGTCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLALSVN*FNSLGR
Trigger: TCTGCCAAGACTGTTGAAGCAGTTAACGCTCAGTGC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGGGAGTCCGCTCGGGTaGCTTCTTCCTCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIGSPLG*LLPQRL
Trigger: CAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCAAATGCAGGGAGCTaGTGCATAAACTCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTANAGS*CINSSN
Trigger: ATTGCTGGAGTTTATGCACCAGCTCCCTGCATTTGC...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCCTCTCCTTACAGACATaGTCATGTTTGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGLSLQT*SCLQMQ
Trigger: CTGCATTTGCAAACATGACCATGTCTGTAAGGAGAG...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCTGTTCAATATCTCCTaGCACATGCTGGATAGAATG +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLLFNIS*HMLDRM
Trigger: CATTCTATCCAGCATGTGCCAGGAGATATTGAACAG...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACGACAACAGGGAAGAGTaGAATAATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANDNREE*NNWRLH
Trigger: ATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTC...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCCTTGGCGGATTTCCTTaGAAATCATTCTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: VSPTYSGAALATDLAAVILGGFP*KSFLTS
Trigger: AGAAGTTAAGAATGATTTCCAAGGAAATCCGCCAAG...GATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGTCGAAACATCATAGCTaGGTCCATGTTAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQSKHHS*VHVSRS
Trigger: ACTTCTGCTAACATGGACCCAGCTATGATGTTTCGA...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGTGGGCTTTAGTTGTTTaGCCAGCTGACCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRWALVV*PADLIG
Trigger: GCCTATGAGGTCAGCTGGCCAAACAACTAAAGCCCA...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTGTGCAAATTAACAGCTaGCACCTGAAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLVQINS*HLKHLA
Trigger: AGCCAGGTGCTTCAGGTGCCAGCTGTTAATTTGCAC...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGATTCCGGGGCAGCTCTaGCCACTGATCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRIPGQL*PLILLL
Trigger: CAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAAT...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCACCACGGGTGAGTTCATaGCCACGGCCCGGGTACTCC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPPRVSS*PRPGYS
Trigger: GGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGG...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCAAATCTCACTATGGCTaGAGTCAGACAAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCKSHYG*SQTSCQ
Trigger: CTGACAACTTGTCTGACTCCAGCCATAGTGAGATTT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNVELQT*SQQNNC
Trigger: GCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTAC...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAACTGTCCCATAGTTTaGTTCATACGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQNCPIV*FIRVRQ
Trigger: CTGTCTGACACGTATGAACCAAACTATGGGACAGTT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATAATCCCCAAATATCCTaGAGGAGTGGGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNNPQIS*RSGRWL
Trigger: GAGCCACCTCCCACTCCTCCAGGATATTTGGGGATT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCCTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTGTCCAAGAACAACATaGGGACAGTTAATGAACCTA +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASCPRTT*GQLMNL
Trigger: TAGGTTCATTAACTGTCCCCATGTTGTTCTTGGACA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671916.1
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGCTCAGGTGTTGCCTTaGTCACAATGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEAQVLP*SQCVLS
Trigger: GGAAAGGACACATTGTGATCAAGGCAACACCTGAGC...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCCACCTCAATGGTACTaGGCTGCAGCATGGATAGCT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCPPQWY*AAAWIA
Trigger: AGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTTGCAAACATGGAATTaGAGTTCTTACATTCTCGAC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASLQTWN*SSYILD
Trigger: GTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTTTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLFPKFL*VLLQMP
Trigger: TGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAA...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCATGTCATATCTTTCTTaGCAACAGGGAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTAMSYLS*QQGRVE
Trigger: TTCCACTCTTCCCTGTTGTCAAGAAAGATATGACAT...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTTAACAGCTGGCACCTaGAGCACCTGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCLTAGT*STWLTL
Trigger: CAGAGTAAGCCAGGTGCTTCAGGTGCCAGCTGTTAA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAACCACGAGGTTGCTACTaGGAGAAGCTGGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQPRGCY*EKLVAV
Trigger: GACTGCCACCAGCTTCTCTCAGTAGCAACCTCGTGG...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCCAAAGGCTAGACTGCTaGAACTTGTTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCQRLDC*NLFIFI
Trigger: GATGAAAATGAACAAGTTTCAGCAGTCTAGCCTTTG...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCGGCAAAAGTTTGCACTaGGCGTTAACTGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGGKSLH*ALTAST
Trigger: TGTTGAAGCAGTTAACGCTCAGTGCAAACTTTTGCC...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCCTTTTTCCTCCAAACTaGTTACCAAAACTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTALFPPN*LPKLQG
Trigger: TCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAG...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCATAATAGCTCCAGCCTaGTCTACCACTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCIIAPA*STTSKI
Trigger: GATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTAT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCACATGAGTCAAGCTCTTaGCCATCTTCAAGAATAATA +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPHESSS*PSSRII
Trigger: TATTATTCTTGAAGATGGGCAAGAGCTTGACTCATG...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGAGACGCTCAGGTGTTaGCTTGATCACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNETLRC*LDHNVS
Trigger: GGACACATTGTGATCAAGGCAACACCTGAGCGTCTC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACATATCTCCTGGCACATaGTGGATAGAATGGCGATTA +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANISPGT*WIEWRL
Trigger: TAATCGCCATTCTATCCAGCATGTGCCAGGAGATAT...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGAGTCTTGCTACAGATaGCAGGTTCAAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRESCYR*QVQATY
Trigger: ATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTC...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTAGTTCCTCTGAGTCTTaGTACAGATGCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTSSSES*YRCQVQ
Trigger: TTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACT...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGAGTGGATTCAGGGACTaGCAGGGCCTGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWSGFRD*QGLRGT
Trigger: TGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTCTCTGTCTTTTCCAATaGCCCAGTGGATTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVLCLFQ*PSGFRD
Trigger: GTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAG...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCTCTGTCTTTTCCAATaGCCCAGTGGATTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNLCLFQ*PSGFRD
Trigger: GTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAG...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGCAGCCAGCTGAGAGCTaGAGGGTATGTCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWQPAES*RVCQVR
Trigger: TCTGACCTGACATACCCTGCAGCTCTCAGCTGGCTG...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCTGGAATTGGAGTAAATaGAGCTTAAGACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASWNWSK*SLRLLL
Trigger: CAAGAGAAGTCTTAAGCTGCATTTACTCCAATTCCA...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCTTGGTAAGATCAGCTaGAAGAGAAAGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLLGKIS*KRKIAV
Trigger: AACAGCTATCTTTCTCTTCCAGCTGATCTTACCAAG...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR CCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCCTTGGTAAGATCAGCTaGAAGAGAAAGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGLGKIS*KRKIAV
Trigger: AACAGCTATCTTTCTCTTCCAGCTGATCTTACCAAG...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGCACATGAGTCACCTGTaGATGAGGGTTTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRHMSHL*MRVFCE
Trigger: CTCACAGAAAACCCTCATCCACAGGTGACTCATGTG...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCTCTCCTGGCACATGCTaGATAGAATGGCGATTACTT +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGSPGTC*IEWRLL
Trigger: AAGTAATCGCCATTCTATCCAGCATGTGCCAGGAGA...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACCTGTTCAATATCTCCTaGCACATGCTGGATAGAATG +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNLFNIS*HMLDRM
Trigger: CATTCTATCCAGCATGTGCCAGGAGATATTGAACAG...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTLSSCD*LRPPSL
Trigger: TAGTGATGGAGGCCTAAGCCAATCACAAGATGACAG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTGCCAGGATATCTGAAGGATTaGAAAAATCCAACATACTGG +
Preference number: 4 (lower is better)
Translates to: YLWCICAVGIREEAAGLPGYLKD*KNPTYW
Trigger: CCAGTATGTTGGATTTTTCCAATCCTTCAGATATCC...TGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGGATATCTGAAGGATTaGAAAAATCCAACATACTGG +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASGYLKD*KNPTYW
Trigger: CCAGTATGTTGGATTTTTCCAATCCTTCAGATATCC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTA +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETISLIDS*VATSMV
Trigger: TACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGA...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGACAACAGGGAAGAGTaGAATAATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLDNREE*NNWRLH
Trigger: ATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCTTTGGAAGTTGTCATaGGAGCTGCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLLWKLS*ELLEHE
Trigger: TTCGTGTTCAAGCAGCTCCCATGACAACTTCCAAAG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGAGGGCTCAGAGTCAGTaGGTTCAACTTCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHERAQSQ*VQLQQW
Trigger: CCATTGCTGAAGTTGAACCCACTGACTCTGAGCCCT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGGTCAGTGGCATCCTTaGGGTCCAAGCCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQGQWHP*GPSLQM
Trigger: CATCTGAAGGCTTGGACCCCAAGGATGCCACTGACC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTGGAGGAGTGGGAGGTaGCTCCCTATACCTATCGTC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQWRSGR*LPIPIV
Trigger: GACGATAGGTATAGGGAGCCACCTCCCACTCCTCCA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTAATCCCCAAATATCCTaGAGGAGTGGGAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETINPQIS*RSGRWL
Trigger: GAGCCACCTCCCACTCCTCCAGGATATTTGGGGATT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGCTACTGAGAGAAGCTaGTGGCAGTCTAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIATERS*WQSREA
Trigger: AGCCTCTCTAGACTGCCACCAGCTTCTCTCAGTAGC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTTGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLCRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNVQSGD*YPGIAS
Trigger: GGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCAAAATTTCATTCTGTaGAAATTAGGGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQQNFIL*KLGFPP
Trigger: GGGTGGGAACCCTAATTTCCACAGAATGAAATTTTG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCAAACAAATGGAGATCTaGAATTGGAGTAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASKQMEI*NWSKCS
Trigger: GCTGCATTTACTCCAATTCCAGATCTCCATTTGTTT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANFKNHH*AEFSPY
Trigger: GTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAA...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTTTCCATCTGGATGACTaGTTTCCACAGTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLFHLDD*FPQCRL
Trigger: TAAACGGCACTGTGGAAATCAGTCATCCAGATGGAA...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTTCAATAACCGGAGATaGCCATTCATCTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCFNNRR*PFIFVS
Trigger: AGATACAAAGATGAATGGTCATCTCCGGTTATTGAA...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTACCACGTTTCAGTCCTaGATCAGCAGCTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETITTFQS*ISSFAT
Trigger: GGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGTTGATCAGGGATATCTaGAGGATTGGAAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQLIRDI*RIGKIQ
Trigger: TTGGATTTTTCCAATCCTTCAGATATCCCTGATCAA...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGCTAATTTGGAGAACTaGTCTGGAAGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLANLEN*SGSLLC
Trigger: ACAGAGAAGACTTCCAGATCAGTTCTCCAAATTAGC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCTCCTTAACTAGTTCTTaGGCATCTTCATCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTASLTSS*ASSSEH
Trigger: ATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGA...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGCCACCTCAATGGTACTaGGCTGCAGCATGGATAGCT +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQPPQWY*AAAWIA
Trigger: AGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGG...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCTTGCAAACATGGAATTaGAGTTCTTACATTCTCGAC +
Preference number: 4 (lower is better)
Translates to: TCICGASVLWVYGKRLQGLQTWN*SSYILD
Trigger: GTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAA...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVFPKFL*VLLQMP
Trigger: TGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATGTCATATCTTTCTTaGCAACAGGGAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNMSYLS*QQGRVE
Trigger: TTCCACTCTTCCCTGTTGTCAAGAAAGATATGACAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGGCTTCCTTGACTCAGTaGCCTCTGTCGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSASLTQ*PLSKHH
Trigger: ATGATGTTTCGACAGAGGTCACTGAGTCAAGGAAGC...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGGGACTGCCAGGGCCTaGGAGGAACACCGTTCATCC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFGTARA*EEHRSS
Trigger: GGATGAACGGTGTTCCTCTCAGGCCCTGGCAGTCCC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEMISYP*SVLCLF
Trigger: GAAAAGACAGAGCACGCTTCAGGGATAGGAGATCAT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGACTGCTTACCAAAACTaGAAGGAGGCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHETAYQN*KEARPW
Trigger: CCATGGTCTTGCCTCCTTGCAGTTTTGGTAAGCAGT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCATGAGTCAAGCTCTTaGCCATCTTCAAGAATAATA +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQHESSS*PSSRII
Trigger: TATTATTCTTGAAGATGGGCAAGAGCTTGACTCATG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCGGTCTAGTTCCCGATaGTCATGTACCATAACAATT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLRSSSR*SCTITI
Trigger: AATTGTTATGGTACATGAGCATCGGGAACTAGACCG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCGGTCTAGTTCCCGATaGTCATGTACCATAACAATT +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTRSSSR*SCTITI
Trigger: AATTGTTATGGTACATGAGCATCGGGAACTAGACCG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGCCTTGTTCCCACAATaGTGTCATCTTGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNALFPQ*CHLVIG
Trigger: GCCAATCACAAGATGACAGCATTGTGGGAACAAGGC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGRLCLQ*LVPTML
Trigger: CAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCT...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQILVVG*RRSGLL
Trigger: CAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTAT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAILVVG*RRSGLL
Trigger: CAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTAT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTCAATGGTACTGAGCTaGAGCATGGATAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHESMVLS*SMDSWL
Trigger: AAGCCAGCTATCCATGCTGCAGCTCAGTACCATTGA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGATTCTTCCTGATGGGGTaGAAATTAACAGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGFFLMG*KLTAGT
Trigger: GGTGCCAGCTGTTAATTTGCACCCCATCAGGAAGAA...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTATGACTCAGCTGGGGTaGTCTCCAATACTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVMTQLG*SPILSV
Trigger: AACAGAGAGTATTGGAGAGCACCCCAGCTGAGTCAT...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGATGACTCAGCTGGGGTaGTCTCCAATACTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEMTQLG*SPILSV
Trigger: AACAGAGAGTATTGGAGAGCACCCCAGCTGAGTCAT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 4 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTATCAGACACAACCTGGTaGTATGAGATGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVSDTTW*YEMWGR
Trigger: CCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGA...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCAAGAGGCTGCAGGGCTaGCAGTCCAGCCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGLECKDDATEIVSSVCFKRLQG*QSSPFQ
Trigger: TTGAAAAGGGCTGGACTGGCAGCCCTGCAGCCTCTT...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTCTTCGGGATTGTCTaGCAGGAATTTCTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANFFGIV*QEFLFV
Trigger: TACAAAGAGAAATTCCTGCCAGACAATCCCGAAGAA...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGCACATGAGTCACCTGTaGATGAGGGTTTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSHMSHL*MRVFCE
Trigger: CTCACAGAAAACCCTCATCCACAGGTGACTCATGTG...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR CCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGATGCTTCCAGAGTCACTaGCAATGCTACAACCAGACT +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGCFQSH*QCYNQT
Trigger: AGTCTGGTTGTAGCATTGCCAGTGACTCTGGAAGCA...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNISPLQ*ICSINL
Trigger: GAGATTGATCGAACAGATCCATTGCAGGGGCGAGAT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCTTCTATCAGCTAATTTaGAGAACTGATCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTAFYQLI*RTDLEV
Trigger: GACTTCCAGATCAGTTCTCCAAATTAGCTGATAGAA...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACGAAGAGTGGAATAATTaGAGGCTGCATACTTTGACT +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANEEWNN*RLHTLT
Trigger: AGTCAAAGTATGCAGCCTCCAATTATTCCACTCTTC...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGTCTCACTTAAATTCTTaGTCAAGGTACCATATGCAG +
Preference number: 4 (lower is better)
Translates to: CNCGPKAVPACKVETGIQSHLNS*SRYHMQ
Trigger: CTGCATATGGTACCTTGACCAAGAATTTAAGTGAGA...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGTGCAAATTAACAGCTaGCACCTGAAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIVQINS*HLKHLA
Trigger: AGCCAGGTGCTTCAGGTGCCAGCTGTTAATTTGCAC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTAGGGCTCAGAGTCAGTaGGTTCAACTTCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCRAQSQ*VQLQQW
Trigger: CCATTGCTGAAGTTGAACCCACTGACTCTGAGCCCT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTGTCAGACAGAGAACTaGAGGAGGTCCAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVCQTEN*RRSNSF
Trigger: GAAAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTGTCAGACAGAGAACTaGAGGAGGTCCAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHECQTEN*RRSNSF
Trigger: GAAAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGTGTCAGACAGAGAACTaGAGGAGGTCCAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSCQTEN*RRSNSF
Trigger: GAAAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACA...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTAATATCCTGGAGGAGTaGGAGGTGGCTCCCTATACC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVNILEE*EVAPYT
Trigger: GGTATAGGGAGCCACCTCCCACTCCTCCAGGATATT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGGTTTTAGGTGTGTGTaGGGTCCTTCCTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIGFRCV*GPSFRS
Trigger: GGACCTAAAGGAAGGACCCCACACACACCTAAAACC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTLHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGTGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSCRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCAGACCTACATTGCATTaGTGCTACAGATCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGRPTLH*CYRSSH
Trigger: GTGACTTGATCTGTAGCACCAATGCAATGTAGGTCT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACCAAAATTTCATTCTGTaGAAATTAGGGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNQNFIL*KLGFPP
Trigger: GGGTGGGAACCCTAATTTCCACAGAATGAAATTTTG...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCAACTAAATCCTATGTaGACACATACGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTQLNPM*THTDSH
Trigger: ATGGCTGTCCGTATGTGTCCACATAGGATTTAGTTG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGGACCAAGAAAGCTATaGAACCACCAAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNGPRKL*NHQASF
Trigger: GAATGAGGCTTGGTGGTTCCATAGCTTTCTTGGTCC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCAAAGCATTTGGCTTTaGCTCCTGATCAATGTGATC +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTQSIWL*LLINVI
Trigger: GATCACATTGATCAGGAGCCAAAGCCAAATGCTTTG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTTCCATCTGGATGACTaGTTTCCACAGTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEFHLDD*FPQCRL
Trigger: TAAACGGCACTGTGGAAATCAGTCATCCAGATGGAA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGCTCAGGTGTTGCCTTaGTCACAATGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQAQVLP*SQCVLS
Trigger: GGAAAGGACACATTGTGATCAAGGCAACACCTGAGC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTTGATCAGGGATATCTaGAGGATTGGAAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNLIRDI*RIGKIQ
Trigger: TTGGATTTTTCCAATCCTTCAGATATCCCTGATCAA...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGCCACCTCAATGGTACTaGGCTGCAGCATGGATAGCT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLPPQWY*AAAWIA
Trigger: AGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGG...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAATCAAAGTCCCTCATTaGCAGCTGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIIKVPH*QLGGHL
Trigger: GAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGAT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCFPKFL*VLLQMP
Trigger: TGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGAATTTGTGCTTCCTTaGCTCAGTGACCTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCEFVLP*LSDLCR
Trigger: TCGACAGAGGTCACTGAGTCAAGGAAGCACAAATTC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAAGTTGTTTGGCCAGCTaGCCTCATAGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQSCLAS*PHRHWR
Trigger: TCTCCAGTGCCTATGAGGTCAGCTGGCCAAACAACT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGTTAACAGCTGGCACCTaGAGCACCTGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPELTAGT*STWLTL
Trigger: CAGAGTAAGCCAGGTGCTTCAGGTGCCAGCTGTTAA...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGTCATGGGAGCTGCTTaGACACGAAGTCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQVMGAA*TRSPTS
Trigger: GGAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGAC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTCATGGGAGCTGCTTaGACACGAAGTCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLVMGAA*TRSPTS
Trigger: GGAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGAC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGTCATGGGAGCTGCTTaGACACGAAGTCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEVMGAA*TRSPTS
Trigger: GGAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGAC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGTCCAAGCCTTCAGATaGCTCAGCTGGGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPVQAFR*LSWGAL
Trigger: GAGAGCACCCCAGCTGAGTCATCTGAAGGCTTGGAC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTCCTTCTTGGGTGAGGTaGCACAGTACACAATCAAGC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVPSWVR*HSTQSS
Trigger: GCTTGATTGTGTACTGTGTCACCTCACCCAAGAAGG...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCCACGAGGTTGCTACTaGGAGAAGCTGGTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALPRGCY*EKLVAV
Trigger: GACTGCCACCAGCTTCTCTCAGTAGCAACCTCGTGG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAATGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCA +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETITRSRP*NGSVRS
Trigger: TGATCGAACAGATCCATTGCAGGGGCGAGATCTTGT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGATAATAGCTCCAGCCTaGTCTACCACTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLIIAPA*STTSKI
Trigger: GATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTAT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGAGACGCTCAGGTGTTaGCTTGATCACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQETLRC*LDHNVS
Trigger: GGACACATTGTGATCAAGGCAACACCTGAGCGTCTC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPSREAF*STTCLH
Trigger: GTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGA...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGCAGGAGATCAGGGCTaGTGGATGAGAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIAGDQG*WMRVFQ
Trigger: CTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTCAATGGTACTGAGCTaGAGCATGGATAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCSMVLS*SMDSWL
Trigger: AAGCCAGCTATCCATGCTGCAGCTCAGTACCATTGA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTTCAATGGTACTGAGCTaGAGCATGGATAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETISMVLS*SMDSWL
Trigger: AAGCCAGCTATCCATGCTGCAGCTCAGTACCATTGA...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLACLNL*FLDSVT
Trigger: GGTCACTGAGTCAAGGAAGCACAAATTCAAACATGC...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTTCTTCCTGATGGGGTaGAAATTAACAGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCFFLMG*KLTAGT
Trigger: GGTGCCAGCTGTTAATTTGCACCCCATCAGGAAGAA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTAGTCAACAGAACAATTaGTCACGATGCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETISQQNN*SRCWTV
Trigger: CACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTTGTTCATTTTCATCTaGTTCGCTATCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNLFIFI*FAICIS
Trigger: ACTGATGCAGATAGCGAAGCAGATGAAAATGAACAA...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGAAGGAGGCAAGACCATaGAGCCTTTCACAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWKEARP*SLSQAQ
Trigger: CTGTGCTTGTGAAAGGCTCCATGGTCTTGCCTCCTT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGTTCTTCGGGATTGTCTaGCAGGAATTTCTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLFFGIV*QEFLFV
Trigger: TACAAAGAGAAATTCCTGCCAGACAATCCCGAAGAA...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCTTGGTAAGATCAGCTaGAAGAGAAAGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTLGKIS*KRKIAV
Trigger: AACAGCTATCTTTCTCTTCCAGCTGATCTTACCAAG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTCTCCTGGCACATGCTaGATAGAATGGCGATTACTT +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVSPGTC*IEWRLL
Trigger: AAGTAATCGCCATTCTATCCAGCATGTGCCAGGAGA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCTTTGGAGAACTGATCTaGAAGTCTTCTCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: SGAALATDLAAVIRYDTAFGELI*KSSLFY
Trigger: ATAAAACAGAGAAGACTTCCAGATCAGTTCTCCAAA...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGTGCAGCATGGATAGCTaGCTTTCCTTAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRCSMDS*LSLTSS
Trigger: AGAACTAGTTAAGGAAAGCCAGCTATCCATGCTGCA...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTTGGGCTTTAGTTGTTTaGCCAGCTGACCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIWALVV*PADLIG
Trigger: GCCTATGAGGTCAGCTGGCCAAACAACTAAAGCCCA...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSVELQT*SQQNNC
Trigger: GCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTAC...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATATTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIFPMPQ*IQGLPG
Trigger: CCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAA...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCTTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPFPMPQ*IQGLPG
Trigger: CCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAA...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTCCAGCTTTTTGGGTTTaGAAGGCTTTGGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVPAFWV*KALEVV
Trigger: GACAACTTCCAAAGCCTTCCAAACCCAAAAAGCTGG...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGGGCTCAGAGTCAGTaGGTTCAACTTCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQRAQSQ*VQLQQW
Trigger: CCATTGCTGAAGTTGAACCCACTGACTCTGAGCCCT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGAGGGCTCAGAGTCAGTaGGTTCAACTTCAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWRAQSQ*VQLQQW
Trigger: CCATTGCTGAAGTTGAACCCACTGACTCTGAGCCCT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTATAAACTGGGTCAGTaGCATCCTTGGGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQYKLGQ*HPWGPS
Trigger: GCTTGGACCCCAAGGATGCCACTGACCCAGTTTATA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGAATATCCTGGAGGAGTaGGAGGTGGCTCCCTATACC +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLNILEE*EVAPYT
Trigger: GGTATAGGGAGCCACCTCCCACTCCTCCAGGATATT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAATATCCTGGAGGAGTaGGAGGTGGCTCCCTATACC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPENILEE*EVAPYT
Trigger: GGTATAGGGAGCCACCTCCCACTCCTCCAGGATATT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCTACTGAGAGAAGCTaGTGGCAGTCTAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQATERS*WQSREA
Trigger: AGCCTCTCTAGACTGCCACCAGCTTCTCTCAGTAGC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAATGGTGCTATGAGATGTaGGGGAGGCATGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQWCYEM*GRHAAE
Trigger: TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCA...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAAGGTCAGACACAACCTaGTGCTATGAGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQARSDTT*CYEMWG
Trigger: CCCCCACATCTCATAGCACCAGGTTGTGTCTGACCT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATGGAGATCTGGAATTaGAGTAAATGCAGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNMEIWN*SKCSLR
Trigger: TCTTAAGCTGCATTTACTCCAATTCCAGATCTCCAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGTTGAAACTTACTATTTaGCAAAAGTTTGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLLKLTI*QKFALS
Trigger: GCTCAGTGCAAACTTTTGCCAAATAGTAAGTTTCAA...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAATTGAAACTTACTATTTaGCAAAAGTTTGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAELKLTI*QKFALS
Trigger: GCTCAGTGCAAACTTTTGCCAAATAGTAAGTTTCAA...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTATCACATTTTCAGCCTaGGAGAGATTCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVITFSA*ERFSRR
Trigger: CCTCCTTGAGAATCTCTCCCAGGCTGAAAATGTGAT...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp TCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SLAMACRIMRWF*PIPPRLSVVFK
Trigger: TTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATTCTGCAGGCCATTGCTAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCTCAGGTGTTGCCTTaGTCACAATGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQAQVLP*SQCVLS
Trigger: GGAAAGGACACATTGTGATCAAGGCAACACCTGAGC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGACCACGTTTCAGTCCTaGATCAGCAGCTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPETTFQS*ISSFAT
Trigger: GGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGTCCTTAACTAGTTCTTaGGCATCTTCATCTGAACAT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLSLTSS*ASSSEH
Trigger: ATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGA...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCTCCTTAACTAGTTCTTaGGCATCTTCATCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGSLTSS*ASSSEH
Trigger: ATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGA...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCCCACCTCAATGGTACTaGGCTGCAGCATGGATAGCT +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPPPQWY*AAAWIA
Trigger: AGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGG...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAATCAAAGTCCCTCATTaGCAGCTGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPIKVPH*QLGGHL
Trigger: GAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGAT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGTTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRFPKFL*VLLQMP
Trigger: TGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAA...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGAATTTGTGCTTCCTTaGCTCAGTGACCTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWEFVLP*LSDLCR
Trigger: TCGACAGAGGTCACTGAGTCAAGGAAGCACAAATTC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGAACATCCAGCATGTTTaGATTTGTGCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRNIQHV*ICASLT
Trigger: AGTCAAGGAAGCACAAATTCAAACATGCTGGATGTT...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGAATTTGTGCTTCCTTaGCTCAGTGACCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIEFVLP*LSDPRL
Trigger: GAGTCTGGGGTCACTGAGTCAAGGAAGCACAAATTC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296859.10
ENST00000507093.5
CDS-3UTR TCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTGTTGTCAGATTTAGCTaGTGGAATAAGTGTGTAACC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLVVRFS*WNKCVT
Trigger: GGTTACACACTTATTCCATCAGCTAAATCTGACAAC...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAGTCCAAGCCTTCAGATaGCTCAGCTGGGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNEVQAFR*LSWGAL
Trigger: GAGAGCACCCCAGCTGAGTCATCTGAAGGCTTGGAC...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAACCTTCTTGGGTGAGGTaGCACAGTACACAATCAAGC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQPSWVR*HSTQSS
Trigger: GCTTGATTGTGTACTGTGTCACCTCACCCAAGAAGG...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCAAAGGCTAGACTGCTaGAACTTGTTCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGQRLDC*NLFIFN
Trigger: ATTGAAAATGAACAAGTTTCAGCAGTCTAGCCTTTG...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507093.5
CDS-3UTR TCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAAGAGTGCCATACCCATaGGGCTGGAAAAGTATGTCC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQARVPYP*GWKSMS
Trigger: GGACATACTTTTCCAGCCTCATGGGTATGGCACTCT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATCATCAGTTTTGTCTaGAGGTTCTTTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNIISFV*RFFFKT
Trigger: TGTCTTGAAAAAGAACCTGCAGACAAAACTGATGAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCATGAGTCAAGCTCTTaGCCATCTTCAAGAATAATA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTHESSS*PSSRII
Trigger: TATTATTCTTGAAGATGGGCAAGAGCTTGACTCATG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGCGGTCTAGTTCCCGATaGTCATGTACCATAACAATT +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHERSSSR*SCTITI
Trigger: AATTGTTATGGTACATGAGCATCGGGAACTAGACCG...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAGAGACGCTCAGGTGTTaGCTTGATCACAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAETLRC*LDHNVS
Trigger: GGACACATTGTGATCAAGGCAACACCTGAGCGTCTC...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTCTCCACTTAGCCTTTaGAGCACAGGCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVSPLSL*STGNIQ
Trigger: TTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYSREAF*STTCLH
Trigger: GTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGA...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGCCTTGTTCCCACAATaGTGTCATCTTGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVALFPQ*CHLVIG
Trigger: GCCAATCACAAGATGACAGCATTGTGGGAACAAGGC...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQRLCLQ*LVPTML
Trigger: CAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATAGAATATGTGTCGGATaGACCGGTCAAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNRICVG*TGQTKF
Trigger: GAATTTGGTTTGACCGGTGCATCCGACACATATTCT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGAGTCTTGCTACAGATaGCAGGTTCAAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIESCYR*QVQATY
Trigger: ATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTAGTTCCTCTGAGTCTTaGTACAGATGCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETISSSES*YRCQVQ
Trigger: TTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTCTGCTTCACCTTCCTTaGCATTTGGGCATCCTCATA +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVLLHLP*HLGILI
Trigger: TATGAGGATGCCCAAATGGCAAGGAAGGTGAAGCAG...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTTCTTCCTGATGGGGTaGAAATTAACAGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQFFLMG*KLTAGT
Trigger: GGTGCCAGCTGTTAATTTGCACCCCATCAGGAAGAA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTTTCTTCCTGATGGGGTaGAAATTAACAGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVFFLMG*KLTAGT
Trigger: GGTGCCAGCTGTTAATTTGCACCCCATCAGGAAGAA...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGTCAACAGAACAATTaGTCACGATGCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQSQQNN*SRCWTV
Trigger: CACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATAGTGGATTCAGGGACTaGCAGGGCCTGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYSGFRD*QGLRGT
Trigger: TGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCAGCCAGCTGAGAGCTaGAGGGTATGTCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALQPAES*RVCQVR
Trigger: TCTGACCTGACATACCCTGCAGCTCTCAGCTGGCTG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGCTAAATTCACATCAGTaGAGGGTCTTTTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRLNSHQ*RVFCLS
Trigger: GGACAAACAAAAGACCCTGCACTGATGTGAATTTAG...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTTCCAGAGTCACTaGCAATGCTACAACCAGACT +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWCFQSH*QCYNQT
Trigger: AGTCTGGTTGTAGCATTGCCAGTGACTCTGGAAGCA...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTTGCTTCCAGAGTCACTaGCAATGCTACAACCAGACT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVCFQSH*QCYNQT
Trigger: AGTCTGGTTGTAGCATTGCCAGTGACTCTGGAAGCA...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAATCAACAGGTCCTTCTaGAAGACGTGTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGINRSF*KTCQIY
Trigger: GTAGATTTGACACGTCTTCCAGAAGGACCTGTTGAT...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTC +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWISPLQ*ICSINL
Trigger: GAGATTGATCGAACAGATCCATTGCAGGGGCGAGAT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGCAAATGCAGGGAGCTaGTGCATAAACTCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQANAGS*CINSSN
Trigger: ATTGCTGGAGTTTATGCACCAGCTCCCTGCATTTGC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGCTCTCCTTACAGACATaGTCATGTTTGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSLSLQT*SCLQMQ
Trigger: CTGCATTTGCAAACATGACCATGTCTGTAAGGAGAG...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGCAATGTGTCCTTTCCTaGTTCCACTCCGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQQCVLS*FHSGLV
Trigger: AACTAGACCGGAGTGGAACCAGGAAAGGACACATTG...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTCAATGTGTCCTTTCCTaGTTCCACTCCGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVQCVLS*FHSGLV
Trigger: AACTAGACCGGAGTGGAACCAGGAAAGGACACATTG...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACATCTTCTATATAAGTTaGATCCACGATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: GAALATDLAAVIRYDTANIFYIS*IHDGMF
Trigger: GAACATTCCATCGTGGATCCAACTTATATAGAAGAT...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGATATCTGAAGGATTaGAAAAATCCAACATACTGG +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTGYLKD*KNPTYW
Trigger: CCAGTATGTTGGATTTTTCCAATCCTTCAGATATCC...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTTTCTATCAGCTAATTTaGAGAACTGATCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTFYQLI*RTDLEV
Trigger: GACTTCCAGATCAGTTCTCCAAATTAGCTGATAGAA...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTGCAGCATGGATAGCTaGCTTTCCTTAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHECSMDS*LSLTSS
Trigger: AGAACTAGTTAAGGAAAGCCAGCTATCCATGCTGCA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGACAACAGGGAAGAGTaGAATAATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCDNREE*NNWRLH
Trigger: ATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGTCATTCGAACAACTTaGCGGATTTCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGVIRTT*RISLEI
Trigger: GATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGAC...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTACCTTCCTTGCCATTTaGGCATCCTCATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCTFLAI*ASSYSF
Trigger: GAAGCTATATGAGGATGCCCAAATGGCAAGGAAGGT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTGCAAATTAACAGCTaGCACCTGAAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLVQINS*HLKHLA
Trigger: AGCCAGGTGCTTCAGGTGCCAGCTGTTAATTTGCAC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATAAATCTCACTATGGCTaGAGTCAGACAAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNKSHYG*SQTSCQ
Trigger: CTGACAACTTGTCTGACTCCAGCCATAGTGAGATTT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTGAAGAAATCTCACTATaGCTGGAGTCAGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVEEISL*LESDKL
Trigger: CAACTTGTCTGACTCCAGCCATAGTGAGATTTCTTC...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGGGTTTGGAAGGCTTTaGAAGTTGTCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLGFGRL*KLSWEL
Trigger: CAGCTCCCATGACAACTTCCAAAGCCTTCCAAACCC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTGTTCAACTTCAGCAATaGGGTCATCCAAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVVQLQQ*GHPNGY
Trigger: ATACCCATTTGGATGACCCCATTGCTGAAGTTGAAC...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGACAGTTTTATAAACTaGGTCAGTGGCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCDSFIN*VSGILG
Trigger: CCCAAGGATGCCACTGACCCAGTTTATAAAACTGTC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIVQSGD*YPGIAS
Trigger: GGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGAGACCTACATTGCATTaGTGCTACAGATCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHERPTLH*CYRSSH
Trigger: GTGACTTGATCTGTAGCACCAATGCAATGTAGGTCT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGGCTCCAAGTTGATCTaGGTAGTGCACGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLGSKLI*VVHVNG
Trigger: GCCATTAACGTGCACTACCCAGATCAACTTGGAGCC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAAACTACAAAGCATTTaGCTTTGGCTCCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLKLQSI*LWLLIN
Trigger: ATTGATCAGGAGCCAAAGCCAAATGCTTTGTAGTTT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCAAACAAATGGAGATCTaGAATTGGAGTAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGKQMEI*NWSKCS
Trigger: GCTGCATTTACTCCAATTCCAGATCTCCATTTGTTT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGGACATTAATCTAAGCTaGTGTTCCCTGAGATTTGAT +
Preference number: 4 (lower is better)
Translates to: LAAVIRYDTANFVRGALRDINLS*CSLRFD
Trigger: ATCAAATCTCAGGGAACATCAGCTTAGATTAATGTC...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTCTGGCAATCGTTTCTaGACAAAAGAGAACCTGATT +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVSGNRF*TKENLI
Trigger: AATCAGGTTCTCTTTTGTTCAGAAACGATTGCCAGA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTTCCATCTGGATGACTaGTTTCCACAGTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQFHLDD*FPQCRL
Trigger: TAAACGGCACTGTGGAAATCAGTCATCCAGATGGAA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTCTATTAAATGCATTATaGGACGCTCAGGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETILLNAL*DAQVLP
Trigger: AGGCAACACCTGAGCGTCTCATAATGCATTTAATAG...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCTATTAAATGCATTATaGGACGCTCAGGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCLLNAL*DAQVLP
Trigger: AGGCAACACCTGAGCGTCTCATAATGCATTTAATAG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAACCACGTTTCAGTCCTaGATCAGCAGCTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSITTFQS*ISSFAT
Trigger: GGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCAATTTTGGGAATATaGGGAACACCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGAILGI*GTPDFS
Trigger: AGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGC...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTTTGCAAACATGGAATTaGAGTTCTTACATTCTCGAC +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLLQTWN*SSYILD
Trigger: GTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAA...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCA +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIFPKFL*VLLQMP
Trigger: TGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATAGTTGTTTGGCCAGCTaGCCTCATAGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYSCLAS*PHRHWR
Trigger: TCTCCAGTGCCTATGAGGTCAGCTGGCCAAACAACT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAATCGTCCTTCTTGGGTaGGGTGACACAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIIVLLG*GDTVHN
Trigger: ATTGTGTACTGTGTCACCTCACCCAAGAAGGACGAT...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGCAAAGGCTAGACTGCTaGAACTTGTTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEQRLDC*NLFIFI
Trigger: GATGAAAATGAACAAGTTTCAGCAGTCTAGCCTTTG...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCTGGCCTGCAGAATCATaGGGTGGTTCTTGCCCATTC +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALWPAES*GGSCPF
Trigger: GAATGGGCAAGAACCACCTCATGATTCTGCAGGCCA...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCACAGTCTTGGCAGATTaGGAGTTGTGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPTVLAD*ELWQEE
Trigger: CTCTTCCTGCCACAACTCTCAATCTGCCAAGACTGT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGACTGCTTACCAAAACTaGAAGGAGGCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLTAYQN*KEARPW
Trigger: CCATGGTCTTGCCTCCTTGCAGTTTTGGTAAGCAGT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAACTGCTTACCAAAACTaGAAGGAGGCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQITAYQN*KEARPW
Trigger: CCATGGTCTTGCCTCCTTGCAGTTTTGGTAAGCAGT...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTCTTTTTCCTCCAAACTaGTTACCAAAACTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVLFPPN*LPKLQG
Trigger: TCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAG...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTAATGCAGGGAGCTGGTaGATAAACTCCAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVNAGSW*INSSNC
Trigger: ACAATTGCTGGAGTTTATGCACCAGCTCCCTGCATT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTATTCCATGCATGTACTaGTTATCCAGAGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIIPCMY*LSRVGV
Trigger: TACTCCCACTCTGGATAAGCAGTACATGCATGGAAT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTCTCCACTTAGCCTTTaGAGCACAGGCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCSPLSL*STGNIQ
Trigger: TTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTCTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDILNQQL*YQVLLL
Trigger: AAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAG...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGCAGGAGATCAGGGCTaGTGGATGAGAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFAGDQG*WMRVFQ
Trigger: CTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTAGAATATGTGTCGGATaGACCGGTCAAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCRICVG*TGQTKF
Trigger: GAATTTGGTTTGACCGGTGCATCCGACACATATTCT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCACLNL*FLDSVT
Trigger: GGTCACTGAGTCAAGGAAGCACAAATTCAAACATGC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGTTCTTCCTGATGGGGTaGAAATTAACAGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEFFLMG*KLTAGT
Trigger: GGTGCCAGCTGTTAATTTGCACCCCATCAGGAAGAA...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAAGTCAACAGAACAATTaGTCACGATGCTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQSQQNN*SRCWTV
Trigger: CACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAAGGCTTCCTTTACACTaGCCACAAGTTCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQRLPLH*PQVLEQ
Trigger: CTGCTCTAGAACTTGTGGGCAGTGTAAAGGAAGCCT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCCTACATTGCATTGGTaGTACAGATCAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCPTLHW*YRSSHI
Trigger: GATGTGACTTGATCTGTAGCACCAATGCAATGTAGG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTATAGGAGACAAACATTaGTTGTTACAGGATACCTTA +
Preference number: 4 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTIGDKH*LLQDTL
Trigger: TAAGGTATCCTGTAACAAGCAATGTTTGTCTCCTAT...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATTTCTTCGGGATTGTCTaGCAGGAATTTCTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNFFGIV*QEFLFV
Trigger: TACAAAGAGAAATTCCTGCCAGACAATCCCGAAGAA...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTTCTTCGGGATTGTCTaGCAGGAATTTCTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEFFGIV*QEFLFV
Trigger: TACAAAGAGAAATTCCTGCCAGACAATCCCGAAGAA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCACACATGAGTCACCTGTaGATGAGGGTTTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAHMSHL*MRVFCE
Trigger: CTCACAGAAAACCCTCATCCACAGGTGACTCATGTG...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTATCAACAGGTCCTTCTaGAAGACGTGTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCINRSF*KTCQIY
Trigger: GTAGATTTGACACGTCTTCCAGAAGGACCTGTTGAT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGCAATGTGTCCTTTCCTaGTTCCACTCCGGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEQCVLS*FHSGLV
Trigger: AACTAGACCGGAGTGGAACCAGGAAAGGACACATTG...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGCTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRLSSCD*LRPPSL
Trigger: TAGTGATGGAGGCCTAAGCCAATCACAAGATGACAG...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALSLIDS*VATSMV
Trigger: TACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGA...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGACCCAGAATGTCTCTTaGTTTACAATGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHETQNVS*FTMSSN
Trigger: GTTTGAGGACATTGTAAACCAAGAGACATTCTGGGT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGACAACAGGGAAGAGTaGAATAATTGGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVDNREE*NNWRLH
Trigger: ATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTC...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTCTTGGCGGATTTCCTTaGAAATCATTCTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLLGGFP*KSFLTS
Trigger: AGAAGTTAAGAATGATTTCCAAGGAAATCCGCCAAG...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGACCTTCCTTGCCATTTaGGCATCCTCATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQTFLAI*ASSYSF
Trigger: GAAGCTATATGAGGATGCCCAAATGGCAAGGAAGGT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATATGGGCTTTAGTTGTTTaGCCAGCTGACCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIWALVV*PADLIG
Trigger: GCCTATGAGGTCAGCTGGCCAAACAACTAAAGCCCA...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATGTCAGACAGAGAACTaGAGGAGGTCCAACTCTTTC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQICQTEN*RRSNSF
Trigger: GAAAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGGTCAGTGGCATCCTTaGGGTCCAAGCCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFGQWHP*GPSLQM
Trigger: CATCTGAAGGCTTGGACCCCAAGGATGCCACTGACC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGACAGTTTTATAAACTaGGTCAGTGGCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVDSFIN*VSGILG
Trigger: CCCAAGGATGCCACTGACCCAGTTTATAAAACTGTC...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGCTACTGAGAGAAGCTaGTGGCAGTCTAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYATERS*WQSREA
Trigger: AGCCTCTCTAGACTGCCACCAGCTTCTCTCAGTAGC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAATGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQCRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTAGACCTACATTGCATTaGTGCTACAGATCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIRPTLH*CYRSSH
Trigger: GTGACTTGATCTGTAGCACCAATGCAATGTAGGTCT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCCAGTCTCTATTTGTTaGATCTATACTTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLPVSIC*IYTFSY
Trigger: GTAACTGAAAGTATAGATCCAACAAATAGAGACTGG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTGAAGTAAACCCCTTTTaGCTCCAAGTTGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIEVNPF*LQVDLG
Trigger: ACCCAGATCAACTTGGAGCCAAAAGGGGTTTACTTC...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCAACTAAATCCTATGTaGACACATACGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCQLNPM*THTDSH
Trigger: ATGGCTGTCCGTATGTGTCCACATAGGATTTAGTTG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTCCATCTGGATGACTaGTTTCCACAGTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: GGLECKDDATEIVSSVCFFHLDD*FPQCRL
Trigger: TAAACGGCACTGTGGAAATCAGTCATCCAGATGGAA...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGCTATTAAATGCATTATaGGACGCTCAGGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRLLNAL*DAQVLP
Trigger: AGGCAACACCTGAGCGTCTCATAATGCATTTAATAG...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAACCATTCCAATAGTTTaGTCCCAACATCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVTIPIV*SQHPKD
Trigger: GTCCTTTGGATGTTGGGATCAAACTATTGGAATGGT...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTACCATTCCAATAGTTTaGTCCCAACATCCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVTIPIV*SQHPKD
Trigger: GTCCTTTGGATGTTGGGATCAAACTATTGGAATGGT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTTCAATAACCGGAGATaGCCATTCATCTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEFNNRR*PFIFVS
Trigger: AGATACAAAGATGAATGGTCATCTCCGGTTATTGAA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATACCACGTTTCAGTCCTaGATCAGCAGCTTTGCTACC +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYTTFQS*ISSFAT
Trigger: GGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGCAATTTTGGGAATATaGGGAACACCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCAILGI*GTPDFS
Trigger: AGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGCTAATTTGGAGAACTaGTCTGGAAGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWANLEN*SGSLLC
Trigger: ACAGAGAAGACTTCCAGATCAGTTCTCCAAATTAGC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATTTGCAAACATGGAATTaGAGTTCTTACATTCTCGAC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNLQTWN*SSYILD
Trigger: GTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAA...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTTGCAAACATGGAATTaGAGTTCTTACATTCTCGAC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVLQTWN*SSYILD
Trigger: GTCGAGAATGTAAGAACTTCAATTCCATGTTTGCAA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTATGTCATATCTTTCTTaGCAACAGGGAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCMSYLS*QQGRVE
Trigger: TTCCACTCTTCCCTGTTGTCAAGAAAGATATGACAT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAGTTGTTTGGCCAGCTaGCCTCATAGGCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFSCLAS*PHRHWR
Trigger: TCTCCAGTGCCTATGAGGTCAGCTGGCCAAACAACT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAAGAGTGCCATACCCATaGGGCTGGAAAAGTATGTCC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPRVPYP*GWKSMS
Trigger: GGACATACTTTTCCAGCCTCATGGGTATGGCACTCT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTAATGCAGGGAGCTGGTaGATAAACTCCAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGNAGSW*INSSNC
Trigger: ACAATTGCTGGAGTTTATGCACCAGCTCCCTGCATT...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGCATGAGTCAAGCTCTTaGCCATCTTCAAGAATAATA +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEHESSS*PSSRII
Trigger: TATTATTCTTGAAGATGGGCAAGAGCTTGACTCATG...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTATTCCATGCATGTACTaGTTATCCAGAGTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIIPCMY*LSRVGV
Trigger: TACTCCCACTCTGGATAAGCAGTACATGCATGGAAT...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR GCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTTCTCCACTTAGCCTTTaGAGCACAGGCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVSPLSL*STGNIQ
Trigger: TTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGA...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGGTCTTCACAGTAAGTaGAAGATGAGTATTATTCCT +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNGLHSK*KMSIIP
Trigger: AGGAATAATACTCATCTTGCACTTACTGTGAAGACC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGGTCTTCACAGTAAGTaGAAGATGAGTATTATTCCT +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGGLHSK*KMSIIP
Trigger: AGGAATAATACTCATCTTGCACTTACTGTGAAGACC...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGCAGGAGATCAGGGCTaGTGGATGAGAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKAGDQG*WMRVFQ
Trigger: CTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGAGAATATGTGTCGGATaGACCGGTCAAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRRICVG*TGQTKF
Trigger: GAATTTGGTTTGACCGGTGCATCCGACACATATTCT...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGAGTCTTGCTACAGATaGCAGGTTCAAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEESCYR*QVQATY
Trigger: ATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGACTGGAAAGATACTaGTTCACCTTCCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQRLERY*FTFLAI
Trigger: AATGGCAAGGAAGGTGAAGCAGTATCTTTCCAGTCT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAAGACTGGAAAGATACTaGTTCACCTTCCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVRLERY*FTFLAI
Trigger: AATGGCAAGGAAGGTGAAGCAGTATCTTTCCAGTCT...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAGGCTTCCTTTACACTaGCCACAAGTTCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIRLPLH*PQVLEQ
Trigger: CTGCTCTAGAACTTGTGGGCAGTGTAAAGGAAGCCT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCACTAGAGAGGCTGTTATaGATCATCTTTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQALERLL*IIFDLC
Trigger: GCAGAGGTCAAAGATGATGCATAACAGCCTCTCTAG...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAAGGCAGTTCCGGCGTaGAAAGTGGAGACTGGTATC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPKAVPA*KVETGI
Trigger: GATACCAGTCTCCACTTTGCACGCCGGAACTGCCTT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATCCCACAAAATGTTACTaGAGCCAGCTGAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYPTKCY*SQLRAA
Trigger: TGCAGCTCTCAGCTGGCTGCAGTAACATTTTGTGGG...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACACATGAGTCACCTGTaGATGAGGGTTTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIHMSHL*MRVFCE
Trigger: CTCACAGAAAACCCTCATCCACAGGTGACTCATGTG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTATCAACAGGTCCTTCTaGAAGACGTGTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVINRSF*KTCQIY
Trigger: GTAGATTTGACACGTCTTCCAGAAGGACCTGTTGAT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTATCAACAGGTCCTTCTaGAAGACGTGTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIINRSF*KTCQIY
Trigger: GTAGATTTGACACGTCTTCCAGAAGGACCTGTTGAT...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509018.6
CDS-3UTR CCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTC +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPISPLQ*ICSINL
Trigger: GAGATTGATCGAACAGATCCATTGCAGGGGCGAGAT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGCTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLLSSCD*LRPPSL
Trigger: TAGTGATGGAGGCCTAAGCCAATCACAAGATGACAG...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTACCCAGAATGTCTCTTaGTTTACAATGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETITQNVS*FTMSSN
Trigger: GTTTGAGGACATTGTAAACCAAGAGACATTCTGGGT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTACCCAGAATGTCTCTTaGTTTACAATGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCTQNVS*FTMSSN
Trigger: GTTTGAGGACATTGTAAACCAAGAGACATTCTGGGT...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGAAGAGTGGAATAATTaGAGGCTGCATACTTTGACT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIEEWNN*RLHTLT
Trigger: AGTCAAAGTATGCAGCCTCCAATTATTCCACTCTTC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGTCATTCGAACAACTTaGCGGATTTCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQVIRTT*RISLEI
Trigger: GATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGAC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAACCTTCCTTGCCATTTaGGCATCCTCATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQTFLAI*ASSYSF
Trigger: GAAGCTATATGAGGATGCCCAAATGGCAAGGAAGGT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGATCTCACTTAAATTCTTaGTCAAGGTACCATATGCAG +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGSHLNS*SRYHMQ
Trigger: CTGCATATGGTACCTTGACCAAGAATTTAAGTGAGA...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGTGCAAATTAACAGCTaGCACCTGAAGCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPVQINS*HLKHLA
Trigger: AGCCAGGTGCTTCAGGTGCCAGCTGTTAATTTGCAC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAAATCTCACTATGGCTaGAGTCAGACAAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQKSHYG*SQTSCQ
Trigger: CTGACAACTTGTCTGACTCCAGCCATAGTGAGATTT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGAAGAAATCTCACTATaGCTGGAGTCAGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWEEISL*LESDKL
Trigger: CAACTTGTCTGACTCCAGCCATAGTGAGATTTCTTC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGAAGAAATCTCACTATaGCTGGAGTCAGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQEEISL*LESDKL
Trigger: CAACTTGTCTGACTCCAGCCATAGTGAGATTTCTTC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAATTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKFPMPQ*IQGLPG
Trigger: CCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAA...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATACTTTGGAAGTTGTCATaGGAGCTGCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQILWKLS*ELLEHE
Trigger: TTCGTGTTCAAGCAGCTCCCATGACAACTTCCAAAG...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGGGTTTGGAAGGCTTTaGAAGTTGTCATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALGFGRL*KLSWEL
Trigger: CAGCTCCCATGACAACTTCCAAAGCCTTCCAAACCC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGTTCAACTTCAGCAATaGGGTCATCCAAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVVQLQQ*GHPNGY
Trigger: ATACCCATTTGGATGACCCCATTGCTGAAGTTGAAC...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAAACTGTCCCATAGTTTaGTTCATACGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVNCPIV*FIRVRQ
Trigger: CTGTCTGACACGTATGAACCAAACTATGGGACAGTT...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCATATAAACTGGGTCAGTaGCATCCTTGGGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPYKLGQ*HPWGPS
Trigger: GCTTGGACCCCAAGGATGCCACTGACCCAGTTTATA...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGACAGTTTTATAAACTaGGTCAGTGGCATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEDSFIN*VSGILG
Trigger: CCCAAGGATGCCACTGACCCAGTTTATAAAACTGTC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAAGTTACAATCTTCGATaGAACACAGGCCACGAGGTT +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQASYNLR*NTGHEV
Trigger: AACCTCGTGGCCTGTGTTCCATCGAAGATTGTAACT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAAGTTACAATCTTCGATaGAACACAGGCCACGAGGTT +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQISYNLR*NTGHEV
Trigger: AACCTCGTGGCCTGTGTTCCATCGAAGATTGTAACT...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGAGTTACAATCTTCGATaGAACACAGGCCACGAGGTT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLSYNLR*NTGHEV
Trigger: AACCTCGTGGCCTGTGTTCCATCGAAGATTGTAACT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATATGCAGAATCATGAGGTaGTTCTTGCCCATTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSICRIMR*FLPIPP
Trigger: TGGAGGAATGGGCAAGAACCACCTCATGATTCTGCA...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGTGCAAAGTGGAGACTaGTATCCAGGCATAGCATCC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPVQSGD*YPGIAS
Trigger: GGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTCTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp AAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATaGCATTGGTGCTACAGATCAAGTCACATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KGLPISLKLRPT*HWCYRSSHISV
Trigger: CACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQFKNHH*AEFSPY
Trigger: GTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTATTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVFKNHH*AEFSPY
Trigger: GTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAA...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGCAATTTTGGGAATATaGGGAACACCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVAILGI*GTPDFS
Trigger: AGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGC...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGCTAATTTGGAGAACTaGTCTGGAAGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEANLEN*SGSLLC
Trigger: ACAGAGAAGACTTCCAGATCAGTTCTCCAAATTAGC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGCTAATTTGGAGAACTaGTCTGGAAGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLANLEN*SGSLLC
Trigger: ACAGAGAAGACTTCCAGATCAGTTCTCCAAATTAGC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAAACATCCAGCATGTTTaGATTTGTGCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVNIQHV*ICASLT
Trigger: AGTCAAGGAAGCACAAATTCAAACATGCTGGATGTT...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAATTAACAGCTGGCACCTaGAGCACCTGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKLTAGT*STWLTL
Trigger: CAGAGTAAGCCAGGTGCTTCAGGTGCCAGCTGTTAA...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQRQLNT*LEMASR
Trigger: TCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGCCCTTTTCTGTACTTaGAGTGACAGTTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIALFCT*SDSFIN
Trigger: GTTTATAAAACTGTCACTTCAAGTACAGAAAAGGGC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGCCCTTTTCTGTACTTaGAGTGACAGTTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCALFCT*SDSFIN
Trigger: GTTTATAAAACTGTCACTTCAAGTACAGAAAAGGGC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGCTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTACTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTCAAGGGCTAAAAACTaGGAACCAAGAGACAATCAT +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWSRAKN*EPRDNH
Trigger: ATGATTGTCTCTTGGTTCTCAGTTTTTAGCCCTTGA...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGTGTGATCAGCTGATCTaGACACTCACAGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPECDQLI*TLTVKA
Trigger: AGCTTTAACTGTGAGTGTTCAGATCAGCTGATCACA...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGATCAATGTGATCAGCTaGTCTGAACACTCACAGTTA +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQINVIS*SEHSQL
Trigger: TAACTGTGAGTGTTCAGATCAGCTGATCACATTGAT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAAAAGAGAACCTGATTaGCACTGTATCTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQKREPD*HCISHS
Trigger: GCTATGAGAGATACAGTGGCAATCAGGTTCTCTTTT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGGGTTTTCTGTGAGATaGATCTTGGTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLGFSVR*ILVRSA
Trigger: AGCTGATCTTACCAAGATGCATCTCACAGAAAACCC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCGGGTTTTCTGTGAGATaGATCTTGGTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: GGLECKDDATEIVSSVCFGFSVR*ILVRSA
Trigger: AGCTGATCTTACCAAGATGCATCTCACAGAAAACCC...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCA +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPTRSRP*NGSVRS
Trigger: TGATCGAACAGATCCATTGCAGGGGCGAGATCTTGT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGATCATCAGTTTTGTCTaGAGGTTCTTTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEIISFV*RFFFKT
Trigger: TGTCTTGAAAAAGAACCTGCAGACAAAACTGATGAT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAATCATCAGTTTTGTCTaGAGGTTCTTTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGIISFV*RFFFKT
Trigger: TGTCTTGAAAAAGAACCTGCAGACAAAACTGATGAT...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGATAATAGCTCCAGCCTaGTCTACCACTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRIIAPA*STTSKI
Trigger: GATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTAT...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAGTCCTGACAATTCCATaGATGTACTGCTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAVLTIP*MYCLSR
Trigger: TCTGGATAAGCAGTACATGCATGGAATTGTCAGGAC...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTGTCCTGACAATTCCATaGATGTACTGCTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGVLTIP*MYCLSR
Trigger: TCTGGATAAGCAGTACATGCATGGAATTGTCAGGAC...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTCTCCACTTAGCCTTTaGAGCACAGGCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: GGLECKDDATEIVSSVCFSPLSL*STGNIQ
Trigger: TTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGA...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSILNQQL*YQVLLL
Trigger: AAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGGTCTTCACAGTAAGTaGAAGATGAGTATTATTCCT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIGLHSK*KMSIIP
Trigger: AGGAATAATACTCATCTTGCACTTACTGTGAAGACC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAAGAATATGTGTCGGATaGACCGGTCAAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQARICVG*TGQTKF
Trigger: GAATTTGGTTTGACCGGTGCATCCGACACATATTCT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGAGTCTTGCTACAGATaGCAGGTTCAAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIESCYR*QVQATY
Trigger: ATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCGAGTCTTGCTACAGATaGCAGGTTCAAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPESCYR*QVQATY
Trigger: ATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTC...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCACTGCTTCACCTTCCTTaGCATTTGGGCATCCTCATA +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPLLHLP*HLGILI
Trigger: TATGAGGATGCCCAAATGGCAAGGAAGGTGAAGCAG...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACTCTGTCTTTTCCAATaGCCCAGTGGATTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPLCLFQ*PSGFRD
Trigger: GTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGAGAAATCTCTTCATTaGTCACAGACGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLEKSLH*SQTMRQ
Trigger: CTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGAGAAATCTCTTCATTaGTCACAGACGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIEKSLH*SQTMRQ
Trigger: CTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAACGACCACTGTCAGCTaGTTCTATAATGATATGCTC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQTTTVS*FYNDML
Trigger: GAGCATATCATTATAGAAGCAGCTGACAGTGGTCGT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCCCACAAAATGTTACTaGAGCCAGCTGAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFPTKCY*SQLRAA
Trigger: TGCAGCTCTCAGCTGGCTGCAGTAACATTTTGTGGG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGCACTGAGCGTTAACTaGTTCAACAGTCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALALSVN*FNSLGR
Trigger: TCTGCCAAGACTGTTGAAGCAGTTAACGCTCAGTGC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGATAGGAGACAAACATTaGTTGTTACAGGATACCTTA +
Preference number: 4 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSIGDKH*LLQDTL
Trigger: TAAGGTATCCTGTAACAAGCAATGTTTGTCTCCTAT...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTATCTTCTATATAAGTTaGATCCACGATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVIFYIS*IHDGMF
Trigger: GAACATTCCATCGTGGATCCAACTTATATAGAAGAT...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGCTGTTCAATATCTCCTaGCACATGCTGGATAGAATG +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPELFNIS*HMLDRM
Trigger: CATTCTATCCAGCATGTGCCAGGAGATATTGAACAG...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTTCTATCAGCTAATTTaGAGAACTGATCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCFYQLI*RTDLEV
Trigger: GACTTCCAGATCAGTTCTCCAAATTAGCTGATAGAA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATGCAGCATGGATAGCTaGCTTTCCTTAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQICSMDS*LSLTSS
Trigger: AGAACTAGTTAAGGAAAGCCAGCTATCCATGCTGCA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATGCAGCATGGATAGCTaGCTTTCCTTAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQACSMDS*LSLTSS
Trigger: AGAACTAGTTAAGGAAAGCCAGCTATCCATGCTGCA...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGACCCAGAATGTCTCTTaGTTTACAATGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQTQNVS*FTMSSN
Trigger: GTTTGAGGACATTGTAAACCAAGAGACATTCTGGGT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGACCCAGAATGTCTCTTaGTTTACAATGTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KLSEVNLYLWCICAVGIRTQNVS*FTMSSN
Trigger: GTTTGAGGACATTGTAAACCAAGAGACATTCTGGGT...CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGAAGAGTGGAATAATTaGAGGCTGCATACTTTGACT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVEEWNN*RLHTLT
Trigger: AGTCAAAGTATGCAGCCTCCAATTATTCCACTCTTC...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCTTGGCGGATTTCCTTaGAAATCATTCTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCLGGFP*KSFLTS
Trigger: AGAAGTTAAGAATGATTTCCAAGGAAATCCGCCAAG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAGTCATTCGAACAACTTaGCGGATTTCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAVIRTT*RISLEI
Trigger: GATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGAC...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGTCATTCGAACAACTTaGCGGATTTCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIVIRTT*RISLEI
Trigger: GATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGAC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAACCTTCCTTGCCATTTaGGCATCCTCATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSITFLAI*ASSYSF
Trigger: GAAGCTATATGAGGATGCCCAAATGGCAAGGAAGGT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCATGGGCTTTAGTTGTTTaGCCAGCTGACCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPWALVV*PADLIG
Trigger: GCCTATGAGGTCAGCTGGCCAAACAACTAAAGCCCA...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACTTTGGAAGTTGTCATaGGAGCTGCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSILWKLS*ELLEHE
Trigger: TTCGTGTTCAAGCAGCTCCCATGACAACTTCCAAAG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGTTCAACTTCAGCAATaGGGTCATCCAAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQVQLQQ*GHPNGY
Trigger: ATACCCATTTGGATGACCCCATTGCTGAAGTTGAAC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAACTGTCCCATAGTTTaGTTCATACGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPENCPIV*FIRVRQ
Trigger: CTGTCTGACACGTATGAACCAAACTATGGGACAGTT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATATAAACTGGGTCAGTaGCATCCTTGGGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNEYKLGQ*HPWGPS
Trigger: GCTTGGACCCCAAGGATGCCACTGACCCAGTTTATA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGAGACCTACATTGCATTaGTGCTACAGATCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLRPTLH*CYRSSH
Trigger: GTGACTTGATCTGTAGCACCAATGCAATGTAGGTCT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCCAGTCTCTATTTGTTaGATCTATACTTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNPVSIC*IYTFSY
Trigger: GTAACTGAAAGTATAGATCCAACAAATAGAGACTGG...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGGACCAAGAAAGCTATaGAACCACCAAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPGPRKL*NHQASF
Trigger: GAATGAGGCTTGGTGGTTCCATAGCTTTCTTGGTCC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGCAAAGCATTTGGCTTTaGCTCCTGATCAATGTGATC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEQSIWL*LLINVI
Trigger: GATCACATTGATCAGGAGCCAAAGCCAAATGCTTTG...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp TTTCTTCAGTTGTTCCTAAAACTTTCTGAGGTAAACTaGTATCTGTGGTGCATCTGTGCTGTGGGTATACGG +
Preference number: 4 (lower is better)
Translates to: FLQLFLKLSEVN*YLWCICAVGIR
Trigger: CCGTATACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAACAACTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGACATTAATCTAAGCTaGTGTTCCCTGAGATTTGAT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVDINLS*CSLRFD
Trigger: ATCAAATCTCAGGGAACATCAGCTTAGATTAATGTC...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGTCTGGCAATCGTTTCTaGACAAAAGAGAACCTGATT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLSGNRF*TKENLI
Trigger: AATCAGGTTCTCTTTTGTTCAGAAACGATTGCCAGA...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIFKNHH*AEFSPY
Trigger: GTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGCAATTTTGGGAATATaGGGAACACCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLAILGI*GTPDFS
Trigger: AGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGC...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTTTGATCAGGGATATCTaGAGGATTGGAAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVLIRDI*RIGKIQ
Trigger: TTGGATTTTTCCAATCCTTCAGATATCCCTGATCAA...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTCCTTAACTAGTTCTTaGGCATCTTCATCTGAACAT +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQSLTSS*ASSSEH
Trigger: ATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAAACATCCAGCATGTTTaGATTTGTGCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQINIQHV*ICASLT
Trigger: AGTCAAGGAAGCACAAATTCAAACATGCTGGATGTT...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGTTGTCAGATTTAGCTaGTGGAATAAGTGTGTAACC +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQVVRFS*WNKCVT
Trigger: GGTTACACACTTATTCCATCAGCTAAATCTGACAAC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGTTGTCAGATTTAGCTaGTGGAATAAGTGTGTAACC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEVVRFS*WNKCVT
Trigger: GGTTACACACTTATTCCATCAGCTAAATCTGACAAC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPMISYP*SVLCLF
Trigger: GAAAAGACAGAGCACGCTTCAGGGATAGGAGATCAT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFMISYP*SVLCLF
Trigger: GAAAAGACAGAGCACGCTTCAGGGATAGGAGATCAT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQRQLNT*LEMASR
Trigger: TCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGCCCTTTTCTGTACTTaGAGTGACAGTTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: QRASYFSQTETYIALVLQALFCT*SDSFIN
Trigger: GTTTATAAAACTGTCACTTCAAGTACAGAAAAGGGC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAACCTTCTTGGGTGAGGTaGCACAGTACACAATCAAGC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKPSWVR*HSTQSS
Trigger: GCTTGATTGTGTACTGTGTCACCTCACCCAAGAAGG...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAACTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATCAAGGGCTAAAAACTaGGAACCAAGAGACAATCAT +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQASRAKN*EPRDNH
Trigger: ATGATTGTCTCTTGGTTCTCAGTTTTTAGCCCTTGA...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCAAAAGTTTGCACTaGGCGTTAACTGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYGKSLH*ALTAST
Trigger: TGTTGAAGCAGTTAACGCTCAGTGCAAACTTTTGCC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAATGCAGGGAGCTGGTaGATAAACTCCAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALNAGSW*INSSNC
Trigger: ACAATTGCTGGAGTTTATGCACCAGCTCCCTGCATT...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALLNQQL*YQVLLL
Trigger: AAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTCTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTT +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLLNQQL*YQVLLL
Trigger: AAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAG...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTGGTCTTCACAGTAAGTaGAAGATGAGTATTATTCCT +
Preference number: 4 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIGLHSK*KMSIIP
Trigger: AGGAATAATACTCATCTTGCACTTACTGTGAAGACC...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTG +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPRLCLQ*LVPTML
Trigger: CAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAGAATATGTGTCGGATaGACCGGTCAAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIRICVG*TGQTKF
Trigger: GAATTTGGTTTGACCGGTGCATCCGACACATATTCT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAGACTGGAAAGATACTaGTTCACCTTCCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIRLERY*FTFLAI
Trigger: AATGGCAAGGAAGGTGAAGCAGTATCTTTCCAGTCT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCACGACCACTGTCAGCTaGTTCTATAATGATATGCTC +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPTTTVS*FYNDML
Trigger: GAGCATATCATTATAGAAGCAGCTGACAGTGGTCGT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAGGCTTCCTTTACACTaGCCACAAGTTCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNERLPLH*PQVLEQ
Trigger: CTGCTCTAGAACTTGTGGGCAGTGTAAAGGAAGCCT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTATTGTTCATTTTCATCTaGTTCGCTATCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVLFIFI*FAICIS
Trigger: ACTGATGCAGATAGCGAAGCAGATGAAAATGAACAA...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGATGTGGGGGAGGCATaGTGCAGAACACTGCATAAA +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKDVGEA*CRTLHK
Trigger: TTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGGCCTCAACACTCTGTaGAAGATATTTACACTATTA +
Preference number: 4 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWGLNTL*KIFTLL
Trigger: TAATAGTGTAAATATCTTGCACAGAGTGTTGAGGCC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAAGGCAGCTGTAAGGTaGAAGTCCAAAACCATAGGC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFKAAVR*KSKTIG
Trigger: GCCTATGGTTTTGGACTTGCACCTTACAGCTGCCTT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTATGGAATTGGAGTAAATaGAGCTTAAGACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QVYFIARSRGNKTSGLVVWNWSK*SLRLLL
Trigger: CAAGAGAAGTCTTAAGCTGCATTTACTCCAATTCCA...TACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAACTTGGTAAGATCAGCTaGAAGAGAAAGATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQLGKIS*KRKIAV
Trigger: AACAGCTATCTTTCTCTTCCAGCTGATCTTACCAAG...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCCTCTCCTTACAGACATaGTCATGTTTGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPLSLQT*SCLQMQ
Trigger: CTGCATTTGCAAACATGACCATGTCTGTAAGGAGAG...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTATCTTCTATATAAGTTaGATCCACGATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIIFYIS*IHDGMF
Trigger: GAACATTCCATCGTGGATCCAACTTATATAGAAGAT...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCACTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTA +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPLSSCD*LRPPSL
Trigger: TAGTGATGGAGGCCTAAGCCAATCACAAGATGACAG...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTTTTGGAGAACTGATCTaGAAGTCTTCTCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: VQSGDWYPGIASIAQETIFGELI*KSSLFY
Trigger: ATAAAACAGAGAAGACTTCCAGATCAGTTCTCCAAA...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGAAGAGTGGAATAATTaGAGGCTGCATACTTTGACT +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEEEWNN*RLHTLT
Trigger: AGTCAAAGTATGCAGCCTCCAATTATTCCACTCTTC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTACCTTCCTTGCCATTTaGGCATCCTCATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLTFLAI*ASSYSF
Trigger: GAAGCTATATGAGGATGCCCAAATGGCAAGGAAGGT...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYVELQT*SQQNNC
Trigger: GCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTAC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAAAAATCCCAGCTTTTTaGGTTTGGAAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAKIPAF*VWKALE
Trigger: TTCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGGTTTTAGGTGTGTGTaGGGTCCTTCCTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKGFRCV*GPSFRS
Trigger: GGACCTAAAGGAAGGACCCCACACACACCTAAAACC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGCAAAATTTCATTCTGTaGAAATTAGGGTTCCCACCC +
Preference number: 4 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEQNFIL*KLGFPP
Trigger: GGGTGGGAACCCTAATTTCCACAGAATGAAATTTTG...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGAAGTAAACCCCTTTTaGCTCCAAGTTGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYEVNPF*LQVDLG
Trigger: ACCCAGATCAACTTGGAGCCAAAAGGGGTTTACTTC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTAAACTACAAAGCATTTaGCTTTGGCTCCTGATCAAT +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVKLQSI*LWLLIN
Trigger: ATTGATCAGGAGCCAAAGCCAAATGCTTTGTAGTTT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGAACAAAAGAGAACCTaGTTGCCACTGTATCTCTCA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYEQKRT*LPLYLS
Trigger: TGAGAGATACAGTGGCAATCAGGTTCTCTTTTGTTC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCACTATTAAATGCATTATaGGACGCTCAGGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPLLNAL*DAQVLP
Trigger: AGGCAACACCTGAGCGTCTCATAATGCATTTAATAG...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCGCAATTTTGGGAATATaGGGAACACCAGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPAILGI*GTPDFS
Trigger: AGAGAAATCTGGTGTTCCTCATATTCCCAAAATTGC...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTTTGATCAGGGATATCTaGAGGATTGGAAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGLIRDI*RIGKIQ
Trigger: TTGGATTTTTCCAATCCTTCAGATATCCCTGATCAA...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTGCTAATTTGGAGAACTaGTCTGGAAGTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLANLEN*SGSLLC
Trigger: ACAGAGAAGACTTCCAGATCAGTTCTCCAAATTAGC...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAATGTCATATCTTTCTTaGCAACAGGGAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIMSYLS*QQGRVE
Trigger: TTCCACTCTTCCCTGTTGTCAAGAAAGATATGACAT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAACATCCAGCATGTTTaGATTTGTGCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSINIQHV*ICASLT
Trigger: AGTCAAGGAAGCACAAATTCAAACATGCTGGATGTT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGCCCTTTTCTGTACTTaGAGTGACAGTTTTATAAAC +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIALFCT*SDSFIN
Trigger: GTTTATAAAACTGTCACTTCAAGTACAGAAAAGGGC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACAAAGGCTAGACTGCTaGAACTTGTTCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIQRLDC*NLFIFI
Trigger: GATGAAAATGAACAAGTTTCAGCAGTCTAGCCTTTG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGGGTTTTCTGTGAGATaGATCTTGGTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALGFSVR*ILVRSA
Trigger: AGCTGATCTTACCAAGATGCATCTCACAGAAAACCC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAATGCAGGGAGCTGGTaGATAAACTCCAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNENAGSW*INSSNC
Trigger: ACAATTGCTGGAGTTTATGCACCAGCTCCCTGCATT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGTCCTGACAATTCCATaGATGTACTGCTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALVLTIP*MYCLSR
Trigger: TCTGGATAAGCAGTACATGCATGGAATTGTCAGGAC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAGGTCTTCACAGTAAGTaGAAGATGAGTATTATTCCT +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAGLHSK*KMSIIP
Trigger: AGGAATAATACTCATCTTGCACTTACTGTGAAGACC...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCATATCTCCTGGCACATaGTGGATAGAATGGCGATTA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALISPGT*WIEWRL
Trigger: TAATCGCCATTCTATCCAGCATGTGCCAGGAGATAT...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAATATCTCCTGGCACATaGTGGATAGAATGGCGATTA +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPISPGT*WIEWRL
Trigger: TAATCGCCATTCTATCCAGCATGTGCCAGGAGATAT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGCCTTGTTCCCACAATaGTGTCATCTTGTGATTGGC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKALFPQ*CHLVIG
Trigger: GCCAATCACAAGATGACAGCATTGTGGGAACAAGGC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAGTTCCTCTGAGTCTTaGTACAGATGCCAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNESSSES*YRCQVQ
Trigger: TTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLACLNL*FLDSVT
Trigger: GGTCACTGAGTCAAGGAAGCACAAATTCAAACATGC...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR GCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGAGAAATCTCTTCATTaGTCACAGACGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPEKSLH*SQTMRQ
Trigger: CTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAAGGCTTCCTTTACACTaGCCACAAGTTCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKRLPLH*PQVLEQ
Trigger: CTGCTCTAGAACTTGTGGGCAGTGTAAAGGAAGCCT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACTAGAGAGGCTGTTATaGATCATCTTTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPLERLL*IIFDLC
Trigger: GCAGAGGTCAAAGATGATGCATAACAGCCTCTCTAG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATTGTTCATTTTCATCTaGTTCGCTATCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQALFIFI*FAICIS
Trigger: ACTGATGCAGATAGCGAAGCAGATGAAAATGAACAA...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATCCTACATTGCATTGGTaGTACAGATCAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYPTLHW*YRSSHI
Trigger: GATGTGACTTGATCTGTAGCACCAATGCAATGTAGG...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTAACTTGTATCTGTGGTaGATCTGTGCTGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLNLYLW*ICAVGI
Trigger: TATACCCACAGCACAGATGCACCACAGATACAAGTT...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAATGCTTCCAGAGTCACTaGCAATGCTACAACCAGACT +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKCFQSH*QCYNQT
Trigger: AGTCTGGTTGTAGCATTGCCAGTGACTCTGGAAGCA...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCACTCTCCTTACAGACATaGTCATGTTTGCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPLSLQT*SCLQMQ
Trigger: CTGCATTTGCAAACATGACCATGTCTGTAAGGAGAG...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTATCTTCTATATAAGTTaGATCCACGATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVIFYIS*IHDGMF
Trigger: GAACATTCCATCGTGGATCCAACTTATATAGAAGAT...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATCTCCTGGCACATGCTaGATAGAATGGCGATTACTT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNESPGTC*IEWRLL
Trigger: AAGTAATCGCCATTCTATCCAGCATGTGCCAGGAGA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATTCTATCAGCTAATTTaGAGAACTGATCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAFYQLI*RTDLEV
Trigger: GACTTCCAGATCAGTTCTCCAAATTAGCTGATAGAA...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATTGCAGCATGGATAGCTaGCTTTCCTTAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYCSMDS*LSLTSS
Trigger: AGAACTAGTTAAGGAAAGCCAGCTATCCATGCTGCA...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCTCGAAACATCATAGCTaGGTCCATGTTAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALSKHHS*VHVSRS
Trigger: ACTTCTGCTAACATGGACCCAGCTATGATGTTTCGA...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATCTCACTTAAATTCTTaGTCAAGGTACCATATGCAG +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQISHLNS*SRYHMQ
Trigger: CTGCATATGGTACCTTGACCAAGAATTTAAGTGAGA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGTCTCACTTAAATTCTTaGTCAAGGTACCATATGCAG +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLSHLNS*SRYHMQ
Trigger: CTGCATATGGTACCTTGACCAAGAATTTAAGTGAGA...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACTTTGGAAGTTGTCATaGGAGCTGCTTGAACACGAA +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPLWKLS*ELLEHE
Trigger: TTCGTGTTCAAGCAGCTCCCATGACAACTTCCAAAG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACCAGCTTTTTGGGTTTaGAAGGCTTTGGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPPAFWV*KALEVV
Trigger: GACAACTTCCAAAGCCTTCCAAACCCAAAAAGCTGG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAAACTGTCCCATAGTTTaGTTCATACGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPNCPIV*FIRVRQ
Trigger: CTGTCTGACACGTATGAACCAAACTATGGGACAGTT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTTCTGGCAATCGTTTCTaGACAAAAGAGAACCTGATT +
Preference number: 4 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLSGNRF*TKENLI
Trigger: AATCAGGTTCTCTTTTGTTCAGAAACGATTGCCAGA...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR TCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALRQLNT*LEMASR
Trigger: TCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCT...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAATCAATGTGATCAGCTaGTCTGAACACTCACAGTTA +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPINVIS*SEHSQL
Trigger: TAACTGTGAGTGTTCAGATCAGCTGATCACATTGAT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCTTTTTCCTCCAAACTaGTTACCAAAACTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALLFPPN*LPKLQG
Trigger: TCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGATCATCAGTTTTGTCTaGAGGTTCTTTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLIISFV*RFFFKT
Trigger: TGTCTTGAAAAAGAACCTGCAGACAAAACTGATGAT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCGGTCTAGTTCCCGATaGTCATGTACCATAACAATT +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFRSSSR*SCTITI
Trigger: AATTGTTATGGTACATGAGCATCGGGAACTAGACCG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTTCTCCACTTAGCCTTTaGAGCACAGGCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFSPLSL*STGNIQ
Trigger: TTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGA...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPACLNL*FLDSVT
Trigger: GGTCACTGAGTCAAGGAAGCACAAATTCAAACATGC...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAGACTGGAAAGATACTaGTTCACCTTCCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFRLERY*FTFLAI
Trigger: AATGGCAAGGAAGGTGAAGCAGTATCTTTCCAGTCT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCACCTACATTGCATTGGTaGTACAGATCAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPPTLHW*YRSSHI
Trigger: GATGTGACTTGATCTGTAGCACCAATGCAATGTAGG...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGGCCTCAACACTCTGTaGAAGATATTTACACTATTA +
Preference number: 4 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIGLNTL*KIFTLL
Trigger: TAATAGTGTAAATATCTTGCACAGAGTGTTGAGGCC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAATCTTCTATATAAGTTaGATCCACGATGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAIFYIS*IHDGMF
Trigger: GAACATTCCATCGTGGATCCAACTTATATAGAAGAT...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTTCTCCTGGCACATGCTaGATAGAATGGCGATTACTT +
Preference number: 4 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSSPGTC*IEWRLL
Trigger: AAGTAATCGCCATTCTATCCAGCATGTGCCAGGAGA...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAACTGTTCAATATCTCCTaGCACATGCTGGATAGAATG +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNELFNIS*HMLDRM
Trigger: CATTCTATCCAGCATGTGCCAGGAGATATTGAACAG...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATTTGGAGAACTGATCTaGAAGTCTTCTCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIFGELI*KSSLFY
Trigger: ATAAAACAGAGAAGACTTCCAGATCAGTTCTCCAAA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGTCATTCGAACAACTTaGCGGATTTCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFVIRTT*RISLEI
Trigger: GATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGAC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATCGAAACATCATAGCTaGGTCCATGTTAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNESKHHS*VHVSRS
Trigger: ACTTCTGCTAACATGGACCCAGCTATGATGTTTCGA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKVELQT*SQQNNC
Trigger: GCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTAC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAACTCCACGACTTTCAGTaGTTTTCAAATAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNELHDFQ*FSNRSS
Trigger: GGATGACCTATTTGAAAACCACTGAAAGTCGTGGAG...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp ATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTaGGATCTATACTTTCAGTTACAATTCGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: IDQNSLEPSLYL*DLYFQLQFDAA
Trigger: TGCTGCATCGAATTGTAACTGAAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAGACATTAATCTAAGCTaGTGTTCCCTGAGATTTGAT +
Preference number: 4 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPDINLS*CSLRFD
Trigger: ATCAAATCTCAGGGAACATCAGCTTAGATTAATGTC...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATCTGGCAATCGTTTCTaGACAAAAGAGAACCTGATT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNESGNRF*TKENLI
Trigger: AATCAGGTTCTCTTTTGTTCAGAAACGATTGCCAGA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR TCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAACATCCAGCATGTTTaGATTTGTGCTTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPNIQHV*ICASLT
Trigger: AGTCAAGGAAGCACAAATTCAAACATGCTGGATGTT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGTTGTCAGATTTAGCTaGTGGAATAAGTGTGTAACC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFVVRFS*WNKCVT
Trigger: GGTTACACACTTATTCCATCAGCTAAATCTGACAAC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFRQLNT*LEMASR
Trigger: TCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCTATTTCTCTCAAACTaGGACCTACATTGCATTGGT +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFLFLSN*DLHCIG
Trigger: ACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCTTGTTCTAGTCATATaGCAAACTAAGAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFLVLVI*QTKRRQ
Trigger: CTGCCTTCTCTTAGTTTGTCATATGACTAGAACAAG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGGGTTTTCTGTGAGATaGATCTTGGTAAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKGFSVR*ILVRSA
Trigger: AGCTGATCTTACCAAGATGCATCTCACAGAAAACCC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTATAATAGCTCCAGCCTaGTCTACCACTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFIIAPA*STTSKI
Trigger: GATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTAT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR GCA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTGAGAAATCTCTTCATTaGTCACAGACGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSEKSLH*SQTMRQ
Trigger: CTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTC...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAACGACCACTGTCAGCTaGTTCTATAATGATATGCTC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKTTTVS*FYNDML
Trigger: GAGCATATCATTATAGAAGCAGCTGACAGTGGTCGT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCTTGGCGGATTTCCTTaGAAATCATTCTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALLGGFP*KSFLTS
Trigger: AGAAGTTAAGAATGATTTCCAAGGAAATCCGCCAAG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCTCTCACTTAAATTCTTaGTCAAGGTACCATATGCAG +
Preference number: 4 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALSHLNS*SRYHMQ
Trigger: CTGCATATGGTACCTTGACCAAGAATTTAAGTGAGA...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGAAGAAATCTCACTATaGCTGGAGTCAGACAAGTTG +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKEEISL*LESDKL
Trigger: CAACTTGTCTGACTCCAGCCATAGTGAGATTTCTTC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAAAATCCCAGCTTTTTaGGTTTGGAAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFKIPAF*VWKALE
Trigger: TTCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAGTTCAACTTCAGCAATaGGGTCATCCAAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKVQLQQ*GHPNGY
Trigger: ATACCCATTTGGATGACCCCATTGCTGAAGTTGAAC...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAACTTCAGCCCAAGCTATaGCTTGGAAATAATAATGCC +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKLQPKL*LGNNNA
Trigger: GGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAG...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATATGGAGATCTGGAATTaGAGTAAATGCAGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYMEIWN*SKCSLR
Trigger: TCTTAAGCTGCATTTACTCCAATTCCAGATCTCCAT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp ACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTaGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATA +
Preference number: 4 (lower is better)
Translates to: TRISLVLADNFN*SFSPSYGLEII
Trigger: TATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
3UTR CAA 72 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTaGTTGGATCTATACTTTCAGTTACAATTCGATGCA +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLY*LDLYFQLQFDA
Trigger: TGCATCGAATTGTAACTGAAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCATTCAATAACCGGAGATaGCCATTCATCTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPFNNRR*PFIFVS
Trigger: AGATACAAAGATGAATGGTCATCTCCGGTTATTGAA...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAATCCTTAACTAGTTCTTaGGCATCTTCATCTGAACAT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNESLTSS*ASSSEH
Trigger: ATGTTCAGATGAAGATGCTCAAGAACTAGTTAAGGA...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAATGTCATATCTTTCTTaGCAACAGGGAAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKMSYLS*QQGRVE
Trigger: TTCCACTCTTCCCTGTTGTCAAGAAAGATATGACAT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAGTTTCTGTCTTTTGCTaGTTAGCTTACATGTCTCAA +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPVSVFC*LAYMSQ
Trigger: TTGAGACATGTAAGCTAATCAGCAAAAGACAGAAAC...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAACTTTTTCCTCCAAACTaGTTACCAAAACTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKLFPPN*LPKLQG
Trigger: TCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAG...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAGGATATACCAACATCTaGCAATCGTTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: YTRISLVLADNFNLSFSPGYTNI*QSFLNK
Trigger: TTTGTTCAGAAACGATTGCCAGATGTTGGTATATCC...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CCA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTGGATATCTGAAGGATTaGAAAAATCCAACATACTGG +
Preference number: 4 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFGYLKD*KNPTYW
Trigger: CCAGTATGTTGGATTTTTCCAATCCTTCAGATATCC...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATTTTGGAGAACTGATCTaGAAGTCTTCTCTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: RISLVLADNFNLSFSPSYFGELI*KSSLFY
Trigger: ATAAAACAGAGAAGACTTCCAGATCAGTTCTCCAAA...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAACTTGGCGGATTTCCTTaGAAATCATTCTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: PGIASIAQETIYLQKLNELGGFP*KSFLTS
Trigger: AGAAGTTAAGAATGATTTCCAAGGAAATCCGCCAAG...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAAAAATCCCAGCTTTTTaGGTTTGGAAGGCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKKIPAF*VWKALE
Trigger: TTCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR TCA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTGTTTCTGTCTTTTGCTaGTTAGCTTACATGTCTCAA +
Preference number: 4 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSVSVFC*LAYMSQ
Trigger: TTGAGACATGTAAGCTAATCAGCAAAAGACAGAAAC...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR GCA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAAAGGCATAGCATCCATTaGTCAGGAAACTATTTATCT +
Preference number: 4 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKRHSIH*SGNYLS
Trigger: AGATAAATAGTTTCCTGAGCAATGGATGCTATGCCT...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp GGGTGGCTTCTTCCTCAACGCCTGCCTAGCGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCGGGTACTCCGCAGCCTGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: GWLLPQRLPSARVHG*VHGHGPGTPQPALS
Trigger: GCTAAGGGCAGGCTGCGGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAAGCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 90 bp TTTAAGTCCTCGGGAGTCCGCTCGGGTGGCTTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACGGGTGAGTTCATGGCCACGGCCCGG +
Preference number: 5 (lower is better)
Translates to: FKSSGVRSGGFFLNA*LAPGSTGEFMATAR
Trigger: CCGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCCGAGGACTTAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCCTCGCGGGAAGCCTTTaGCAGCACAACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCLAGSL*QHNLSP
Trigger: TGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAG...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS CCA 90 bp GATCTCCTATCCCTGAAGCGTGCTCTGTCTTTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGGCCTGAGAGGAACACCGTTCATCCT +
Preference number: 5 (lower is better)
Translates to: DLLSLKRALSFPMPQ*IQGLPGPERNTVHP
Trigger: AGGATGAACGGTGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAGCACGCTTCAGGGATAGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 90 bp TCTGGTCCTGGAGGCCACCCACGCTTTGAAGATATGGCAAGAGTCTaGACCACGACAAGTCCATCCTCAGCCGAATCTCTGAACCAGGGT +
Preference number: 5 (lower is better)
Translates to: SGPGGHPRFEDMARV*TTTSPSSAESLNQG
Trigger: ACCCTGGTTCAGAGATTCGGCTGAGGATGGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCGCTCAGGTGTTGCCTaGATCACAATGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASRSGVA*ITMCPF
Trigger: GAAAGGACACATTGTGATCAAGGCAACACCTGAGCG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGCTCGCGGGAAGCCTTTaGCAGCACAACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRLAGSL*QHNLSP
Trigger: TGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAG...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS TCA 90 bp CAAGAGTGTCCACCCAGGGCCATGTTGACTATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTCCAATGCCCCAGTGGATTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QECPPRAMLTMISYP*SVLCLFQCPSGFRD
Trigger: GTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAGCACGCTTCAGGGATAGGAGATCATAGTCAACATGGCCCTGGGTGGACACTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp CCAACAGCTGAAGGATTGGAAAAATCCAACATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTGGATGAGAGTGTTCCAGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: PTAEGLEKSNILVVG*RRSGLLDESVPGMG
Trigger: GCCCATCCCTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTATGTTGGATTTTTCCAATCCTTCAGCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504919.1
ENST00000507093.5
CDS CCA 90 bp AAAAGCATTCCTCTGGTCCTGGAGGCCACCCACGCTTTGAAGATATaGCAAGAGTCTGGACCACGACAAGTCCATCCTCAGCCGAATCTC +
Preference number: 5 (lower is better)
Translates to: KSIPLVLEATHALKI*QESGPRQVHPQPNL
Trigger: GAGATTCGGCTGAGGATGGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGAGGAATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS-3UTR CAA 90 bp ACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGGCCAGACATGGTCATGTTaGCAAATGCAGGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TCICGASVLWVYGKRLQGQTWSC*QMQGAG
Trigger: ACCAGCTCCCTGCATTTGCAAACATGACCATGTCTG...GCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCGCTTACTCTGTGGGGTaGATGCAAGTGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCAYSVG*MQVGFS
Trigger: ACTAAAGCCCACTTGCATCAACCCCACAGAGTAAGC...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCTTACTCTGTGGGGTaGATGCAAGTGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQAYSVG*MQVGFS
Trigger: ACTAAAGCCCACTTGCATCAACCCCACAGAGTAAGC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGAGTCAACAGAACAATaGCTCACGATGCTGGACCGT +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQESTEQ*LTMLDR
Trigger: ACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACTC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS GCA 90 bp CCTCCATTAAGGCTGAATTGTAGAGGGGACTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCACTTAGCCTTTGCAGCACAGGCAATA +
Preference number: 5 (lower is better)
Translates to: PPLRLNCRGDSREAF*STTCLHLAFAAQAI
Trigger: TATTGCCTGTGCTGCAAAGGCTAAGTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAGTCCCCTCTACAATTCAGCCTTAATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp GGGATATCTGAAGGATTGGAAAAATCCAACATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTGGATGAGAGTGTTCCAGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: GISEGLEKSNILVVG*RRSGLLDESVPGMG
Trigger: GCCCATCCCTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTATGTTGGATTTTTCCAATCCTTCAGATATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp CTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTaGAGGGCTGCCAGTCCAGCCCTTTTCAAGAGCACTAAATTCACA +
Preference number: 5 (lower is better)
Translates to: LVSVVHLCCGYTGRG*RAASPALFKSTKFT
Trigger: TGTGAATTTAGTGCTCTTGAAAAGGGCTGGACTGGCAGCCCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS CCA 90 bp CCAGGGCCTGAGAGGAACACCGTTCATCCTGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGCTCACGATGCTGGACCGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: PGPERNTVHPVELQT*SQQNNCSRCWTVKK
Trigger: TTTCTTCACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTACAGGATGAACGGTGTTCCTCTCAGGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTCCACCCAGGGCCATGTaGACTATGATCTCCTATCCC +
Preference number: 5 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLPPRAM*TMISYP
Trigger: GGGATAGGAGATCATAGTCAACATGGCCCTGGGTGG...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGTGTTATGCATCATCTTaGACCTCTGCACTGCCACAC +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQCYASS*TSALPH
Trigger: GTGTGGCAGTGCAGAGGTCAAAGATGATGCATAACA...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 5 (lower is better)
Translates to: RRAKWRLVSRHSIHCSGNIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...GTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGAGACCTACATTGCATaGGTGCTACAGATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASETYIA*VLQIKS
Trigger: TGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS CCA 90 bp GAATGGCTGCAAATTATGCCTCTGAGGCTGAGTTACAATCTTCGATaGAACACAGGCCACGAGGTTGCTACTGAGAGAAGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EWLQIMPLRLSYNLR*NTGHEVATERSWWQ
Trigger: CTGCCACCAGCTTCTCTCAGTAGCAACCTCGTGGCCTGTGTTCCATCGAAGATTGTAACTCAGCCTCAGAGGCATAATTTGCAGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000512611.5
ENST00000671916.1
CDS-3UTR CAA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTCAGACATGGTCATGTTaGCAAATGCAGGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTQTWSC*QMQGAG
Trigger: ACCAGCTCCCTGCATTTGCAAACATGACCATGTCTG...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCGCTTACTCTGTGGGGTaGATGCAAGTGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGAYSVG*MQVGFS
Trigger: ACTAAAGCCCACTTGCATCAACCCCACAGAGTAAGC...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCTGGAGTCAGACAAGTaGTCAGATTTAGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQLESDK*SDLADG
Trigger: TCCATCAGCTAAATCTGACAACTTGTCTGACTCCAG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGGGTCAGTGGCATCCTaGGGGTCCAAGCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCGSVAS*GSKPSD
Trigger: ATCTGAAGGCTTGGACCCCAAGGATGCCACTGACCC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 5 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCTGTGGCAGCTTCATTaGGCCTTCCACACCATGACC +
Preference number: 5 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNLWQLH*AFHTMT
Trigger: GGTCATGGTGTGGAAGGCCAAATGAAGCTGCCACAG...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGCCTTTTGGCTCCAAGTaGATCTGGGTAGTGCACGTT +
Preference number: 5 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLPFGSK*IWVVHV
Trigger: AACGTGCACTACCCAGATCAACTTGGAGCCAAAAGG...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp TTTATAAACTGGGTCAGTGGCATCCTTGGGGTCCAAGCCTTCAGATaGCTCAGCTGGGGTGCTCTCCAATACTCTCTGTTTAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: FINWVSGILGVQAFR*LSWGALQYSLFNCP
Trigger: GGGACAGTTAAACAGAGAGTATTGGAGAGCACCCCAGCTGAGTCATCTGAAGGCTTGGACCCCAAGGATGCCACTGACCCAGTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp GAGAGTGTTCCAGGGATGGGCATTATAGCCAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTGTCATCTTGTGATTGGCTTAGGCCT +
Preference number: 5 (lower is better)
Translates to: ESVPGMGIIARLCLQ*LVPTMLSSCDWLRP
Trigger: AGGCCTAAGCCAATCACAAGATGACAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCTGGCTATAATGCCCATCCCTGGAACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504919.1
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp AAATTACCTGAAGGATTGGAAAAATCCAACATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTGGATGAGAGTGTTCCAGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: KLPEGLEKSNILVVG*RRSGLLDESVPGMG
Trigger: GCCCATCCCTGGAACACTCTCATCCAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTATGTTGGATTTTTCCAATCCTTCAGGTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514179.5
CDS-3UTR CAA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTCAGACATGGTCATGTTaGCAAATGCAGGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLQTWSC*QMQGAG
Trigger: ACCAGCTCCCTGCATTTGCAAACATGACCATGTCTG...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp TTGCAAGTAAGCCCCACCTATTCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTAACCATTCCAATAGTTaGATCCCAACATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LQVSPTYSGAALATDLAANHSNS*IPTSKG
Trigger: TCCTTTGGATGTTGGGATCAAACTATTGGAATGGTT...AGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGAATAGGTGGGGCTTACTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGCTCGCGGGAAGCCTTTaGCAGCACAACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QRASYFSQTETYIALVLQLAGSL*QHNLSP
Trigger: TGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAG...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTCCTGAATCAGCAGCTTaGCTACCAGGTTCTACTCCT +
Preference number: 5 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLPESAA*LPGSTP
Trigger: AGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAGG...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGTATGTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGGAACATCCAGCATGTTaGAATTTGTGCTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GMSGQTQPGAMRCGGGMLEHPAC*NLCFLD
Trigger: GTCAAGGAAGCACAAATTCAAACATGCTGGATGTTC...CAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGACATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGAGACAGCTAAACACTaGATTAGAGATGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQETAKH*IRDGFK
Trigger: CTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCAAAAATCCCAGCTTTTaGGGTTTGGAAGGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCKNPSF*GLEGFG
Trigger: TCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTTT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGGGTCAGTGGCATCCTaGGGGTCCAAGCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWGSVAS*GSKPSD
Trigger: ATCTGAAGGCTTGGACCCCAAGGATGCCACTGACCC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCAGACAATTTCAATTaGTCCTTCAGCCCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQADNFN*SFSPSY
Trigger: ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGAACCCAGTCTCTATTaGTTGGATCTATACTTTCAG +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASEPSLY*LDLYFQ
Trigger: CTGAAAGTATAGATCCAACAAATAGAGACTGGGTTC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCGGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCCTTTCTGAGGTAAACTaGTATCTGTGGTGCATCTGT +
Preference number: 5 (lower is better)
Translates to: SGAALATDLAAVIRYDTALSEVN*YLWCIC
Trigger: ACAGATGCACCACAGATACAAGTTTACCTCAGAAAG...GGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCCAAACTACAAAGCATTaGGCTTTGGCTCCTGATCAA +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCQTTKH*ALAPDQ
Trigger: TTGATCAGGAGCCAAAGCCAAATGCTTTGTAGTTTG...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGCAAACTACAAAGCATTaGGCTTTGGCTCCTGATCAA +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQQTTKH*ALAPDQ
Trigger: TTGATCAGGAGCCAAAGCCAAATGCTTTGTAGTTTG...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCAACAGTCTTGGCAGATaGAGAGTTGTGGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGNSLGR*RVVAGR
Trigger: TCTTCCTGCCACAACTCTCAATCTGCCAAGACTGTT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS GCA 90 bp TGGCCCCCTGAGTGGCATATTCCATCAGGCCTGTGTTTGTGCCTATaGAACCTATGGCACAACAGTAACAAGAAAAAGCATTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: WPPEWHIPSGLCLCL*NLWHNSNKKKHSSG
Trigger: ACCAGAGGAATGCTTTTTCTTGTTACTGTTGTGCCATAGGTTGCATAGGCACAAACACAGGCCTGATGGAATATGCCACTCAGGGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 90 bp GTCGGTTCAATATTACGAAACAAATCAAAGTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTACTGAGCTGCAGCATGGATAGCTGG +
Preference number: 5 (lower is better)
Translates to: VGSILRNKSKSLIDS*VATSMVLSCSMDSW
Trigger: CCAGCTATCCATGCTGCAGCTCAGTACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGATTTGTTTCGTAATATTGAACCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCATCATCAGTAATGGTTaGGCGCTCTCCTTTATAGTT +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCIISNG*ALSFIV
Trigger: AACTATAAAGGAGAGCGCCAAACCATTACTGATGAT...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCCATAAACTCCAGCAATaGTTCAATGTCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASHKLQQ*FNVIIS
Trigger: ACTGATGATGACATTGAACAATTGCTGGAGTTTATG...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTCGCTCAGGTGTTGCCTaGATCACAATGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVRSGVA*ITMCPF
Trigger: GAAAGGACACATTGTGATCAAGGCAACACCTGAGCG...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGCCTGAATCAGCAGCTTaGCTACCAGGTTCTACTCCT +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEPESAA*LPGSTP
Trigger: AGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAGG...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGACCTGAATCAGCAGCTTaGCTACCAGGTTCTACTCCT +
Preference number: 5 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGPESAA*LPGSTP
Trigger: AGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAGG...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCAGATGTTTCTCGTATTaGCTTGGTAACTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASRCFSY*LGNFSQ
Trigger: TTGGGAAAAGTTACCAAGCAAATACGAGAAACATCT...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCGACATTTCAGATGATTaGGCTGATCTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: SQGSSGVQSGDWYPGIASDISDD*ADLFSL
Trigger: AAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTC...GGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATGCTTACTCTGTGGGGTaGATGCAAGTGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNAYSVG*MQVGFS
Trigger: ACTAAAGCCCACTTGCATCAACCCCACAGAGTAAGC...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGCTGTAAGGTGCAAGTCCAAAACCATAGGCCTCAACACTCTGTGCAAGATATTTTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: SCKVQVQNHRPQHSVQDIFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...AATATCTTGCACAGAGTGTTGAGGCCTATGGTTTTGGACTTGCACCTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATTGGGTTTGGAAGGCTTaGGAAGTTGTCATGGGAGCT +
Preference number: 5 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNWVWKA*EVVMGA
Trigger: AGCTCCCATGACAACTTCCAAAGCCTTCCAAACCCA...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATAGGGTCAGTGGCATCCTaGGGGTCCAAGCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIGSVAS*GSKPSD
Trigger: ATCTGAAGGCTTGGACCCCAAGGATGCCACTGACCC...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGTACCTATCGTCCTTCTaGGGTGAGGTGACACAGTAC +
Preference number: 5 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSYLSSF*GEVTQY
Trigger: GTACTGTGTCACCTCACCCAAGAAGGACGATAGGTA...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGACACAGGCCACGAGGTaGCTACTGAGAGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWTQATR*LLREAG
Trigger: ACCAGCTTCTCTCAGTAGCAACCTCGTGGCCTGTGT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCGGAGACAAACATTGCTaGTTACAGGATACCTTACAA +
Preference number: 5 (lower is better)
Translates to: RQFRRAKWRLVSRHSIHCGDKHC*LQDTLQ
Trigger: TTGTAAGGTATCCTGTAACAAGCAATGTTTGTCTCC...GCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS CCA 90 bp AGCTGGGGTGCTCTCCAATACTCTCTGTTTAACTGTCCCATAGTTTaGTTCATACGTGTCAGACAGAGAACTGGAGGAGGTCCAACTCTT +
Preference number: 5 (lower is better)
Translates to: SWGALQYSLFNCPIV*FIRVRQRTGGGPTL
Trigger: AAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACACGTATGAACCAAACTATGGGACAGTTAAACAGAGAGTATTGGAGAGCACCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAAATCTTCTTCGGGATaGTCTGGCAGGAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLKSSSG*SGRNFS
Trigger: AGAGAAATTCCTGCCAGACAATCCCGAAGAAGATTT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp AAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTATACGGGAAGAGGCTGCAGGAAATCTTCTTCGGGATaGTCTGGCAGGAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: KLVSVVHLCCGYTGRGCRKSSSG*SGRNFS
Trigger: AGAGAAATTCCTGCCAGACAATCCCGAAGAAGATTT...CCTGCAGCCTCTTCCCGTATACCCACAGCACAGATGCACCACAGATACAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp CTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAGCCTTGAGGTCCTCATATAGCTTCTaGGCATTAAGCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LAAVIRYDTANFVRGALRSSYSF*ALSREL
Trigger: CAGCTCTCTGCTTAATGCCAAGAAGCTATATGAGGA...CCTCAAGGCTCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp TGTAACTGTGGTCCCAAGGCAGTTCCGGCGTGCAAAGTGGAGACTGGTATCCAGGACATTTCAGATGATTaGGCTGATCTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: CNCGPKAVPACKVETGIQDISDD*ADLFSL
Trigger: AAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTC...CTGGATACCAGTCTCCACTTTGCACGCCGGAACTGCCTTGGGACCACAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GGLECKDDATEIVSSVCFFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTGAGTCAACAGAACAATaGCTCACGATGCTGGACCGT +
Preference number: 5 (lower is better)
Translates to: VQSGDWYPGIASIAQETIESTEQ*LTMLDR
Trigger: ACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACTC...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTGAGTCAACAGAACAATaGCTCACGATGCTGGACCGT +
Preference number: 5 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCESTEQ*LTMLDR
Trigger: ACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACTC...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATACCACCCAGGGCCATGTaGACTATGATCTCCTATCCC +
Preference number: 5 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIPPRAM*TMISYP
Trigger: GGGATAGGAGATCATAGTCAACATGGCCCTGGGTGG...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTTGGGTTTGGAAGGCTTaGGAAGTTGTCATGGGAGCT +
Preference number: 5 (lower is better)
Translates to: VQSGDWYPGIASIAQETIWVWKA*EVVMGA
Trigger: AGCTCCCATGACAACTTCCAAAGCCTTCCAAACCCA...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAAAAATCCCAGCTTTTaGGGTTTGGAAGGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLKNPSF*GLEGFG
Trigger: TCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTTT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GTGCAAAGTGGAGACTGGTATCCAGGCATAGCATCCATTGCTCAGGAAACTATTTACCTATCGTCCTTCTaGGGTGAGGTGACACAGTAC +
Preference number: 5 (lower is better)
Translates to: VQSGDWYPGIASIAQETIYLSSF*GEVTQY
Trigger: GTACTGTGTCACCTCACCCAAGAAGGACGATAGGTA...AATAGTTTCCTGAGCAATGGATGCTATGCCTGGATACCAGTCTCCACTTTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGGCAGACAATTTCAATTaGTCCTTCAGCCCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLADNFN*SFSPSY
Trigger: ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGC...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCCAACAGCTGAAGGATaGGAAAAATCCAACATACTG +
Preference number: 5 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGPTAEG*EKSNIL
Trigger: CAGTATGTTGGATTTTTCCAATCCTTCAGCTGTTGG...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507093.5
CDS-3UTR CAA 90 bp GTCAGGTCAGACACAACCTGGTGCTATGAGATGTGGGGGAGGCATGCTGCAGAAAGGCTTCCATTTGGTTaGAAAGACCTGCTAAATAAA +
Preference number: 5 (lower is better)
Translates to: VRSDTTWCYEMWGRHAAERLPFG*KDLLNK
Trigger: TTTATTTAGCAGGTCTTTCAAACCAAATGGAAGCCT...TTCTGCAGCATGCCTCCCCCACATCTCATAGCACCAGGTTGTGTCTGACCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp GAGAAATCTCTTCATTGCTCACAGACGATGAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGAGTGTCCACCCAGGGCCATGTTGAC +
Preference number: 5 (lower is better)
Translates to: EKSLHCSQTMRQLNT*LEMASRVSTQGHVD
Trigger: GTCAACATGGCCCTGGGTGGACACTCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGTCTGTGAGATGCATCTaGGTAAGATCAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHESVRCI*VRSAGR
Trigger: TCTTCCAGCTGATCTTACCAAGATGCATCTCACAGA...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTCAGACATGGTCATGTTaGCAAATGCAGGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVQTWSC*QMQGAG
Trigger: ACCAGCTCCCTGCATTTGCAAACATGACCATGTCTG...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp GCAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTAACCATTCCAATAGTTaGATCCCAACATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AASFGLPHHDQQVPNTSTNHSNS*IPTSKG
Trigger: TCCTTTGGATGTTGGGATCAAACTATTGGAATGGTT...AGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCCCTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCAACCATTCCAATAGTTaGATCCCAACATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SLPFPKGLTRNPVAASFGNHSNS*IPTSKG
Trigger: TCCTTTGGATGTTGGGATCAAACTATTGGAATGGTT...GCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGCTTCATTTGGCCTTCCACACCATGACCAGCAGGTTCCTAACACCTCAACTGAACCCAGAATGTCTCTaGGTTTACAATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: QLHLAFHTMTSRFLTPQLNPECL*VYNVLK
Trigger: TTTGAGGACATTGTAAACCAAGAGACATTCTGGGTT...CAGTTGAGGTGTTAGGAACCTGCTGGTCATGGTGTGGAAGGCCAAATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACAGATGTTTCTCGTATTaGCTTGGTAACTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: GAALATDLAAVIRYDTANRCFSY*LGNFSQ
Trigger: TTGGGAAAAGTTACCAAGCAAATACGAGAAACATCT...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp GGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGTGGTTTCCTCATATAGCTTCTaGGCATTAAGCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GCSNELFVSNGLQNHEVVSSYSF*ALSREL
Trigger: CAGCTCTCTGCTTAATGCCAAGAAGCTATATGAGGA...AACCACCTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGGGCAGCTCTGGCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACGACATTTCAGATGATTaGGCTGATCTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: GAALATDLAAVIRYDTANDISDD*ADLFSL
Trigger: AAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTC...GTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGCCAGAGCTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGCTGGAGTCAGACAAGTaGTCAGATTTAGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHELESDK*SDLADG
Trigger: TCCATCAGCTAAATCTGACAACTTGTCTGACTCCAG...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCCCACCCAGGGCCATGTaGACTATGATCTCCTATCCC +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPPPRAM*TMISYP
Trigger: GGGATAGGAGATCATAGTCAACATGGCCCTGGGTGG...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGGTCAGTGGCATCCTaGGGGTCCAAGCCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYGSVAS*GSKPSD
Trigger: ATCTGAAGGCTTGGACCCCAAGGATGCCACTGACCC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGCTCAGGTCTATTTCATaGCTCGGAGTAGAGGGAATA +
Preference number: 5 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSLRSIS*LGVEGI
Trigger: TATTCCCTCTACTCCGAGCAATGAAATAGACCTGAG...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGAGACCTACATTGCATaGGTGCTACAGATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEETYIA*VLQIKS
Trigger: TGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGCCTTTTGGCTCCAAGTaGATCTGGGTAGTGCACGTT +
Preference number: 5 (lower is better)
Translates to: QRASYFSQTETYIALVLQPFGSK*IWVVHV
Trigger: AACGTGCACTACCCAGATCAACTTGGAGCCAAAAGG...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTTCTGTGAGATGCATCTaGGTAAGATCAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCSVRCI*VRSAGR
Trigger: TCTTCCAGCTGATCTTACCAAGATGCATCTCACAGA...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTCGCTCAGGTGTTGCCTaGATCACAATGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGRSGVA*ITMCPF
Trigger: GAAAGGACACATTGTGATCAAGGCAACACCTGAGCG...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTCTCGCGGGAAGCCTTTaGCAGCACAACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFLAGSL*QHNLSP
Trigger: TGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAG...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCCCATTTCCCAAAGGACTGACAAGAAACCCTGTGGCAGCTTCATTTGGCCTTAATGTCATATCTTTCTaGACAACAGGGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: LPFPKGLTRNPVAASFGLNVISF*TTGKSG
Trigger: TCCACTCTTCCCTGTTGTCAAGAAAGATATGACATT...AAGGCCAAATGAAGCTGCCACAGGGTTTCTTGTCAGTCCTTTGGGAAATGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGAGTCATTCGAACAACTaGGCGGATTTCCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHESHSNN*ADFLGN
Trigger: ATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGACT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCCACTGATCTTGCTGCTGTGATCAGATATGATACTGCCAACTTTGTGAGGGGAAGTCATTCGAACAACTaGGCGGATTTCCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ATDLAAVIRYDTANFVRGSHSNN*ADFLGN
Trigger: ATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGACT...TCCCCTCACAAAGTTGGCAGTATCATATCTGATCACAGCAGCAAGATCAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCGCTTACTCTGTGGGGTaGATGCAAGTGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: GGLECKDDATEIVSSVCFAYSVG*MQVGFS
Trigger: ACTAAAGCCCACTTGCATCAACCCCACAGAGTAAGC...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCTGGAGTCAGACAAGTaGTCAGATTTAGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCLESDK*SDLADG
Trigger: TCCATCAGCTAAATCTGACAACTTGTCTGACTCCAG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCCACCCAGGGCCATGTaGACTATGATCTCCTATCCC +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALPPRAM*TMISYP
Trigger: GGGATAGGAGATCATAGTCAACATGGCCCTGGGTGG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATGTCATGGGAGCTGCTaGAACACGAAGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQICHGSC*NTKSNF
Trigger: GAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGACA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATGGGTTTGGAAGGCTTaGGAAGTTGTCATGGGAGCT +
Preference number: 5 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQIWVWKA*EVVMGA
Trigger: AGCTCCCATGACAACTTCCAAAGCCTTCCAAACCCA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTTGTTATGCATCATCTTaGACCTCTGCACTGCCACAC +
Preference number: 5 (lower is better)
Translates to: TQVYFIARSRGNKTSGLVCYASS*TSALPH
Trigger: GTGTGGCAGTGCAGAGGTCAAAGATGATGCATAACA...AACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGTTATGCATCATCTTaGACCTCTGCACTGCCACAC +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWCYASS*TSALPH
Trigger: GTGTGGCAGTGCAGAGGTCAAAGATGATGCATAACA...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCAACACAGGCCACGAGGTaGCTACTGAGAGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPTQATR*LLREAG
Trigger: ACCAGCTTCTCTCAGTAGCAACCTCGTGGCCTGTGT...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATACACAGGCCACGAGGTaGCTACTGAGAGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYTQATR*LLREAG
Trigger: ACCAGCTTCTCTCAGTAGCAACCTCGTGGCCTGTGT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCTGTGGCAGCTTCATTaGGCCTTCCACACCATGACC +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALLWQLH*AFHTMT
Trigger: GGTCATGGTGTGGAAGGCCAAATGAAGCTGCCACAG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATCTGTGGCAGCTTCATTaGGCCTTCCACACCATGACC +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYLWQLH*AFHTMT
Trigger: GGTCATGGTGTGGAAGGCCAAATGAAGCTGCCACAG...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS GCA 90 bp TCTGCAGGTTCTTTTTCAAGACATTCTCGAACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCAATCTCTTCATCTTCCTCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: SAGSFSRHSRTRSRP*NGSVRSISSSSSSS
Trigger: TGACGAAGAGGAAGATGAAGAGATTGATCGAACAGATCCATTGCAGGGGCGAGATCTTGTTCGAGAATGTCTTGAAAAAGAACCTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 90 bp CATGAGTCAAGCTCTTGCCCATCTTCAAGAATAATAGCTCCAGCCTaGTCTACCACTTCAAAAATCATCACTGAGCAGAGTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: HESSSCPSSRIIAPA*STTSKIITEQSSLL
Trigger: AAGGAGAGAACTCTGCTCAGTGATGATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTATTCTTGAAGATGGGCAAGAGCTTGACTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS CCA 90 bp AGGTTCTTTTTCAAGACATTCTCGAACAAGATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTCTTCATCTTCCTCTTCGTCATCCTC +
Preference number: 5 (lower is better)
Translates to: RFFFKTFSNKISPLQ*ICSINLFIFLFVIL
Trigger: GAGGATGACGAAGAGGAAGATGAAGAGATTGATCGAACAGATCCATTGCAGGGGCGAGATCTTGTTCGAGAATGTCTTGAAAAAGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATACGCTCAGGTGTTGCCTaGATCACAATGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIRSGVA*ITMCPF
Trigger: GAAAGGACACATTGTGATCAAGGCAACACCTGAGCG...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAACTCGCGGGAAGCCTTTaGCAGCACAACCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKLAGSL*QHNLSP
Trigger: TGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAG...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGAACCCAGAATGTCTCTaGGTTTACAATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSNPECL*VYNVLK
Trigger: TTTGAGGACATTGTAAACCAAGAGACATTCTGGGTT...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AACCTCTGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATAATGTCATATCTTTCTaGACAACAGGGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: NLWTGCSNELFVSNGLQNNVISF*TTGKSG
Trigger: TCCACTCTTCCCTGTTGTCAAGAAAGATATGACATT...ATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTTTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGAACCCAGTCTCTATTaGTTGGATCTATACTTTCAG +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEEPSLY*LDLYFQ
Trigger: CTGAAAGTATAGATCCAACAAATAGAGACTGGGTTC...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGCTATGAGATGTGGGGGAGGCATGCTGCAGAACACTGCATAAAGTCAAATTCGGGAGACAAACATTGCTaGTTACAGGATACCTTACAA +
Preference number: 5 (lower is better)
Translates to: CYEMWGRHAAEHCIKSNSGDKHC*LQDTLQ
Trigger: TTGTAAGGTATCCTGTAACAAGCAATGTTTGTCTCC...CGAATTTGACTTTATGCAGTGTTCTGCAGCATGCCTCCCCCACATCTCATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp CAACTTCCACGACCACTGTCAGCTGCTTCTATAATGATATGCTCTTaGGAAATCTCTTCATTGCTCACAGACGATGAGACAGCTAAACAC +
Preference number: 5 (lower is better)
Translates to: QLPRPLSAASIMICS*EISSLLTDDETAKH
Trigger: GTGTTTAGCTGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTCAAGAGCATATCATTATAGAAGCAGCTGACAGTGGTCGTGGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAATCTGTGAGATGCATCTaGGTAAGATCAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQSVRCI*VRSAGR
Trigger: TCTTCCAGCTGATCTTACCAAGATGCATCTCACAGA...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATCGCTCAGGTGTTGCCTaGATCACAATGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYRSGVA*ITMCPF
Trigger: GAAAGGACACATTGTGATCAAGGCAACACCTGAGCG...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATCCTGAATCAGCAGCTTaGCTACCAGGTTCTACTCCT +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYPESAA*LPGSTP
Trigger: AGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAGG...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AATCATGAGGTGGTTCTTGCCCATTCCTCCACGACTTTCAGTGGTTTTCAAATATCCTCATATAGCTTCTaGGCATTAAGCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: NHEVVLAHSSTTFSGFQISSYSF*ALSREL
Trigger: CAGCTCTCTGCTTAATGCCAAGAAGCTATATGAGGA...TATTTGAAAACCACTGAAAGTCGTGGAGGAATGGGCAAGAACCACCTCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TGGACTGGTTGTAGCAATGAGCTGTTCGTTAGCAATGGCCTGCAGAATCATGAGGACATTTCAGATGATTaGGCTGATCTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: WTGCSNELFVSNGLQNHEDISDD*ADLFSL
Trigger: AAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTC...CTCATGATTCTGCAGGCCATTGCTAACGAACAGCTCATTGCTACAACCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAATTTGTGAGGGGAGCCTaGAGGAGATGCAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKFVRGA*RRCRRT
Trigger: AGTCCTCCTGCATCTCCTCAAGGCTCCCCTCACAAA...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGAGTCAACAGAACAATaGCTCACGATGCTGGACCGT +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALESTEQ*LTMLDR
Trigger: ACGGTCCAGCATCGTGAGCAATTGTTCTGTTGACTC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATTGTCATGGGAGCTGCTaGAACACGAAGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYCHGSC*NTKSNF
Trigger: GAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGACA...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGAGACCTACATTGCATaGGTGCTACAGATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQETYIA*VLQIKS
Trigger: TGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp AAGAATAATAGCTCCAGCCTGCTCTACCACTTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTACAGACATGGTCATGTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: KNNSSSLLYHFKNHH*AEFSPYRHGHVCKC
Trigger: GCATTTGCAAACATGACCATGTCTGTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAAGTGGTAGAGCAGGCTGGAGCTATTATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 90 bp ACCCTCAGGAGTAACAGAAACTTCACAGAGAGAATATGTGTCGGATaGACCGGTCAAACCAAATTCATGAACAGCATGAAAAACTACTTC +
Preference number: 5 (lower is better)
Translates to: TLRSNRNFTERICVG*TGQTKFMNSMKNYF
Trigger: GAAGTAGTTTTTCATGCTGTTCATGAATTTGGTTTGACCGGTGCATCCGACACATATTCTCTCTGTGAAGTTTCTGTTACTCCTGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504919.1
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 90 bp GGTTCTAAAGTAGTTTTGCTTGTTGTTCTGCTTTGGACATGCTATTaGCACTACCATTATAGCAGGCCCACTGTGAGCATGTTAACCAAT +
Preference number: 5 (lower is better)
Translates to: GSKVVLLVVLLWTCY*HYHYSRPTVSMLTN
Trigger: ATTGGTTAACATGCTCACAGTGGGCCTGCTATAATGGTAGTGGCAATAGCATGTCCAAAGCAGAACAACAAGCAAAACTACTTTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS-3UTR CAA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAAATCTTCTTCGGGATaGTCTGGCAGGAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEKSSSG*SGRNFS
Trigger: AGAGAAATTCCTGCCAGACAATCCCGAAGAAGATTT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp ACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCAGAACATCCAGCATGTTaGAATTTGTGCTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: TYIALVLQIKSHLCVDQAEHPAC*NLCFLD
Trigger: GTCAAGGAAGCACAAATTCAAACATGCTGGATGTTC...TGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGAACATCCAGCATGTTaGAATTTGTGCTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQEHPAC*NLCFLD
Trigger: GTCAAGGAAGCACAAATTCAAACATGCTGGATGTTC...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTCTGAAGGATTTTCTTTaGCAAGTAAGCCCCACCTAT +
Preference number: 5 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGLKDFL*QVSPTY
Trigger: ATAGGTGGGGCTTACTTGCAAAAGAAAATCCTTCAG...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGGAGACAGCTAAACACTaGATTAGAGATGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPEETAKH*IRDGFK
Trigger: CTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTC...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAATCATGAGGTGGTTCTaGCCCATTCCTCCACGACTT +
Preference number: 5 (lower is better)
Translates to: YTRISLVLADNFNLSFSPIMRWF*PIPPRL
Trigger: AAGTCGTGGAGGAATGGGCAAGAACCACCTCATGAT...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGGTTGTAGCAATGAGCTGTCCCAGTCTCTATTTGTaGGATCTATACTTTCAGTTA +
Preference number: 5 (lower is better)
Translates to: IARSRGNKTSGLVVAMSCPSLYL*DLYFQL
Trigger: TAACTGAAAGTATAGATCCAACAAATAGAGACTGGG...ACAGCTCATTGCTACAACCAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGGAACCCAGTCTCTATTaGTTGGATCTATACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWEPSLY*LDLYFQ
Trigger: CTGAAAGTATAGATCCAACAAATAGAGACTGGGTTC...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp ATAACTCAGGTCTATTTCATTGCTCGGAGTAGAGGGAATAAAACCTCTGGACTGACAAAGCATTTGGCTTaGGCTCCTGATCAATGTGAT +
Preference number: 5 (lower is better)
Translates to: ITQVYFIARSRGNKTSGLTKHLA*APDQCD
Trigger: ATCACATTGATCAGGAGCCAAAGCCAAATGCTTTGT...CAGTCCAGAGGTTTTATTCCCTCTACTCCGAGCAATGAAATAGACCTGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS TCA 90 bp GAAGATGTTTCTCGTATTTGCTTGGTAACTTTTCCCAAGTTCCTCTaGGTCTTGCTACAGATGCCAGGTTCAAGCCACTTATTATTGCAA +
Preference number: 5 (lower is better)
Translates to: EDVSRICLVTFPKFL*VLLQMPGSSHLLLQ
Trigger: TTGCAATAATAAGTGGCTTGAACCTGGCATCTGTAGCAAGACTCAGAGGAACTTGGGAAAAGTTACCAAGCAAATACGAGAAACATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCAAATCTTCTTCGGGATaGTCTGGCAGGAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPKSSSG*SGRNFS
Trigger: AGAGAAATTCCTGCCAGACAATCCCGAAGAAGATTT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTTCTGTGAGATGCATCTaGGTAAGATCAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLSVRCI*VRSAGR
Trigger: TCTTCCAGCTGATCTTACCAAGATGCATCTCACAGA...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCAACCCAGAATGTCTCTaGGTTTACAATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: GGLECKDDATEIVSSVCFNPECL*VYNVLK
Trigger: TTTGAGGACATTGTAAACCAAGAGACATTCTGGGTT...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGAGATGTTTCTCGTATTaGCTTGGTAACTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWRCFSY*LGNFSQ
Trigger: TTGGGAAAAGTTACCAAGCAAATACGAGAAACATCT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGAGATGTTTCTCGTATTaGCTTGGTAACTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: QRASYFSQTETYIALVLQRCFSY*LGNFSQ
Trigger: TTGGGAAAAGTTACCAAGCAAATACGAGAAACATCT...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAATGTCATATCTTTCTaGACAACAGGGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPENVISF*TTGKSG
Trigger: TCCACTCTTCCCTGTTGTCAAGAAAGATATGACATT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GGAGGACTAGAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCAATGTCATATCTTTCTaGACAACAGGGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: GGLECKDDATEIVSSVCFNVISF*TTGKSG
Trigger: TCCACTCTTCCCTGTTGTCAAGAAAGATATGACATT...GAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTCTAGTCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAGTCATTCGAACAACTaGGCGGATTTCCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSISHSNN*ADFLGN
Trigger: ATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGACT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCAGTCATTCGAACAACTaGGCGGATTTCCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPSHSNN*ADFLGN
Trigger: ATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGACT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAGAACATCCAGCATGTTaGAATTTGTGCTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIEHPAC*NLCFLD
Trigger: GTCAAGGAAGCACAAATTCAAACATGCTGGATGTTC...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGTTCTCACTTAAATTCTaGGTCAAGGTACCATATGCA +
Preference number: 5 (lower is better)
Translates to: QRASYFSQTETYIALVLQFSLKF*VKVPYA
Trigger: TGCATATGGTACCTTGACCAAGAATTTAAGTGAGAA...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAATGTCATGGGAGCTGCTaGAACACGAAGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKCHGSC*NTKSNF
Trigger: GAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGACA...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTTGGGTTTGGAAGGCTTaGGAAGTTGTCATGGGAGCT +
Preference number: 5 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSWVWKA*EVVMGA
Trigger: AGCTCCCATGACAACTTCCAAAGCCTTCCAAACCCA...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAAAAATCCCAGCTTTTaGGGTTTGGAAGGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIKNPSF*GLEGFG
Trigger: TCCAAAGCCTTCCAAACCCAAAAAGCTGGGATTTTT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCGCAGACAATTTCAATTaGTCCTTCAGCCCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPADNFN*SFSPSY
Trigger: ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGC...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTCAACTGCAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGAGGCTTCCATTTGGTTaGAAAGACCTGCTAAATAAA +
Preference number: 5 (lower is better)
Translates to: LNCKGLPISLKLRPTLHWRLPFG*KDLLNK
Trigger: TTTATTTAGCAGGTCTTTCAAACCAAATGGAAGCCT...CCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTGCAGTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATAACAAAGCATTTGGCTTaGGCTCCTGATCAATGTGAT +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSITKHLA*APDQCD
Trigger: ATCACATTGATCAGGAGCCAAAGCCAAATGCTTTGT...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAAAGGGCTTCCTATTTCTCTCAAACTGAGACCTACATTGCATTGGTGCTACAGGTTGAAACTTACTATTaGGCAAAAGTTTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: QRASYFSQTETYIALVLQVETYY*AKVCTE
Trigger: CTCAGTGCAAACTTTTGCCAAATAGTAAGTTTCAAC...CTGTAGCACCAATGCAATGTAGGTCTCAGTTTGAGAGAAATAGGAAGCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS CCA 90 bp ACATCAGAATGCAGTAAAAACTCAATGCTTCCCTCAAATATGGAATaGTTAGGCAATATTTGGGTTCTAGAACTGAGGATCTGGGACATC +
Preference number: 5 (lower is better)
Translates to: TSECSKNSMLPSNME*LGNIWVLELRIWDI
Trigger: GATGTCCCAGATCCTCAGTTCTAGAACCCAAATATTGCCTAACCATTCCATATTTGAGGGAAGCATTGAGTTTTTACTGCATTCTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS-3UTR CAA 90 bp GAGACCTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAAGATGTTTCTCGTATTaGCTTGGTAACTTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: ETYIALVLQIKSHLCVDQRCFSY*LGNFSQ
Trigger: TTGGGAAAAGTTACCAAGCAAATACGAGAAACATCT...TTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCAATGTCATATCTTTCTaGACAACAGGGAAGAGTGGA +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPNVISF*TTGKSG
Trigger: TCCACTCTTCCCTGTTGTCAAGAAAGATATGACATT...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATAGTCATTCGAACAACTaGGCGGATTTCCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYSHSNN*ADFLGN
Trigger: ATTTCCAAGGAAATCCGCCAAGTTGTTCGAATGACT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTGAACATCCAGCATGTTaGAATTTGTGCTTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLEHPAC*NLCFLD
Trigger: GTCAAGGAAGCACAAATTCAAACATGCTGGATGTTC...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTTCCTCATATAGCTTCTaGGCATTAAGCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFSSYSF*ALSREL
Trigger: CAGCTCTCTGCTTAATGCCAAGAAGCTATATGAGGA...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TTCCTAAAACTTTCTGAGGTAAACTTGTATCTGTGGTGCATCTGTGCTGTGGGTTTCTCACTTAAATTCTaGGTCAAGGTACCATATGCA +
Preference number: 5 (lower is better)
Translates to: FLKLSEVNLYLWCICAVGFSLKF*VKVPYA
Trigger: TGCATATGGTACCTTGACCAAGAATTTAAGTGAGAA...ACCCACAGCACAGATGCACCACAGATACAAGTTTACCTCAGAAAGTTTTAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATGAGACAGCTAAACACTaGATTAGAGATGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYETAKH*IRDGFK
Trigger: CTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTC...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAACTCAGGTCTATTTCATaGCTCGGAGTAGAGGGAATA +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNELRSIS*LGVEGI
Trigger: TATTCCCTCTACTCCGAGCAATGAAATAGACCTGAG...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAGAGACCTACATTGCATaGGTGCTACAGATCAAGTCA +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNEETYIA*VLQIKS
Trigger: TGACTTGATCTGTAGCACCAATGCAATGTAGGTCTC...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GTAGATCAAGCATATCACCTCTGTAAAGATGACTTCTGTTTGGTCAGACCAGAGAATAGGAGACAAACATaGCTTGTTACAGGATACCTT +
Preference number: 5 (lower is better)
Translates to: VDQAYHLCKDDFCLVRPENRRQT*LVTGYL
Trigger: AAGGTATCCTGTAACAAGCAATGTTTGTCTCCTATT...CTCTGGTCTGACCAAACAGAAGTCATCTTTACAGAGGTGATATGCTTGATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCCATAAACTCCAGCAATaGTTCAATGTCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPHKLQQ*FNVIIS
Trigger: ACTGATGATGACATTGAACAATTGCTGGAGTTTATG...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATAACCCAGAATGTCTCTaGGTTTACAATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYNPECL*VYNVLK
Trigger: TTTGAGGACATTGTAAACCAAGAGACATTCTGGGTT...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CTACATTGCATTGGTGCTACAGATCAAGTCACATCTCTGTGTAGATCAAGCATATTCTCACTTAAATTCTaGGTCAAGGTACCATATGCA +
Preference number: 5 (lower is better)
Translates to: LHCIGATDQVTSLCRSSIFSLKF*VKVPYA
Trigger: TGCATATGGTACCTTGACCAAGAATTTAAGTGAGAA...TATGCTTGATCTACACAGAGATGTGACTTGATCTGTAGCACCAATGCAATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GCATGCTGCAGAACACTGCATAAAGTCAAATTCGTCTTCATTATTACAACACCCGACATTTCAGATGATTaGGCTGATCTTTTCTCACTT +
Preference number: 5 (lower is better)
Translates to: ACCRTLHKVKFVFIITTPDISDD*ADLFSL
Trigger: AAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTC...GGGTGTTGTAATAATGAAGACGAATTTGACTTTATGCAGTGTTCTGCAGCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCAAACTCAGGTCTATTTCATaGCTCGGAGTAGAGGGAATA +
Preference number: 5 (lower is better)
Translates to: QRQFYDLKHEYQLTRALKLRSIS*LGVEGI
Trigger: TATTCCCTCTACTCCGAGCAATGAAATAGACCTGAG...TTTGAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAAACTGAGACCTACATaGCATTGGTGCTACAGATCA +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNEKLRPT*HWCYRS
Trigger: TGATCTGTAGCACCAATGCAATGTAGGTCTCAGTTT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GAATGTAAAGATGACGCCACAGAAATAGTGTCTTCTGTATGCTTCTTACCACTTCATAAACTCCAGCAATaGTTCAATGTCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: ECKDDATEIVSSVCFLPLHKLQQ*FNVIIS
Trigger: ACTGATGATGACATTGAACAATTGCTGGAGTTTATG...AAGTGGTAAGAAGCATACAGAAGACACTATTTCTGTGGCGTCATCTTTACATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAACCATTCCAATAGTTaGATCCCAACATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNENHSNS*IPTSKG
Trigger: TCCTTTGGATGTTGGGATCAAACTATTGGAATGGTT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TCTATAGACCAGAACTCTCTAGAACCCAGTCTCTATTTGTTGGATCTATACTTTAACCCAGAATGTCTCTaGGTTTACAATGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SIDQNSLEPSLYLLDLYFNPECL*VYNVLK
Trigger: TTTGAGGACATTGTAAACCAAGAGACATTCTGGGTT...AAAGTATAGATCCAACAAATAGAGACTGGGTTCTAGAGAGTTCTGGTCTATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACAATTTCAATTTGTCCTTCAGCCCAAGCTATGGCTTGGAAATAATAATGCCATTCTCACTTAAATTCTaGGTCAAGGTACCATATGCA +
Preference number: 5 (lower is better)
Translates to: DNFNLSFSPSYGLEIIMPFSLKF*VKVPYA
Trigger: TGCATATGGTACCTTGACCAAGAATTTAAGTGAGAA...TGGCATTATTATTTCCAAGCCATAGCTTGGGCTGAAGGACAAATTGAAATTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCCCCAGTCTCTATTTGTaGGATCTATACTTTCAGTTA +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALPSLYL*DLYFQL
Trigger: TAACTGAAAGTATAGATCCAACAAATAGAGACTGGG...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCGTTGAAACTTACTATTaGGCAAAAGTTTGCACTGAG +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALVETYY*AKVCTE
Trigger: CTCAGTGCAAACTTTTGCCAAATAGTAAGTTTCAAC...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp AGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCAAGCTATTACAGATGTGCAGTTTaGTTTCTGTCTTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: RISLVLADNFNLSFSPSYYRCAV*FLSFAD
Trigger: ATCAGCAAAAGACAGAAACAAAACTGCACATCTGTA...ATAGCTTGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp GACCAGAGACAATTTTATGACCTCAAACATGAATATCAGCTAACAAGAGCTCTCTACAGATGTGCAGTTTaGTTTCTGTCTTTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: DQRQFYDLKHEYQLTRALYRCAV*FLSFAD
Trigger: ATCAGCAAAAGACAGAAACAAAACTGCACATCTGTA...GAGAGCTCTTGTTAGCTGATATTCATGTTTGAGGTCATAAAATTGTCTCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAACATAAACTCCAGCAATaGTTCAATGTCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNEHKLQQ*FNVIIS
Trigger: ACTGATGATGACATTGAACAATTGCTGGAGTTTATG...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
CDS-3UTR CAA 90 bp GATCGCAATGATGTGATTTATCACCCTCAAGAAAATTCACTAAAGGCTTTTTCTAACCATTCCAATAGTTaGATCCCAACATCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: DRNDVIYHPQENSLKAFSNHSNS*IPTSKG
Trigger: TCCTTTGGATGTTGGGATCAAACTATTGGAATGGTT...AGAAAAAGCCTTTAGTGAATTTTCTTGAGGGTGATAAATCACATCATTGCGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp TATACAAGAATATCCTTGGTATTGGCAGACAATTTCAATTTGTCCTTCAGCCCATTCTCACTTAAATTCTaGGTCAAGGTACCATATGCA +
Preference number: 5 (lower is better)
Translates to: YTRISLVLADNFNLSFSPFSLKF*VKVPYA
Trigger: TGCATATGGTACCTTGACCAAGAATTTAAGTGAGAA...TGGGCTGAAGGACAAATTGAAATTGTCTGCCAATACCAAGGATATTCTTGTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000671916.1
CDS-3UTR CAA 90 bp CCAGGCATAGCATCCATTGCTCAGGAAACTATTTATCTGCAGAAATTAAATGAAAATAGGAGACAAACATaGCTTGTTACAGGATACCTT +
Preference number: 5 (lower is better)
Translates to: PGIASIAQETIYLQKLNENRRQT*LVTGYL
Trigger: AAGGTATCCTGTAACAAGCAATGTTTGTCTCCTATT...TTCATTTAATTTCTGCAGATAAATAGTTTCCTGAGCAATGGATGCTATGCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509018.6
ENST00000671916.1
CDS GCA 90 bp AATTTACAGCATTTATATGCAATTCAATACAGTCGGACATCAGAATaGAGTAAAAACTCAATGCTTCCCTCAAATATGGAATGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: NLQHLYAIQYSRTSE*SKNSMLPSNMEWLG
Trigger: GCCTAACCATTCCATATTTGAGGGAAGCATTGAGTTTTTACTGCATTCTGATGTCCGACTGTATTGAATTGCATATAAATGCTGTAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS TCA 72 bp CTTCCTCAACGCCTGCCTAGCGCCAGGGTCCACGGGTaGGTTCATGGCCACGGCCCGGGTACTCCGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LPQRLPSARVHG*VHGHGPGTPQP
Trigger: AGGCTGCGGAGTACCCGGGCCGTGGCCATGAACTCACCCGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp TCGGGAGTCCGCTCGGGTGGCTTCTTCCTCAACGCCTaGCTAGCGCCAGGGTCCACGGGTGAGTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: SGVRSGGFFLNA*LAPGSTGEFMA
Trigger: GGCCATGAACTCACCCGTGGACCCTGGCGCTAGGCAGGCGTTGAGGAAGAAGCCACCCGAGCGGACTCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp AGCCCACGCCACAGTTCATTCACACTAGGTAGCGGGTaGGGTACCTTTCCCCCGCCCCAAGGAGGGAACTTC +
Preference number: 6 (lower is better)
Translates to: SPRHSSFTLGSG*GTFPPPQGGNF
Trigger: GAAGTTCCCTCCTTGGGGCGGGGGAAAGGTACCGCACCCGCTACCTAGTGTGAATGAACTGTGGCGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS CCA 72 bp TCCCTGAAGCGTGCTCTGTCTTTTCCAATGCCCCAGTaGATTCAGGGACTGCCAGGGCCTGAGAGGAACACC +
Preference number: 6 (lower is better)
Translates to: SLKRALSFPMPQ*IQGLPGPERNT
Trigger: GGTGTTCCTCTCAGGCCCTGGCAGTCCCTGAATCCACTGGGGCATTGGAAAAGACAGAGCACGCTTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp CCTCTGGTCCTGGAGGCCACCCACGCTTTGAAGATATaGCAAGAGTCTGGACCACGACAAGTCCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: PLVLEATHALKI*QESGPRQVHPQ
Trigger: CTGAGGATGGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 72 bp GGAGGCCACCCACGCTTTGAAGATATGGCAAGAGTCTaGACCACGACAAGTCCATCCTCAGCCGAATCTCTG +
Preference number: 6 (lower is better)
Translates to: GGHPRFEDMARV*TTTSPSSAESL
Trigger: CAGAGATTCGGCTGAGGATGGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS TCA 72 bp CCACCCAGGGCCATGTTGACTATGATCTCCTATCCCTaGAGCGTGCTCTGTCTTTTCCAATGCCCCAGTGGA +
Preference number: 6 (lower is better)
Translates to: PPRAMLTMISYP*SVLCLFQCPSG
Trigger: TCCACTGGGGCATTGGAAAAGACAGAGCACGCTTCAGGGATAGGAGATCATAGTCAACATGGCCCTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS TCA 72 bp AAAGCATTCCTCTGGTCCTGGAGGCCACCCACGCTTTaGAGATATGGCAAGAGTCTGGACCACGACAAGTCC +
Preference number: 6 (lower is better)
Translates to: KAFLWSWRPPTL*RYGKSLDHDKS
Trigger: GGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGAGGAATGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS GCA 72 bp AGGCTGAATTGTAGAGGGGACTCGCGGGAAGCCTTTTaGAGCACAACCTGTCTCCACTTAGCCTTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: RLNCRGDSREAF*STTCLHLAFAA
Trigger: TGCTGCAAAGGCTAAGTGGAGACAGGTTGTGCTGCAAAAGGCTTCCCGCGAGTCCCCTCTACAATTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp GAGCACCTCCCTGAACATCCAGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACCCCAGACTCCGCCACC +
Preference number: 6 (lower is better)
Translates to: EHLPEHPACLNL*FLDSVTPDSAT
Trigger: GGTGGCGGAGTCTGGGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000512052.5
ENST00000627212.2
CDS CCA 72 bp GGTCCGCTAAAGAAATCCCCAAATATCCTGGAGGAGTaGGAGGTGGCTCCCTATACCTATCGTCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: GPLKKSPNILEE*EVAPYTYRPSW
Trigger: CCAAGAAGGACGATAGGTATAGGGAGCCACCTCCCACTCCTCCAGGATATTTGGGGATTTCTTTAGCGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000512611.5
ENST00000671916.1
CDS CAA 72 bp TGTGAGCACCTCCCTGAACATCCAGCATGTTTGAATTaGTGCTTCCTTGACTCAGTGACCCCAGACTCCGCC +
Preference number: 6 (lower is better)
Translates to: CEHLPEHPACLN*CFLDSVTPDSA
Trigger: GGCGGAGTCTGGGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000512052.5
ENST00000627212.2
CDS CAA 72 bp GGAGTGGGAGGTGGCTCCCTATACCTATCGTCCTTCTaGGGTGAGGTGACACAGTACACAATCAAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: GVGGGSLYLSSF*GEVTQYTIKPF
Trigger: AAAGGGCTTGATTGTGTACTGTGTCACCTCACCCAAGAAGGACGATAGGTATAGGGAGCCACCTCCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000512611.5
ENST00000671916.1
CDS CAA 72 bp AAAAGCATTCCTCTGGTCCTGGAGGCCACCCACGCTTaGAAGATATGGCAAGAGTCTGGACCACGACAAGTC +
Preference number: 6 (lower is better)
Translates to: KSIPLVLEATHA*KIWQESGPRQV
Trigger: GACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGAGGAATGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CAA 90 bp GTAACAAGAAAAAGCATTCCTCTGGTCCTGGAGGCCACCCACGCTTaGAAGATATGGCAAGAGTCTGGACCACGACAAGTCCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: VTRKSIPLVLEATHA*KIWQESGPRQVHPQ
Trigger: CTGAGGATGGACTTGTCGTGGTCCAGACTCTTGCCATATCTTCAAAGCGTGGGTGGCCTCCAGGACCAGAGGAATGCTTTTTCTTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 72 bp GAGAGGAACACCGTTCATCCTGTAGAGCTGCAGACATaGAGTCAACAGAACAATTGCTCACGATGCTGGACC +
Preference number: 6 (lower is better)
Translates to: ERNTVHPVELQT*SQQNNCSRCWT
Trigger: GGTCCAGCATCGTGAGCAATTGTTCTGTTGACTCCATGTCTGCAGCTCTACAGGATGAACGGTGTTCCTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp CCAGGGATGGGCATTATAGCCAGACTATGCCTACAGTaGCTTGTTCCCACAATGCTGTCATCTTGTGATTGG +
Preference number: 6 (lower is better)
Translates to: PGMGIIARLCLQ*LVPTMLSSCDW
Trigger: CCAATCACAAGATGACAGCATTGTGGGAACAAGGCACTGTAGGCATAGTCTGGCTATAATGCCCATCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504919.1
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp GAAGGATTGGAAAAATCCAACATACTGGTGGTAGGCTaGAGGAGATCAGGGCTGCTGGATGAGAGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: EGLEKSNILVVG*RRSGLLDESVP
Trigger: TGGAACACTCTCATCCAGCAGCCCTGATCTCCTGCAGCCTACCACCAGTATGTTGGATTTTTCCAATCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504919.1
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS TCA 72 bp CTTCATTGCTCACAGACGATGAGACAGCTAAACACTTaGTTAGAGATGGCTTCAAGAGTGTCCACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LHCSQTMRQLNT*LEMASRVSTQG
Trigger: GCCCTGGGTGGACACTCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTCATCGTCTGTGAGCAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp CAGTGCCTTGTTCCCACAATGCTGTCATCTTGTGATTaGCTTAGGCCTCCATCACTAAATAGCTTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: QCLVPTMLSSCD*LRPPSLNSFGG
Trigger: GCCTCCAAAGCTATTTAGTGATGGAGGCCTAAGCCAATCACAAGATGACAGCATTGTGGGAACAAGGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp CCGCCACCTCTTCTTCCTCTGTCGAAACATCATAGCTaGGTCCATGTTAGCAGAAGTCATTCGAACAACTTG +
Preference number: 6 (lower is better)
Translates to: PPPLLPLSKHHS*VHVSRSHSNNL
Trigger: CAAGTTGTTCGAATGACTTCTGCTAACATGGACCCAGCTATGATGTTTCGACAGAGGAAGAAGAGGTGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000512052.5
ENST00000627212.2
CDS CCA 72 bp CAGCTTTTTGGGTTTGGAAGGCTTTGGAAGTTGTCATaGGAGCTGCTTGAACACGAAGTCCAACTTCCACGA +
Preference number: 6 (lower is better)
Translates to: QLFGFGRLWKLS*ELLEHEVQLPR
Trigger: TCGTGGAAGTTGGACTTCGTGTTCAAGCAGCTCCCATGACAACTTCCAAAGCCTTCCAAACCCAAAAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp CAAATTATGCCTCTGAGGCTGAGTTACAATCTTCGATaGAACACAGGCCACGAGGTTGCTACTGAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QIMPLRLSYNLR*NTGHEVATERS
Trigger: GCTTCTCTCAGTAGCAACCTCGTGGCCTGTGTTCCATCGAAGATTGTAACTCAGCCTCAGAGGCATAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000512611.5
ENST00000671916.1
CDS CCA 72 bp CAGTGCCTTGTTCCCACAATGCTGTCATCTTGTGATTaGCTTAGGCCTCCATCATTCCTTTCTCCTGTGATG +
Preference number: 6 (lower is better)
Translates to: QCLVPTMLSSCD*LRPPSFLSPVM
Trigger: CATCACAGGAGAAAGGAATGATGGAGGCCTAAGCCAATCACAAGATGACAGCATTGTGGGAACAAGGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514179.5
CDS TCA 72 bp TGGTGGCAGTCTAGAGAGGCTGTTATGCATCATCTTTaGCCTCTGCACTGCCACACTATAATCTGGAGGTTT +
Preference number: 6 (lower is better)
Translates to: WWQSREAVMHHL*PLHCHTIIWRF
Trigger: AAACCTCCAGATTATAGTGTGGCAGTGCAGAGGTCAAAGATGATGCATAACAGCCTCTCTAGACTGCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296859.10
ENST00000509018.6
ENST00000512611.5
ENST00000671916.1
CDS GCA 72 bp GAGCACCTCCCTGAACATCCAGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACCTCTGTCGAAACATCA +
Preference number: 6 (lower is better)
Translates to: EHLPEHPACLNL*FLDSVTSVETS
Trigger: TGATGTTTCGACAGAGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308008.10
ENST00000509018.6
ENST00000515170.5
ENST00000671916.1
CDS CCA 72 bp ATATTACGAAACAAATCAAAGTCCCTCATTGACAGCTaGGTGGCCACCTCAATGGTACTGAGCTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: ILRNKSKSLIDS*VATSMVLSCSM
Trigger: CATGCTGCAGCTCAGTACCATTGAGGTGGCCACCCAGCTGTCAATGAGGGACTTTGATTTGTTTCGTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp TCCCATAGTTTGGTTCATACGTGTCAGACAGAGAACTaGAGGAGGTCCAACTCTTTCTCTCTAGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SHSLVHTCQTEN*RRSNSFSLGFL
Trigger: AAGGAAGCCTAGAGAGAAAGAGTTGGACCTCCTCCAGTTCTCTGTCTGACACGTATGAACCAAACTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS CAA 72 bp TGTGAGCACCTCCCTGAACATCCAGCATGTTTGAATTaGTGCTTCCTTGACTCAGTGACCTCTGTCGAAACA +
Preference number: 6 (lower is better)
Translates to: CEHLPEHPACLN*CFLDSVTSVET
Trigger: TGTTTCGACAGAGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308008.10
ENST00000509018.6
ENST00000515170.5
ENST00000671916.1
CDS CAA 72 bp TCTTCATTGCTCACAGACGATGAGACAGCTAAACACTaGATTAGAGATGGCTTCAAGAGTGTCCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSLLTDDETAKH*IRDGFKSVHPG
Trigger: CCCTGGGTGGACACTCTTGAAGCCATCTCTAATCAAGTGTTTAGCTGTCTCATCGTCTGTGAGCAATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS TCA 72 bp AGCTCCAGCCTGCTCTACCACTTCAAAAATCATCACTaGGCAGAGTTCTCTCCTTACAGACATGGTCATGTT +
Preference number: 6 (lower is better)
Translates to: SSSLLYHFKNHH*AEFSPYRHGHV
Trigger: AACATGACCATGTCTGTAAGGAGAGAACTCTGCTCAGTGATGATTTTTGAAGTGGTAGAGCAGGCTGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS TCA 72 bp ACTATGGCTGGAGTCAGACAAGTTGTCAGATTTAGCTaGTGGAATAAGTGTGTAACCTTTGTGAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: TMAGVRQVVRFS*WNKCVTFVRGA
Trigger: GGCTCCCCTCACAAAGGTTACACACTTATTCCATCAGCTAAATCTGACAACTTGTCTGACTCCAGCCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp GTAGTTTTGCTTGTTGTTCTGCTTTGGACATGCTATTaGCACTACCATTATAGCAGGCCCACTGTGAGCATG +
Preference number: 6 (lower is better)
Translates to: VVLLVVLLWTCY*HYHYSRPTVSM
Trigger: CATGCTCACAGTGGGCCTGCTATAATGGTAGTGGCAATAGCATGTCCAAAGCAGAACAACAAGCAAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 72 bp TTCCTCTTCGTCATCCTCAGAATCAACAGGTCCTTCTaGAAGACGTGTCAAATCTACATCTCCTACCTCACT +
Preference number: 6 (lower is better)
Translates to: FLFVILRINRSF*KTCQIYISYLT
Trigger: AGTGAGGTAGGAGATGTAGATTTGACACGTCTTCCAGAAGGACCTGTTGATTCTGAGGATGACGAAGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp GAGTGGCATATTCCATCAGGCCTGTGTTTGTGCCTATaGAACCTATGGCACAACAGTAACAAGAAAAAGCAT +
Preference number: 6 (lower is better)
Translates to: EWHIPSGLCLCL*NLWHNSNKKKH
Trigger: ATGCTTTTTCTTGTTACTGTTGTGCCATAGGTTGCATAGGCACAAACACAGGCCTGATGGAATATGCCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 72 bp TTCAAGACATTCTCGAACAAGATCTCGCCCCTGCAATaGATCTGTTCGATCAATCTCTTCATCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: FKTFSNKISPLQ*ICSINLFIFLF
Trigger: GAAGAGGAAGATGAAGAGATTGATCGAACAGATCCATTGCAGGGGCGAGATCTTGTTCGAGAATGTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS CAA 72 bp TGTGAGCACCTCCCTGAACATCCAGCATGTTTGAATTaGTGCTTCCTTGACTCAGTGACCTATAAGAAGATG +
Preference number: 6 (lower is better)
Translates to: CEHLPEHPACLN*CFLDSVTYKKM
Trigger: CATCTTCTTATAGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CAA 72 bp AGAGCACTAAATTCACATCAGTGCAGGGTCTTTTGTTaGTCCCTTCTTCCTGATGGGGTGCAAATTAACAGC +
Preference number: 6 (lower is better)
Translates to: RALNSHQCRVFC*SLLPDGVQINS
Trigger: GCTGTTAATTTGCACCCCATCAGGAAGAAGGGACAAACAAAAGACCCTGCACTGATGTGAATTTAGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515170.5
CDS TCA 72 bp CGACCACTGTCAGCTGCTTCTATAATGATATGCTCTTaGGAAATCTCTTCATTGCTCACAGACGATGAGACA +
Preference number: 6 (lower is better)
Translates to: RPLSAASIMICS*EISSLLTDDET
Trigger: TGTCTCATCGTCTGTGAGCAATGAAGAGATTTCTCAAGAGCATATCATTATAGAAGCAGCTGACAGTGGTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296859.10
ENST00000507093.5
ENST00000509018.6
ENST00000512611.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp TCTTTTTCAAGACATTCTCGAACAAGATCTCGCCCCTaGAATGGATCTGTTCGATCAATCTCTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: SFSRHSRTRSRP*NGSVRSISSSS
Trigger: GGAAGATGAAGAGATTGATCGAACAGATCCATTGCAGGGGCGAGATCTTGTTCGAGAATGTCTTGAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp ACAGACATGGTCATGTTTGCAAATGCAGGGAGCTGGTaGATAAACTCCAGCAATTGTTCAATGTCATCATCA +
Preference number: 6 (lower is better)
Translates to: TDMVMFANAGSW*INSSNCSMSSS
Trigger: TGATGATGACATTGAACAATTGCTGGAGTTTATGCACCAGCTCCCTGCATTTGCAAACATGACCATGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504039.2
ENST00000504575.5
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000513227.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp TCTGATCACCACGTTTCAGTCCTGAATCAGCAGCTTTaGTACCAGGTTCTACTCCTTCAACAAAAATACCAA +
Preference number: 6 (lower is better)
Translates to: SDHHVSVLNQQL*YQVLLLQQKYQ
Trigger: TTGGTATTTTTGTTGAAGGAGTAGAACCTGGTAGCAAAGCTGCTGATTCAGGACTGAAACGTGGTGATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS GCA 72 bp GAGCACCTCCCTGAACATCCAGCATGTTTGAATTTGTaGTTCCTTGACTCAGTGACCTATAAGAAGATGAAA +
Preference number: 6 (lower is better)
Translates to: EHLPEHPACLNL*FLDSVTYKKMK
Trigger: TTTCATCTTCTTATAGGTCACTGAGTCAAGGAAGCACAAATTCAAACATGCTGGATGTTCAGGGAGGTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CAA 90 bp GTTTGGCCAGCTGACCTCATAGGCACTGGAGACATTTCAGATGATTaGGCTGATCTTTTCTCACTTAAATTCTTGGTCAAGGTACCATAT +
Preference number: 6 (lower is better)
Translates to: VWPADLIGTGDISDD*ADLFSLKFLVKVPY
Trigger: ATATGGTACCTTGACCAAGAATTTAAGTGAGAAAAGATCAGCCAAATCATCTGAAATGTCTCCAGTGCCTATGAGGTCAGCTGGCCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000512052.5
ENST00000512611.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS CAA 90 bp TGGAAGAGAAAGATAGCTGTTAACCTCCACATCATCAGTAATGGTTaGGCGCTCTCCTTTATAGTTAATTTTCCGAAATCTTCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: WKRKIAVNLHIISNG*ALSFIVNFPKSSSG
Trigger: TCCCGAAGAAGATTTCGGAAAATTAACTATAAAGGAGAGCGCCAAACCATTACTGATGATGTGGAGGTTAACAGCTATCTTTCTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000515170.5
ENST00000627212.2
CDS GCA 72 bp AGTAACAGAAACTTCACAGAGAGAATATGTGTCGGATaGACCGGTCAAACCAAATTCATGAACAGCATGAAA +
Preference number: 6 (lower is better)
Translates to: SNRNFTERICVG*TGQTKFMNSMK
Trigger: TTTCATGCTGTTCATGAATTTGGTTTGACCGGTGCATCCGACACATATTCTCTCTGTGAAGTTTCTGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000504919.1
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS CAA 72 bp CTATTTGAATTGAAGATGGCACTCCCTTTCTCATCTTaGATGTTGCTTCCAACATCCTTCACTTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: LFELKMALPFSS*MLLPTSFTFSQ
Trigger: CTGTGAGAAAGTGAAGGATGTTGGAAGCAACATCAAAGATGAGAAAGGGAGTGCCATCTTCAATTCAAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308008.10
ENST00000512052.5
CDS GCA 72 bp TCATCTACTTTAGTCCTGACAATTCCATGCATGTACTaGTTATCCAGAGTGGGAGTAATTCCAAAACTATTT +
Preference number: 6 (lower is better)
Translates to: SSTLVLTIPCMY*LSRVGVIPKLF
Trigger: AAATAGTTTTGGAATTACTCCCACTCTGGATAAGCAGTACATGCATGGAATTGTCAGGACTAAAGTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000514179.5
ENST00000515170.5
ENST00000627212.2
CDS CAA 72 bp ACTCTAGCACTTGCTGCACAAGGCTTAACCATCTATTaGTTCATTTGGTACCAATACGGCAATATAAAATCA +
Preference number: 6 (lower is better)
Translates to: TLALAAQGLTIY*FIWYQYGNIKS
Trigger: TGATTTTATATTGCCGTATTGGTACCAAATGAACAAATAGATGGTTAAGCCTTGTGCAGCAAGTGCTAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514179.5
CDS CAA 90 bp CTGCAAGTAACTCTAGCACTTGCTGCACAAGGCTTAACCATCTATTaGTTCATTTGGTACCAATACGGCAATATAAAATCACATATGAAA +
Preference number: 6 (lower is better)
Translates to: LQVTLALAAQGLTIY*FIWYQYGNIKSHMK
Trigger: TTTCATATGTGATTTTATATTGCCGTATTGGTACCAAATGAACAAATAGATGGTTAAGCCTTGTGCAGCAAGTGCTAGAGTTACTTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514179.5
CDS CAA 90 bp TACTTCTTTAGCTGTGGTGTCTTTACTGATGATAATGTAGCAACTTaGCTGATCCACTTTGAAAACTCTTATAACTTGATCAGGGATATC +
Preference number: 6 (lower is better)
Translates to: YFFSCGVFTDDNVAT*LIHFENSYNLIRDI
Trigger: GATATCCCTGATCAAGTTATAAGAGTTTTCAAAGTGGATCAGCAAAGTTGCTACATTATCATCAGTAAAGACACCACAGCTAAAGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000509018.6
ENST00000510071.5
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS CCA 72 bp CATATCTTTCTTGACAACAGGGAAGAGTGGAATAATTaGAGGCTGCATACTTTGACTACTAAGAATATTTCT +
Preference number: 6 (lower is better)
Translates to: HIFLDNREEWNN*RLHTLTTKNIS
Trigger: AGAAATATTCTTAGTAGTCAAAGTATGCAGCCTCCAATTATTCCACTCTTCCCTGTTGTCAAGAAAGATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000296859.10
ENST00000308008.10
ENST00000507093.5
ENST00000509018.6
ENST00000512052.5
ENST00000515170.5
ENST00000627212.2
ENST00000671916.1
CDS TCA 72 bp TTAATGCAAAGTAATTTGGCACATATGGTGACGTTCTaGATTAAGAACAGGATTTGGCAAAGTACAGAATTC +
Preference number: 6 (lower is better)
Translates to: LMQSNLAHMVTF*IKNRIWQSTEF
Trigger: GAATTCTGTACTTTGCCAAATCCTGTTCTTAATTCAGAACGTCACCATATGTGCCAAATTACTTTGCATTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS GCA 72 bp CATTTATATGCAATTCAATACAGTCGGACATCAGAATaGAGTAAAAACTCAATGCTTCCCTCAAATATGGAA +
Preference number: 6 (lower is better)
Translates to: HLYAIQYSRTSE*SKNSMLPSNME
Trigger: TTCCATATTTGAGGGAAGCATTGAGTTTTTACTGCATTCTGATGTCCGACTGTATTGAATTGCATATAAATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512611.5
CDS CCA 72 bp CTTGCTGCACAAGGCTTAACCATCTATTTGTTCATTTaGTACCAATACGGCAATATAAAATCACATATGAAA +
Preference number: 6 (lower is better)
Translates to: LAAQGLTIYLFI*YQYGNIKSHMK
Trigger: TTTCATATGTGATTTTATATTGCCGTATTGGTACCAAATGAACAAATAGATGGTTAAGCCTTGTGCAGCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514179.5