RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000136237

Ensembl transcript IDs: ENST00000344041.10, ENST00000401957.6, ENST00000405243.1, ENST00000420196.5, ENST00000451559.1, ENST00000458533.5, ENST00000468825.1, ENST00000471484.1, ENST00000475788.1, ENST00000488366.1, ENST00000497668.1, ENST00000620335.4, ENST00000665637.1

Found 1051 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTCTCGGTCTGAGAGCGCCGCGGCGGAATCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGCCGGGAGCTGCCCATTGTGAACGGT +
Preference number: 1 (lower is better)
Translates to: SSRSESAAAESFLSK*GSKTLSRELPIVNG
Trigger: ACCGTTCACAATGGGCAGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCGGCGCTCTCAGACCGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp GGTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGTCCACTaGGTCATCCTCGGTGGAAGACTGCGAGCGGCTGCTCCATTCATC +
Preference number: 1 (lower is better)
Translates to: GPGHHHISVREQRVH*VILGGRLRAAAPFI
Trigger: GATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR GCA 90 bp CTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCATCGTCCTCATCCTCCTCGTCGATG +
Preference number: 1 (lower is better)
Translates to: LSESRESTESSSVED*ERLLHSSSSSSSSM
Trigger: CATCGACGAGGAGGATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 90 bp CGTGAGGGAAGTCTGCTCTCCGGTTCTCACGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGCAGCATGCAGCATTTCTCTGAATGG +
Preference number: 1 (lower is better)
Translates to: REGSLLSGSHGSGVL*ATFHDGSMQHFSEW
Trigger: CCATTCAGAGAAATGCTGCATGCTGCCGTCATGGAATGTGGCCCACAGGACACCAGAGCCGTGAGAACCGGAGAGCAGACTTCCCTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 90 bp CCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGCTCCATTCATCGTCCTCATCCTCCT +
Preference number: 1 (lower is better)
Translates to: PHICQRAESPLSHPR*KTASGCSIHRPHPP
Trigger: AGGAGGATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp TTTGAAATAAGGCACATCGAAGGTAGGCAAGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATCTTTCCTCTCCAAATGAGGGTCAAA +
Preference number: 1 (lower is better)
Translates to: FEIRHIEGRQGQLSV*ERRGGIFPLQMRVK
Trigger: TTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCCTTGCCTACCTTCGATGTGCCTTATTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR GCA 90 bp AACAGTGGGAACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTaGTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTT +
Preference number: 1 (lower is better)
Translates to: NSGNLAPEGTDKGIS*YQSGSMSYSEPYLF
Trigger: AAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGTTCCCACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp CTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCATaGGCTACTCAGAGCCTTACCTGTTTCTTTGTCCTGGACTTCTTC +
Preference number: 1 (lower is better)
Translates to: LRVLTRASAAISLEA*ATQSLTCFFVLDFF
Trigger: GAAGAAGTCCAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp CTGCACTGGCTGCTGTCATTCCATAGTGTGGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTT +
Preference number: 1 (lower is better)
Translates to: LHWLLSFHSVGKEPV*GTQNASSGTRMQTF
Trigger: AAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCATACAGGCTCCTTGCCCACACTATGGAATGACAGCAGCCAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp TTAAACAAATCAGCACAAGGCAAGGGACGAGTCGCACAAAGCATATaGTATTTCTCCCCACCCCGGTTTCAGCTAACAGTGGGAACCTTG +
Preference number: 1 (lower is better)
Translates to: LNKSAQGKGRVAQSI*YFSPPRFQLTVGTL
Trigger: CAAGGTTCCCACTGTTAGCTGAAACCGGGGTGGGGAGAAATAGCATATGCTTTGTGCGACTCGTCCCTTGCCTTGTGCTGATTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp TATTCATGCAGCATCCTCTCCCTGTGGACTAGGCAGTGTGAGCACTaGCCTTATCCACATGCTTCTAAATTCGGTGTATGCTCCACACTA +
Preference number: 1 (lower is better)
Translates to: YSCSILSLWTRQCEH*PYPHASKFGVCSTL
Trigger: TAGTGTGGAGCATACACCGAATTTAGAAGCATGTGGATAAGGTCAGTGCTCACACTGCCTAGTCCACAGGGAGAGGATGCTGCATGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 90 bp GAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAGCAGTTGGTGAGTGTTTGCAATGTG +
Preference number: 1 (lower is better)
Translates to: EVRKMHHQAQECRLL*LCHLSKQLVSVCNV
Trigger: CACATTGCAAACACTCACCAACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp CAGTATCTCAAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAG +
Preference number: 1 (lower is better)
Translates to: QYLKLSVVPEPRKQH*YKDVKKHWTRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTTGAGATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp GACGGCAGCATGCAGCATTTCTCTGAATGGACCAGCCCTGGAGGATaGCCTTCTATAAAACCCTATAAATGTTCAGGACTGAAGTTTTAC +
Preference number: 1 (lower is better)
Translates to: DGSMQHFSEWTSPGG*PSIKPYKCSGLKFY
Trigger: GTAAAACTTCAGTCCTGAACATTTATAGGGTTTTATAGAAGGGCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTGCATGCTGCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 90 bp GTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTTTGTCCTaGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCAAAATC +
Preference number: 1 (lower is better)
Translates to: VWKHELLRALPVSLS*TSSRCKSFKRCSKI
Trigger: GATTTTGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp AATGTGATCATAAGAAACCAGCCTTCTCCATCTCAAGAATGCTTCTaGCTCTCCTTCTGCCTTCTTGTCCCGAGAGTAGCATGGAGAAAC +
Preference number: 1 (lower is better)
Translates to: NVIIRNQPSPSQECF*LSFCLLVPRVAWRN
Trigger: GTTTCTCCATGCTACTCTCGGGACAAGAAGGCAGAAGGAGAGTCAGAAGCATTCTTGAGATGGAGAAGGCTGGTTTCTTATGATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp TCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAACAAGATaGAAGACTTTACGTTTCCTACGCGGAACGTCTGAGTTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: SGNQSLYRAIHWETR*KTLRFLRGTSEFSS
Trigger: AGAGGAAAACTCAGACGTTCCGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR TCA 90 bp AAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAAAGGAAACAGGTCTGTGTGGGCATG +
Preference number: 1 (lower is better)
Translates to: KDVKKHWTRLSNEDE*GVDETKRKQVCVGM
Trigger: CATGCCCACACAGACCTGTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 90 bp CTGGGAAACAAGATGCAAGACTTTACGTTTCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTGATACTTCTTAGCAGAATAGTGCCT +
Preference number: 1 (lower is better)
Translates to: LGNKMQDFTFPTRNV*VFLFALILLSRIVP
Trigger: AGGCACTATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR GCA 90 bp CCAGATCTAAGATTCTGCAAAGCTTTGGAAACTTCTGAGAGCTGCTaGCTGGCAAACCTCTGGAGACAGTTGTTAAACTTCAGAAAGATG +
Preference number: 1 (lower is better)
Translates to: PDLRFCKALETSESC*LANLWRQLLNFRKM
Trigger: CATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 90 bp CTTTTGGTGATGTCACAGGTTGTATCAACAGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTCTCTGTCATCAGGTGTTCAAAAGAA +
Preference number: 1 (lower is better)
Translates to: LLVMSQVVSTETSPP*RSRDAVSVIRCSKE
Trigger: TTCTTTTGAACACCTGATGACAGAGACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTCTGTTGATACAACCTGTGACATCACCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp ATTCCAGATCTAAGATTCTGCAAAGCTTTGGAAACTTCTGAGAGCTaGTGCCTGGCAAACCTCTGGAGACAGTTGTTAAACTTCAGAAAG +
Preference number: 1 (lower is better)
Translates to: IPDLRFCKALETSES*CLANLWRQLLNFRK
Trigger: CTTTCTGAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp TCTCACAATTCGGGCTTGAATTCTTTAATTCCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCTGAGAGCTGCTGCCTGGCAAACCTC +
Preference number: 1 (lower is better)
Translates to: SHNSGLNSLIPDLRF*KALETSESCCLANL
Trigger: GAGGTTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 90 bp CAGGCTACAGTCAGAGGCCTATTCATTGGAATAACTGCTCCAGCATaGAACAAATTACAAATTCTGGTTAAGAGAAGCAAGTACTCTCCC +
Preference number: 1 (lower is better)
Translates to: QATVRGLFIGITAPA*NKLQILVKRSKYSP
Trigger: GGGAGAGTACTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAGGCCTCTGACTGTAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp AATCCAAATTTTGAAACACAGAAACAATGTCAGGATGGCCTTATATaGTTACACTGGCCAAACCTTAGTCCAGGGCATAGGAAAAAGGTG +
Preference number: 1 (lower is better)
Translates to: NPNFETQKQCQDGLI*LHWPNLSPGHRKKV
Trigger: CACCTTTTTCCTATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATTGTTTCTGTGTTTCAAAATTTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp GCTGCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTaGTTGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCA +
Preference number: 1 (lower is better)
Translates to: AAFISFSLYSYFPGS*LGSTCVHLLDLNKS
Trigger: TGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 90 bp TGTCCACCAGTGAACAGCTCAGATTCCTTAGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCACAATTCGGGCTTGAATTCTTTAATT +
Preference number: 1 (lower is better)
Translates to: CPPVNSSDSLERAFC*VISGSHNSGLNSLI
Trigger: AATTAAAGAATTCAAGCCCGAATTGTGAGAACCAGATATTACTCAACAGAAAGCTCTTTCTAAGGAATCTGAGCTGTTCACTGGTGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 90 bp ATTTTTCCTTACTGGCAAAGCAACTTCATCTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAACTAATTTCACCTGCAAGCATGTGT +
Preference number: 1 (lower is better)
Translates to: IFPYWQSNFIYLAYS*KSVVQKLISPASMC
Trigger: ACACATGCTTGCAGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGCTTTGCCAGTAAGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 90 bp TGTTTTGTTCATGTGAAGGTTGAAAGAAATCCTCTAACCAGTCCTTaGAAATATCAAGAGGTCTTATTTGCTACAGGAGCCTCAATTGGT +
Preference number: 1 (lower is better)
Translates to: CFVHVKVERNPLTSP*KYQEVLFATGASIG
Trigger: ACCAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGATATTTTCAAGGACTGGTTAGAGGATTTCTTTCAACCTTCACATGAACAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 90 bp GAACAGCTCAGATTCCTTAGAAAGAGCTTTCTGTTGAGTAATATCTaGTTCTCACAATTCGGGCTTGAATTCTTTAATTCCAGATCTAAG +
Preference number: 1 (lower is better)
Translates to: EQLRFLRKSFLLSNI*FSQFGLEFFNSRSK
Trigger: CTTAGATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGAACCAGATATTACTCAACAGAAAGCTCTTTCTAAGGAATCTGAGCTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCAGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATC +
Preference number: 2 (lower is better)
Translates to: TLPLRVLTRASAAISLEAGQLSV*ERRGGI
Trigger: GATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCC...TGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGC +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLGSGVL*ATFHDG
Trigger: GCCGTCATGGAATGTGGCCCACAGGACACCAGAGCC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp GCCCATGCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGGGAAGTCTGCTCTCCGGTTCTCACG +
Preference number: 2 (lower is better)
Translates to: AHAIVSNCVRRALEG*LSPAVREVCSPVLT
Trigger: CGTGAGAACCGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp ACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCACTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: TLPLRVLTRASAAISLEALSHPR*KTASGC
Trigger: GCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAG...TGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACG +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAPLSGG*HHFLNT
Trigger: CGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCGGTTCTCACGGCTCTaGTGTCCTGTGGGCCACATT +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARFSRL*CPVGHI
Trigger: AATGTGGCCCACAGGACACCAGAGCCGTGAGAACCG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLNRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTGCTCAGCCCAGCCGTaGGGGAAGTCTGCTCTCCGG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFCSAQP*GKSALR
Trigger: CCGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCA +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLGKEPV*GTQNAS
Trigger: TGATGCATTTTGCGTACCTCATACAGGCTCCTTGCC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGGCATAGGAAAAAGGTaGGAACACGTGCTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLGIGKR*EHVLVL
Trigger: CAGCACAAGCACGTGTTCTCACCTTTTTCCTATGCC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAATTTCAGCACGGAGGCTaGTGCCCCCAGCTCAGCACT +
Preference number: 2 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEFQHGG*CPQLST
Trigger: AGTGCTGAGCTGGGGGCAGCAGCCTCCGTGCTGAAA...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAATGCCTACATGCCAGGTaGACGCCTGCTAACCCTCCT +
Preference number: 2 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLECLHAR*TPANPP
Trigger: AGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCA...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHARSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGAGAACACGTGCTTGTaGTGTAAGCCCATGCTATTG +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLENTCL*CKPMLL
Trigger: CAATAGCATGGGCTTACAGCACAAGCACGTGTTCTC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCCCTGCACCACCTGGTaGCGAAGGTGCCAGATTACG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFPCTTW*RRCQIT
Trigger: CGTAATCTGGCACCTTCGGCACCAGGTGGTGCAGGG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGCCTGGCAAACCTCTaGAGACAGTTGTTAAACTTC +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCLANL*RQLLNF
Trigger: GAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGTGGGCCACATTCCATaGCGGCAGCATGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFVGHIP*RQHAAF
Trigger: AAATGCTGCATGCTGCCGTCATGGAATGTGGCCCAC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEKTASG*SIHRPH
Trigger: ATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTT...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp ACAGCTGCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTTGTCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCA +
Preference number: 2 (lower is better)
Translates to: TAAFISFSLYSYFPGSCLSSVED*ERLLHS
Trigger: TGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGA...CAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: CIIRHKNADFCDSVTSASVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCAC +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLERAFC*VISGSH
Trigger: GTGAGAACCAGATATTACTCAACAGAAAGCTCTTTC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYTSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCA +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFGKEPV*GTQNAS
Trigger: TGATGCATTTTGCGTACCTCATACAGGCTCCTTGCC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATAAATGTTCAGGACTaGAGTTTTACATGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAINVQD*SFTCWA
Trigger: GGCCCAGCATGTAAAACTTCAGTCCTGAACATTTAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTTGTTAGTAACTGCGTaGGGAGGGCTTTGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLLVTA*GGLWRV
Trigger: AACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAGCTTTGGAAACTTCTaGGAGCTGCTGCCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFSFGNF*ELLPGK
Trigger: TTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 2 (lower is better)
Translates to: CIIRHKNADFCDSVTSASGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp CTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTTaGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: LSVWKHELLRALPVS*SWTSSRCKSFKRCS
Trigger: GGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCA +
Preference number: 2 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKGKEPV*GTQNAS
Trigger: TGATGCATTTTGCGTACCTCATACAGGCTCCTTGCC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCCTGCATTTGGAAAATaGATGGACCAGGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYPAFGK*MDQALA
Trigger: TGCAAGGGCCTGGTCCATTCATTTTCCAAATGCAGG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGINRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAA +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHASNEDE*GVDETK
Trigger: TTTTGTCTCATCAACGCCTCATTCATCCTCATTACT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAA +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFTHRTV*ELCCNK
Trigger: TTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ACAGCTGCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTTGTCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGC +
Preference number: 2 (lower is better)
Translates to: TAAFISFSLYSYFPGSCLSFLSK*GSKTLS
Trigger: GCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGA...CAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGCTATTGTTAGTAACTaGGTGAGGAGGGCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFAIVSN*VRRALE
Trigger: CTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ACAGCTGCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTTGGACAAGGGCATCAGCTaGTATCAGTCTGGAAGCATG +
Preference number: 2 (lower is better)
Translates to: TAAFISFSLYSYFPGSCLDKGIS*YQSGSM
Trigger: CATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTC...CAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATCTCCCCCTCTCTGGTaGCTGACATCACTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISPPLW*LTSLPE
Trigger: TTCAGGAAGTGATGTCAGCCACCAGAGAGGGGGAGA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRTSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCTCCCTAGACACAAGTaGCTTTTGGTGATGTCACAG +
Preference number: 2 (lower is better)
Translates to: CIIRHKNADFCDSVTSASLPRHK*LLVMSQ
Trigger: CTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSLPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp AGCTACTTCCCAGGGAGCTGCTTGGGATCTACATGTGTCCATTTATaGGATTTAAACAAATCAGCACAAGGCAAGGGACGAGTCGCACAA +
Preference number: 2 (lower is better)
Translates to: SYFPGSCLGSTCVHL*DLNKSAQGKGRVAQ
Trigger: TTGTGCGACTCGTCCCTTGCCTTGTGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRNRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHALLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCTCCCCCTCTCTGGTaGCTGACATCACTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSPPLW*LTSLPE
Trigger: TTCAGGAAGTGATGTCAGCCACCAGAGAGGGGGAGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCTCCCTAGACACAAGTaGCTTTTGGTGATGTCACAG +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLPRHK*LLVMSQ
Trigger: CTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGTCATTCCATAGTGTaGGCAAGGAGCCTGTATGAG +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYCHSIV*ARSLYE
Trigger: CTCATACAGGCTCCTTGCCCACACTATGGAATGACA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp TCGGGCTTGAATTCTTTAATTCCAGATCTAAGATTCTGCAAAGCTTaGGAAACTTCTGAGAGCTGCTGCCTGGCAAACCTCTGGAGACAG +
Preference number: 2 (lower is better)
Translates to: SGLNSLIPDLRFCKA*ETSESCCLANLWRQ
Trigger: CTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGGAATTAAAGAATTCAAGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACG +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPPLSGG*HHFLNT
Trigger: CGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCTGCATTTGGAAAATaGATGGACCAGGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPAFGK*MDQALA
Trigger: TGCAAGGGCCTGGTCCATTCATTTTCCAAATGCAGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDENRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAEIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAAACTAATTTCACCTaGAAGCATGTGTCAATAGTT +
Preference number: 2 (lower is better)
Translates to: VASSGLVGISDLGSEQHAETNFT*KHVSIV
Trigger: AACTATTGACACATGCTTGCAGGTGAAATTAGTTTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAAAGCAAATCTTGACTaGACAAAATCCTCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFKANLD*TKSSLP
Trigger: GGGAAGGGAGGATTTTGTGCAGTCAAGATTTGCTTT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTATACTTCCCAGGGAGCTaGTTGGGATCTACATGTGTC +
Preference number: 2 (lower is better)
Translates to: CILVKGSSCKMQATVRGLYFPGS*LGSTCV
Trigger: GACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTA...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATTCCCAGGGAGCTGCTTaGGATCTACATGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNSQGAA*DLHVSI
Trigger: AATGGACACATGTAGATCCCAAGCAGCTCCCTGGGA...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSTSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYTSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGCATGTGTCAATAGTTaGTTGTGGTGCAAAGTGATG +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSACVNS*LWCKVM
Trigger: CATCACTTTGCACCACAATCAACTATTGACACATGC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAA +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFSNEDE*GVDETK
Trigger: TTTTGTCTCATCAACGCCTCATTCATCCTCATTACT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRLTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATCAGCTGCTATCAGTCTaGAAGCATGAGCTACTCAGA +
Preference number: 2 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNQLLSV*KHELLR
Trigger: TCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTG...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 2 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCCTCTAACCAGTCCTTaGAAATATCAAGAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYPLTSP*KYQEVL
Trigger: TAAGACCTCTTGATATTTTCAAGGACTGGTTAGAGG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATCCTCGTCGATGTATTTaGAATAAGGCACATCGAAGG +
Preference number: 2 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNPRRCI*NKAHRR
Trigger: CCTTCGATGTGCCTTATTTCAAATACATCGACGAGG...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCCCGTAGCTCAAAGTaGTGCAGATACAGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSRSSK*CRYRGG
Trigger: ACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ACAAGAAGTCTGATCGATAAGGCTTTAGTGCATTACAGTTTCTGCTCTGAAAAGGTGAGTATCATAGTCTaGACCTCGGGGCTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: TRSLIDKALVHYSFCSEKVSIIV*TSGLVL
Trigger: CAGAACAAGCCCCGAGGTGCAGACTATGATACTCAC...CTTTTCAGAGCAGAAACTGTAATGCACTAAAGCCTTATCGATCAGACTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp ACATCACTTCCTGAACACGCTTTGGCTGGCTTTCCTGTGAATGTCTaGGGTTATACTGATAAAACTCAGCAACTTCTTTTCTCACAGGAA +
Preference number: 2 (lower is better)
Translates to: TSLPEHALAGFPVNV*GYTDKTQQLLFSQE
Trigger: TTCCTGTGAGAAAAGAAGTTGCTGAGTTTTATCAGTATAACCCAAGACATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp ACATCACCTATGTTCAGACAAAACTCCAGGGACACAAGGAAATTCTaGTTCCCACCTAAGCTGTCATTTCACAATCCTTCTTGCATGGTA +
Preference number: 2 (lower is better)
Translates to: TSPMFRQNSRDTRKF*FPPKLSFHNPSCMV
Trigger: TACCATGCAAGAAGGATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTTTTGTCTGAACATAGGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 2 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 2 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSTSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp TATTGTCCTTTAGAATGCAAAATAGACCCAGACATCACCTATGTTCAGACAAAAGGGAGCTGCCCATTGTaGACGGTTACTAACAAAGGC +
Preference number: 2 (lower is better)
Translates to: YCPLECKIDPDITYVQTKGSCPL*TVTNKG
Trigger: GCCTTTGTTAGTAACCGTTCACAATGGGCAGCTCCC...TTTTGTCTGAACATAGGTGATGTCTGGGTCTATTTTGCATTCTAAAGGACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTAAAGTACTCTCCCTTCTaGGATAAAGGAAGTTACAGG +
Preference number: 2 (lower is better)
Translates to: CILVKGSSCKMQATVRGLKYSPF*DKGSYR
Trigger: CCTGTAACTTCCTTTATCTCAGAAGGGAGAGTACTT...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp AATATTCATCTACAGTGTGACGACGGTGCATTCCAAGTATCTTTTGAAATTCTTCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTG +
Preference number: 2 (lower is better)
Translates to: NIHLQCDDGAFQVSFEILPTRNV*VFLFAL
Trigger: CAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGG...AAGAATTTCAAAAGATACTTGGAATGCACCGTCGTCACACTGTAGATGAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGAAACTAATTTCACCTaGAAGCATGTGTCAATAGTT +
Preference number: 2 (lower is better)
Translates to: CIIRHKNADFCDSVTSASETNFT*KHVSIV
Trigger: AACTATTGACACATGCTTGCAGGTGAAATTAGTTTC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGGTCGCACAAAGCATATaGTATTTCTCCCCACCCCGG +
Preference number: 2 (lower is better)
Translates to: LFIGITAPAWNKLQILVKVAQSI*YFSPPR
Trigger: CCGGGGTGGGGAGAAATAGCATATGCTTTGTGCGAC...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGCATGTGTCAATAGTTaGTTGTGGTGCAAAGTGATG +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEACVNS*LWCKVM
Trigger: CATCACTTTGCACCACAATCAACTATTGACACATGC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCTCTAACCAGTCCTTaGAAATATCAAGAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPLTSP*KYQEVL
Trigger: TAAGACCTCTTGATATTTTCAAGGACTGGTTAGAGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGAAACTAATTTCACCTaGAAGCATGTGTCAATAGTT +
Preference number: 2 (lower is better)
Translates to: IIRHKNADFCDSVTSASSETNFT*KHVSIV
Trigger: AACTATTGACACATGCTTGCAGGTGAAATTAGTTTC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp ACAAGAAGTCTGATCGATAAGGCTTTAGTGCATTACAGTTTCTGCTCTGAAAAGTGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: TRSLIDKALVHYSFCSEKWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...CTTTTCAGAGCAGAAACTGTAATGCACTAAAGCCTTATCGATCAGACTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTCCCTAGACACAAGTaGCTTTTGGTGATGTCACAG +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLPRHK*LLVMSQ
Trigger: CTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 90 bp GCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTaGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCA +
Preference number: 2 (lower is better)
Translates to: AFISFSLYSYFPGSC*GSTCVHLLDLNKSA
Trigger: TGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCTCTAACCAGTCCTTaGAAATATCAAGAGGTCTTA +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPLTSP*KYQEVL
Trigger: TAAGACCTCTTGATATTTTCAAGGACTGGTTAGAGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIEIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 2 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AATATTCATCTACAGTGTGACGACGGTGCATTCCAAGTATCTTTTGAAATTCTTTGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 2 (lower is better)
Translates to: NIHLQCDDGAFQVSFEILCLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...AAGAATTTCAAAAGATACTTGGAATGCACCGTCGTCACACTGTAGATGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: NSTAIKMSKSIGHASVMREIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CCA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATATAACTGCTCCAGCATaGAACAAATTACAAATTCTG +
Preference number: 2 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNITAPA*NKLQIL
Trigger: CAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTAT...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CAA 90 bp CTTAATGAAATATTTGGTCATTGCATGTCAAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATATTGAAAACTGGACTGGATCAACAA +
Preference number: 2 (lower is better)
Translates to: LNEIFGHCMSRRCLV*MLAHLILKTGLDQQ
Trigger: TTGTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAGCATCAAGACAAGACAACGTCTTGACATGCAATGACCAAATATTTCATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGAAACTAATTTCACCTaGAAGCATGTGTCAATAGTT +
Preference number: 2 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEETNFT*KHVSIV
Trigger: AACTATTGACACATGCTTGCAGGTGAAATTAGTTTC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR GCA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGAAGTCATTCAAAAGGTaGTCCAAAATCTTCTCCGGG +
Preference number: 2 (lower is better)
Translates to: LFIGITAPAWNKLQILVKKSFKR*SKIFSG
Trigger: CCCGGAGAAGATTTTGGAGCACCTTTTGAATGACTT...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR GCA 90 bp TATTGTCCTTTAGAATGCAAAATAGACCCAGACATCACCTATGTTCAGACAAAAATTCATTGGAATAACTaGTCCAGCATGGAACAAATT +
Preference number: 2 (lower is better)
Translates to: YCPLECKIDPDITYVQTKIHWNN*SSMEQI
Trigger: AATTTGTTCCATGCTGGAGCAGTTATTCCAATGAAT...TTTTGTCTGAACATAGGTGATGTCTGGGTCTATTTTGCATTCTAAAGGACAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 72 bp TCTGAGAGCGCCGCGGCGGAATCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGCCGGGAGCTGCCCATT +
Preference number: 3 (lower is better)
Translates to: SESAAAESFLSK*GSKTLSRELPI
Trigger: AATGGGCAGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCGGCGCTCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 72 bp AGGCACATCGAAGGTAGGCAAGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATCTTTCCTCTCCAAATG +
Preference number: 3 (lower is better)
Translates to: RHIEGRQGQLSV*ERRGGIFPLQM
Trigger: CATTTGGAGAGGAAAGATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCCTTGCCTACCTTCGATGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGG +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHARALEG*LSPAVR
Trigger: CCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 72 bp CCACTGAGTCATCCTCGGTGGAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCATCCTCCTCGTCGATGT +
Preference number: 3 (lower is better)
Translates to: PLSHPRWKTASG*SIHRPHPPRRC
Trigger: ACATCGACGAGGAGGATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR GCA 72 bp AGCAGAGAGTCCACTGAGTCATCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCATCGTCCTCATCCTCC +
Preference number: 3 (lower is better)
Translates to: SRESTESSSVED*ERLLHSSSSSS
Trigger: GGAGGATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 72 bp AGTCTGCTCTCCGGTTCTCACGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGCAGCATGCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: SLLSGSHGSGVL*ATFHDGSMQHF
Trigger: GAAATGCTGCATGCTGCCGTCATGGAATGTGGCCCACAGGACACCAGAGCCGTGAGAACCGGAGAGCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHACVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTGGGCATATCTGACTaGGGGTCTGAGCAGCATGCA +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVGISD*GSEQHA
Trigger: TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp TGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGCTCCATTCATCGTCCT +
Preference number: 3 (lower is better)
Translates to: CQRAESPLSHPR*KTASGCSIHRP
Trigger: AGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp AGTAGCATGGAGAAACCTCTCCCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACGCTTTGGCTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: SSMEKPLPLSGG*HHFLNTLWLAF
Trigger: GAAAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGTTTCTCCATGCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp TTGTGCTGTAAGCCCATGCTATTGTTAGTAACTGCGTaGGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCG +
Preference number: 3 (lower is better)
Translates to: LCCKPMLLLVTA*GGLWRVCSAQP
Trigger: CGGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGCATGGGCTTACAGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 72 bp AACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTaGTATCAGTCTGGAAGCATGAGCTACTCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: NLAPEGTDKGIS*YQSGSMSYSEP
Trigger: AGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCAGTTGGTGAGTGTTaGCAATGTGTCAGGCACTGT +
Preference number: 3 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAAVGEC*QCVRHC
Trigger: ACAGTGCCTGACACATTGCAAACACTCACCAACTGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGGTGAGAACACGTGCTaGTGCTGTAAGCCCATGCTA +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHAGENTC*CCKPML
Trigger: TAGCATGGGCTTACAGCACAAGCACGTGTTCTCACC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 72 bp TCAGCACAAGGCAAGGGACGAGTCGCACAAAGCATATaGTATTTCTCCCCACCCCGGTTTCAGCTAACAGTG +
Preference number: 3 (lower is better)
Translates to: SAQGKGRVAQSI*YFSPPRFQLTV
Trigger: CACTGTTAGCTGAAACCGGGGTGGGGAGAAATAGCATATGCTTTGTGCGACTCGTCCCTTGCCTTGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHALPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHAEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHALHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAGGATGAATGAGGCGTaGATGAGACAAAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLRMNEA*MRQKGN
Trigger: GTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: NVRMALYDYTGQTLVQGICVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAATGGAAAAGCAAATCTaGACTGCACAAAATCCTCCC +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLMEKQI*TAQNPP
Trigger: GGGAGGATTTTGTGCAGTCAAGATTTGCTTTTCCAT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAAAAGGCAGAAGTTGCCTAACAGTGGGAACCTaGCCCCTGAGGGTACTGACA +
Preference number: 3 (lower is better)
Translates to: GLVLTRQFVNHLEKGRSCLTVGT*PLRVLT
Trigger: TGTCAGTACCCTCAGGGGCAAGGTTCCCACTGTTAG...GCAACTTCTGCCTTTTTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 72 bp GCACACCTTGACATTGTTCATCTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTCACTAACTCCCTAGAC +
Preference number: 3 (lower is better)
Translates to: AHLDIVHLPIRA*MLAAVLTNSLD
Trigger: GTCTAGGGAGTTAGTGAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAGATGAACAATGTCAAGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHAATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 3 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp CTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCATaGGCTACTCAGAGCCTTACCTGTTTCTTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: LTRASAAISLEA*ATQSLTCFFVL
Trigger: CAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 72 bp GCTTCACTCATTAAATGTCACTTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGTGTGGGCAAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: ASLIKCHLTSLH*LLSFHSVGKEP
Trigger: AGGCTCCTTGCCCACACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAAGTGACATTTAATGAGTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 3 (lower is better)
Translates to: CIIRHKNADFCDSVTSASLPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTACAGGAGCCTCAATaGGTAAAAATGGGAATAATA +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLQEPQ*VKMGII
Trigger: TATTATTCCCATTTTTACCAATTGAGGCTCCTGTAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGGATGAATGAGGCGTaGATGAGACAAAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHARMNEA*MRQKGN
Trigger: GTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATCTCACAATTCGGGCTaGAATTCTTTAATTCCAGAT +
Preference number: 3 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLSHNSG*NSLIPD
Trigger: ATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAGCAAGGTTGTGATTTaGCCTACGGGGTCCTGCATT +
Preference number: 3 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFSKVVI*PTGSCI
Trigger: AATGCAGGACCCCGTAGGCAAAATCACAACCTTGCT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp CTGCTGTCATTCCATAGTGTGGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCATCAGGCACAAGAATG +
Preference number: 3 (lower is better)
Translates to: LLSFHSVGKEPV*GTQNASSGTRM
Trigger: CATTCTTGTGCCTGATGATGCATTTTGCGTACCTCATACAGGCTCCTTGCCCACACTATGGAATGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp AGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTaGTACTCTCTCTTTCATGCCACGATTTCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: SESPAPGIRSHH*YSLFHATISPP
Trigger: TGGAGGAGAAATCGTGGCATGAAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 3 (lower is better)
Translates to: CIIRHKNADFCDSVTSASMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 3 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 3 (lower is better)
Translates to: IIRHKNADFCDSVTSASSMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGTGGATTTCATTATTTaGACCCATAGGCTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: VASSGLVGISDLGSEQHAVDFII*THRLFC
Trigger: ACAAAACAGCCTATGGGTCAAAATAATGAAATCCAC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 3 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 3 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp GTCCTCACTAACTCCCTAGACACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAACAGAAACCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: VLTNSLDTSGFW*CHRLYQQKPLL
Trigger: GAGGAGAGGTTTCTGTTGATACAACCTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAGTTAGTGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp GACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTGGTaGGTGTTTGCAATGTGTCAGGCACTGTGCTTTTTC +
Preference number: 3 (lower is better)
Translates to: DFCDSVTSASSW*VFAMCQALCFF
Trigger: GAAAAAGCACAGTGCCTGACACATTGCAAACACTCACCAACTGCTTGCTGAGGTGACAGAGTCACAAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp GGAATGCTGACGAATCCAAAGACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAAAAGAGCCCACTTAGA +
Preference number: 3 (lower is better)
Translates to: GMLTNPKTHRTV*ELCCNKKSPLR
Trigger: TCTAAGTGGGCTCTTTTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGTCTTTGGATTCGTCAGCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp TCAGCAACTTCTTTTCTCACAGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGCTCAAAGTGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SATSFLTGKQRA*HRHSRSSKCCR
Trigger: TCTGCAGCACTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGAAGTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp ATGTCACAGGTTGTATCAACAGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTCTCTGTCATCAGGTGT +
Preference number: 3 (lower is better)
Translates to: MSQVVSTETSPP*RSRDAVSVIRC
Trigger: ACACCTGATGACAGAGACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTCTGTTGATACAACCTGTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp CATGAGCTACTCAGAGCCTTACCTGTTTCTTTGTCCTaGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGC +
Preference number: 3 (lower is better)
Translates to: HELLRALPVSLS*TSSRCKSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 3 (lower is better)
Translates to: CIIRHKNADFCDSVTSASLAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 3 (lower is better)
Translates to: IIRHKNADFCDSVTSASSRRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGCAGTTGGTGAGTGTTaGCAATGTGTCAGGCACTGT +
Preference number: 3 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSAVGEC*QCVRHC
Trigger: ACAGTGCCTGACACATTGCAAACACTCACCAACTGC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp TTGGAAACTTCTGAGAGCTGCTGCCTGGCAAACCTCTaGAGACAGTTGTTAAACTTCAGAAAGATGCAGAGA +
Preference number: 3 (lower is better)
Translates to: LETSESCCLANL*RQLLNFRKMQR
Trigger: TCTCTGCATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 3 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 3 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 3 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 3 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 3 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 3 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGGATGAATGAGGCGTaGATGAGACAAAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYRMNEA*MRQKGN
Trigger: GTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GGGAGCTGCTTGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCAGCCTTACCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: GSCLGSTCVHLLDLNKSAALPVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGC...TGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR TCA 72 bp AAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAGCAGTTGGTGAGTGTT +
Preference number: 3 (lower is better)
Translates to: KMHHQAQECRLL*LCHLSKQLVSV
Trigger: AACACTCACCAACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 72 bp TGTGGGTCTCACAGGTGCTATGGTAGGAGCAAACAGTaGATTTTAGTTAAGGGATCAAGTTGCAAAATGCAG +
Preference number: 3 (lower is better)
Translates to: CGSHRCYGRSKQ*ILVKGSSCKMQ
Trigger: CTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCTCCTACCATAGCACCTGTGAGACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 3 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp AAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAAAGGAAACAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: KKHWTRLSNEDE*GVDETKRKQVC
Trigger: ACAGACCTGTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR TCA 72 bp AAGATGCAAGACTTTACGTTTCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTGATACTTCTTAGCAGA +
Preference number: 3 (lower is better)
Translates to: KMQDFTFPTRNV*VFLFALILLSR
Trigger: TCTGCTAAGAAGTATCAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGGAAACGTAAAGTCTTGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR GCA 72 bp TCGGGCTTGAATTCTTTAATTCCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCTGAGAGCTGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SGLNSLIPDLRF*KALETSESCCL
Trigger: CAGGCAGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGGAATTAAAGAATTCAAGCCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 3 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDERHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 3 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCTACAGGAGCCTCAATaGGTAAAAATGGGAATAATA +
Preference number: 3 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRLQEPQ*VKMGII
Trigger: TATTATTCCCATTTTTACCAATTGAGGCTCCTGTAG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR-3UTR CAA 90 bp GAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAACAGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 3 (lower is better)
Translates to: ECSSSGNQSLYRAIHWETVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...TGTTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
3UTR TCA 72 bp GTGAACAGCTCAGATTCCTTAGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCACAATTCGGGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: VNSSDSLERAFC*VISGSHNSGLN
Trigger: ATTCAAGCCCGAATTGTGAGAACCAGATATTACTCAACAGAAAGCTCTTTCTAAGGAATCTGAGCTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR GCA 72 bp TACTGGCAAAGCAACTTCATCTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAACTAATTTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: YWQSNFIYLAYS*KSVVQKLISPA
Trigger: TGCAGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGCTTTGCCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CCA 72 bp GTCAGAGGCCTATTCATTGGAATAACTGCTCCAGCATaGAACAAATTACAAATTCTGGTTAAGAGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: VRGLFIGITAPA*NKLQILVKRSK
Trigger: CTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAGGCCTCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 72 bp TTGCAAAATGCAGGCTACAGTCAGAGGCCTATTCATTaGAATAACTGCTCCAGCATGGAACAAATTACAAAT +
Preference number: 3 (lower is better)
Translates to: LQNAGYSQRPIH*NNCSSMEQITN
Trigger: ATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAGGCCTCTGACTGTAGCCTGCATTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR GCA 72 bp ATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTaGTTGGGATCTACATGTGTCCATTTATTGGATTTA +
Preference number: 3 (lower is better)
Translates to: ISFSLYSYFPGS*LGSTCVHLLDL
Trigger: TAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR-3UTR CAA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGTTCATATCATTTTCTTaGTACAGCTACTTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: LFIGITAPAWNKLQILVKFISFS*YSYFPG
Trigger: CCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAA...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CCA 72 bp AGATTCCTTAGAAAGAGCTTTCTGTTGAGTAATATCTaGTTCTCACAATTCGGGCTTGAATTCTTTAATTCC +
Preference number: 3 (lower is better)
Translates to: RFLRKSFLLSNI*FSQFGLEFFNS
Trigger: GGAATTAAAGAATTCAAGCCCGAATTGTGAGAACCAGATATTACTCAACAGAAAGCTCTTTCTAAGGAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLASSAA*ARSAAA
Trigger: CGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCCACGGCCATCCTCATaGCCTGACGGCGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAPRPSS*PDGAAA
Trigger: CGCCGCAGCGCCGTCAGGGCATGAGGATGGCCGTGG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGCTCAGCCCAGCCGTaGGGGAAGTCTGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCSAQP*GKSALR
Trigger: CCGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGGGGAGGTGAGGCAGTaGGGCTCACACCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAGEVRQ*GSHPRL
Trigger: GAGCCTCGGGTGTGAGCCCCACTGCCTCACCTCCCC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTGCTCAGCCCAGCCGTaGGGGAAGTCTGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPACSAQP*GKSALR
Trigger: CCGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTGGAAGACCCACGGCCATCCTCATaGCCTGACGGCGCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: TTYLSESRESTESSSVEDPRPSS*PDGAAA
Trigger: CGCCGCAGCGCCGTCAGGGCATGAGGATGGCCGTGG...GTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGGGGAGGTGAGGCAGTaGGGCTCACACCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAGEVRQ*GSHPRL
Trigger: GAGCCTCGGGTGTGAGCCCCACTGCCTCACCTCCCC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFASSAA*ARSAAA
Trigger: CGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATC +
Preference number: 4 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEGQLSV*ERRGGI
Trigger: GATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCC...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp GCCTTACCTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGGCCATCCTCATGCCCTaGCGGCGCTGCGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ALPVSLSWTSSRCKSFKRAILMP*RRCGAG
Trigger: CCCGGCGCCGCAGCGCCGTCAGGGCATGAGGATGGC...CCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp CGCGGCGGAATCTTTCCTCTCCAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTGCTGGGCCACAGCACTaGACTTTCTTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RGGIFPLQMRVKDPQPGAAGPQH*TFFSTR
Trigger: CCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCAGC...AGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCTTGCCCAGCTGGCTaGAGAGCAGAATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLACPAG*RAESPW
Trigger: CCACGGAGATTCTGCTCTGCAGCCAGCTGGGCAAGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACCTGTGTTGGACCACTaGGGAAGACCCGATCGTCCC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLPVLDH*GRPDRP
Trigger: GGGACGATCGGGTCTTCCGCAGTGGTCCAACACAGG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGCCCCTGCACCACCTaGTGCCGAAGGTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCPCTT*CRRCQI
Trigger: AATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLPLSGG*HHFLNT
Trigger: CGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFGQLSV*ERRGGI
Trigger: GATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp CGCGGCGGAATCTTTCCTCTCCAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTGCTGCTAGCTCTCTCTaGACCGCAGATGTTAGACGC +
Preference number: 4 (lower is better)
Translates to: RGGIFPLQMRVKDPQPGAAASSL*TADVRR
Trigger: GCGTCTAACATCTGCGGTGCAGAGAGAGCTAGCAGC...AGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCCTGTGTTGGACCACTaGGGAAGACCCGATCGTCCC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAPVLDH*GRPDRP
Trigger: GGGACGATCGGGTCTTCCGCAGTGGTCCAACACAGG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAACTCGCTTGCCCAGCTaGCTGCAGAGCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLTRLPS*LQSRIS
Trigger: GGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAGT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAGSGVL*ATFHDG
Trigger: GCCGTCATGGAATGTGGCCCACAGGACACCAGAGCC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALSHPR*KTASGC
Trigger: GCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTGGGCCACATTCCATaGCGGCAGCATGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVGHIP*RQHAAF
Trigger: AAATGCTGCATGCTGCCGTCATGGAATGTGGCCCAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKGQLSV*ERRGGI
Trigger: GATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCTGCTAGCTCTCTCTaGACCGCAGATGTTAGACGC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLAASSL*TADVRR
Trigger: GCGTCTAACATCTGCGGTGCAGAGAGAGCTAGCAGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp ATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGGGAAGTCTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: IVSNCVRRALEG*LSPAVREVCSP
Trigger: CGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp GCCCATGCTATTGTTAGTAACTGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCAGCCGTGAGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AHAIVSNCVRRA*EGLLSPAVREV
Trigger: GACTTCCCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGGCTCGATCCTGTGTaGGAGCTCAAACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARLDPV*ELKQSL
Trigger: CAGGCTCTGTTTGAGCTCTCACACAGGATCGAGCCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CGCGGCGGAATCTTTCCTCTCCAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTTCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGGIFPLQMRVKDPQPGASFLSK*GSKTLS
Trigger: GCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGA...AGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGCCATCCTCATGCCCTaGCGGCGCTGCGGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEAILMP*RRCGAG
Trigger: CCCGGCGCCGCAGCGCCGTCAGGGCATGAGGATGGC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTACGGCGGCTGCATCTTaGCGGAGCCCACGGCCATCC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSTAAAS*RSPRPS
Trigger: GGATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665637.1
CDS-3UTR TCA 90 bp AAAATCTTCTCCGGGGTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGTGCCTACATGCCAGGTaGACGCCTGCTAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: KIFSGVPDTTTYLSESRECLHAR*TPANPP
Trigger: AGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCA...CTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGACCCCGGAGAAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGATCTGCGGTGTCTGTaGTGGCTAGAACAGACTCGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPADLRCL*WLEQTR
Trigger: GCGAGTCTGTTCTAGCCAGCACAGACACCGCAGATC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ACTGCCTACATGCCAGGTGAACGCCTGCTAACCCTCCTCCTCCTTGTATTTCTTTTTCAGCACGGAGGCTaGTGCCCCCAGCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: TAYMPGERLLTLLLLVFLFQHGG*CPQLST
Trigger: AGTGCTGAGCTGGGGGCAGCAGCCTCCGTGCTGAAA...AAGAAATACAAGGAGGAGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGCTTGCCCAGCTGGCTaGAGAGCAGAATCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAACPAG*RAESLG
Trigger: CCCAAGAGATTCTGCTCTGCAGCCAGCTGGGCAAGC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620335.4
CDS-3UTR CCA 90 bp GCCTTACCTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGCCGCACTCCCAGCTGTaGGGGCTGGGCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: ALPVSLSWTSSRCKSFKRPHSQL*GLGHST
Trigger: AGTGCTGTGGCCCAGCCCCCACAGCTGGGAGTGCGG...CCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGGGGAGGTGAGGCAGTaGGGCTCACACCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKGEVRQ*GSHPRL
Trigger: GAGCCTCGGGTGTGAGCCCCACTGCCTCACCTCCCC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGAGAGCGAGTGAGATaGAGCAAGGGAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARERVR*SKGREG
Trigger: GCCTTCCCTTCCCTTGCTCCATCTCACTCGCTCTCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR CCA 90 bp AAAATCTTCTCCGGGGTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGGCTAGAACGCTCCAATaGCTCTCCGCACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KIFSGVPDTTTYLSESREARTLQ*LSALPA
Trigger: AGCTGGGAGTGCGGAGAGCCATTGGAGCGTTCTAGC...CTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGACCCCGGAGAAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp CCACTGAGTCATCCTCGGTGGAAGACTGCGAGCGGCTGCTCCATTCATCGTCCTTCCCAGGGAGCTGCTTaGGATCTACATGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PLSHPRWKTASGCSIHRPSQGAA*DLHVSI
Trigger: AATGGACACATGTAGATCCCAAGCAGCTCCCTGGGA...AGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AGCAAACAGTGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SKQCILVKGSSCKMQATVASSAA*ARSAAA
Trigger: CGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGC...GACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGTGGGCCACATTCCATaGCGGCAGCATGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAVGHIP*RQHAAF
Trigger: AAATGCTGCATGCTGCCGTCATGGAATGTGGCCCAC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATGCTCAGCCCAGCCGTaGGGGAAGTCTGCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKCSAQP*GKSALR
Trigger: CCGGAGAGCAGACTTCCCTCACGGCTGGGCTGAGCA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAGGCAGTGTGAGCACTaGCCTTATCCACATGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLRQCEH*PYPHAS
Trigger: AGAAGCATGTGGATAAGGTCAGTGCTCACACTGCCT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ACCAGTCTTTGTACAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTGGGCAGCTCTCGGTCTaGGAGCGCCGCGGCGGAATC +
Preference number: 4 (lower is better)
Translates to: TSLCTEQSTGKQDARLYVGQLSV*ERRGGI
Trigger: GATTCCGCCGCGGCGCTCTCAGACCGAGAGCTGCCC...AACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTGTACAAAGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCCCGTAGCTCAAAGTaGTGCAGATACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASRSSK*CRYRGG
Trigger: ACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACGGGGTCCTGCATTCTaGTGTCTTGTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLRGPAF*CLVLTS
Trigger: AGAAGTTAGCACAAGACAGCAGAATGCAGGACCCCG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ACTGCCTACATGCCAGGTGAACGCCTGCTAACCCTCCTCCTCCTTGTATTTCTTTCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: TAYMPGERLLTLLLLVFLSSVED*ERLLHS
Trigger: TGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGA...AAGAAATACAAGGAGGAGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCTCTCGCACGGCGGCTaGATCTTGACGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLSHGG*ILTEPT
Trigger: CGTGGGCTCCGTCAAGATGCAGCCGCCGTGCGAGAG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGAGCAGAATCTCCGTaGCCACCCAAAGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHARAESP*PPKAGP
Trigger: AGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCTCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTCCCCCTCTCTGGTaGCTGACATCACTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASPPLW*LTSLPE
Trigger: TTCAGGAAGTGATGTCAGCCACCAGAGAGGGGGAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCACAGACTCGCAGGGCTaGGATATGGGTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPATDSQG*DMGSSE
Trigger: TTCACTGCTACCCATATCCCAGCCCTGCGAGTCTGT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAAAAGGCAGAAGTTGCCCAGTCTACCAGCTCTaGCCCAACGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLVLTRQFVNHLEKGRSCPVYQL*PNAAPP
Trigger: AGGAGGAGCTGCGTTGGGTCAGAGCTGGTAGACTGG...GCAACTTCTGCCTTTTTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp CAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTGCCCATTGTGAACGGTTACTACACCTCTGGCAGGAATaGGAGGCACAAGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: QMRVKDPQPGAAHCERLLHLWQE*EAQVAV
Trigger: TACTGCAACTTGTGCCTCTCATTCCTGCCAGAGGTG...TAGTAACCGTTCACAATGGGCAGCTCCCGGCTGAGGGTCTTTGACCCTCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AAGACAGTGTACGTGAGAAGGAAGTCATCCAGGAGGGTCTCCCTTCTTCCCCACCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KTVYVRRKSSRRVSLLPHPTRNV*VFLFAL
Trigger: CAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGG...GTGGGGAAGAAGGGAGACCCTCCTGGATGACTTCCTTCTCACGTACACTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGGCTGGAGGAAGAGGTaGACAAGCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAGWRKR*TSIIFS
Trigger: GGAGAAAATGATGCTTGTTCACCTCTTCCTCCAGCC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAGTTTGCTGGAATGCTaGCGAATCCAAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLSLLEC*RIQRPT
Trigger: TGTGGGTCTTTGGATTCGTCAGCATTCCAGCAAACT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGGCAGTGTGAGCACTaGCCTTATCCACATGCTTCT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARQCEH*PYPHAS
Trigger: AGAAGCATGTGGATAAGGTCAGTGCTCACACTGCCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGAGGCAGAGAGCGAGTaGGATGGAGCAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFEAESE*DGAREG
Trigger: CCCTTCCCTTGCTCCATCTCACTCGCTCTCTGCCTC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASFLSK*GSKTLS
Trigger: GCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCAGAAGGCTGAGATTTaGAGTGTGTTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAQKAEI*SVFPTS
Trigger: GGAAGTGGGGAACACACTGCAAATCTCAGCCTTCTG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGCTTGCCCAGCTGGCTaGAGAGCAGAATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASACPAG*RAESPW
Trigger: CCACGGAGATTCTGCTCTGCAGCCAGCTGGGCAAGC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACCAGCTGCACTCGCTTaGCCAGCTGGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKPAALA*PAGCRA
Trigger: TGCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCCAGCTGCACTCGCTTaGCCAGCTGGCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKPAALA*PAGCRA
Trigger: TGCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATCCCGTAGCTCAAAGTaGTGCAGATACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASRSSK*CRYRGG
Trigger: ACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCTATTGTTAGTAACTaGGTGAGGAGGGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLAIVSN*VRRALE
Trigger: CTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAACTTCTGAGAGCTGCTaGCTGGCAAACCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHATSESC*LANLWR
Trigger: TCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCCCTGCACCACCTGGTaGCGAAGGTGCCAGATTACG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASPCTTW*RRCQIT
Trigger: CGTAATCTGGCACCTTCGGCACCAGGTGGTGCAGGG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATTGCCTACGGGGTCCTaGATTCTGCTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHALPTGS*ILLSCA
Trigger: AGCACAAGACAGCAGAATGCAGGACCCCGTAGGCAA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGGAAACGGGAGCGCGTaGCTCTGTGGCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSGNGSA*LCGCRE
Trigger: TTCCCTGCAGCCACAGAGGCACGCGCTCCCGTTTCC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR GCA 90 bp ACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCATACTTCCCAGGGAGCTaGTTGGGATCTACATGTGTC +
Preference number: 4 (lower is better)
Translates to: TLPLRVLTRASAAISLEAYFPGS*LGSTCV
Trigger: GACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTA...TGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCGCACTCCCAGCTGTaGGGGCTGGGCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPHSQL*GLGHST
Trigger: AGTGCTGTGGCCCAGCCCCCACAGCTGGGAGTGCGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCCGCACTCCCAGCTGTaGGGGCTGGGCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSPHSQL*GLGHST
Trigger: AGTGCTGTGGCCCAGCCCCCACAGCTGGGAGTGCGG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTCCCTAGACACAAGTaGCTTTTGGTGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLPRHK*LLVMSQ
Trigger: CTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGTCATTCCATAGTGTaGGCAAGGAGCCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLCHSIV*ARSLYE
Trigger: CTCATACAGGCTCCTTGCCCACACTATGGAATGACA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATCTCAAGCTCAGTGTaGTTCCTGAGCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAISSSV*FLSPGN
Trigger: GTTTCCTGGGCTCAGGAACCACACTGAGCTTGAGAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTGGGCATATCTGACTTaGGGTCTGAGCAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAWAYLT*GLSSMQ
Trigger: TTGCATGCTGCTCAGACCCCAAGTCAGATATGCCCA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCTTCATCTGGCTTGGTaGGCATATCTGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALHLAW*AYLTWG
Trigger: ACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTGCCCCTGCACCACCTaGTGCCGAAGGTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASCPCTT*CRRCQI
Trigger: AATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGCAGGGCTAGTTTGCTaGAATGCTGACGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLAGLVC*NADESK
Trigger: TTTGGATTCGTCAGCATTCCAGCAAACTAGCCCTGC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAAAGAAATCCTGTGTTaGACCACTGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAKEILC*TTAEDP
Trigger: CGGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLSHPR*KTASGC
Trigger: GCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR CCA 90 bp GTGTACGTGAGAAGGAAGTCATCCAGGAGGGTCTCCCTTCTTCCCCACTTAGGTAAGTCCTGGTCCGCTTaGCTTTGTGAGCACATGGCA +
Preference number: 4 (lower is better)
Translates to: VYVRRKSSRRVSLLPHLGKSWSA*LCEHMA
Trigger: TGCCATGTGCTCACAAAGCCAAGCGGACCAGGACTT...ACCTAAGTGGGGAAGAAGGGAGACCCTCCTGGATGACTTCCTTCTCACGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CCA 90 bp AAGACAGTGTACGTGAGAAGGAAGTCATCCAGGAGGGTCTCCCTTCTTCCCCACCAAGCCATGAAGTCCTaGTCCGCTTGGCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KTVYVRRKSSRRVSLLPHQAMKS*SAWLCE
Trigger: CTCACAAAGCCAAGCGGACCAGGACTTCATGGCTTG...GTGGGGAAGAAGGGAGACCCTCCTGGATGACTTCCTTCTCACGTACACTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR TCA 90 bp CCACTGAGTCATCCTCGGTGGAAGACTGCGAGCGGCTGCTCCATTCATCGTCCTTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: PLSHPRWKTASGCSIHRPSCSLT*TVVTSS
Trigger: TGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGA...AGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACAGGATGGCCTTATATaGTTACACTGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLQDGLI*LHWPNL
Trigger: AAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGCTTTGGAAACTTCTaGGAGCTGCTGCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASFGNF*ELLPGK
Trigger: TTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPATHRTV*ELCCNK
Trigger: TTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGTTTGCTGGAATGCTaGCGAATCCAAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASLLEC*RIQRPT
Trigger: TGTGGGTCTTTGGATTCGTCAGCATTCCAGCAAACT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GAAGACAGTGTACGTGAGAAGGAAGTCATCCAGGAGGGTCTCCCTTCTTCCCCATCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EDSVREKEVIQEGLPSSPSFLSK*GSKTLS
Trigger: GCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGA...TGGGGAAGAAGGGAGACCCTCCTGGATGACTTCCTTCTCACGTACACTGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR TCA 90 bp CGCGGCGGAATCTTTCCTCTCCAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTAAGTACTCTCCCTTCTaGGATAAAGGAAGTTACAGG +
Preference number: 4 (lower is better)
Translates to: RGGIFPLQMRVKDPQPGAKYSPF*DKGSYR
Trigger: CCTGTAACTTCCTTTATCTCAGAAGGGAGAGTACTT...AGCTCCCGGCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGATTCCGCCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATGTCCAGTAGGAGTTaGCAGACTCCTATGGCCATA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAMSSRS*QTPMAI
Trigger: TATGGCCATAGGAGTCTGGCAACTCCTACTGGACAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGCTGGGCCACAGCACTaGACTTTCTTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASAGPQH*TFFSTR
Trigger: CCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCAGC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGCTTGCCCAGCTGGCTaGAGAGCAGAATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKACPAG*RAESPW
Trigger: CCACGGAGATTCTGCTCTGCAGCCAGCTGGGCAAGC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCTATTGTTAGTAACTaGGTGAGGAGGGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAAIVSN*VRRALE
Trigger: CTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCCCTGCACCACCTGGTaGCGAAGGTGCCAGATTACG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSPCTTW*RRCQIT
Trigger: CGTAATCTGGCACCTTCGGCACCAGGTGGTGCAGGG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACGGGGTCCTGCATTCTaGTGTCTTGTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHARGPAF*CLVLTS
Trigger: AGAAGTTAGCACAAGACAGCAGAATGCAGGACCCCG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACCTGTGTTGGACCACTaGGGAAGACCCGATCGTCCC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKPVLDH*GRPDRP
Trigger: GGGACGATCGGGTCTTCCGCAGTGGTCCAACACAGG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPACLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAACAGTTCCTCTATGCTaGAGCCAGTTCTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLTVPLC*SQFSLR
Trigger: TCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGACAGGTCACCAAACTaGTTAGTCCTGCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHADRSPN*LVLQCL
Trigger: GAGACACTGCAGGACTAACCAGTTTGGTGACCTGTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTCTTGATGCTCTTTTaGAGACAGGTCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLLMLF*RQVTKL
Trigger: CAGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATCTCAAGCTCAGTGTaGTTCCTGAGCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAISSSV*FLSPGN
Trigger: GTTTCCTGGGCTCAGGAACCACACTGAGCTTGAGAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSGSGVL*ATFHDG
Trigger: GCCGTCATGGAATGTGGCCCACAGGACACCAGAGCC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGCCCCTGCACCACCTaGTGCCGAAGGTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYCPCTT*CRRCQI
Trigger: AATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCAGGGCTAGTTTGCTaGAATGCTGACGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAAGLVC*NADESK
Trigger: TTTGGATTCGTCAGCATTCCAGCAAACTAGCCCTGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCTGCGGTGTCTGTGCTaGCTAGAACAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASLRCLC*LEQTRR
Trigger: CCTGCGAGTCTGTTCTAGCCAGCACAGACACCGCAG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGTCAGCTAGAACGCTaGAGAGGCGGAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASQLER*RGGEKR
Trigger: TCTTTTCTCTCCGCCTCTCCAGCGTTCTAGCTGACT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR CCA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCACTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPLSHPR*KTASGC
Trigger: GCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAG...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp ACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCAAACCTAAGGAAACTGTaGGTCTCACAGGTGCTATGG +
Preference number: 4 (lower is better)
Translates to: TLPLRVLTRASAAISLEANLRKL*VSQVLW
Trigger: CCATAGCACCTGTGAGACCCACAGTTTCCTTAGGTT...TGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCAGTCTACCAGCTCTaGCCCAACGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPVYQL*PNAAPP
Trigger: AGGAGGAGCTGCGTTGGGTCAGAGCTGGTAGACTGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCGAGGGATTTGGAGATaGCTAAGTCATTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARGIWR*LSHLAE
Trigger: TTCAGCCAAATGACTTAGTCATCTCCAAATCCCTCG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSPLSGG*HHFLNT
Trigger: CGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCAGGATGGCCTTATATaGTTACACTGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAQDGLI*LHWPNL
Trigger: AAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGTTTGCTGGAATGCTaGCGAATCCAAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASLLEC*RIQRPT
Trigger: TGTGGGTCTTTGGATTCGTCAGCATTCCAGCAAACT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTTAATAGCAAGGTTGTaGTTTTGCCTACGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALIARL*FCLRGP
Trigger: AGGACCCCGTAGGCAAAATCACAACCTTGCTATTAA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGATGCAAGACTTTACGTTTCCTACGCGGAACGTCTGAGTTTTCCTCTTTGCCTAGGAGAGTCAAGCCATaGAGTCCTGGTCCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RCKTLRFLRGTSEFSSLPRRVKP*SPGPLG
Trigger: GCCAAGCGGACCAGGACTTCATGGCTTGACTCTCCT...AGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGGAAACGTAAAGTCTTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAATATATTCGACCAGATaGCTCGAGGGATTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLIYSTR*LEGFGD
Trigger: ATCTCCAAATCCCTCGAGGCATCTGGTCGAATATAT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATTTTCTCCCAGGTCTaGGACAGTCGACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAIFSQV*DSRLTE
Trigger: TTCTGTCAGTCGACTGTCGCAGACCTGGGAGAAAAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGGTTCGGACAGTGTCTaGGATCATATGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAGSDSV*DHMQLF
Trigger: GAAAAGCTGCATATGATCGCAGACACTGTCCGAACC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAATATCCAGAGAGGGTaGATGGCCCATCCTATTAAC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPANIQRG*MAHPIN
Trigger: GTTAATAGGATGGGCCATGCACCCTCTCTGGATATT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TGTACAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTTCCTACGCGTCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: CTEQSTGKQDARLYVSYASSVED*ERLLHS
Trigger: TGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGA...CGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKSSVED*ERLLHS
Trigger: TGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGCCATAGATCTGCACTaGACGAAAGGACAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAAIDLH*TKGQCS
Trigger: AGAACACTGTCCTTTCGTCCAGTGCAGATCTATGGC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCCCAGCTGTGGGGGCTaGGCCACAGCACTGCACTTT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSPSCGG*ATALHF
Trigger: AAAGTGCAGTGCTGTGGCCCAGCCCCCACAGCTGGG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTACCCAGCTGTGGGGGCTaGGCCACAGCACTGCACTTT +
Preference number: 4 (lower is better)
Translates to: CILVKGSSCKMQATVRGLPSCGG*ATALHF
Trigger: AAAGTGCAGTGCTGTGGCCCAGCCCCCACAGCTGGG...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCTCATTTTCTGCAAATaGGTTCAAAGTGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALIFCK*VQSVRQ
Trigger: CTGGCGGACACTTTGAACCCATTTGCAGAAAATGAG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCTCTTGATGCTCTTTTaGAGACAGGTCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPALLMLF*RQVTKL
Trigger: CAGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATCAAACAGAGCCTGCTaGCTGTCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASNRAC*LSMTYR
Trigger: CCTGTATGTCATTGACAGCCAGCAGGCTCTGTTTGA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACTCCCTAGACACAAGTaGCTTTTGGTGATGTCACAG +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHALPRHK*LLVMSQ
Trigger: CTGTGACATCACCAAAAGCCACTTGTGTCTAGGGAG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHALTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACGGTTCTCACGGCTCTaGTGTCCTGTGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRFSRL*CPVGHI
Trigger: AATGTGGCCCACAGGACACCAGAGCCGTGAGAACCG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTGCCTGGCAAACCTCTaGAGACAGTTGTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPACLANL*RQLLNF
Trigger: GAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCTGAGAGCTGCTGCCTaGCAAACCTCTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASLRAAA*QTSGDS
Trigger: ACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGATTCTGCAAAGCTTTaGAAACTTCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLDSAKL*KLLRAA
Trigger: AGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATGCCCCTGCACCACCTaGTGCCGAAGGTGCCAGATT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGICPCTT*CRRCQI
Trigger: AATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCGCAGGGCTGGGATATaGGTAGCAGTGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSRRAGI*VAVKAQ
Trigger: CTGGGCTTTCACTGCTACCCATATCCCAGCCCTGCG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ACGAGTCGCACAAAGCATATGCTATTTCTCCCCACCCCGGTTTCAGCTAACAGTTCCCTGTCCTTTCACTaGGAACTGAGTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TSRTKHMLFLPTPVSANSSLSFH*ELSPSG
Trigger: GCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGA...ACTGTTAGCTGAAACCGGGGTGGGGAGAAATAGCATATGCTTTGTGCGACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp GTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTGGGCTATTGAATGTTaGTCTCTTGCCAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: VPDTTTYLSESRESTESSWAIEC*SLANCL
Trigger: AAGGCAGTTGGCAAGAGACCAACATTCAATAGCCCA...GGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAATCAGGTCAGCTGCTTaGACGATAATAATATTCCTC +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLIRSAA*TIIIFL
Trigger: GAGGAATATTATTATCGTTCAAGCAGCTGACCTGAT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp CAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTGCCCATTGTGAACGGTTACTATCCTGTAAAACCCCTTaGGGTTCACTCTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QMRVKDPQPGAAHCERLLSCKTP*GSLCPL
Trigger: TAAAGGACAGAGTGAACCTCAAGGGGTTTTACAGGA...TAGTAACCGTTCACAATGGGCAGCTCCCGGCTGAGGGTCTTTGACCCTCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASCSLT*TVVTSS
Trigger: TGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASPTRNV*VFLFAL
Trigger: CAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACTTTTGCCTTCACACTaGCATAGGAGTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHALLPSH*HRSALL
Trigger: TAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGGCTCGATCCTGTGTaGGAGCTCAAACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYRLDPV*ELKQSL
Trigger: CAGGCTCTGTTTGAGCTCTCACACAGGATCGAGCCT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHADVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCATGTGTCAATAGTTaGTTGTGGTGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAACVNS*LWCKVM
Trigger: CATCACTTTGCACCACAATCAACTATTGACACATGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATAAATGTTCAGGACTaGAGTTTTACATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAINVQD*SFTCWA
Trigger: GGCCCAGCATGTAAAACTTCAGTCCTGAACATTTAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCATGCAGCATTTCTCTaGATGGACCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSHAAFL*MDQPWR
Trigger: CCTCCAGGGCTGGTCCATTCAGAGAAATGCTGCATG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCATGCAGCATTTCTCTaGATGGACCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKHAAFL*MDQPWR
Trigger: CCTCCAGGGCTGGTCCATTCAGAGAAATGCTGCATG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGTGGGCCACATTCCATaGCGGCAGCATGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYVGHIP*RQHAAF
Trigger: AAATGCTGCATGCTGCCGTCATGGAATGTGGCCCAC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATTAATAGCAAGGTTGTaGTTTTGCCTACGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHALIARL*FCLRGP
Trigger: AGGACCCCGTAGGCAAAATCACAACCTTGCTATTAA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GAAGACAGTGTACGTGAGAAGGAAGTCATCCAGGAGGGTCTCCCTTCTTCCCCACCTCGTCGATGTATTTaGAATAAGGCACATCGAAGG +
Preference number: 4 (lower is better)
Translates to: EDSVREKEVIQEGLPSSPPRRCI*NKAHRR
Trigger: CCTTCGATGTGCCTTATTTCAAATACATCGACGAGG...TGGGGAAGAAGGGAGACCCTCCTGGATGACTTCCTTCTCACGTACACTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGCTGCTAGCTCTCTCTaGACCGCAGATGTTAGACGC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKAASSL*TADVRR
Trigger: GCGTCTAACATCTGCGGTGCAGAGAGAGCTAGCAGC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCTGGGCCACAGCACTaGACTTTCTTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIAGPQH*TFFSTR
Trigger: CCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCAGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGCCGTGAGGGAAGTCTaGTCTCCGGTTCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSAVREV*SPVLTA
Trigger: AGCCGTGAGAACCGGAGAGCAGACTTCCCTCACGGC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGATCTGCGGTGTCTGTaGTGGCTAGAACAGACTCGC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKDLRCL*WLEQTR
Trigger: GCGAGTCTGTTCTAGCCAGCACAGACACCGCAGATC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASKTASG*SIHRPH
Trigger: ATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp ACAAGAAGTCTGATCGATAAGGCTTTAGTGCATTACAGTTTCTGCTCTGAAAAGCTCTCGCACGGCGGCTaGATCTTGACGGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: TRSLIDKALVHYSFCSEKLSHGG*ILTEPT
Trigger: CGTGGGCTCCGTCAAGATGCAGCCGCCGTGCGAGAG...CTTTTCAGAGCAGAAACTGTAATGCACTAAAGCCTTATCGATCAGACTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp ACTGCCTACATGCCAGGTGAACGCCTGCTAACCCTCCTCCTCCTTGTATTTCTTGCCATAGATCTGCACTaGACGAAAGGACAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TAYMPGERLLTLLLLVFLAIDLH*TKGQCS
Trigger: AGAACACTGTCCTTTCGTCCAGTGCAGATCTATGGC...AAGAAATACAAGGAGGAGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTACCACATATCTCCAATaGCTCTCCGCACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFTTYLQ*LSALPA
Trigger: AGCTGGGAGTGCGGAGAGCCATTGGAGATATGTGGT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTCTTGGGCTATACTaGAAACTTTTGCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASLGLY*KLLPSH
Trigger: GTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGTGGCCACCCAAAGCTaGACCTCATTGCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKVATQS*TSLHLW
Trigger: CCAGAGATGCAATGAGGTCCAGCTTTGGGTGGCCAC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGAGCAGAATCTCCGTaGCCACCCAAAGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRAESP*PPKAGP
Trigger: AGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCTCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACTCGCTTGCCCAGCTaGCTGCAGAGCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITRLPS*LQSRIS
Trigger: GGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSTSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKTSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCTGCCCATCAGAGCATaGATGCTAGCTGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLPIRA*MLAAVL
Trigger: GAGGACTGCAGCTAGCATCCATGCTCTGATGGGCAG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPADVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACGGTTCTCACGGCTCTaGTGTCCTGTGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRFSRL*CPVGHI
Trigger: AATGTGGCCCACAGGACACCAGAGCCGTGAGAACCG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCTGAGAGCTGCTGCCTaGCAAACCTCTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLRAAA*QTSGDS
Trigger: ACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACGCAGGGCTGGGATATaGGTAGCAGTGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRRAGI*VAVKAQ
Trigger: CTGGGCTTTCACTGCTACCCATATCCCAGCCCTGCG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTCCCTGTCCTTTCACTaGGAACTGAGTCCATCTGGC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASSLSFH*ELSPSG
Trigger: GCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR CCA 90 bp ACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTGGAAGACCCTGTTTCTTTGTCCTaGACTTCTTCCAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TTYLSESRESTESSSVEDPVSLS*TSSRCK
Trigger: CTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGG...GTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CAA 72 bp CCTCTCTGGTGGCTGACATCACTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAATGTCTTGGGTTATACT +
Preference number: 4 (lower is better)
Translates to: PLWWLTSLPEHA*AGFPVNVLGYT
Trigger: AGTATAACCCAAGACATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCAGTCTACCAGCTCTaGCCCAACGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPVYQL*PNAAPP
Trigger: AGGAGGAGCTGCGTTGGGTCAGAGCTGGTAGACTGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGTTGCAGTAAAAGCTTaGCACCATTTTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAVAVKA*HHFAIL
Trigger: AAGAATGGCAAAATGGTGTCAAGCTTTTACTGCAAC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCACCTCTGGCAGGAATaGGAGGCACAAGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYHLWQE*EAQVAV
Trigger: TACTGCAACTTGTGCCTCTCATTCCTGCCAGAGGTG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCCTACGCGGAACGTCTaGGTTTTCCTCTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSPTRNV*VFLFAL
Trigger: CAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGCATGTGTCAATAGTTaGTTGTGGTGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAACVNS*LWCKVM
Trigger: CATCACTTTGCACCACAATCAACTATTGACACATGC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKNRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYNRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAACAGGCAGGAAGAGTaGGAAGTGCACCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKNRQEE*EVHQDS
Trigger: GGAGTCTTGGTGCACTTCTCACTCTTCCTGCCTGTT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGGCATAGGAAAAAGGTaGGAACACGTGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASGIGKR*EHVLVL
Trigger: CAGCACAAGCACGTGTTCTCACCTTTTTCCTATGCC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGGCTGGAGGAAGAGGTaGACAAGCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASGWRKR*TSIIFS
Trigger: GGAGAAAATGATGCTTGTTCACCTCTTCCTCCAGCC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GCAAGACTTTACGTTTCCTACGCGGAACGTCTGAGTTTTCCTCTTTGCCTTGATGGGAGCTGCCCATTGTaGACGGTTACTAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARLYVSYAERLSFPLCLDGSCPL*TVTNKG
Trigger: GCCTTTGTTAGTAACCGTTCACAATGGGCAGCTCCC...ATCAAGGCAAAGAGGAAAACTCAGACGTTCCGCGTAGGAAACGTAAAGTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGGGAGCTGCCCATTGTaGACGGTTACTAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSGSCPL*TVTNKG
Trigger: GCCTTTGTTAGTAACCGTTCACAATGGGCAGCTCCC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR TCA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGACGGCGGCTGCATCTTaGCGGAGCCCACGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LFIGITAPAWNKLQILVKTAAAS*RSPRPS
Trigger: GGATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGT...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp ACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTCGGTGGAAGACTGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTYLSESRESTESSSVEDWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...GTCTTCCACCGAGGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATCCTCATCGACCTTTaGTGTGATTCCTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAILIDL*CDSSFS
Trigger: AGAAAATGAGGAATCACAGCAAAGGTCGATGAGGAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCAGAAGGCTGAGATTTaGAGTGTGTTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFQKAEI*SVFPTS
Trigger: GGAAGTGGGGAACACACTGCAAATCTCAGCCTTCTG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAAAGCTGGACCTCATTaGATCTCTGGAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASKAGPH*ISGAEG
Trigger: GCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTTCATCTTTTTGAATaGATCTCTGTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLHLFE*ISVGFV
Trigger: CACAAAGCCTACAGAGATGCATTCAAAAAGATGAAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTGTCTGCGATCATATaGAGCTTTTCAAAATTGACA +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVSAII*SFSKLT
Trigger: TGTCAATTTTGAAAAGCTGCATATGATCGCAGACAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCTCCCTGCACTGGCTaGTGTCATTCCATAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPPCTG*CHSIVW
Trigger: CCACACTATGGAATGACAGCAGCCAGTGCAGGGAGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAAAGCAAATCTTGACTaGACAAAATCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAKANLD*TKSSLP
Trigger: GGGAAGGGAGGATTTTGTGCAGTCAAGATTTGCTTT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCCTGCACCACCTGGTaGCGAAGGTGCCAGATTACG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPCTTW*RRCQIT
Trigger: CGTAATCTGGCACCTTCGGCACCAGGTGGTGCAGGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTTGCCTACGGGGTCCTaGATTCTGCTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLPTGS*ILLSCA
Trigger: AGCACAAGACAGCAGAATGCAGGACCCCGTAGGCAA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTAAATTCGGTGTATaGTCCACACTACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASKFGV*STLPVC
Trigger: ACAAACAGGTAGTGTGGAGCATACACCGAATTTAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAAAGGCAAGATTTCTTaGTTCAGGTCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLKGKIS*FRSLIS
Trigger: TGAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCAAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPKTASG*SIHRPH
Trigger: ATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTT...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTCCTCGGTGGAAGACTaGGAGCGGCTGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSSSVED*ERLLHS
Trigger: TGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp GCCTTACCTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGGTCGCACAAAGCATATaGTATTTCTCCCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: ALPVSLSWTSSRCKSFKRVAQSI*YFSPPR
Trigger: CCGGGGTGGGGAGAAATAGCATATGCTTTGTGCGAC...CCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp ACTGCCTACATGCCAGGTGAACGCCTGCTAACCCTCCTCCTCCTTGTATTTCTTTCTTTTGCCAGCTTCTaGACTAGTTCAATTCGTCCG +
Preference number: 4 (lower is better)
Translates to: TAYMPGERLLTLLLLVFLSFASF*TSSIRP
Trigger: CGGACGAATTGAACTAGTCCAGAAGCTGGCAAAAGA...AAGAAATACAAGGAGGAGGAGGGTTAGCAGGCGTTCACCTGGCATGTAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACCTCTCCCCCTCTCTaGTGGCTGACATCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITSPPL*WLTSLP
Trigger: AGGAAGTGATGTCAGCCACCAGAGAGGGGGAGAGGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGTCCCGAGAGTAGCATaGAGAAACCTCTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIVPRVA*RNLSPS
Trigger: AGAGGGGGAGAGGTTTCTCCATGCTACTCTCGGGAC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGGCTCTGGTGTCCTGTaGGCCACATTCCATGACGGC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEGSGVL*ATFHDG
Trigger: GCCGTCATGGAATGTGGCCCACAGGACACCAGAGCC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGATTCTGCAAAGCTTTaGAAACTTCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHADSAKL*KLLRAA
Trigger: AGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCGCAGGGCTGGGATATaGGTAGCAGTGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSRRAGI*VAVKAQ
Trigger: CTGGGCTTTCACTGCTACCCATATCCCAGCCCTGCG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCGCAGGGCTGGGATATaGGTAGCAGTGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRRRAGI*VAVKAQ
Trigger: CTGGGCTTTCACTGCTACCCATATCCCAGCCCTGCG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACAGACTCGCAGGGCTaGGATATGGGTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTDSQG*DMGSSE
Trigger: TTCACTGCTACCCATATCCCAGCCCTGCGAGTCTGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCTGCGGTGTCTGTGCTaGCTAGAACAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSLRCLC*LEQTRR
Trigger: CCTGCGAGTCTGTTCTAGCCAGCACAGACACCGCAG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTGAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAACTGAGTCATCCTCGGTaGAAGACTGCGAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LNVHLQVTSLCTEQSTGKLSHPR*KTASGC
Trigger: GCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAG...TTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CCA 90 bp CCACTGAGTCATCCTCGGTGGAAGACTGCGAGCGGCTGCTCCATTCATCGTCCTCCTTTAGGTGAGATTTaGGAAAAATTGCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PLSHPRWKTASGCSIHRPPLGEI*EKLPKK
Trigger: TTTCTTTGGCAATTTTTCCCAAATCTCACCTAAAGG...AGGACGATGAATGGAGCAGCCGCTCGCAGTCTTCCACCGAGGATGACTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATCAGCTCTTGCTCGTaGATTGAATTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAISSCS*IELNRL
Trigger: GAGTCTATTCAATTCAATTCACGAGCAAGAGCTGAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGGCTCGATCCTGTGTaGGAGCTCAAACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRRLDPV*ELKQSL
Trigger: CAGGCTCTGTTTGAGCTCTCACACAGGATCGAGCCT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCCCTCTCTGGTGGCTaGCATCACTTCCTGAACACG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPLSGG*HHFLNT
Trigger: CGTGTTCAGGAAGTGATGTCAGCCACCAGAGAGGGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKGKEPV*GTQNAS
Trigger: TGATGCATTTTGCGTACCTCATACAGGCTCCTTGCC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACCTGCATTTGGAAAATaGATGGACCAGGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKPAFGK*MDQALA
Trigger: TGCAAGGGCCTGGTCCATTCATTTTCCAAATGCAGG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGTGGGCCACATTCCATaGCGGCAGCATGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRVGHIP*RQHAAF
Trigger: AAATGCTGCATGCTGCCGTCATGGAATGTGGCCCAC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTTGTTAGTAACTGCGTaGGGAGGGCTTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLLVTA*GGLWRV
Trigger: AACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTTGTTAGTAACTGCGTaGGGAGGGCTTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLLVTA*GGLWRV
Trigger: AACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGGCATAGGAAAAAGGTaGGAACACGTGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYGIGKR*EHVLVL
Trigger: CAGCACAAGCACGTGTTCTCACCTTTTTCCTATGCC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGGCTGGAGGAAGAGGTaGACAAGCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYGWRKR*TSIIFS
Trigger: GGAGAAAATGATGCTTGTTCACCTCTTCCTCCAGCC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAGCTTTGGAAACTTCTaGGAGCTGCTGCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKSFGNF*ELLPGK
Trigger: TTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAERAFC*VISGSH
Trigger: GTGAGAACCAGATATTACTCAACAGAAAGCTCTTTC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTTTTTGCCCAGTTTCTaGAAAGCCTGGATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASFLPSF*KAWIGC
Trigger: GCAGCCAATCCAGGCTTTTCAGAAACTGGGCAAAAA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAACCTCGTCGATGTATTTaGAATAAGGCACATCGAAGG +
Preference number: 4 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEPRRCI*NKAHRR
Trigger: CCTTCGATGTGCCTTATTTCAAATACATCGACGAGG...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCAATCAGTCTGGAAGCATaGGCTACTCAGAGCCTTACC +
Preference number: 4 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPISLEA*ATQSLT
Trigger: GGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGAT...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp GAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAACAGTCCGCTTGGCTTTGTaGGCACATGGCAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: ECSSSGNQSLYRAIHWETVRLAL*AHGRSD
Trigger: GTCACTTCTGCCATGTGCTCACAAAGCCAAGCGGAC...TGTTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCAAGAATTTCATCACTaGTTTCTTCGGAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAQEFHH*FLRSLQ
Trigger: TTGAAGACTCCGAAGAAAGCAGTGATGAAATTCTTG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASVTVPL*WSQFSL
Trigger: TAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGAC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTATACTGGAAACTTTTaGCTTCACACTGACATAGGA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAYTGNF*LHTDIG
Trigger: TCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCAGAAGGCTGAGATTTaGAGTGTGTTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSQKAEI*SVFPTS
Trigger: GGAAGTGGGGAACACACTGCAAATCTCAGCCTTCTG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAAAGCTGGACCTCATTaGATCTCTGGAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKKAGPH*ISGAEG
Trigger: GCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGGTTCGGACAGTGTCTaGGATCATATGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFGSDSV*DHMQLF
Trigger: GAAAAGCTGCATATGATCGCAGACACTGTCCGAACC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACGGGGTCCTGCATTCTaGTGTCTTGTGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRGPAF*CLVLTS
Trigger: AGAAGTTAGCACAAGACAGCAGAATGCAGGACCCCG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAAAGGCAAGATTTCTTaGTTCAGGTCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAKGKIS*FRSLIS
Trigger: TGAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCCCTGCCTGAGAATCTaGAACACTTTCGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKPCLRI*NTFGFC
Trigger: ACAGAAGCCGAAAGTGTTCCAGATTCTCAGGCAGGG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCCCAGCTGTGGGGGCTaGGCCACAGCACTGCACTTT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPPSCGG*ATALHF
Trigger: AAAGTGCAGTGCTGTGGCCCAGCCCCCACAGCTGGG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACCACATATCTCCAATaGCTCTCCGCACTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITTYLQ*LSALPA
Trigger: AGCTGGGAGTGCGGAGAGCCATTGGAGATATGTGGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp CAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTTCCTACGCGGAACTGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: QSNPLGNKMQDFTFPTRNCLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...GTTCCGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGAGCAGAATCTCCGTaGCCACCCAAAGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRRAESP*PPKAGP
Trigger: AGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCTCT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAACTCGCTTGCCCAGCTaGCTGCAGAGCAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDETRLPS*LQSRIS
Trigger: GGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAGT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGGAAAGCAACGTGCTTaGCATAGACATTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSGKQRA*HRHSRS
Trigger: GCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGAAACCTCTCCTCCCTaGAGATCTAGAGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYETSPP*RSRDAV
Trigger: GACAGCATCTCTAGATCTCCAGGGAGGAGAGGTTTC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTATCTCAAGCTCAGTGTaGTTCCTGAGCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSISSSV*FLSPGN
Trigger: GTTTCCTGGGCTCAGGAACCACACTGAGCTTGAGAT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATATCTCAAGCTCAGTGTaGTTCCTGAGCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYISSSV*FLSPGN
Trigger: GTTTCCTGGGCTCAGGAACCACACTGAGCTTGAGAT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATGGGCATATCTGACTTaGGGTCTGAGCAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKWAYLT*GLSSMQ
Trigger: TTGCATGCTGCTCAGACCCCAAGTCAGATATGCCCA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCTTCATCTGGCTTGGTaGGCATATCTGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLHLAW*AYLTWG
Trigger: ACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTTCATCTGGCTTGGTaGGCATATCTGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLHLAW*AYLTWG
Trigger: ACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAAAGAAATCCTGTGTTaGACCACTGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYKEILC*TTAEDP
Trigger: CGGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATACCAGTTCTTTAAATaGTGGAAAACTACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLYQFFK*WKTTKC
Trigger: ACACTTGGTAGTTTTCCACCATTTAAAGAACTGGTA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CATCAGCTGCTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTCAGCTGCTATCAGTCTaGAAGCATGAGCTACTCAGA +
Preference number: 4 (lower is better)
Translates to: HQLLSVWKHELLRALPVSQLLSV*KHELLR
Trigger: TCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTG...AGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTCCTGTAAAACCCCTTaGGGTTCACTCTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASSCKTP*GSLCPL
Trigger: TAAAGGACAGAGTGAACCTCAAGGGGTTTTACAGGA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCGAGGGATTTGGAGATaGCTAAGTCATTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRGIWR*LSHLAE
Trigger: TTCAGCCAAATGACTTAGTCATCTCCAAATCCCTCG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGCTGACATCACTTCCTaGACACGCTTTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRADITS*TRFGWL
Trigger: AAGCCAGCCAAAGCGTGTTCAGGAAGTGATGTCAGC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGAATGCAGACTTTTGTaGCTCTGTCACCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYECRLL*LCHLSK
Trigger: CTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACATGCAGCATTTCTCTaGATGGACCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEHAAFL*MDQPWR
Trigger: CCTCCAGGGCTGGTCCATTCAGAGAAATGCTGCATG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKTHRTV*ELCCNK
Trigger: TTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAGGCAGTGTGAGCACTaGCCTTATCCACATGCTTCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIRQCEH*PYPHAS
Trigger: AGAAGCATGTGGATAAGGTCAGTGCTCACACTGCCT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTTTTTGCCCAGTTTCTaGAAAGCCTGGATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKFLPSF*KAWIGC
Trigger: GCAGCCAATCCAGGCTTTTCAGAAACTGGGCAAAAA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCCTTTCACTGGGAACTaGGTCCATCTGGCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSPFTGN*VHLAAK
Trigger: CTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGGGAGCTGCCCATTGTaGACGGTTACTAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRGSCPL*TVTNKG
Trigger: GCCTTTGTTAGTAACCGTTCACAATGGGCAGCTCCC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCCTCAATGCTCTTCCTaGACAAGAAGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFPQCSS*TRRILS
Trigger: GGAGAGAATTCTTCTTGTGCAGGAAGAGCATTGAGG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGATGTCCAGTAGGAGTTaGCAGACTCCTATGGCCATA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKMSSRS*QTPMAI
Trigger: TATGGCCATAGGAGTCTGGCAACTCCTACTGGACAT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTTCATCTTGTTCAATTaGAGACTTCCTTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAFILFN*RLPCFQ
Trigger: TTGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKVTVPL*WSQFSL
Trigger: TAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGAC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATATACTGGAAACTTTTaGCTTCACACTGACATAGGA +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAYTGNF*LHTDIG
Trigger: TCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATATTTTCTCCCAGGTCTaGGACAGTCGACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYIFSQV*DSRLTE
Trigger: TTCTGTCAGTCGACTGTCGCAGACCTGGGAGAAAAT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAATTTTCTCCCAGGTCTaGGACAGTCGACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKIFSQV*DSRLTE
Trigger: TTCTGTCAGTCGACTGTCGCAGACCTGGGAGAAAAT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGGTTCGGACAGTGTCTaGGATCATATGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYGSDSV*DHMQLF
Trigger: GAAAAGCTGCATATGATCGCAGACACTGTCCGAACC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGGTTCGGACAGTGTCTaGGATCATATGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKGSDSV*DHMQLF
Trigger: GAAAAGCTGCATATGATCGCAGACACTGTCCGAACC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSRSSKC*RYRGGE
Trigger: CTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTCCCGTAGCTCAAAGTaGTGCAGATACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSSRSSK*CRYRGG
Trigger: ACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAEIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGAGAACACGTGCTTGTaGTGTAAGCCCATGCTATTG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSENTCL*CKPMLL
Trigger: CAATAGCATGGGCTTACAGCACAAGCACGTGTTCTC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTACTTCTGAGAGCTGCTaGCTGGCAAACCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSTSESC*LANLWR
Trigger: TCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAPDLRF*KALETS
Trigger: AGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAATATCCAGAGAGGGTaGATGGCCCATCCTATTAAC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFNIQRG*MAHPIN
Trigger: GTTAATAGGATGGGCCATGCACCCTCTCTGGATATT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGATTACGTAAGATTTaGAGAGTGAGCGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARLRKI*RVSEDF
Trigger: AAAATCTTCGCTCACTCTGCAAATCTTACGTAATCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCCCTGCACCACCTGGTaGCGAAGGTGCCAGATTACG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPPCTTW*RRCQIT
Trigger: CGTAATCTGGCACCTTCGGCACCAGGTGGTGCAGGG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGCCATAGATCTGCACTaGACGAAAGGACAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKAIDLH*TKGQCS
Trigger: AGAACACTGTCCTTTCGTCCAGTGCAGATCTATGGC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTCTTTTGCCAGCTTCTaGACTAGTTCAATTCGTCCG +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASSFASF*TSSIRP
Trigger: CGGACGAATTGAACTAGTCCAGAAGCTGGCAAAAGA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKCLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATCCTTAAGACTGAATTaGTGGAAAAGGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHASLRLN*WKRALF
Trigger: GAATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTACAGTTCCTCTATGCTaGAGCCAGTTCTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFTVPLC*SQFSLR
Trigger: TCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCATGAAAGGGATTTTTaGTGGCTTCATCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAHERDF*WLHLFE
Trigger: TTCAAAAAGATGAAGCCACCAAAAATCCCTTTCATG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGACAGGTCACCAAACTaGTTAGTCCTGCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIDRSPN*LVLQCL
Trigger: GAGACACTGCAGGACTAACCAGTTTGGTGACCTGTC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTCAAACAGAGCCTGCTaGCTGTCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYSNRAC*LSMTYR
Trigger: CCTGTATGTCATTGACAGCCAGCAGGCTCTGTTTGA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTCAAACAGAGCCTGCTaGCTGTCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKSNRAC*LSMTYR
Trigger: CCTGTATGTCATTGACAGCCAGCAGGCTCTGTTTGA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTGTCATTCCATAGTGTaGGCAAGGAGCCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSCHSIV*ARSLYE
Trigger: CTCATACAGGCTCCTTGCCCACACTATGGAATGACA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTGTCATTCCATAGTGTaGGCAAGGAGCCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKCHSIV*ARSLYE
Trigger: CTCATACAGGCTCCTTGCCCACACTATGGAATGACA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGCAGGGCTAGTTTGCTaGAATGCTGACGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSAGLVC*NADESK
Trigger: TTTGGATTCGTCAGCATTCCAGCAAACTAGCCCTGC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTACAGACTCGCAGGGCTaGGATATGGGTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSTDSQG*DMGSSE
Trigger: TTCACTGCTACCCATATCCCAGCCCTGCGAGTCTGT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGACAGACTCGCAGGGCTaGGATATGGGTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRTDSQG*DMGSSE
Trigger: TTCACTGCTACCCATATCCCAGCCCTGCGAGTCTGT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ACCTTGCCCCTGAGGGTACTGACAAGGGCATCAGCTGCTATCAGTCTGGAAGCAATAACTGCTCCAGCATaGAACAAATTACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: TLPLRVLTRASAAISLEAITAPA*NKLQIL
Trigger: CAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTAT...TGCTTCCAGACTGATAGCAGCTGATGCCCTTGTCAGTACCCTCAGGGGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp CAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTTCCTACGCGGAACACTGTTTCTTTGTCCTaGACTTCTTCCAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: QSNPLGNKMQDFTFPTRNTVSLS*TSSRCK
Trigger: CTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGT...GTTCCGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAACTCGCTTGCCCAGCTaGCTGCAGAGCAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDETRLPS*LQSRIS
Trigger: AGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAGT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620335.4
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTCCTGTAAAACCCCTTaGGGTTCACTCTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYSCKTP*GSLCPL
Trigger: TAAAGGACAGAGTGAACCTCAAGGGGTTTTACAGGA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACACCTCTGGCAGGAATaGGAGGCACAAGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEHLWQE*EAQVAV
Trigger: TACTGCAACTTGTGCCTCTCATTCCTGCCAGAGGTG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCTTTTGCCTTCACACTaGCATAGGAGTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLLPSH*HRSALL
Trigger: TAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFTSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACAGGATGGCCTTATATaGTTACACTGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKQDGLI*LHWPNL
Trigger: AAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGCTTTGGAAACTTCTaGGAGCTGCTGCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSFGNF*ELLPGK
Trigger: TTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAGCTTTGGAAACTTCTaGGAGCTGCTGCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSSFGNF*ELLPGK
Trigger: TTTGCCAGGCAGCAGCTCTCAGAAGTTTCCAAAGCT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITHRTV*ELCCNK
Trigger: TTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAGTTTGCTGGAATGCTaGCGAATCCAAAGACCCACA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISLLEC*RIQRPT
Trigger: TGTGGGTCTTTGGATTCGTCAGCATTCCAGCAAACT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTTAATAGCAAGGTTGTaGTTTTGCCTACGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLIARL*FCLRGP
Trigger: AGGACCCCGTAGGCAAAATCACAACCTTGCTATTAA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCACCTCAATGCTCTTCCTaGACAAGAAGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPPQCSS*TRRILS
Trigger: GGAGAGAATTCTTCTTGTGCAGGAAGAGCATTGAGG...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTATGAGAGGCACAAGTTaGAGTAAAAGCTTGACACCA +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFMRGTS*SKSLTP
Trigger: TGGTGTCAAGCTTTTACTGCAACTTGTGCCTCTCAT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCATGAGAGGCACAAGTTaGAGTAAAAGCTTGACACCA +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASMRGTS*SKSLTP
Trigger: TGGTGTCAAGCTTTTACTGCAACTTGTGCCTCTCAT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTAGCCAGATCCTCTTCTaGATACTGGATCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSSQILF*ILDLFC
Trigger: GCAGAAAAGATCCAGTATGCAGAAGAGGATCTGGCT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTTGACATTGTTCATCTaGCCATCAGAGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLTLFI*PSEHGC
Trigger: GCATCCATGCTCTGATGGGCAGATGAACAATGTCAA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCTATTGTTAGTAACTaGGTGAGGAGGGCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIAIVSN*VRRALE
Trigger: CTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAACTTCTGAGAGCTGCTaGCTGGCAAACCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDETSESC*LANLWR
Trigger: TCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAGAAGT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAATATCCAGAGAGGGTaGATGGCCCATCCTATTAAC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKNIQRG*MAHPIN
Trigger: GTTAATAGGATGGGCCATGCACCCTCTCTGGATATT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAATATCCAGAGAGGGTaGATGGCCCATCCTATTAAC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKNIQRG*MAHPIN
Trigger: GTTAATAGGATGGGCCATGCACCCTCTCTGGATATT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGATTACGTAAGATTTaGAGAGTGAGCGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHARLRKI*RVSEDF
Trigger: AAAATCTTCGCTCACTCTGCAAATCTTACGTAATCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGCAAGTATATATTCATaGAGCATCCTCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSASIYS*SILSLW
Trigger: CCACAGGGAGAGGATGCTGCATGAATATATACTTGC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTGAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAAAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LNVHLQVTSLCTEQSTGKKTASG*SIHRPH
Trigger: ATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTT...TTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTAGACAAGGGCATCAGCTaGTATCAGTCTGGAAGCATG +
Preference number: 4 (lower is better)
Translates to: CILVKGSSCKMQATVRGLDKGIS*YQSGSM
Trigger: CATGCTTCCAGACTGATAGCAGCTGATGCCCTTGTC...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAATTTCATCTCTTTCCTaGAGCTTGCACATCACCCCT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKISSLS*SLHITP
Trigger: AGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAAT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp CATCAGCTGCTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTGTCACTTCATCATCTTaGTGTTCAGACTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HQLLSVWKHELLRALPVSVTSSS*CSDFSC
Trigger: ACAGGAGAAGTCTGAACACCAAGATGATGAAGTGAC...AGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGTCACTTCATCATCTTaGTGTTCAGACTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASVTSSS*CSDFSC
Trigger: ACAGGAGAAGTCTGAACACCAAGATGATGAAGTGAC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTCCTCTTCTGCATACTaGATCTTTTCTGCCACGACT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKSSSAY*IFSATT
Trigger: AGTCGTGGCAGAAAAGATCCAGTATGCAGAAGAGGA...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTCATTTTCTGCAAATaGGTTCAAAGTGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLIFCK*VQSVRQ
Trigger: CTGGCGGACACTTTGAACCCATTTGCAGAAAATGAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTACCTCATTGCATCTCTaGAGCAGAAGGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSTSLHL*SRRLRF
Trigger: AAATCTCAGCCTTCTGCTCCAGAGATGCAATGAGGT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACCTCATTGCATCTCTaGAGCAGAAGGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTSLHL*SRRLRF
Trigger: AAATCTCAGCCTTCTGCTCCAGAGATGCAATGAGGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATCTCCCCCTCTCTGGTaGCTGACATCACTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDESPPLW*LTSLPE
Trigger: TTCAGGAAGTGATGTCAGCCACCAGAGAGGGGGAGA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACAGCATTTCTCTGAATaGACCAGCCCTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEQHFSE*TSPGGC
Trigger: GCATCCTCCAGGGCTGGTCCATTCAGAGAAATGCTG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCGGTTCTCACGGCTCTaGTGTCCTGTGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPRFSRL*CPVGHI
Trigger: AATGTGGCCCACAGGACACCAGAGCCGTGAGAACCG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTGCCTGGCAAACCTCTaGAGACAGTTGTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYCLANL*RQLLNF
Trigger: GAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTGCCTGGCAAACCTCTaGAGACAGTTGTTAAACTTC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSCLANL*RQLLNF
Trigger: GAAGTTTAACAACTGTCTCCAGAGGTTTGCCAGGCA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCAGGGCTAGTTTGCTaGAATGCTGACGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIAGLVC*NADESK
Trigger: TTTGGATTCGTCAGCATTCCAGCAAACTAGCCCTGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTGCGGTGTCTGTGCTaGCTAGAACAGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLRCLC*LEQTRR
Trigger: CCTGCGAGTCTGTTCTAGCCAGCACAGACACCGCAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCATACCAGTTCTTTAAATaGTGGAAAACTACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VASSGLVGISDLGSEQHAYQFFK*WKTTKC
Trigger: ACACTTGGTAGTTTTCCACCATTTAAAGAACTGGTA...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp GCATTTAAATACCACATTTGTGTAGCTTCATCTGGCTaGGTGGGCATATCTGACTTGGGGTCTGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AFKYHICVASSG*VGISDLGSEQH
Trigger: ATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTACACAAATGTGGTATTTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp TGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTTaGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: WKHELLRALPVS*SWTSSRCKSFK
Trigger: TTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
3UTR CAA 72 bp CCAGGGAGCTGCTTGGGATCTACATGTGTCCATTTATaGGATTTAAACAAATCAGCACAAGGCAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: PGSCLGSTCVHL*DLNKSAQGKGR
Trigger: TCGTCCCTTGCCTTGTGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACTAAGTCATTTGGCTaGAGTTCATGCTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTKSFG*SSCFSP
Trigger: TGGGGAAAAGCATGAACTTCAGCCAAATGACTTAGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAGGCTCGATCCTGTGTaGGAGCTCAAACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPRLDPV*ELKQSL
Trigger: CAGGCTCTGTTTGAGCTCTCACACAGGATCGAGCCT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGGCAAGGAGCCTGTATaGGGTACGCAAAATGCATCA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEGKEPV*GTQNAS
Trigger: TGATGCATTTTGCGTACCTCATACAGGCTCCTTGCC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGICILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCTGCATTTGGAAAATaGATGGACCAGGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPAFGK*MDQALA
Trigger: TGCAAGGGCCTGGTCCATTCATTTTCCAAATGCAGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCATGCAGCATTTCTCTaGATGGACCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPHAAFL*MDQPWR
Trigger: CCTCCAGGGCTGGTCCATTCAGAGAAATGCTGCATG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGGCATAGGAAAAAGGTaGGAACACGTGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEGIGKR*EHVLVL
Trigger: CAGCACAAGCACGTGTTCTCACCTTTTTCCTATGCC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGGCTGGAGGAAGAGGTaGACAAGCATCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEGWRKR*TSIIFS
Trigger: GGAGAAAATGATGCTTGTTCACCTCTTCCTCCAGCC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTACCCACAGGACTGTCTaGGAGTTGTGCTGTAACAAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSTHRTV*ELCCNK
Trigger: TTTGTTACAGCACAACTCTCAGACAGTCCTGTGGGT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAGGCAGTGTGAGCACTaGCCTTATCCACATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDERQCEH*PYPHAS
Trigger: AGAAGCATGTGGATAAGGTCAGTGCTCACACTGCCT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTTTTTGCCCAGTTTCTaGAAAGCCTGGATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSFLPSF*KAWIGC
Trigger: GCAGCCAATCCAGGCTTTTCAGAAACTGGGCAAAAA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAAAGGAAGTTACAGGTAAGTCACCTTTCACTGGGAACTaGGTCCATCTGGCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: LREASTLPSEIKEVTGKSPFTGN*VHLAAK
Trigger: CTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGG...TGACTTACCTGTAACTTCCTTTATCTCAGAAGGGAGAGTACTTGCTTCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCTCAATGCTCTTCCTaGACAAGAAGAATTCTCTCC +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPQCSS*TRRILS
Trigger: GGAGAGAATTCTTCTTGTGCAGGAAGAGCATTGAGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSVTVPL*WSQFSL
Trigger: TAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGAC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTATTTTCTCCCAGGTCTaGGACAGTCGACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSIFSQV*DSRLTE
Trigger: TTCTGTCAGTCGACTGTCGCAGACCTGGGAGAAAAT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGAGAACACGTGCTTGTaGTGTAAGCCCATGCTATTG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSENTCL*CKPMLL
Trigger: CAATAGCATGGGCTTACAGCACAAGCACGTGTTCTC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAAAGGTGAGAACACGTaGTTGTGCTGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSKGENT*LCCKPM
Trigger: CATGGGCTTACAGCACAAGCACGTGTTCTCACCTTT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCAAGTATATATTCATaGAGCATCCTCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIASIYS*SILSLW
Trigger: CCACAGGGAGAGGATGCTGCATGAATATATACTTGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATGATCAAGTTGCAAAATaGAGGCTACAGTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNDQVAK*RLQSEA
Trigger: GGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATC...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp CATCAGCTGCTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTGGTAGGAGCAAACAGTaGATTTTAGTTAAGGGATCA +
Preference number: 4 (lower is better)
Translates to: HQLLSVWKHELLRALPVSGRSKQ*ILVKGS
Trigger: TGATCCCTTAACTAAAATGCACTGTTTGCTCCTACC...AGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AGCAAACAGTGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCTGTGGGTCTCACAGGTaGTATGGTAGGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: SKQCILVKGSSCKMQATVCGSHR*YGRSKQ
Trigger: CTGTTTGCTCCTACCATAGCACCTGTGAGACCCACA...GACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AGCAAACAGTGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCCCCTGCCTGAGAATCTaGAACACTTTCGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SKQCILVKGSSCKMQATVPCLRI*NTFGFC
Trigger: ACAGAAGCCGAAAGTGTTCCAGATTCTCAGGCAGGG...GACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTCTCTTGGGCTATACTaGAAACTTTTGCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSSLGLY*KLLPSH
Trigger: GTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATCTCTTGGGCTATACTaGAAACTTTTGCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKSLGLY*KLLPSH
Trigger: GTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAACCTCATTGCATCTCTaGAGCAGAAGGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGITSLHL*SRRLRF
Trigger: AAATCTCAGCCTTCTGCTCCAGAGATGCAATGAGGT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGACAGGTCACCAAACTaGTTAGTCCTGCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEDRSPN*LVLQCL
Trigger: GAGACACTGCAGGACTAACCAGTTTGGTGACCTGTC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACTCTTGATGCTCTTTTaGAGACAGGTCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILLMLF*RQVTKL
Trigger: CAGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCAAACAGAGCCTGCTaGCTGTCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSNRAC*LSMTYR
Trigger: CCTGTATGTCATTGACAGCCAGCAGGCTCTGTTTGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTTCATCTGGCTTGGTaGGCATATCTGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELHLAW*AYLTWG
Trigger: ACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTGAGAGCTGCTGCCTaGCAAACCTCTGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLRAAA*QTSGDS
Trigger: ACTGTCTCCAGAGGTTTGCCAGGCAGCAGCTCTCAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTATAAGAAGTCATCACTaGTACTCTCTCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFIRSHH*YSLFHA
Trigger: GGCATGAAAGAGAGAGTACCAGTGATGACTTCTTAT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCATAAGAAGTCATCACTaGTACTCTCTCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASIRSHH*YSLFHA
Trigger: GGCATGAAAGAGAGAGTACCAGTGATGACTTCTTAT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAAAGAAATCCTGTGTTaGACCACTGCGGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEKEILC*TTAEDP
Trigger: CGGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCGAGGGATTTGGAGATaGCTAAGTCATTTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSRGIWR*LSHLAE
Trigger: TTCAGCCAAATGACTTAGTCATCTCCAAATCCCTCG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAATCAGCTCTTGCTCGTaGATTGAATTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKISSCS*IELNRL
Trigger: GAGTCTATTCAATTCAATTCACGAGCAAGAGCTGAT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGCATGTGTCAATAGTTaGTTGTGGTGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIACVNS*LWCKVM
Trigger: CATCACTTTGCACCACAATCAACTATTGACACATGC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYSNEDE*GVDETK
Trigger: TTTTGTCTCATCAACGCCTCATTCATCCTCATTACT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCAGGATGGCCTTATATaGTTACACTGGCCAAACCTT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRQDGLI*LHWPNL
Trigger: AAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCAGCATGCAATATGCTaGAATAGTTCTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKQHAIC*NSSPWK
Trigger: TTTCCATGGAGAACTATTTCAGCATATTGCATGCTG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCAGCATGCAATATGCTaGAATAGTTCTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSQHAIC*NSSPWK
Trigger: TTTCCATGGAGAACTATTTCAGCATATTGCATGCTG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKERAFC*VISGSH
Trigger: GTGAGAACCAGATATTACTCAACAGAAAGCTCTTTC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGAAAGAGCTTTCTGTTaGGTAATATCTGGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSERAFC*VISGSH
Trigger: GTGAGAACCAGATATTACTCAACAGAAAGCTCTTTC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GGAACAAATTACAAATTCTGGTTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAGGGAGCTGCCCATTGTaGACGGTTACTAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: GTNYKFWLREASTLPSEIGSCPL*TVTNKG
Trigger: GCCTTTGTTAGTAACCGTTCACAATGGGCAGCTCCC...TATCTCAGAAGGGAGAGTACTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCCTCGTCGATGTATTTaGAATAAGGCACATCGAAGG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRPRRCI*NKAHRR
Trigger: CCTTCGATGTGCCTTATTTCAAATACATCGACGAGG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAATTGCAGACTTCCTTaGTTTCAAAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASNCRLP*FQSNNS
Trigger: GCTGTTATTGCTTTGAAAGCAAGGAAGTCTGCAATT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAATTCATCTTGTTCAATTaGAGACTTCCTTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEFILFN*RLPCFQ
Trigger: TTGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAA...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAAGTCATTCAAAAGGTaGTCCAAAATCTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIKSFKR*SKIFSG
Trigger: CCCGGAGAAGATTTTGGAGCACCTTTTGAATGACTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEVTVPL*WSQFSL
Trigger: TAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGAC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTATACTGGAAACTTTTaGCTTCACACTGACATAGGA +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFYTGNF*LHTDIG
Trigger: TCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTATACTGGAAACTTTTaGCTTCACACTGACATAGGA +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASYTGNF*LHTDIG
Trigger: TCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGCCAGATCCTCTTCTaGATACTGGATCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSQILF*ILDLFC
Trigger: GCAGAAAAGATCCAGTATGCAGAAGAGGATCTGGCT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAGCCAGATCCTCTTCTaGATACTGGATCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSSQILF*ILDLFC
Trigger: GCAGAAAAGATCCAGTATGCAGAAGAGGATCTGGCT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTCCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCCCAGGAAACAGCACTaGTATAAAGATGTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKPRKQH*YKDVKK
Trigger: CTTTTTGACATCTTTATAGCAGTGCTGTTTCCTGGG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTTGCCTACGGGGTCCTaGATTCTGCTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLPTGS*ILLSCA
Trigger: AGCACAAGACAGCAGAATGCAGGACCCCGTAGGCAA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAAGACTGCGAGCGGCTaGTCCATTCATCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPKTASG*SIHRPH
Trigger: ATGAGGACGATGAATGGAGCAGCCGCTCGCAGTCTT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCTTTTGCCAGCTTCTaGACTAGTTCAATTCGTCCG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSFASF*TSSIRP
Trigger: CGGACGAATTGAACTAGTCCAGAAGCTGGCAAAAGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATGCCTTAACAGAGCCTaGCACAAGTCATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDECLNRA*HKSSVV
Trigger: GACAACTGATGACTTGTGCCAGGCTCTGTTAAGGCA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTCCTTAAGACTGAATTaGTGGAAAAGGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFSLRLN*WKRALF
Trigger: GAATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCCTCTTCTGCATACTaGATCTTTTCTGCCACGACT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSSSAY*IFSATT
Trigger: AGTCGTGGCAGAAAAGATCCAGTATGCAGAAGAGGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGATTCTGCAAAGCTTTaGAAACTTCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIDSAKL*KLLRAA
Trigger: AGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp CCTGAACACGCTTTGGCTGGCTTTCCTGTGAATGTCTaGGGTTATACTGATAAAACTCAGCAACTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PEHALAGFPVNV*GYTDKTQQLLF
Trigger: GAAAAGAAGTTGCTGAGTTTTATCAGTATAACCCAAGACATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGTTGCAGTAAAAGCTTaGCACCATTTTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIVAVKA*HHFAIL
Trigger: AAGAATGGCAAAATGGTGTCAAGCTTTTACTGCAAC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSCSLT*TVVTSS
Trigger: TGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTTTTGCCTTCACACTaGCATAGGAGTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELLPSH*HRSALL
Trigger: TAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTACTAAGTCATTTGGCTaGAGTTCATGCTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSTKSFG*SSCFSP
Trigger: TGGGGAAAAGCATGAACTTCAGCCAAATGACTTAGT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAATCAGCTCTTGCTCGTaGATTGAATTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIISSCS*IELNRL
Trigger: GAGTCTATTCAATTCAATTCACGAGCAAGAGCTGAT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGACGTTGTCTTGTCTTaGTGCTGGCACATCTCATAT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEDVVLS*CWHISY
Trigger: ATATGAGATGTGCCAGCATCAAGACAAGACAACGTC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCTCTAACCAGTCCTTaGAAATATCAAGAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPLTSP*KYQEVL
Trigger: TAAGACCTCTTGATATTTTCAAGGACTGGTTAGAGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISNEDE*GVDETK
Trigger: TTTTGTCTCATCAACGCCTCATTCATCCTCATTACT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTATAAATGTTCAGGACTaGAGTTTTACATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSINVQD*SFTCWA
Trigger: GGCCCAGCATGTAAAACTTCAGTCCTGAACATTTAT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATAAATGTTCAGGACTaGAGTTTTACATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRINVQD*SFTCWA
Trigger: GGCCCAGCATGTAAAACTTCAGTCCTGAACATTTAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTTGTTAGTAACTGCGTaGGGAGGGCTTTGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLLVTA*GGLWRV
Trigger: AACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGGCATAGGAAAAAGGTaGGAACACGTGCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPGIGKR*EHVLVL
Trigger: CAGCACAAGCACGTGTTCTCACCTTTTTCCTATGCC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCTTTCCTCTCCAAATaGGGGTCAAAGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSFLSK*GSKTLS
Trigger: GCTGAGGGTCTTTGACCCTCATTTGGAGAGGAAAGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp TTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAAAGGAAGTTACAGGTAAGTCAATGTCCAGTAGGAGTTaGCAGACTCCTATGGCCATA +
Preference number: 4 (lower is better)
Translates to: LREASTLPSEIKEVTGKSMSSRS*QTPMAI
Trigger: TATGGCCATAGGAGTCTGGCAACTCCTACTGGACAT...TGACTTACCTGTAACTTCCTTTATCTCAGAAGGGAGAGTACTTGCTTCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCAAGAATTTCATCACTaGTTTCTTCGGAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYQEFHH*FLRSLQ
Trigger: TTGAAGACTCCGAAGAAAGCAGTGATGAAATTCTTG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCAAATTGCAGACTTCCTTaGTTTCAAAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPNCRLP*FQSNNS
Trigger: GCTGTTATTGCTTTGAAAGCAAGGAAGTCTGCAATT...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAAGTCATTCAAAAGGTaGTCCAAAATCTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRKSFKR*SKIFSG
Trigger: CCCGGAGAAGATTTTGGAGCACCTTTTGAATGACTT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGTCTTTGTACAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTTCCAAGTCATTCAAAAGGTaGTCCAAAATCTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLCTEQSTGKQDARLYVSKSFKR*SKIFSG
Trigger: CCCGGAGAAGATTTTGGAGCACCTTTTGAATGACTT...GGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTGTACAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp TTGAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAATGGACTTCTTCCAGGTaGAAGTCATTCAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNVHLQVTSLCTEQSTGKWTSSR*KSFKRC
Trigger: GCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCA...TTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATATATTCGACCAGATaGCTCGAGGGATTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRIYSTR*LEGFGD
Trigger: ATCTCCAAATCCCTCGAGGCATCTGGTCGAATATAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAAAGCTGGACCTCATTaGATCTCTGGAGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPKAGPH*ISGAEG
Trigger: GCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTTCATCTTTTTGAATaGATCTCTGTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLHLFE*ISVGFV
Trigger: CACAAAGCCTACAGAGATGCATTCAAAAAGATGAAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCTTCATCTTTTTGAATaGATCTCTGTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLHLFE*ISVGFV
Trigger: CACAAAGCCTACAGAGATGCATTCAAAAAGATGAAG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCTTCATCTTTTTGAATaGATCTCTGTAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLHLFE*ISVGFV
Trigger: CACAAAGCCTACAGAGATGCATTCAAAAAGATGAAG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGTGTCTGCGATCATATaGAGCTTTTCAAAATTGACA +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSVSAII*SFSKLT
Trigger: TGTCAATTTTGAAAAGCTGCATATGATCGCAGACAC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFEIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAAAGCAAATCTTGACTaGACAAAATCCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRKANLD*TKSSLP
Trigger: GGGAAGGGAGGATTTTGTGCAGTCAAGATTTGCTTT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGATTACGTAAGATTTaGAGAGTGAGCGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRLRKI*RVSEDF
Trigger: AAAATCTTCGCTCACTCTGCAAATCTTACGTAATCT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATCTAAATTCGGTGTATaGTCCACACTACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISKFGV*STLPVC
Trigger: ACAAACAGGTAGTGTGGAGCATACACCGAATTTAGA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTAAAGGCAAGATTTCTTaGTTCAGGTCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSKGKIS*FRSLIS
Trigger: TGAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GGAACAAATTACAAATTCTGGTTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAGTGAGTATCATAGTCTaGACCTCGGGGCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GTNYKFWLREASTLPSEIVSIIV*TSGLVL
Trigger: CAGAACAAGCCCCGAGGTGCAGACTATGATACTCAC...TATCTCAGAAGGGAGAGTACTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAACAGTTCCTCTATGCTaGAGCCAGTTCTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDETVPLC*SQFSLR
Trigger: TCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGAAACAATGTCAGGATaGCCTTATATGATTACACTG +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKETMSG*PYMITL
Trigger: CAGTGTAATCATATAAGGCCATCCTGACATTGTTTC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGAAACAATGTCAGGATaGCCTTATATGATTACACTG +
Preference number: 4 (lower is better)
Translates to: IIRHKNADFCDSVTSASSETMSG*PYMITL
Trigger: CAGTGTAATCATATAAGGCCATCCTGACATTGTTTC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTGGGCATATCTGACTTaGGGTCTGAGCAGCATGCAA +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPWAYLT*GLSSMQ
Trigger: TTGCATGCTGCTCAGACCCCAAGTCAGATATGCCCA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGATTCTGCAAAGCTTTaGAAACTTCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRDSAKL*KLLRAA
Trigger: AGCAGCTCTCAGAAGTTTCCAAAGCTTTGCAGAATC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACAGAGCAGAATCTCTTaGGCTATACTGGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIQSRIS*AILETF
Trigger: AAAAGTTTCCAGTATAGCCCAAGAGATTCTGCTCTG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620335.4
3UTR CAA 72 bp ATGTTCAGACAAAACTCCAGGGACACAAGGAAATTCTaGTTCCCACCTAAGCTGTCATTTCACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: MFRQNSRDTRKF*FPPKLSFHNPS
Trigger: AGAAGGATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTTTTGTCTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTAATCAGGTCAGCTGCTTaGACGATAATAATATTCCTC +
Preference number: 4 (lower is better)
Translates to: CILVKGSSCKMQATVRGLIRSAA*TIIIFL
Trigger: GAGGAATATTATTATCGTTCAAGCAGCTGACCTGAT...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAACAAGTGGCTTTTGGTaGTGTCACAGGTTGTATCAA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDETSGFW*CHRLYQ
Trigger: TTGATACAACCTGTGACATCACCAAAAGCCACTTGT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGTAATGAGGATGAATaGGGCGTTGATGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSNEDE*GVDETK
Trigger: TTTTGTCTCATCAACGCCTCATTCATCCTCATTACT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCAGCATGCAATATGCTaGAATAGTTCTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSQHAIC*NSSPWK
Trigger: TTTCCATGGAGAACTATTTCAGCATATTGCATGCTG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAATAATATTCCTCAATaGTCTTCCTGCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKNNIPQ*SSCTRR
Trigger: TCTTCTTGTGCAGGAAGAGCATTGAGGAATATTATT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp GGGAGCTGCTTGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCAATGAGAGGCACAAGTTaGAGTAAAAGCTTGACACCA +
Preference number: 4 (lower is better)
Translates to: GSCLGSTCVHLLDLNKSAMRGTS*SKSLTP
Trigger: TGGTGTCAAGCTTTTACTGCAACTTGTGCCTCTCAT...TGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAAGTCATTCAAAAGGTaGTCCAAAATCTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEKSFKR*SKIFSG
Trigger: CCCGGAGAAGATTTTGGAGCACCTTTTGAATGACTT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATCCTCATCGACCTTTaGTGTGATTCCTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRILIDL*CDSSFS
Trigger: AGAAAATGAGGAATCACAGCAAAGGTCGATGAGGAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGTGTCTGCGATCATATaGAGCTTTTCAAAATTGACA +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIVSAII*SFSKLT
Trigger: TGTCAATTTTGAAAAGCTGCATATGATCGCAGACAC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGAAATATTTGGTCATTaGATGTCAAGACGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYEIFGH*MSRRCL
Trigger: AAGACAACGTCTTGACATGCAATGACCAAATATTTC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGAGAACACGTGCTTGTaGTGTAAGCCCATGCTATTG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPENTCL*CKPMLL
Trigger: CAATAGCATGGGCTTACAGCACAAGCACGTGTTCTC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPDLRF*KALETS
Trigger: AGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTCTAAATTCGGTGTATaGTCCACACTACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSKFGV*STLPVC
Trigger: ACAAACAGGTAGTGTGGAGCATACACCGAATTTAGA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATCCTTAAGACTGAATTaGTGGAAAAGGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISLRLN*WKRALF
Trigger: GAATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCATGAAAGGGATTTTTaGTGGCTTCATCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKHERDF*WLHLFE
Trigger: TTCAAAAAGATGAAGCCACCAAAAATCCCTTTCATG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATCATGAAAGGGATTTTTaGTGGCTTCATCTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYHERDF*WLHLFE
Trigger: TTCAAAAAGATGAAGCCACCAAAAATCCCTTTCATG...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTGTCATTCCATAGTGTaGGCAAGGAGCCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPCHSIV*ARSLYE
Trigger: CTCATACAGGCTCCTTGCCCACACTATGGAATGACA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTTAACCTCCCTGCACTaGCTGCTGTCATTCCATAGT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLTSLH*LLSFHS
Trigger: ACTATGGAATGACAGCAGCCAGTGCAGGGAGGTTAA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCATTTGGAAAATGAATaGACCAGGCCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSHLENE*TRPLHF
Trigger: AAAATGCAAGGGCCTGGTCCATTCATTTTCCAAATG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGATGTCAAAAAGCATTaGACACGCCTCAGTAATGAG +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEDVKKH*TRLSNE
Trigger: CTCATTACTGAGGCGTGTCCAATGCTTTTTGACATC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGAAACAATGTCAGGATaGCCTTATATGATTACACTG +
Preference number: 4 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIETMSG*PYMITL
Trigger: CAGTGTAATCATATAAGGCCATCCTGACATTGTTTC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTACCAGTTCTTTAAATaGTGGAAAACTACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYYQFFK*WKTTKC
Trigger: ACACTTGGTAGTTTTCCACCATTTAAAGAACTGGTA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp GGGAGCTGCTTGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCAGTTGCAGTAAAAGCTTaGCACCATTTTGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: GSCLGSTCVHLLDLNKSAVAVKA*HHFAIL
Trigger: AAGAATGGCAAAATGGTGTCAAGCTTTTACTGCAAC...TGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTGCATTTTAGCAAGGTaGCAAGTATCTAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPCILAR*QVSSRQ
Trigger: CTGCCTGCTAGATACTTGTCACCTTGCTAAAATGCA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCCTCGTCGATGTATTTaGAATAAGGCACATCGAAGG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPPRRCI*NKAHRR
Trigger: CCTTCGATGTGCCTTATTTCAAATACATCGACGAGG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000620335.4
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAATTGCAGACTTCCTTaGTTTCAAAGCAATAACAGC +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSNCRLP*FQSNNS
Trigger: GCTGTTATTGCTTTGAAAGCAAGGAAGTCTGCAATT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGCAAGTATATATTCATaGAGCATCCTCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPASIYS*SILSLW
Trigger: CCACAGGGAGAGGATGCTGCATGAATATATACTTGC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp GGAACAAATTACAAATTCTGGTTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAATTTCATCTCTTTCCTaGAGCTTGCACATCACCCCT +
Preference number: 4 (lower is better)
Translates to: GTNYKFWLREASTLPSEIISSLS*SLHITP
Trigger: AGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAAT...TATCTCAGAAGGGAGAGTACTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTCTGTTATATACACGTaGCAGAAAATTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSSVIYT*QKISSV
Trigger: AACGGAGGAAATTTTCTGCCACGTGTATATAACAGA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTCATTTTCTGCAAATaGGTTCAAAGTGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLIFCK*VQSVRQ
Trigger: CTGGCGGACACTTTGAACCCATTTGCAGAAAATGAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CCA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGAAACAATGTCAGGATaGCCTTATATGATTACACTG +
Preference number: 4 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSETMSG*PYMITL
Trigger: CAGTGTAATCATATAAGGCCATCCTGACATTGTTTC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAATAAGAAGTCATCACTaGTACTCTCTCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEIRSHH*YSLFHA
Trigger: GGCATGAAAGAGAGAGTACCAGTGATGACTTCTTAT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp ATATTTGGTCATTGCATGTCAAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATATTGAAAACTGGACTG +
Preference number: 4 (lower is better)
Translates to: IFGHCMSRRCLV*MLAHLILKTGL
Trigger: CAGTCCAGTTTTCAATATGAGATGTGCCAGCATCAAGACAAGACAACGTCTTGACATGCAATGACCAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
3UTR CAA 72 bp TCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTaGGGATCTACATGTGTCCATTTATTGGATTTAAAC +
Preference number: 4 (lower is better)
Translates to: SFSLYSYFPGSC*GSTCVHLLDLN
Trigger: GTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTACTAAGTCATTTGGCTaGAGTTCATGCTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPTKSFG*SSCFSP
Trigger: TGGGGAAAAGCATGAACTTCAGCCAAATGACTTAGT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR TCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTGGCACATCTCATATTaGAAACTGGACTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPWHISY*KLDWIN
Trigger: GTTGATCCAGTCCAGTTTTCAATATGAGATGTGCCA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp GGGAGCTGCTTGGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCACAAGAATTTCATCACTaGTTTCTTCGGAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: GSCLGSTCVHLLDLNKSAQEFHH*FLRSLQ
Trigger: TTGAAGACTCCGAAGAAAGCAGTGATGAAATTCTTG...TGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCCAAGCAGCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEPDLRF*KALETS
Trigger: AGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGTCACTTCATCATCTTaGTGTTCAGACTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPVTSSS*CSDFSC
Trigger: ACAGGAGAAGTCTGAACACCAAGATGATGAAGTGAC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATCTGTTATATACACGTaGCAGAAAATTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDESVIYT*QKISSV
Trigger: AACGGAGGAAATTTTCTGCCACGTGTATATAACAGA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCTCTTGGGCTATACTaGAAACTTTTGCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSLGLY*KLLPSH
Trigger: GTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR TCA 90 bp TATTGTCCTTTAGAATGCAAAATAGACCCAGACATCACCTATGTTCAGACAAAATTGAACATGGGCTATTaGATGTTGGTCTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YCPLECKIDPDITYVQTKLNMGY*MLVSCQ
Trigger: TTGGCAAGAGACCAACATTCAATAGCCCATGTTCAA...TTTTGTCTGAACATAGGTGATGTCTGGGTCTATTTTGCATTCTAAAGGACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATTCATCTTGTTCAATTaGAGACTTCCTTGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEFILFN*RLPCFQ
Trigger: TTGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTATGAGGTACGCAAAATaGATCATCAGGCACAAGAAT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPMRYAK*IIRHKN
Trigger: ATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCTAAATTCGGTGTATaGTCCACACTACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSKFGV*STLPVC
Trigger: ACAAACAGGTAGTGTGGAGCATACACCGAATTTAGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp AGCAAACAGTGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCATTCATTGGAATAACTaGTCCAGCATGGAACAAATT +
Preference number: 4 (lower is better)
Translates to: SKQCILVKGSSCKMQATVIHWNN*SSMEQI
Trigger: AATTTGTTCCATGCTGGAGCAGTTATTCCAATGAAT...GACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CCA 90 bp AATATTCATCTACAGTGTGACGACGGTGCATTCCAAGTATCTTTTGAAATTCTTTGTGATCCCAGGGGTTaGTATAACTGTTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NIHLQCDDGAFQVSFEILCDPRG*YNCFFV
Trigger: GACAAAGAAACAGTTATACCAACCCCTGGGATCACA...AAGAATTTCAAAAGATACTTGGAATGCACCGTCGTCACACTGTAGATGAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR TCA 90 bp GGAACAAATTACAAATTCTGGTTAAGAGAAGCAAGTACTCTCCCTTCTGAGATATTACAGTTTCTGCTCTaGAAAGCTGTGAGTATCATA +
Preference number: 4 (lower is better)
Translates to: GTNYKFWLREASTLPSEILQFLL*KAVSII
Trigger: TATGATACTCACAGCTTTTCAGAGCAGAAACTGTAA...TATCTCAGAAGGGAGAGTACTTGCTTCTCTTAACCAGAATTTGTAATTTGTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp ACAAGAAGTCTGATCGATAAGGCTTTAGTGCATTACAGTTTCTGCTCTGAAAAGAATAATATTCCTCAATaGTCTTCCTGCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRSLIDKALVHYSFCSEKNNIPQ*SSCTRR
Trigger: TCTTCTTGTGCAGGAAGAGCATTGAGGAATATTATT...CTTTTCAGAGCAGAAACTGTAATGCACTAAAGCCTTATCGATCAGACTTCTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTCCTTCCTGTTTCATaGACGCTCTTAATGAAATAT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLLPVS*TLLMKY
Trigger: ATATTTCATTAAGAGCGTGCATGAAACAGGAAGGAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTACCTTGCCTATAGCTaGAAATCAGTTGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPYLAYS*KSVVQK
Trigger: TTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCCAGATCTAAGATTCTaGAAAGCTTTGGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPPDLRF*KALETS
Trigger: AGAAGTTTCCAAAGCTTTGCAGAATCTTAGATCTGG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCTGTTATATACACGTaGCAGAAAATTTCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSVIYT*QKISSV
Trigger: AACGGAGGAAATTTTCTGCCACGTGTATATAACAGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR GCA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGAAACTAATTTCACCTaGAAGCATGTGTCAATAGTT +
Preference number: 4 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPETNFT*KHVSIV
Trigger: AACTATTGACACATGCTTGCAGGTGAAATTAGTTTC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 90 bp CAGGTGCAGCCCGGCCCCCAGCGGCGCTCCGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCGCGGGCAGGTCCCTCAGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: QVQPGPQRRSASSAA*ARSAAARAGPSAAA
Trigger: GGCCGCGGCTGAGGGACCTGCCCGCGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGCGGAGCGCCGCTGGGGGCCGGGCTGCACCTG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 90 bp CCGCCGCGGCGGCCAGGGCCGGGCTCTCGCACGGCGGCTGCATCTTaGCGGAGCCCACGGCCATCCTCATGCCCTGACGGCGCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: PPRRPGPGSRTAAAS*RSPRPSSCPDGAAA
Trigger: CGCCGCAGCGCCGTCAGGGCATGAGGATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGTGCGAGAGCCCGGCCCTGGCCGCCGCGGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405243.1
ENST00000665637.1
CDS TCA 90 bp CACGGCGGCTGCATCTTGACGGAGCCCACGGCCATCCTCATGCCCTaGCGGCGCTGCGGCGCCGGGGGCTCCTCTCCACCGCGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: HGGCILTEPTAILMP*RRCGAGGSSPPRSP
Trigger: AGGCGAGCGCGGTGGAGAGGAGCCCCCGGCGCCGCAGCGCCGTCAGGGCATGAGGATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405243.1
ENST00000665637.1
CDS TCA 90 bp ACACGTCGCATGCGTCCTGCAAACAGGGATGCCGCTCGTGGGGCCTaGAGCTTGCGGTTGGGACAGGGCTGGCTGGCTGTTGGACGCTGG +
Preference number: 5 (lower is better)
Translates to: TRRMRPANRDAARGA*SLRLGQGWLAVGRW
Trigger: CCAGCGTCCAACAGCCAGCCAGCCCTGTCCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 90 bp GCATGCGTCCTGCAAACAGGGATGCCGCTCGTGGGGCCTGAAGCTTaGGGTTGGGACAGGGCTGGCTGGCTGTTGGACGCTGGACACCTG +
Preference number: 5 (lower is better)
Translates to: ACVLQTGMPLVGPEA*GWDRAGWLLDAGHL
Trigger: CAGGTGTCCAGCGTCCAACAGCCAGCCAGCCCTGTCCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 90 bp GTCCTGCAAACAGGGATGCCGCTCGTGGGGCCTGAAGCTTGCGGTTaGGACAGGGCTGGCTGGCTGTTGGACGCTGGACACCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VLQTGMPLVGPEACG*DRAGWLLDAGHLQL
Trigger: AAGCTGCAGGTGTCCAGCGTCCAACAGCCAGCCAGCCCTGTCCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 90 bp CTTGCGGTTGGGACAGGGCTGGCTGGCTGTTGGACGCTGGACACCTaGAGCTTCCCCTCCGAGAAGAGGCAAACAGCTCGTCTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LAVGTGLAGCWTLDT*SFPSEKRQTARLQP
Trigger: CGGCTGAAGACGAGCTGTTTGCCTCTTCTCGGAGGGGAAGCTGCAGGTGTCCAGCGTCCAACAGCCAGCCAGCCCTGTCCCAACCGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 90 bp CCAGCTGCACTCGCTTGCCCAGCTGGCTGCAGAGCAGAATCTCCGTaGCCACCCAAAGCTGGACCTCATTGCATCTCTGGAGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: PAALACPAGCRAESP*PPKAGPHCISGAEG
Trigger: GCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000468825.1
ENST00000665637.1
CDS CCA 90 bp AAGCTCACCCAAGAGCTTCCGACTCCTGGGTCTGCCCCTCGGCGGTaGAGACCACCAAAACCAGTCTCGATGCCCAGAGCTTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: KLTQELPTPGSAPRR*RPPKPVSMPRACNS
Trigger: GCTGTTGCAAGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCACCGCCGAGGGGCAGACCCAGGAGTCGGAAGCTCTTGGGTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 90 bp GGGGAGGTGAGGCAGTGGGGCTCACACCCGAGGCTCGATCCTGTGTaGGAGCTCAAACAGAGCCTGCTGGCTGTCAATGACATACAGGTG +
Preference number: 5 (lower is better)
Translates to: GEVRQWGSHPRLDPV*ELKQSLLAVNDIQV
Trigger: CACCTGTATGTCATTGACAGCCAGCAGGCTCTGTTTGAGCTCTCACACAGGATCGAGCCTCGGGTGTGAGCCCCACTGCCTCACCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS GCA 90 bp CTTGCAACAGCACCTCCAAAACAAGCACACACGTCGCATGCGTCCTaGAAACAGGGATGCCGCTCGTGGGGCCTGAAGCTTGCGGTTGGG +
Preference number: 5 (lower is better)
Translates to: LATAPPKQAHTSHAS*KQGCRSWGLKLAVG
Trigger: CCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 90 bp CCCAGAGCTTGCAACAGCACCTCCAAAACAAGCACACACGTCGCATaGGTCCTGCAAACAGGGATGCCGCTCGTGGGGCCTGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PRACNSTSKTSTHVA*VLQTGMPLVGPEAC
Trigger: GCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAGCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLRALEG*LSPAVR
Trigger: CCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS GCA 90 bp CCTCGGCGGTGGAGACCACCAAAACCAGTCTCGATGCCCAGAGCTTaGAACAGCACCTCCAAAACAAGCACACACGTCGCATGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: PRRWRPPKPVSMPRA*NSTSKTSTHVACVL
Trigger: CAGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCACCGCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 90 bp GAAAAGAGAGGGAGGGAGGGTAGAGGAGGCAGAGAGCGAGTGAGATaGAGCAAGGGAAGGGAAGGCAGGCAGGGAAAAGGAAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: EKRGREGRGGRERVR*SKGREGRQGKGNGS
Trigger: GCTCCCGTTTCCTTTTCCCTGCCTGCCTTCCCTTCCCTTGCTCCATCTCACTCGCTCTCTGCCTCCTCTACCCTCCCTCCCTCTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPARALEG*LSPAVR
Trigger: CCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS GCA 90 bp GGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAGGCAGTGGGGCTCACACCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: GKQRAWHRHSRSSKC*RYRGGEAVGLTPEA
Trigger: AGCCTCGGGTGTGAGCCCCACTGCCTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS GCA 90 bp ACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTaGTGCAGATACAGGGGAGGTGAGGCAGTGGGGCTCACACCCGAG +
Preference number: 5 (lower is better)
Translates to: TGKQRAWHRHSRSSK*CRYRGGEAVGLTPE
Trigger: CTCGGGTGTGAGCCCCACTGCCTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CATCAGCTGCTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTCACGGCGGCTGCATCTaGACGGAGCCCACGGCCATC +
Preference number: 5 (lower is better)
Translates to: HQLLSVWKHELLRALPVSHGGCI*TEPTAI
Trigger: GATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGTG...AGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCACGGCGGCTGCATCTaGACGGAGCCCACGGCCATC +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKHGGCI*TEPTAI
Trigger: GATGGCCGTGGGCTCCGTCAAGATGCAGCCGCCGTG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665637.1
CDS CCA 90 bp AAAGATCTTGCCATCCCTGTCCTTTCACTGGGAACTGAGTCCATCTaGCTGCTAAGAGCTCTGCAGTCAGCTAGAACGCTGGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: KDLAIPVLSLGTESI*LLRALQSARTLERR
Trigger: CCGCCTCTCCAGCGTTCTAGCTGACTGCAGAGCTCTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGATGGCAAGATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACCAGCTGCACTCGCTaGCCCAGCTGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTSCTR*PSWLQS
Trigger: GCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAACCAGCTGCACTCGCTaGCCCAGCTGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKTSCTR*PSWLQS
Trigger: GCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGGT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGTGGGCATATCTGACTaGGGGTCTGAGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHAVGISD*GSEQHA
Trigger: TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCAC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAAGCAAGGTTGTGATTTaGCCTACGGGGTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLSKVVI*PTGSCI
Trigger: AATGCAGGACCCCGTAGGCAAAATCACAACCTTGCT...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTATCTGAAAAGCCTGGATaGGCTGCGCCATTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLSEKPG*AAPFRN
Trigger: GTTCCTAAATGGCGCAGCCAATCCAGGCTTTTCAGA...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 90 bp GTGCTAGGAGAGTCAAGCCATGAAGTCCTGGTCCGCTTGGCTTTGTaGGCACATGGCAGAAGTGACACATGTGATCCCAGGGGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: VLGESSHEVLVRLAL*AHGRSDTCDPRGWY
Trigger: ATACCAACCCCTGGGATCACATGTGTCACTTCTGCCATGTGCTCACAAAGCCAAGCGGACCAGGACTTCATGGCTTGACTCTCCTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451559.1
ENST00000475788.1
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGT +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAQDALV*LFNLNS
Trigger: ACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTG...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRALEG*LSPAVR
Trigger: CCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCTGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASCVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS CCA 90 bp AAAGATCTTGCCATCCCTGTCCTTTCACTGGGAACTGAGTCCATCTaGCTGCTAAGAGCTCTGCAGTCAGCTAGAACGCTCCAATGGCTC +
Preference number: 5 (lower is better)
Translates to: KDLAIPVLSLGTESI*LLRALQSARTLQWL
Trigger: GAGCCATTGGAGCGTTCTAGCTGACTGCAGAGCTCTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGATGGCAAGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp AAAATCTTCTCCGGGGTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGT +
Preference number: 5 (lower is better)
Translates to: KIFSGVPDTTTYLSESREQDALV*LFNLNS
Trigger: ACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTG...CTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGACCCCGGAGAAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGATGCCTCGAGGGATTaGGAGATGACTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLDASRD*EMTKSF
Trigger: AAATGACTTAGTCATCTCCAAATCCCTCGAGGCATC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACTGACAGAAGCAGTGTaGAGACCCATCACAATGGCA +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHALTEAV*RPITMA
Trigger: TGCCATTGTGATGGGTCTCAACACTGCTTCTGTCAG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGCAAGGTTGTGATTTaGCCTACGGGGTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHASKVVI*PTGSCI
Trigger: AATGCAGGACCCCGTAGGCAAAATCACAACCTTGCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS GCA 90 bp CCAAAGCTGGACCTCATTGCATCTCTGGAGCAGAAGGCTGAGATTTaGAGTGTGTTCCCCACTTCCCTGTCTGCTGAACGTGAAGTAGAT +
Preference number: 5 (lower is better)
Translates to: PKLDLIASLEQKAEI*SVFPTSLSAEREVD
Trigger: ATCTACTTCACGTTCAGCAGACAGGGAAGTGGGGAACACACTGCAAATCTCAGCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000468825.1
ENST00000665637.1
CDS CCA 90 bp ATGTCCAGTAGGAGTTGCCAGACTCCTATGGCCATAGATCTGCACTaGACGAAAGGACAGTGTTCTAGAAGCCAGTCTACCAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: MSSRSCQTPMAIDLH*TKGQCSRSQSTSSD
Trigger: GTCAGAGCTGGTAGACTGGCTTCTAGAACACTGTCCTTTCGTCCAGTGCAGATCTATGGCCATAGGAGTCTGGCAACTCCTACTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCACGTCACTTCATCATCTaGGTGTTCAGACTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHARHFII*VFRLLL
Trigger: CAGGAGAAGTCTGAACACCAAGATGATGAAGTGACG...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHAMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTTCATCTTGTTCAATaGCAGACTTCCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLHLVQ*QTSLLS
Trigger: TGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTACTCCTTAAGACTGAATaGGTGGAAAAGGGCTTTATT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLLLKTE*VEKGFI
Trigger: AATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGAG...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGATGCCTCGAGGGATTaGGAGATGACTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHADASRD*EMTKSF
Trigger: AAATGACTTAGTCATCTCCAAATCCCTCGAGGCATC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCAAAGCTGGACCTCATaGCATCTCTGGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASQSWTS*HLWSRR
Trigger: CCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHARRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAGGGCTTTGGAGGGTTaGCTCAGCCCAGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDERALEG*LSPAVR
Trigger: CCTCACGGCTGGGCTGAGCAAACCCTCCAAAGCCCT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTTGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSCVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCATGGAAAAGCAAATCTaGACTGCACAAAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPAMEKQI*TAQNPP
Trigger: GGGAGGATTTTGTGCAGTCAAGATTTGCTTTTCCAT...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAGCCTTACCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEALPVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGGTAAGGC...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp ACAGCTGCCTTCATATCATTTTCTTTGTACAGCTACTTCCCAGGGAGCTGCTTGCTAACAGTGGGAACCTaGCCCCTGAGGGTACTGACA +
Preference number: 5 (lower is better)
Translates to: TAAFISFSLYSYFPGSCLLTVGT*PLRVLT
Trigger: TGTCAGTACCCTCAGGGGCAAGGTTCCCACTGTTAG...CAAGCAGCTCCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAAGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp GTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCATTGAACATGGGCTATaGAATGTTGGTCTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: VPDTTTYLSESRESTESSIEHGL*NVGLLP
Trigger: TGGCAAGAGACCAACATTCAATAGCCCATGTTCAAT...GGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS GCA 90 bp AGATGCTGGTCCACTGATAACATAATTCCCATGTCCAGTAGGAGTTaGCAGACTCCTATGGCCATAGATCTGCACTGGACGAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: RCWSTDNIIPMSSRS*QTPMAIDLHWTKGQ
Trigger: CTGTCCTTTCGTCCAGTGCAGATCTATGGCCATAGGAGTCTGGCAACTCCTACTGGACATGGGAATTATGTTATCAGTGGACCAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS CCA 90 bp CCAGAGAATGTGATGGCCACCAGAGCCAGATCCTCTTCTGCATACTaGATCTTTTCTGCCACGACTTTTAGGATCTCTTGGGCTATACTG +
Preference number: 5 (lower is better)
Translates to: PENVMATRARSSSAY*IFSATTFRISWAIL
Trigger: CAGTATAGCCCAAGAGATCCTAAAAGTCGTGGCAGAAAAGATCCAGTATGCAGAAGAGGATCTGGCTCTGGTGGCCATCACATTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS CCA 90 bp GCCAGCTTCTGGACTAGTTCAATTCGTCCGATTTCATCTCTTTCCTaGAGCTTGCACATCACCCCTGCCTTAAGAGTTGGAGAAAAAGCG +
Preference number: 5 (lower is better)
Translates to: ASFWTSSIRPISSLS*SLHITPALRVGEKA
Trigger: CGCTTTTTCTCCAACTCTTAAGGCAGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAATCGGACGAATTGAACTAGTCCAGAAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420196.5
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTTGTTTTCTTCATCTaGTTCAATTGCAGACTTCCT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVVFFI*FNCRLP
Trigger: AGGAAGTCTGCAATTGAACAAGATGAAGAAAACAAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTTACAGCTACATGTTaGTCGTTGTTTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVTATC*SLFSSS
Trigger: AGATGAAGAAAACAACGACAAACATGTAGCTGTAAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGT +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASQDALV*LFNLNS
Trigger: ACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTG...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGGGTCTCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRVSVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGAGACCCT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTAGGGTCTCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFRVSVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGAGACCCT...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTACCAGCTGCACTCGCTaGCCCAGCTGGCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPTSCTR*PSWLQS
Trigger: GCTCTGCAGCCAGCTGGGCAAGCGAGTGCAGCTGGT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGCAGTTGGTGAGTGTTaGCAATGTGTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASAVGEC*QCVRHC
Trigger: ACAGTGCCTGACACATTGCAAACACTCACCAACTGC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGAGCCCACTTAGAAGTGCCCCTGCACCACCTGGTGCCGAAGGTGCCAGATTAGTGGATTTCATTATTTaGACCCATAGGCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: KSPLRSAPAPPGAEGARLVDFII*THRLFC
Trigger: ACAAAACAGCCTATGGGTCAAAATAATGAAATCCAC...TAATCTGGCACCTTCGGCACCAGGTGGTGCAGGGGCACTTCTAAGTGGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATGCGTGAGGAGGGCTTaGGAGGGTTTGCTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDECVRRA*EGLLSP
Trigger: TGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGGTGAGAACACGTGCTaGTGCTGTAAGCCCATGCTA +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYGENTC*CCKPML
Trigger: TAGCATGGGCTTACAGCACAAGCACGTGTTCTCACC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGTAGCTTCATCTGGCTaGGTGGGCATATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASVASSG*VGISDL
Trigger: CAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAATGGAAAAGCAAATCTaGACTGCACAAAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHAMEKQI*TAQNPP
Trigger: GGGAGGATTTTGTGCAGTCAAGATTTGCTTTTCCAT...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTCCCGGACACCACCACATATCTGTCAGAGAGCAGAGAGTCCACTGAGTCATCCTTCATATCATTTTCTTaGTACAGCTACTTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: VPDTTTYLSESRESTESSFISFS*YSYFPG
Trigger: CCCTGGGAAGTAGCTGTACAAAGAAAATGATATGAA...GGATGACTCAGTGGACTCTCTGCTCTCTGACAGATATGTGGTGGTGTCCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TGTACAGAGCAATCCACTGGGAAACAAGATGCAAGACTTTACGTTTCCTACGCGTCTTCCCCACTTAGGTaGGTGCTAGGAGAGTCAAGC +
Preference number: 5 (lower is better)
Translates to: CTEQSTGKQDARLYVSYASSPLR*VLGESS
Trigger: GCTTGACTCTCCTAGCACCAACCTAAGTGGGGAAGA...CGCGTAGGAAACGTAAAGTCTTGCATCTTGTTTCCCAGTGGATTGCTCTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS TCA 90 bp TGCACTTTCTTCAGCACCAGGACGCTCTGGTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCATCTTGGTGTTCAGACTTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: CTFFSTRTLWSCSLT*TVVTSSSWCSDFSC
Trigger: ACAGGAGAAGTCTGAACACCAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000420196.5
ENST00000475788.1
ENST00000665637.1
CDS GCA 90 bp CAGCTGGCTGCAGAGCAGAATCTCTTGGGCTATACTGGAAACTTTTaGCTTCACACTGACATAGGAGTGCTCTGTTATATACACGTGGCA +
Preference number: 5 (lower is better)
Translates to: QLAAEQNLLGYTGNF*LHTDIGVLCYIHVA
Trigger: TGCCACGTGTATATAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGATTCTGCTCTGCAGCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620335.4
CDS CCA 90 bp AATCCATGTAAATTACTTTATTTCCATTTTATGTGCCCCTCACCATaGGACTCCAAGGCTCACCTCCCAGGTCTGCGACAGTCGACTGAC +
Preference number: 5 (lower is better)
Translates to: NPCKLLYFHFMCPSP*DSKAHLPGLRQSTD
Trigger: GTCAGTCGACTGTCGCAGACCTGGGAGGTGAGCCTTGGAGTCCCATGGTGAGGGGCACATAAAATGGAAATAAAGTAATTTACATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468825.1
CDS-3UTR CAA 90 bp CAAATGAGGGTCAAAGACCCTCAGCCGGGAGCTGCCCATTGTGAACGGTTACTACTTCATCTTGTTCAATaGCAGACTTCCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: QMRVKDPQPGAAHCERLLLHLVQ*QTSLLS
Trigger: TGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAAG...TAGTAACCGTTCACAATGGGCAGCTCCCGGCTGAGGGTCTTTGACCCTCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGGGTCTCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYRVSVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGAGACCCT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGGGTCTCTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRVSVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGAGACCCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACTGACAGAAGCAGTGTaGAGACCCATCACAATGGCA +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKLTEAV*RPITMA
Trigger: TGCCATTGTGATGGGTCTCAACACTGCTTCTGTCAG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGCAGTTGGTGAGTGTTaGCAATGTGTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKAVGEC*QCVRHC
Trigger: ACAGTGCCTGACACATTGCAAACACTCACCAACTGC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGCAGTTGGTGAGTGTTaGCAATGTGTCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYAVGEC*QCVRHC
Trigger: ACAGTGCCTGACACATTGCAAACACTCACCAACTGC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAGGTGAGAACACGTGCTaGTGCTGTAAGCCCATGCTA +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIGENTC*CCKPML
Trigger: TAGCATGGGCTTACAGCACAAGCACGTGTTCTCACC...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTGGGCATATCTGACTaGGGGTCTGAGCAGCATGCA +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSVGISD*GSEQHA
Trigger: TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCAC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAGTAGCTTCATCTGGCTaGGTGGGCATATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKVASSG*VGISDL
Trigger: CAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GCTATTGTTAGTAACTGCGTGAGGAGGGCTTTGGAGGGTTTGCTCAGCCCAGCCTCTCACAATTCGGGCTaGAATTCTTTAATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: AIVSNCVRRALEGLLSPASHNSG*NSLIPD
Trigger: ATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA...GGCTGGGCTGAGCAAACCCTCCAAAGCCCTCCTCACGCAGTTACTAACAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGCAAGGTTGTGATTTaGCCTACGGGGTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKSKVVI*PTGSCI
Trigger: AATGCAGGACCCCGTAGGCAAAATCACAACCTTGCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTCTGAAAAGCCTGGATaGGCTGCGCCATTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSSEKPG*AAPFRN
Trigger: GTTCCTAAATGGCGCAGCCAATCCAGGCTTTTCAGA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATCTGAAAAGCCTGGATaGGCTGCGCCATTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKSEKPG*AAPFRN
Trigger: GTTCCTAAATGGCGCAGCCAATCCAGGCTTTTCAGA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAAAAGAAATCCTGTGTaGGACCACTGCGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKKRNPV*DHCGRP
Trigger: GGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTTT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 90 bp AACATGCCTGACCTGCTCAGGTCATTAGATGCACTTAGAACTCAATaGGGGACACTCCTTCACCAGGAAATCGTATCTGAACACACCATC +
Preference number: 5 (lower is better)
Translates to: NMPDLLRSLDALRTQ*GTLLHQEIVSEHTI
Trigger: GATGGTGTGTTCAGATACGATTTCCTGGTGAAGGAGTGTCCCTCATTGAGTTCTAAGTGCATCTAATGACCTGAGCAGGTCAGGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471484.1
CDS GCA 90 bp TACACGTGGCAGAAAATTTCCTCCGTTTCAGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTAAGACTGAATTGGTGGAAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: YTWQKISSVSVTVPL*WSQFSLRLNWWKRA
Trigger: AGCCCTTTTCCACCAATTCAGTCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGACTGAAACGGAGGAAATTTTCTGCCACGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000458533.5
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GTAGCTTCATCTGGCTTGGTGGGCATATCTGACTTGGGGTCTGAGCAGCATGCAGTTGTTTTCTTCATCTaGTTCAATTGCAGACTTCCT +
Preference number: 5 (lower is better)
Translates to: VASSGLVGISDLGSEQHAVVFFI*FNCRLP
Trigger: AGGAAGTCTGCAATTGAACAAGATGAAGAAAACAAC...TGCATGCTGCTCAGACCCCAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAACGTCACTTCATCATCTaGGTGTTCAGACTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRHFII*VFRLLL
Trigger: CAGGAGAAGTCTGAACACCAAGATGATGAAGTGACG...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCAAAGCTGGACCTCATaGCATCTCTGGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSQSWTS*HLWSRR
Trigger: CCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATTTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYLHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTTTGCATGTCAAGACGTaGTCTTGTCTTGATGCTGGC +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSLHVKT*SCLDAG
Trigger: GCCAGCATCAAGACAAGACAACGTCTTGACATGCAA...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGATGCACACCTTGACATaGTTCATCTGCCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKMHTLT*FICPSE
Trigger: CTCTGATGGGCAGATGAACAATGTCAAGGTGTGCAT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAAAAGAAATCCTGTGTaGGACCACTGCGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIKRNPV*DHCGRP
Trigger: GGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAACAGTTTGTAAACCACTaGGAAAAAGGCAGAAGTTGC +
Preference number: 5 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEQFVNH*EKGRSC
Trigger: GCAACTTCTGCCTTTTTCCAAGTGGTTTACAAACTG...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS TCA 90 bp TCCGGTAGACATATATTCGACCAGATGCCTCGAGGGATTTGGAGATaGCTAAGTCATTTGGCTGAAGTTCATGCTTTTCCCCAGAGAATG +
Preference number: 5 (lower is better)
Translates to: SGRHIFDQMPRGIWR*LSHLAEVHAFPQRM
Trigger: CATTCTCTGGGGAAAAGCATGAACTTCAGCCAAATGACTTAGTCATCTCCAAATCCCTCGAGGCATCTGGTCGAATATATGTCTACCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS GCA 90 bp GACAGTTCACAGATGCCACCTCTGGCAGGAATGAGAGGCACAAGTTaGAGTAAAAGCTTGACACCATTTTGCCATTCTTCTTCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: DSSQMPPLAGMRGTS*SKSLTPFCHSSSLS
Trigger: TGAAAGAGAAGAAGAATGGCAAAATGGTGTCAAGCTTTTACTGCAACTTGTGCCTCTCATTCCTGCCAGAGGTGGCATCTGTGAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000665637.1
CDS GCA 90 bp AGAGCAAGATCCCAAGTGTTCATTCCCAAAATCCTCATCGACCTTTaGTGTGATTCCTCATTTTCTGCAAATGGGTTCAAAGTGTCCGCC +
Preference number: 5 (lower is better)
Translates to: RARSQVFIPKILIDL*CDSSFSANGFKVSA
Trigger: GGCGGACACTTTGAACCCATTTGCAGAAAATGAGGAATCACAGCAAAGGTCGATGAGGATTTTGGGAATGAACACTTGGGATCTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGATGCCTCGAGGGATTaGGAGATGACTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYDASRD*EMTKSF
Trigger: AAATGACTTAGTCATCTCCAAATCCCTCGAGGCATC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACAAAGCTGGACCTCATaGCATCTCTGGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEQSWTS*HLWSRR
Trigger: CCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATACTCTTGATGCTCTTTaGGAGACAGGTCACCAAACT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYTLDAL*ETGHQT
Trigger: AGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAGT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTACTCTTGATGCTCTTTaGGAGACAGGTCACCAAACT +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSTLDAL*ETGHQT
Trigger: AGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAGT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRLPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCTTCCTGAACACGCTTaGGCTGGCTTTCCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSLPEHA*AGFPVN
Trigger: ATTCACAGGAAAGCCAGCCAAAGCGTGTTCAGGAAG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYRHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKRHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGGCAACTTCATCTACCTaGCCTATAGCTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKATSST*PIAANQ
Trigger: CTGATTTGCAGCTATAGGCAAGGTAGATGAAGTTGC...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACCAAGACTCCTGCATTaGGAAAATGAATGGACCAGG +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIPRLLH*ENEWTR
Trigger: CCTGGTCCATTCATTTTCCAAATGCAGGAGTCTTGG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGGTGAGAACACGTGCTaGTGCTGTAAGCCCATGCTA +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEGENTC*CCKPML
Trigger: TAGCATGGGCTTACAGCACAAGCACGTGTTCTCACC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGTAGCTTCATCTGGCTaGGTGGGCATATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRVASSG*VGISDL
Trigger: CAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGAGCAAGGTTGTGATTTaGCCTACGGGGTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRSKVVI*PTGSCI
Trigger: AATGCAGGACCCCGTAGGCAAAATCACAACCTTGCT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp GGGATCTACATGTGTCCATTTATTGGATTTAAACAAATCAGCACAAGGCAAGGGTTCCCAGGGAGCTGCTaGGGATCTACATGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GIYMCPFIGFKQISTRQGFPGSC*GSTCVH
Trigger: ATGGACACATGTAGATCCCAAGCAGCTCCCTGGGAA...CCCTTGCCTTGTGCTGATTTGTTTAAATCCAATAAATGGACACATGTAGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGCAGAGCAGAATCTCTaGGGCTATACTGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYAEQNL*GYTGNF
Trigger: AAAGTTTCCAGTATAGCCCAAGAGATTCTGCTCTGC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620335.4
CDS GCA 90 bp GCTCTCTCTGCACCGCAGATGTTAGACGCACAAGAATTTCATCACTaGTTTCTTCGGAGTCTTCAATTTTCTGATGAGACAGTTCACAGA +
Preference number: 5 (lower is better)
Translates to: ALSAPQMLDAQEFHH*FLRSLQFSDETVHR
Trigger: TCTGTGAACTGTCTCATCAGAAAATTGAAGACTCCGAAGAAAGCAGTGATGAAATTCTTGTGCGTCTAACATCTGCGGTGCAGAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000665637.1
CDS CCA 90 bp AGCACTGCACTATCAGGCAGGACAGAGGGGAAGACTAATTCTAGCTaGGGAGCACGTTACCATTTTTATCTAGTTCAGACACATTATACA +
Preference number: 5 (lower is better)
Translates to: STALSGRTEGKTNSS*GARYHFYLVQTHYT
Trigger: TGTATAATGTGTCTGAACTAGATAAAAATGGTAACGTGCTCCCCAGCTAGAATTAGTCTTCCCCTCTGTCCTGCCTGATAGTGCAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468825.1
CDS-3UTR CAA 90 bp CATCAGCTGCTATCAGTCTGGAAGCATGAGCTACTCAGAGCCTTACCTGTTTCTAGTTGCAGTAAAAGCTaGACACCATTTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: HQLLSVWKHELLRALPVSSCSKS*TPFCHS
Trigger: AGAATGGCAAAATGGTGTCAAGCTTTTACTGCAACT...AGAAACAGGTAAGGCTCTGAGTAGCTCATGCTTCCAGACTGATAGCAGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp ATAGTCTGCACCTCGGGGCTTGTTCTGACCAGGCAGTTTGTAAACCACTTGGAAGTTACAGCTACATGTTaGTCGTTGTTTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: IVCTSGLVLTRQFVNHLEVTATC*SLFSSS
Trigger: AGATGAAGAAAACAACGACAAACATGTAGCTGTAAC...TTCCAAGTGGTTTACAAACTGCCTGGTCAGAACAAGCCCCGAGGTGCAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGCTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKLAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGGATGAATGAGGCGTaGATGAGACAAAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRMNEA*MRQKGN
Trigger: GTTTCCTTTTTGTCTCATCAACGCCTCATTCATCCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAGTAGCTTCATCTGGCTaGGTGGGCATATCTGACTTG +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEVASSG*VGISDL
Trigger: CAAGTCAGATATGCCCACCAAGCCAGATGAAGCTAC...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTATGGAAAAGCAAATCTaGACTGCACAAAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSMEKQI*TAQNPP
Trigger: GGGAGGATTTTGTGCAGTCAAGATTTGCTTTTCCAT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 90 bp TGCACTTTCTTCAGCACCAGGACGCTCTGGTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCATCTTGTCCATCATTCAATTCAATT +
Preference number: 5 (lower is better)
Translates to: CTFFSTRTLWSCSLT*TVVTSSSCPSFNSI
Trigger: AATTGAATTGAATGATGGACAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458533.5
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTTATCAGGTCAGCTGCTaGAACGATAATAATATTCCT +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFYQVSC*NDNNIP
Trigger: AGGAATATTATTATCGTTCAAGCAGCTGACCTGATA...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp CTGTTTCTTTGTCCTGGACTTCTTCCAGGTGCAAGTCATTCAAAAGGTGCTCCAAAGCTTGACACCATTTaGCCATTCTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LFLCPGLLPGASHSKGAPKLDTI*PFFFSF
Trigger: GAAAGAGAAGAAGAATGGCAAAATGGTGTCAAGCTT...TGGAGCACCTTTTGAATGACTTGCACCTGGAAGAAGTCCAGGACAAAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAGTTGCAGTAAAAGCTaGACACCATTTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYSCSKS*TPFCHS
Trigger: AGAATGGCAAAATGGTGTCAAGCTTTTACTGCAACT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAGTTGCAGTAAAAGCTaGACACCATTTTGCCATTCT +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKSCSKS*TPFCHS
Trigger: AGAATGGCAAAATGGTGTCAAGCTTTTACTGCAACT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAACTGATAGTTTTCTTTaGCCAGCTTCTGGACTAGTT +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKTDSFL*PASGLV
Trigger: AACTAGTCCAGAAGCTGGCAAAAGAAAACTATCAGT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGACTGATAGTTTTCTTTaGCCAGCTTCTGGACTAGTT +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKTDSFL*PASGLV
Trigger: AACTAGTCCAGAAGCTGGCAAAAGAAAACTATCAGT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAGTGAAAGCCCAGCTCCAGGGATAAGAAGTCATCACTGGTACTCTCTCTTTCTACAGGAGCCTCAATaGGTAAAAATGGGAATAATA +
Preference number: 5 (lower is better)
Translates to: SSESPAPGIRSHHWYSLFLQEPQ*VKMGII
Trigger: TATTATTCCCATTTTTACCAATTGAGGCTCCTGTAG...AAAGAGAGAGTACCAGTGATGACTTCTTATCCCTGGAGCTGGGCTTTCACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTAACCTCTGGAGACAGTaGTTAAACTTCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSNLWRQ*LNFRKM
Trigger: CATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAACCTCTGGAGACAGTaGTTAAACTTCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKNLWRQ*LNFRKM
Trigger: CATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGAAAGAGCTTTCTGTaGAGTAATATCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: CIIRHKNADFCDSVTSASRKSFL*SNIWFS
Trigger: TGAGAACCAGATATTACTCAACAGAAAGCTCTTTCT...GCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATAAAAGGCAAGATTTCTaGCTTCAGGTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYKRQDF*LQVTDF
Trigger: GAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTTT...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 90 bp TCTCTAGTTAGAATCTCATCTAGGCTGAAATTCGGATGCCATGGATaGCTGCACAGACTTTCTTCACCTCAGTCCCTTTTTAAAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SLVRISSRLKFGCHG*LHRLSSPQSLFKKE
Trigger: CTCCTTTTTAAAAAGGGACTGAGGTGAAGAAAGTCTGTGCAGTCATCCATGGCATCCGAATTTCAGCCTAGATGAGATTCTAACTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458533.5
CDS TCA 90 bp AGAGCAGAATCTCTTGGGCTATACTGGAAACTTTTGCCTTCACACTaGCATAGGAGTGCTCTGTTATATACACGTGGCAGAAAATTTCCT +
Preference number: 5 (lower is better)
Translates to: RAESLGLYWKLLPSH*HRSALLYTRGRKFP
Trigger: AGGAAATTTTCTGCCACGTGTATATAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGATTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620335.4
CDS GCA 90 bp CAGGTCAGCTGCTTGAACGATAATAATATTCCTCAATGCTCTTCCTaGACAAGAAGAATTCTCTCCATAAATCTGGGAAGGCGTATGTTC +
Preference number: 5 (lower is better)
Translates to: QVSCLNDNNIPQCSS*TRRILSINLGRRMF
Trigger: GAACATACGCCTTCCCAGATTTATGGAGAGAATTCTTCTTGTGCAGGAAGAGCATTGAGGAATATTATTATCGTTCAAGCAGCTGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS-3UTR CAA 90 bp TTAAGAGAAGCAAGTACTCTCCCTTCTGAGATAAAGGAAGTTACAGGTAAGTCACGTCACTTCATCATCTaGGTGTTCAGACTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LREASTLPSEIKEVTGKSRHFII*VFRLLL
Trigger: CAGGAGAAGTCTGAACACCAAGATGATGAAGTGACG...TGACTTACCTGTAACTTCCTTTATCTCAGAAGGGAGAGTACTTGCTTCTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTCTGACAGAAGCAGTGTaGAGACCCATCACAATGGCA +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPLTEAV*RPITMA
Trigger: TGCCATTGTGATGGGTCTCAACACTGCTTCTGTCAG...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRLAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDERRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTCTCTCAAAGTTCTCCCAAACCTTCTCTCCACATGGTTCCTTCCAGCAGTATGTGGATTTCATTATTTaGACCCATAGGCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SLSKFSQTFSPHGSFQQYVDFII*THRLFC
Trigger: ACAAAACAGCCTATGGGTCAAAATAATGAAATCCAC...ATACTGCTGGAAGGAACCATGTGGAGAGAAGGTTTGGGAGAACTTTGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTGAATGGACCAGGCCCTaGCATTTTAGCAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPEWTRP*HFSKVT
Trigger: TGTCACCTTGCTAAAATGCAAGGGCCTGGTCCATTC...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTATGGAAAAGCAAATCTaGACTGCACAAAATCCTCCC +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSMEKQI*TAQNPP
Trigger: GGGAGGATTTTGTGCAGTCAAGATTTGCTTTTCCAT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAACCTCTGGAGACAGTaGTTAAACTTCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGINLWRQ*LNFRKM
Trigger: CATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAATCTCACAATTCGGGCTaGAATTCTTTAATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKSHNSG*NSLIPD
Trigger: ATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AAGCTCAGTGTGGTTCCTGAGCCCAGGAAACAGCACTGCTATAAAGATGTCAAAAGAAAGAGCTTTCTGTaGAGTAATATCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: KLSVVPEPRKQHCYKDVKRKSFL*SNIWFS
Trigger: TGAGAACCAGATATTACTCAACAGAAAGCTCTTTCT...TTTGACATCTTTATAGCAGTGCTGTTTCCTGGGCTCAGGAACCACACTGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTCACCTCAGCAAGCAGTAGAAAGAGCTTTCTGTaGAGTAATATCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: IIRHKNADFCDSVTSASSRKSFL*SNIWFS
Trigger: TGAGAACCAGATATTACTCAACAGAAAGCTCTTTCT...ACTGCTTGCTGAGGTGACAGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TCTTTTCTCACAGGAAAGCAACGTGCTTGGCATAGACATTCCCGTAGCTCAAAGAGAAAGAGCTTTCTGTaGAGTAATATCTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SFLTGKQRAWHRHSRSSKRKSFL*SNIWFS
Trigger: TGAGAACCAGATATTACTCAACAGAAAGCTCTTTCT...CTTTGAGCTACGGGAATGTCTATGCCAAGCACGTTGCTTTCCTGTGAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTTCTGAAAAGCCTGGATaGGCTGCGCCATTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPSEKPG*AAPFRN
Trigger: GTTCCTAAATGGCGCAGCCAATCCAGGCTTTTCAGA...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAAAAGAAATCCTGTGTaGGACCACTGCGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPKRNPV*DHCGRP
Trigger: GGGTCTTCCGCAGTGGTCCAACACAGGATTTCTTTT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATAAAAAGGCAAGATTTCTaGCTTCAGGTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGIKRQDF*LQVTDF
Trigger: GAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTTT...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAAGCTTGACACCATTTaGCCATTCTTCTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSKLDTI*PFFFSF
Trigger: GAAAGAGAAGAAGAATGGCAAAATGGTGTCAAGCTT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGCTCCTTAAGACTGAATaGGTGGAAAAGGGCTTTATT +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRLLKTE*VEKGFI
Trigger: AATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGAG...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCTCCTTAAGACTGAATaGGTGGAAAAGGGCTTTATT +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSLLKTE*VEKGFI
Trigger: AATAAAGCCCTTTTCCACCAATTCAGTCTTAAGGAG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTGGCACATCTCATATaGAAAACTGGACTGGATCAA +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELAHLI*KTGLDQ
Trigger: TTGATCCAGTCCAGTTTTCAATATGAGATGTGCCAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATACTACAGGAGCCTCAATaGGTAAAAATGGGAATAATA +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGILQEPQ*VKMGII
Trigger: TATTATTCCCATTTTTACCAATTGAGGCTCCTGTAG...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AATGTCAGGATGGCCTTATATGATTACACTGGCCAAACCTTAGTCCAGGGCATATCTCACAATTCGGGCTaGAATTCTTTAATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: NVRMALYDYTGQTLVQGISHNSG*NSLIPD
Trigger: ATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA...TATGCCCTGGACTAAGGTTTGGCCAGTGTAATCATATAAGGCCATCCTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTAAAAGGCAAGATTTCTaGCTTCAGGTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSKRQDF*LQVTDF
Trigger: GAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTTT...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGTATCAGGTCAGCTGCTaGAACGATAATAATATTCCT +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRYQVSC*NDNNIP
Trigger: AGGAATATTATTATCGTTCAAGCAGCTGACCTGATA...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp TGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCAGAGGCCTATATCAGGTCAGCTGCTaGAACGATAATAATATTCCT +
Preference number: 5 (lower is better)
Translates to: CILVKGSSCKMQATVRGLYQVSC*NDNNIP
Trigger: AGGAATATTATTATCGTTCAAGCAGCTGACCTGATA...TAGGCCTCTGACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAACTTCATCTTGTTCAATaGCAGACTTCCTTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDELHLVQ*QTSLLS
Trigger: TGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAAG...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTGTTACAGCTACATGTTaGTCGTTGTTTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSVTATC*SLFSSS
Trigger: AGATGAAGAAAACAACGACAAACATGTAGCTGTAAC...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344041.10
ENST00000665637.1
CDS-3UTR CAA 90 bp AGCAAACAGTGCATTTTAGTTAAGGGATCAAGTTGCAAAATGCAGGCTACAGTCACTGATAGTTTTCTTTaGCCAGCTTCTGGACTAGTT +
Preference number: 5 (lower is better)
Translates to: SKQCILVKGSSCKMQATVTDSFL*PASGLV
Trigger: AACTAGTCCAGAAGCTGGCAAAAGAAAACTATCAGT...GACTGTAGCCTGCATTTTGCAACTTGATCCCTTAACTAAAATGCACTGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTACTCTTGATGCTCTTTaGGAGACAGGTCACCAAACT +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPTLDAL*ETGHQT
Trigger: AGTTTGGTGACCTGTCTCCAAAAGAGCATCAAGAGT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAGACGTTGTCTTGTCTaGATGCTGGCACATCTCATA +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPRRCLV*MLAHLI
Trigger: TATGAGATGTGCCAGCATCAAGACAAGACAACGTCT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAGACACAAGTGGCTTTaGGTGATGTCACAGGTTGTA +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPRHKWL*VMSQVV
Trigger: TACAACCTGTGACATCACCAAAAGCCACTTGTGTCT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp ATGAGGTACGCAAAATGCATCATCAGGCACAAGAATGCAGACTTTTGTGACTCTCTACAGGAGCCTCAATaGGTAAAAATGGGAATAATA +
Preference number: 5 (lower is better)
Translates to: MRYAKCIIRHKNADFCDSLQEPQ*VKMGII
Trigger: TATTATTCCCATTTTTACCAATTGAGGCTCCTGTAG...AGAGTCACAAAAGTCTGCATTCTTGTGCCTGATGATGCATTTTGCGTACCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACAGCACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGGTGGATTTCATTATTTaGACCCATAGGCTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: NSTAIKMSKSIGHASVMRVDFII*THRLFC
Trigger: ACAAAACAGCCTATGGGTCAAAATAATGAAATCCAC...CCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAAAAAAGGCAAGATTTCTaGCTTCAGGTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDEKRQDF*LQVTDF
Trigger: GAAATCAGTGACCTGAAGCAAGAAATCTTGCCTTTT...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp AACTCCAGGGACACAAGGAAATTCTTGTTCCCACCTAAGCTGTCATTTCACAATATTTCACAATCCTTCTaGCATGGTAAAAACCTAAGG +
Preference number: 5 (lower is better)
Translates to: NSRDTRKFLFPPKLSFHNISQSF*HGKNLR
Trigger: CCTTAGGTTTTTACCATGCAAGAAGGATTGTGAAAT...ATTGTGAAATGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTCCCTGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp TTGAATGTTCATCTTCAGGTAACCAGTCTTTGTACAGAGCAATCCACTGGGAAAGTTTTCCTCTTTGCCTaGATACTTCTTAGCAGAATA +
Preference number: 5 (lower is better)
Translates to: LNVHLQVTSLCTEQSTGKVFLFA*ILLSRI
Trigger: TATTCTGCTAAGAAGTATCAAGGCAAAGAGGAAAAC...TTTCCCAGTGGATTGCTCTGTACAAAGACTGGTTACCTGAAGATGAACATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTATCAAGAGGTCTTATTaGCTACAGGAGCCTCAATTG +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPIKRSY*LQEPQL
Trigger: CAATTGAGGCTCCTGTAGCAAATAAGACCTCTTGAT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CACTGCTATAAAGATGTCAAAAAGCATTGGACACGCCTCAGTAATGAGGATGAATCTCACAATTCGGGCTaGAATTCTTTAATTCCAGAT +
Preference number: 5 (lower is better)
Translates to: HCYKDVKKHWTRLSNEDESHNSG*NSLIPD
Trigger: ATCTGGAATTAAAGAATTCAAGCCCGAATTGTGAGA...TTCATCCTCATTACTGAGGCGTGTCCAATGCTTTTTGACATCTTTATAGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGGACACAAGGAAATTCTaGTTCCCACCTAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LFIGITAPAWNKLQILVKDTRKF*FPPKLS
Trigger: TGACAGCTTAGGTGGGAACAAGAATTTCCTTGTGTC...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS-3UTR CAA 90 bp AATATTCATCTACAGTGTGACGACGGTGCATTCCAAGTATCTTTTGAAATTCTTGGTATAACTGTTTCTTaGTCCTGGACTTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NIHLQCDDGAFQVSFEILGITVS*SWTSSR
Trigger: CCTGGAAGAAGTCCAGGACAAAGAAACAGTTATACC...AAGAATTTCAAAAGATACTTGGAATGCACCGTCGTCACACTGTAGATGAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS-3UTR CAA 90 bp TTCATCTACCTTGCCTATAGCTGCAAATCAGTTGTACAGAAACTAATTTCACCTAACCTCTGGAGACAGTaGTTAAACTTCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: FIYLAYSCKSVVQKLISPNLWRQ*LNFRKM
Trigger: CATCTTTCTGAAGTTTAACAACTGTCTCCAGAGGTT...AGGTGAAATTAGTTTCTGTACAACTGATTTGCAGCTATAGGCAAGGTAGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS-3UTR CAA 90 bp CTATTCATTGGAATAACTGCTCCAGCATGGAACAAATTACAAATTCTGGTTAAGGTTGTTTTCTTCATCTaGTTCAATTGCAGACTTCCT +
Preference number: 5 (lower is better)
Translates to: LFIGITAPAWNKLQILVKVVFFI*FNCRLP
Trigger: AGGAAGTCTGCAATTGAACAAGATGAAGAAAACAAC...CTTAACCAGAATTTGTAATTTGTTCCATGCTGGAGCAGTTATTCCAATGAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS TCA 72 bp CCCGGCCCCCAGCGGCGCTCCGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCGCGGGCAGGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: PGPQRRSASSAA*ARSAAARAGPS
Trigger: TGAGGGACCTGCCCGCGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGCGGAGCGCCGCTGGGGGCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 72 bp TCCGGCCCCCAGCGGCGCTCCGCTTCCTCCGCAGCGTaGGCCCGCTCCGCAGCAGCGCGGGCAGGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: SGPQRRSASSAA*ARSAAARAGPS
Trigger: TGAGGGACCTGCCCGCGCTGCTGCGGAGCGGGCTCACGCTGCGGAGGAAGCGGAGCGCCGCTGGGGGCCGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000665637.1
CDS TCA 72 bp TGCATCTTGACGGAGCCCACGGCCATCCTCATGCCCTaGCGGCGCTGCGGCGCCGGGGGCTCCTCTCCACCG +
Preference number: 6 (lower is better)
Translates to: CILTEPTAILMP*RRCGAGGSSPP
Trigger: CGGTGGAGAGGAGCCCCCGGCGCCGCAGCGCCGTCAGGGCATGAGGATGGCCGTGGGCTCCGTCAAGATGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405243.1
ENST00000665637.1
CDS GCA 72 bp CCTCCGAGAAGAGGCAAACAGCTCGTCTTCAGCCGATaGCCGGTCCCGCAGCCTGAATCTGGGGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PPRRGKQLVFSR*PVPQPESGGPG
Trigger: CCCAGGGCCCCCAGATTCAGGCTGCGGGACCGGGCATCGGCTGAAGACGAGCTGTTTGCCTCTTCTCGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 72 bp ATGCGTCCTGCAAACAGGGATGCCGCTCGTGGGGCCTaGAGCTTGCGGTTGGGACAGGGCTGGCTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: MRPANRDAARGA*SLRLGQGWLAV
Trigger: AACAGCCAGCCAGCCCTGTCCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 72 bp TCCGCACTCCCAGCTGTGGGGGCTGGGCCACAGCACTaGACTTTCTTCAGCACCAGGACGCTCTGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SALPAVGAGPQH*TFFSTRTLWSC
Trigger: GCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCAGCCCCCACAGCTGGGAGTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000420196.5
ENST00000458533.5
ENST00000475788.1
ENST00000665637.1
CDS GCA 72 bp GGGACAGGGCTGGCTGGCTGTTGGACGCTGGACACCTaGAGCTTCCCCTCCGAGAAGAGGCAAACAGCTCGT +
Preference number: 6 (lower is better)
Translates to: GTGLAGCWTLDT*SFPSEKRQTAR
Trigger: ACGAGCTGTTTGCCTCTTCTCGGAGGGGAAGCTGCAGGTGTCCAGCGTCCAACAGCCAGCCAGCCCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 72 bp CAAGCACACACGTCGCATGCGTCCTGCAAACAGGGATaGCGCTCGTGGGGCCTGAAGCTTGCGGTTGGGACA +
Preference number: 6 (lower is better)
Translates to: QAHTSHASCKQG*RSWGLKLAVGT
Trigger: TGTCCCAACCGCAAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGTGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 72 bp TTGCGGTTGGGACAGGGCTGGCTGGCTGTTGGACGCTaGACACCTGCAGCTTCCCCTCCGAGAAGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: LRLGQGWLAVGR*TPAASPPRRGK
Trigger: TTTGCCTCTTCTCGGAGGGGAAGCTGCAGGTGTCCAGCGTCCAACAGCCAGCCAGCCCTGTCCCAACCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 72 bp CAAGAGCTTCCGACTCCTGGGTCTGCCCCTCGGCGGTaGAGACCACCAAAACCAGTCTCGATGCCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: QELPTPGSAPRR*RPPKPVSMPRA
Trigger: AGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCACCGCCGAGGGGCAGACCCAGGAGTCGGAAGCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 72 bp CAAAGGTGCCGCCAAACCCTGGTGAGCAGGGAAATCTaGGTAAGTCAGCTCTGTGTCCTGAGGCCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: QRCRQTLVSREI*VSQLCVLRPWR
Trigger: CCGCCAGGGCCTCAGGACACAGAGCTGACTTACTCAGATTTCCCTGCTCACCAGGGTTTGGCGGCACCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471484.1
CDS GCA 72 bp CCTCACCATGGGACTCCAAGGCTCACCTCCCAGGTCTaGGACAGTCGACTGACAGAAGCAGTGTTGAGACCC +
Preference number: 6 (lower is better)
Translates to: PHHGTPRLTSQV*DSRLTEAVLRP
Trigger: GGGTCTCAACACTGCTTCTGTCAGTCGACTGTCGCAGACCTGGGAGGTGAGCCTTGGAGTCCCATGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468825.1
CDS GCA 72 bp GCACCTCCAAAACAAGCACACACGTCGCATGCGTCCTaGAAACAGGGATGCCGCTCGTGGGGCCTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: APPKQAHTSHAS*KQGCRSWGLKL
Trigger: AAGCTTCAGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 72 bp TGCAACAGCACCTCCAAAACAAGCACACACGTCGCATaGGTCCTGCAAACAGGGATGCCGCTCGTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: CNSTSKTSTHVA*VLQTGMPLVGP
Trigger: AGGCCCCACGAGCGGCATCCCTGTTTGCAGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CCA 72 bp CTCGCTTGCCCAGCTGGCTGCAGAGCAGAATCTCCGTaGCCACCCAAAGCTGGACCTCATTGCATCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LACPAGCRAESP*PPKAGPHCISG
Trigger: TCCAGAGATGCAATGAGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCTCTGCAGCCAGCTGGGCAAGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000468825.1
ENST00000665637.1
CDS CAA 90 bp CCCTCGGCGGTGGAGACCACCAAAACCAGTCTCGATGCCCAGAGCTaGCAACAGCACCTCCAAAACAAGCACACACGTCGCATGCGTCCT +
Preference number: 6 (lower is better)
Translates to: PSAVETTKTSLDAQS*QQHLQNKHTRRMRP
Trigger: AGGACGCATGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCACCGCCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS GCA 72 bp CGTGCTTGGCATAGACATTCCCGTAGCTCAAAGTGCTaGAGATACAGGGGAGGTGAGGCAGTGGGGCTCACA +
Preference number: 6 (lower is better)
Translates to: RAWHRHSRSSKC*RYRGGEAVGLT
Trigger: TGTGAGCCCCACTGCCTCACCTCCCCTGTATCTGCAGCACTTTGAGCTACGGGAATGTCTATGCCAAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS CCA 72 bp GCCATCCCTGTCCTTTCACTGGGAACTGAGTCCATCTaGCTGCTAAGAGCTCTGCAGTCAGCTAGAACGCTG +
Preference number: 6 (lower is better)
Translates to: AIPVLSLGTESI*LLRALQSARTL
Trigger: CAGCGTTCTAGCTGACTGCAGAGCTCTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401957.6
CDS CCA 72 bp GCCATCCCTGTCCTTTCACTGGGAACTGAGTCCATCTaGCTGCTAAGAGCTCTGCAGTCAGCTAGAACGCTC +
Preference number: 6 (lower is better)
Translates to: AIPVLSLGTESI*LLRALQSARTL
Trigger: GAGCGTTCTAGCTGACTGCAGAGCTCTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405243.1
CDS CAA 72 bp GTCATCCAGGAGGGTCTCCCTTCTTCCCCACTTAGGTaGGTGCTAGGAGAGTCAAGCCATGAAGTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: VIQEGLPSSPLR*VLGESSHEVLV
Trigger: GACCAGGACTTCATGGCTTGACTCTCCTAGCACCAACCTAAGTGGGGAAGAAGGGAGACCCTCCTGGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451559.1
CDS CAA 72 bp GTGGAGACCACCAAAACCAGTCTCGATGCCCAGAGCTaGCAACAGCACCTCCAAAACAAGCACACACGTCGC +
Preference number: 6 (lower is better)
Translates to: VETTKTSLDAQS*QQHLQNKHTRR
Trigger: GCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS TCA 72 bp GAGTCAAGCCATGAAGTCCTGGTCCGCTTGGCTTTGTaGGCACATGGCAGAAGTGACACATGTGATCCCAGG +
Preference number: 6 (lower is better)
Translates to: ESSHEVLVRLAL*AHGRSDTCDPR
Trigger: CCTGGGATCACATGTGTCACTTCTGCCATGTGCTCACAAAGCCAAGCGGACCAGGACTTCATGGCTTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451559.1
ENST00000475788.1
CDS GCA 72 bp TGGAGACCACCAAAACCAGTCTCGATGCCCAGAGCTTaGAACAGCACCTCCAAAACAAGCACACACGTCGCA +
Preference number: 6 (lower is better)
Translates to: WRPPKPVSMPRA*NSTSKTSTHVA
Trigger: TGCGACGTGTGTGCTTGTTTTGGAGGTGCTGTTGCAAGCTCTGGGCATCGAGACTGGTTTTGGTGGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497668.1
CDS CAA 72 bp AGCAGAATCTCCGTGGCCACCCAAAGCTGGACCTCATaGCATCTCTGGAGCAGAAGGCTGAGATTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: SRISVATQSWTS*HLWSRRLRFAV
Trigger: CACTGCAAATCTCAGCCTTCTGCTCCAGAGATGCAATGAGGTCCAGCTTTGGGTGGCCACGGAGATTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000468825.1
ENST00000665637.1
CDS CAA 72 bp GGGGCAAGGTCACCCCTGCTAAACTCACCAGTGATTTaGAGCCAATGGACAAGCAAAGCAAGACACTGTGGG +
Preference number: 6 (lower is better)
Translates to: GARSPLLNSPVI*SQWTSKARHCG
Trigger: CCCACAGTGTCTTGCTTTGCTTGTCCATTGGCTCAAAATCACTGGTGAGTTTAGCAGGGGTGACCTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488366.1
CDS CAA 90 bp TGGGCCACAGCACTGCACTTTCTTCAGCACCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGTCGTCACTTCATCATCTTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: WATALHFLQHQDALV*LFNLNSRHFIILVF
Trigger: GAACACCAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000420196.5
ENST00000475788.1
ENST00000665637.1
CDS CAA 90 bp TGGGCCACAGCACTGCACTTTCTTCAGCACCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGTCGTCACTTCATCATCTTGTCCATC +
Preference number: 6 (lower is better)
Translates to: WATALHFLQHQDALV*LFNLNSRHFIILSI
Trigger: GATGGACAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCAGTGCTGTGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458533.5
CDS TCA 72 bp AAAAGATCTTGCCATCCCTGTCCTTTCACTGGGAACTaGGTCCATCTGGCTGCTAAGAGCTCTGCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: KRSCHPCPFTGN*VHLAAKSSAVS
Trigger: GCTGACTGCAGAGCTCTTAGCAGCCAGATGGACTCAGTTCCCAGTGAAAGGACAGGGATGGCAAGATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401957.6
ENST00000405243.1
CDS CCA 72 bp AGGAGTTGCCAGACTCCTATGGCCATAGATCTGCACTaGACGAAAGGACAGTGTTCTAGAAGCCAGTCTACC +
Preference number: 6 (lower is better)
Translates to: RSCQTPMAIDLH*TKGQCSRSQST
Trigger: GGTAGACTGGCTTCTAGAACACTGTCCTTTCGTCCAGTGCAGATCTATGGCCATAGGAGTCTGGCAACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS CCA 72 bp GTGATGGCCACCAGAGCCAGATCCTCTTCTGCATACTaGATCTTTTCTGCCACGACTTTTAGGATCTCTTGG +
Preference number: 6 (lower is better)
Translates to: VMATRARSSSAY*IFSATTFRISW
Trigger: CCAAGAGATCCTAAAAGTCGTGGCAGAAAAGATCCAGTATGCAGAAGAGGATCTGGCTCTGGTGGCCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000665637.1
CDS CAA 72 bp GCACTGCACTTTCTTCAGCACCAGGACGCTCTGGTCTaGCTCTTTAACCTGAACAGTCGTCACTTCATCATC +
Preference number: 6 (lower is better)
Translates to: ALHFLQHQDALV*LFNLNSRHFII
Trigger: GATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAAGAAAGTGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000420196.5
ENST00000458533.5
ENST00000475788.1
ENST00000665637.1
CDS TCA 72 bp TTCAGCACCAGGACGCTCTGGTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCATCTTGGTGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: FSTRTLWSCSLT*TVVTSSSWCSD
Trigger: GTCTGAACACCAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000420196.5
ENST00000475788.1
ENST00000665637.1
CDS GCA 72 bp TCCACTGATAACATAATTCCCATGTCCAGTAGGAGTTaGCAGACTCCTATGGCCATAGATCTGCACTGGACG +
Preference number: 6 (lower is better)
Translates to: STDNIIPMSSRS*QTPMAIDLHWT
Trigger: CGTCCAGTGCAGATCTATGGCCATAGGAGTCTGGCAACTCCTACTGGACATGGGAATTATGTTATCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS TCA 72 bp TTCAGCACCAGGACGCTCTGGTCTTGCTCTTTAACCTaGACAGTCGTCACTTCATCATCTTGTCCATCATTC +
Preference number: 6 (lower is better)
Translates to: FSTRTLWSCSLT*TVVTSSSCPSF
Trigger: GAATGATGGACAAGATGATGAAGTGACGACTGTTCAGGTTAAAGAGCAAGACCAGAGCGTCCTGGTGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458533.5
CDS CCA 72 bp TGGACTAGTTCAATTCGTCCGATTTCATCTCTTTCCTaGAGCTTGCACATCACCCCTGCCTTAAGAGTTGGA +
Preference number: 6 (lower is better)
Translates to: WTSSIRPISSLS*SLHITPALRVG
Trigger: TCCAACTCTTAAGGCAGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAATCGGACGAATTGAACTAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420196.5
CDS TCA 72 bp GACCTGCTCAGGTCATTAGATGCACTTAGAACTCAATaGGGGACACTCCTTCACCAGGAAATCGTATCTGAA +
Preference number: 6 (lower is better)
Translates to: DLLRSLDALRTQ*GTLLHQEIVSE
Trigger: TTCAGATACGATTTCCTGGTGAAGGAGTGTCCCTCATTGAGTTCTAAGTGCATCTAATGACCTGAGCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471484.1
CDS GCA 72 bp CAGAAAATTTCCTCCGTTTCAGTCACAGTTCCTCTATaGTGGAGCCAGTTCTCCTTAAGACTGAATTGGTGG +
Preference number: 6 (lower is better)
Translates to: QKISSVSVTVPL*WSQFSLRLNWW
Trigger: CCACCAATTCAGTCTTAAGGAGAACTGGCTCCAGCATAGAGGAACTGTGACTGAAACGGAGGAAATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000458533.5
ENST00000620335.4
ENST00000665637.1
CDS CCA 72 bp CTATCAGGCAGGACAGAGGGGAAGACTAATTCTAGCTaGGGAGCACGTTACCATTTTTATCTAGTTCAGACA +
Preference number: 6 (lower is better)
Translates to: LSGRTEGKTNSS*GARYHFYLVQT
Trigger: TGTCTGAACTAGATAAAAATGGTAACGTGCTCCCCAGCTAGAATTAGTCTTCCCCTCTGTCCTGCCTGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468825.1
CDS CAA 90 bp TTCTGGACTAGTTCAATTCGTCCGATTTCATCTCTTTCCTGGAGCTaGCACATCACCCCTGCCTTAAGAGTTGGAGAAAAAGCGAAGATA +
Preference number: 6 (lower is better)
Translates to: FWTSSIRPISSLSWS*HITPALRVGEKAKI
Trigger: TATCTTCGCTTTTTCTCCAACTCTTAAGGCAGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAATCGGACGAATTGAACTAGTCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420196.5
CDS TCA 72 bp TCTCTTGGGCTATACTGGAAACTTTTGCCTTCACACTaGCATAGGAGTGCTCTGTTATATACACGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: SLGLYWKLLPSH*HRSALLYTRGR
Trigger: TCTGCCACGTGTATATAACAGAGCACTCCTATGTCAGTGTGAAGGCAAAAGTTTCCAGTATAGCCCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000620335.4
ENST00000665637.1
CDS TCA 72 bp AGAATCTCATCTAGGCTGAAATTCGGATGCCATGGATaGCTGCACAGACTTTCTTCACCTCAGTCCCTTTTT +
Preference number: 6 (lower is better)
Translates to: RISSRLKFGCHG*LHRLSSPQSLF
Trigger: AAAAAGGGACTGAGGTGAAGAAAGTCTGTGCAGTCATCCATGGCATCCGAATTTCAGCCTAGATGAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458533.5
CDS GCA 72 bp GTTAGTCCTGCAGTGTCTCAGGGTTCGGACAGTGTCTaGGATCATATGCAGCTTTTCAAAATTGACAAGATT +
Preference number: 6 (lower is better)
Translates to: VSPAVSQGSDSV*DHMQLFKIDKI
Trigger: AATCTTGTCAATTTTGAAAAGCTGCATATGATCGCAGACACTGTCCGAACCCTGAGACACTGCAGGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344041.10
ENST00000401957.6
ENST00000488366.1
ENST00000620335.4
ENST00000665637.1
CDS CAA 72 bp AGTTCAATTCGTCCGATTTCATCTCTTTCCTGGAGCTaGCACATCACCCCTGCCTTAAGAGTTGGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: SSIRPISSLSWS*HITPALRVGEK
Trigger: TTTTTCTCCAACTCTTAAGGCAGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAATCGGACGAATTGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420196.5
CDS GCA 72 bp GCACCGCAGATGTTAGACGCACAAGAATTTCATCACTaGTTTCTTCGGAGTCTTCAATTTTCTGATGAGACA +
Preference number: 6 (lower is better)
Translates to: APQMLDAQEFHH*FLRSLQFSDET
Trigger: TGTCTCATCAGAAAATTGAAGACTCCGAAGAAAGCAGTGATGAAATTCTTGTGCGTCTAACATCTGCGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000665637.1
CDS GCA 72 bp GATTTCATCTCTTTCCTGGAGCTTGCACATCACCCCTaGCTTAAGAGTTGGAGAAAAAGCGAAGATATACTT +
Preference number: 6 (lower is better)
Translates to: DFISFLELAHHP*LKSWRKSEDIL
Trigger: AAGTATATCTTCGCTTTTTCTCCAACTCTTAAGGCAGGGGTGATGTGCAAGCTCCAGGAAAGAGATGAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420196.5
CDS CAA 72 bp CTTGAGGTTCACTCTGTCCTTTATCAGGTCAGCTGCTaGAACGATAATAATATTCCTCAATGCTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LEVHSVLYQVSC*NDNNIPQCSSC
Trigger: GCAGGAAGAGCATTGAGGAATATTATTATCGTTCAAGCAGCTGACCTGATAAAGGACAGAGTGAACCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS TCA 72 bp TTGAGGTTCACTCTGTCCTTTATCAGGTCAGCTGCTTaGACGATAATAATATTCCTCAATGCTCTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: LRFTLSFIRSAA*TIIIFLNALPA
Trigger: TGCAGGAAGAGCATTGAGGAATATTATTATCGTTCAAGCAGCTGACCTGATAAAGGACAGAGTGAACCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1
CDS TCA 72 bp TGTAAAGTCACTCTTCACAGCATAAACTTGCTGCCATaGGGGGATAATAATCTGCCATATCTTGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: CKVTLHSINLLP*GDNNLPYLVFL
Trigger: GAGGAAGACAAGATATGGCAGATTATTATCCCCTCATGGCAGCAAGTTTATGCTGTGAAGAGTGACTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488366.1
CDS CAA 90 bp GAATCTGGAACACTTTCGGCTTCTGTTACAGCTACATGTTTGTCGTaGTTTTCTTCATCTTGTTCAATTGCAGACTTCCTTGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: ESGTLSASVTATCLS*FSSSCSIADFLAFK
Trigger: TTTGAAAGCAAGGAAGTCTGCAATTGAACAAGATGAAGAAAACAACGACAAACATGTAGCTGTAACAGAAGCCGAAAGTGTTCCAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000475788.1
ENST00000665637.1
CDS GCA 72 bp TGCTTGAACGATAATAATATTCCTCAATGCTCTTCCTaGACAAGAAGAATTCTCTCCATAAATCTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: CLNDNNIPQCSS*TRRILSINLGR
Trigger: CCTTCCCAGATTTATGGAGAGAATTCTTCTTGTGCAGGAAGAGCATTGAGGAATATTATTATCGTTCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344041.10
ENST00000405243.1
ENST00000471484.1
ENST00000665637.1