RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000091428

Ensembl transcript IDs: ENST00000397081.8, ENST00000397085.3, ENST00000397087.7, ENST00000409036.5, ENST00000459852.1, ENST00000464976.1, ENST00000466030.1, ENST00000473003.5, ENST00000473043.5, ENST00000484331.5, ENST00000484645.1, ENST00000535187.5, ENST00000538974.5, ENST00000540783.5

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTaGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAA +
Preference number: 1 (lower is better)
Translates to: LASSLDKAISTKLFT*ALFNTSAKKMAQVE
Trigger: TTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 2 (lower is better)
Translates to: CQGLASSLDKAISTKLFTWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 2 (lower is better)
Translates to: ASSLDKAISTKLFTWALFWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 2 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 2 (lower is better)
Translates to: ASSLDKAISTKLFTWALFIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 3 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR TCA 72 bp TCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATaGAACAGGGTAGCCACAAACTGGGGATTCCTAAGC +
Preference number: 3 (lower is better)
Translates to: STLQQRRWHKWK*NRVATNWGFLS
Trigger: GCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 3 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 3 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 3 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: CQGLASSLDKAISTKLFTGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 3 (lower is better)
Translates to: ASSLDKAISTKLFTWALFTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 3 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
3UTR CCA 72 bp TCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTaGGCCTTATTCAACACTTCAGCAAAGAAGATGGCA +
Preference number: 3 (lower is better)
Translates to: SLDKAISTKLFT*ALFNTSAKKMA
Trigger: TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTCCTCCCGGACGCCTaGCGACCAGCGCGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLLPDA*RPARLR
Trigger: TCGCAGCCGCGCTGGTCGCCAGGCGTCCGGGAGGAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEEPRIG*RFWALS
Trigger: TGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGTCGGGGCCCATCTGTaGCAGCAGCAGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTVGAHL*QQQHGV
Trigger: GACACCATGCTGCTGCTGTCACAGATGGGCCCCGAC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGTCGGGGCCCATCTGTaGCAGCAGCAGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELVGAHL*QQQHGV
Trigger: GACACCATGCTGCTGCTGTCACAGATGGGCCCCGAC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTCGGGGCCCATCTGTaGCAGCAGCAGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVGAHL*QQQHGV
Trigger: GACACCATGCTGCTGCTGTCACAGATGGGCCCCGAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTGGCAGTTGCTCCTTaGGGGCAGCAATCATCCGGG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLAVAP*GQQSSG
Trigger: CCCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQEPRIG*RFWALS
Trigger: TGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELEPRIG*RFWALS
Trigger: TGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTCGGGGCCCATCTGTaGCAGCAGCAGCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVGAHL*QQQHGV
Trigger: GACACCATGCTGCTGCTGTCACAGATGGGCCCCGAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGGATCATCCTCATGTaGGCGTCGGGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGRIILM*ASGPIC
Trigger: ACAGATGGGCCCCGACGCCCACATGAGGATGATCCT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFEPRIG*RFWALS
Trigger: TGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAEPRIG*RFWALS
Trigger: TGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTTCCTTCACCGAAGTaGCCACTGGCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLPSPK*PLAPEW
Trigger: CCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTGGCAGTTGCTCCTTaGGGGCAGCAATCATCCGGG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLAVAP*GQQSSG
Trigger: CCCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTGGCAGTTGCTCCTTaGGGGCAGCAATCATCCGGG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALAVAP*GQQSSG
Trigger: CCCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTCCTTCATGCAGGGTaGAGACCACACCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLLHAG*RPHPCR
Trigger: ACGGCAAGGGTGTGGTCTGCACCCTGCATGAAGGAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCTCCTTCATGCAGGGTaGAGACCACACCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLLHAG*RPHPCR
Trigger: ACGGCAAGGGTGTGGTCTGCACCCTGCATGAAGGAG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTAGTGGGCCACCAGTaGCGGGCAAAGCTGGGTATT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVVGHQ*RAKLGI
Trigger: AATACCCAGCTTTGCCCGGCACTGGTGGCCCACTAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGCTGGATCGCTCCAGTaGTCTTTTATCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEAGSLQ*SFIQAG
Trigger: GCCTGCCTGGATAAAAGACCACTGGAGCGATCCAGC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGCAGCATGGTGTCCTaGAGCTCCTCATCACACTCC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESSMVS*SSSSHS
Trigger: GGAGTGTGATGAGGAGCTCCAGGACACCATGCTGCT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAGGATCATCCTCATGTaGGCGTCGGGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELRIILM*ASGPIC
Trigger: ACAGATGGGCCCCGACGCCCACATGAGGATGATCCT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTCATCCACAGTCCTCTaGCCAGGTGGTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSSTVL*PGGLRR
Trigger: CCTTCGCAAACCACCTGGCCAGAGGACTGTGGATGA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGCTCTGTTCCCTGCTaGGACCTTCTCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSSVPC*DLLQHQ
Trigger: TTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCCACTGGCACCCGAATaGTTGTGTAGGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEPLAPE*LCRCGP
Trigger: TGGACCACACCTACACAACCATTCGGGTGCCAGTGG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGHRSGH*HPNGCV
Trigger: TACACAACCATTCGGGTGCCAGTGGCCACTTCGGTG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEHRSGH*HPNGCV
Trigger: TACACAACCATTCGGGTGCCAGTGGCCACTTCGGTG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTTCCTTCACCGAAGTaGCCACTGGCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLPSPK*PLAPEW
Trigger: CCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCTTCCTTCACCGAAGTaGCCACTGGCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLPSPK*PLAPEW
Trigger: CCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGTCACAGCATCCTGGTaGCTGCTGGTCTCAGATACT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEVTASW*LLVSDT
Trigger: AGTATCTGAGACCAGCAGTCACCAGGATGCTGTGAC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGTTCGTGTCTACTACTaGGTGGCTCTCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEVRVYY*VALSPQ
Trigger: CTGTGGACTGAGAGCCACTCAGTAGTAGACACGAAC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGAAGAATGGGCAGCGTaGGCAGCGACCATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFEEWAA*AATMLS
Trigger: GCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACCTGGTAACGATGGTTaGATGGCGGGGTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQPGNDG*MAGCVV
Trigger: GACAACACACCCCGCCATGCAACCATCGTTACCAGG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGTCCTTCTGCTCGATaGGGAGCAGTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESPSAR*GAVHCS
Trigger: AGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGALKSF*SMRSSS
Trigger: TGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTTGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQTGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELTGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCTCCTTCATGCAGGGTaGAGACCACACCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLLHAG*RPHPCR
Trigger: ACGGCAAGGGTGTGGTCTGCACCCTGCATGAAGGAG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTCCTTCATGCAGGGTaGAGACCACACCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLLHAG*RPHPCR
Trigger: ACGGCAAGGGTGTGGTCTGCACCCTGCATGAAGGAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGAAGCTCTGTTCCCTaGTGGGACCTTCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCRSSVP*WDLLQH
Trigger: GTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAGAAGCTCTGTTCCCTaGTGGGACCTTCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTRSSVP*WDLLQH
Trigger: GTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTAGTGGGCCACCAGTaGCGGGCAAAGCTGGGTATT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVVGHQ*RAKLGI
Trigger: AATACCCAGCTTTGCCCGGCACTGGTGGCCCACTAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTAGTGGGCCACCAGTaGCGGGCAAAGCTGGGTATT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVVGHQ*RAKLGI
Trigger: AATACCCAGCTTTGCCCGGCACTGGTGGCCCACTAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGTAGTGGGCCACCAGTaGCGGGCAAAGCTGGGTATT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFVVGHQ*RAKLGI
Trigger: AATACCCAGCTTTGCCCGGCACTGGTGGCCCACTAC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESNSGS*SLRAAI
Trigger: GATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCCGGGAGTGAACACATaGTGTCTGCTGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGPGVNT*CLLHHP
Trigger: TGGATGATGCAGCAGACACCATGTGTTCACTCCCGG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCCGGGAGTGAACACATaGTGTCTGCTGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEPGVNT*CLLHHP
Trigger: TGGATGATGCAGCAGACACCATGTGTTCACTCCCGG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAGCAGCATGGTGTCCTaGAGCTCCTCATCACACTCC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSSMVS*SSSSHS
Trigger: GGAGTGTGATGAGGAGCTCCAGGACACCATGCTGCT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAGCAGCATGGTGTCCTaGAGCTCCTCATCACACTCC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSSMVS*SSSSHS
Trigger: GGAGTGTGATGAGGAGCTCCAGGACACCATGCTGCT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGGATCATCCTCATGTaGGCGTCGGGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRIILM*ASGPIC
Trigger: ACAGATGGGCCCCGACGCCCACATGAGGATGATCCT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGTCCTCTGGCCAGGTaGTTTGCGAAGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSPLAR*FAKDHP
Trigger: AGGATGATCCTTCGCAAACCACCTGGCCAGAGGACT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGTCCTCTGGCCAGGTaGTTTGCGAAGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESPLAR*FAKDHP
Trigger: AGGATGATCCTTCGCAAACCACCTGGCCAGAGGACT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCATCCACAGTCCTCTaGCCAGGTGGTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSSTVL*PGGLRR
Trigger: CCTTCGCAAACCACCTGGCCAGAGGACTGTGGATGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCATCCACAGTCCTCTaGCCAGGTGGTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSSTVL*PGGLRR
Trigger: CCTTCGCAAACCACCTGGCCAGAGGACTGTGGATGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGCTCTGTTCCCTGCTaGGACCTTCTCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSSVPC*DLLQHQ
Trigger: TTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAGCTCTGTTCCCTGCTaGGACCTTCTCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSSVPC*DLLQHQ
Trigger: TTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGGAGGTCTCCATACATaGCAGCCCACTGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEGGLHT*QPTVEP
Trigger: TGGTTCTACAGTGGGCTGCCATGTATGGAGACCTCC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACCACTGGCACCCGAATaGTTGTGTAGGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELPLAPE*LCRCGP
Trigger: TGGACCACACCTACACAACCATTCGGGTGCCAGTGG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCHRSGH*HPNGCV
Trigger: TACACAACCATTCGGGTGCCAGTGGCCACTTCGGTG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCTTCCTTCACCGAAGTaGCCACTGGCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLPSPK*PLAPEW
Trigger: CCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTTCCTTCACCGAAGTaGCCACTGGCACCCGAATGG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLPSPK*PLAPEW
Trigger: CCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTCACAGCATCCTGGTaGCTGCTGGTCTCAGATACT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVTASW*LLVSDT
Trigger: AGTATCTGAGACCAGCAGTCACCAGGATGCTGTGAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTCCCATAGTGCCTTaGAGTCCTTCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSPIVP*SPSARC
Trigger: GCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCTCCCATAGTGCCTTaGAGTCCTTCTGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSPIVP*SPSARC
Trigger: GCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGGACGAAGAGGAACGTaGGGTTCAATGAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELGRRGT*GSMRGV
Trigger: CACACCTCTCATTGAACCTCACGTTCCTCTTCGTCC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGGACGAAGAGGAACGTaGGGTTCAATGAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQGRRGT*GSMRGV
Trigger: CACACCTCTCATTGAACCTCACGTTCCTCTTCGTCC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCCTGGTCCACGTGGTTaGGAACACCATCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGPGPRG*EHHLLT
Trigger: TGTTAGAAGATGGTGTTCTCAACCACGTGGACCAGG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCCCTTAGGATCCGGTTaGAATCCTCCTTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGPLGSG*NPPCLL
Trigger: GAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCCTGGTAACGATGGTTaGATGGCGGGGTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNPGNDG*MAGCVV
Trigger: GACAACACACCCCGCCATGCAACCATCGTTACCAGG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCALKSF*SMRSSS
Trigger: TGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNTGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAACAGGACTTGCCACATaGCAACAGCTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMATGLAT*QQLESG
Trigger: CCCGGACTCAAGCTGTTGGCATGTGGCAAGTCCTGT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCTCCTTCATGCAGGGTaGAGACCACACCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLLLHAG*RPHPCR
Trigger: ACGGCAAGGGTGTGGTCTGCACCCTGCATGAAGGAG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGAAGCTCTGTTCCCTaGTGGGACCTTCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRSSVP*WDLLQH
Trigger: GTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSNSGS*SLRAAI
Trigger: GATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSNSGS*SLRAAI
Trigger: GATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGQLVGN*TDDFLH
Trigger: GTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEQLVGN*TDDFLH
Trigger: GTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGCTGGATCGCTCCAGTaGTCTTTTATCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFAGSLQ*SFIQAG
Trigger: GCCTGCCTGGATAAAAGACCACTGGAGCGATCCAGC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGTGTGTTGTCCAGAATaGACTCTCCAAAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQVCCPE*TLQRPS
Trigger: GGACGGCCTTTGGAGAGTCCATTCTGGACAACACAC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTAACGATGGTTGCATaGCGGGGTGTGTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVTMVA*RGVLSR
Trigger: TCTGGACAACACACCCCGCCATGCAACCATCGTTAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCCGGGAGTGAACACATaGTGTCTGCTGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCPGVNT*CLLHHP
Trigger: TGGATGATGCAGCAGACACCATGTGTTCACTCCCGG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACCGGGAGTGAACACATaGTGTCTGCTGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQPGVNT*CLLHHP
Trigger: TGGATGATGCAGCAGACACCATGTGTTCACTCCCGG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGCTCCTGGTCCACGTaGTTGAGAACACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLECSWST*LRTPSS
Trigger: AGAAGATGGTGTTCTCAACCACGTGGACCAGGAGCA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGCAGCATGGTGTCCTaGAGCTCCTCATCACACTCC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASSMVS*SSSSHS
Trigger: GGAGTGTGATGAGGAGCTCCAGGACACCATGCTGCT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGGATCATCCTCATGTaGGCGTCGGGGCCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLRIILM*ASGPIC
Trigger: ACAGATGGGCCCCGACGCCCACATGAGGATGATCCT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGTCCTCTGGCCAGGTaGTTTGCGAAGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSPLAR*FAKDHP
Trigger: AGGATGATCCTTCGCAAACCACCTGGCCAGAGGACT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAGTCCTCTGGCCAGGTaGTTTGCGAAGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSPLAR*FAKDHP
Trigger: AGGATGATCCTTCGCAAACCACCTGGCCAGAGGACT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCATCCACAGTCCTCTaGCCAGGTGGTTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSSTVL*PGGLRR
Trigger: CCTTCGCAAACCACCTGGCCAGAGGACTGTGGATGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAGCTCTGTTCCCTGCTaGGACCTTCTCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSSVPC*DLLQHQ
Trigger: TTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLIGWRF*ALSSPV
Trigger: TACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTAT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCCACTGGCACCCGAATaGTTGTGTAGGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFPLAPE*LCRCGP
Trigger: TGGACCACACCTACACAACCATTCGGGTGCCAGTGG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACCACTGGCACCCGAATaGTTGTGTAGGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAPLAPE*LCRCGP
Trigger: TGGACCACACCTACACAACCATTCGGGTGCCAGTGG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAHRSGH*HPNGCV
Trigger: TACACAACCATTCGGGTGCCAGTGGCCACTTCGGTG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFHRSGH*HPNGCV
Trigger: TACACAACCATTCGGGTGCCAGTGGCCACTTCGGTG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGAACGTGAGGTTCAATaGGAGGTGTGTTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEEREVQ*EVCSPC
Trigger: ACAAGGAGAACACACCTCTCATTGAACCTCACGTTC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCCTGGTCCACGTGGTTaGGAACACCATCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTPGPRG*EHHLLT
Trigger: TGTTAGAAGATGGTGTTCTCAACCACGTGGACCAGG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGVPPLA*DSKMRT
Trigger: TGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGAC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACCCTTAGGATCCGGTTaGAATCCTCCTTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQPLGSG*NPPCLL
Trigger: GAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGGCTGTGAGTTTCCTTaGTTAGAAGCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEGCEFP*LEALFP
Trigger: AGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGGCTGTGAGTTTCCTTaGTTAGAAGCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGGCEFP*LEALFP
Trigger: AGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTGTTCTGTACCTTGTaGAGGCTGTGCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLFCTL*RLCVVV
Trigger: CACTACCACGCACAGCCTTCACAAGGTACAGAACAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACACGCTTGCTGAGCTaGGAACAAAGGCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTRLLS*EQRQIS
Trigger: TGAGATCTGCCTTTGTTCTCAGCTCAGCAAGCGTGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGTCCTTCTGCTCGATaGGGAGCAGTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASPSAR*GAVHCS
Trigger: AGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGACACATGGTGTCTGCTaGATCATCCAGTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTTHGVC*IIQSTS
Trigger: ACTGGTGGACTGGATGATGCAGCAGACACCATGTGT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACACATGGTGTCTGCTaGATCATCCAGTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTHGVC*IIQSTS
Trigger: ACTGGTGGACTGGATGATGCAGCAGACACCATGTGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATTGTCTTGGAAATGGTaGTCCTGGTCCACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELLSWKW*SWSTWL
Trigger: CAACCACGTGGACCAGGAGCACCATTTCCAAGACAA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTTGTCTTGGAAATGGTaGTCCTGGTCCACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLSWKW*SWSTWL
Trigger: CAACCACGTGGACCAGGAGCACCATTTCCAAGACAA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATTGTCTTGGAAATGGTaGTCCTGGTCCACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLSWKW*SWSTWL
Trigger: CAACCACGTGGACCAGGAGCACCATTTCCAAGACAA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAAAGGGGCATCCTCGTaGTCATCATCCAGAAATCGA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEKGASS*SSSRNR
Trigger: TCGATTTCTGGATGATGAGCACGAGGATGCCCCTTT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTGGCCAGGTGGTTTaGGAAGGATCATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSGQVV*EGSSSC
Trigger: ACATGAGGATGATCCTTCGCAAACCACCTGGCCAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCTGGCCAGGTGGTTTaGGAAGGATCATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSGQVV*EGSSSC
Trigger: ACATGAGGATGATCCTTCGCAAACCACCTGGCCAGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGAAGCTCTGTTCCCTaGTGGGACCTTCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLRSSVP*WDLLQH
Trigger: GTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGACACGTCATCCTCTTaGAGGAGGTCTCCATACATG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTDTSSS*RRSPYM
Trigger: CATGTATGGAGACCTCCTGCAAGAGGATGACGTGTC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSNSGS*SLRAAI
Trigger: GATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCQLVGN*TDDFLH
Trigger: GTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGTGTGTTGTCCAGAATaGACTCTCCAAAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFVCCPE*TLQRPS
Trigger: GGACGGCCTTTGGAGAGTCCATTCTGGACAACACAC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGTAACGATGGTTGCATaGCGGGGTGTGTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFVTMVA*RGVLSR
Trigger: TCTGGACAACACACCCCGCCATGCAACCATCGTTAC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACCGGGAGTGAACACATaGTGTCTGCTGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAPGVNT*CLLHHP
Trigger: TGGATGATGCAGCAGACACCATGTGTTCACTCCCGG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGCTCCTGGTCCACGTaGTTGAGAACACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELCSWST*LRTPSS
Trigger: AGAAGATGGTGTTCTCAACCACGTGGACCAGGAGCA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTATTTGTCTTGGAAATaGTGCTCCTGGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEYLSWK*CSWSTW
Trigger: CCACGTGGACCAGGAGCACCATTTCCAAGACAAATA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGCTCTGTTCCCTGCTaGGACCTTCTCCAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSSVPC*DLLQHQ
Trigger: TTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGGAGGTCTCCATACATaGCAGCCCACTGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFGGLHT*QPTVEP
Trigger: TGGTTCTACAGTGGGCTGCCATGTATGGAGACCTCC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCCACTGGCACCCGAATaGTTGTGTAGGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLPLAPE*LCRCGP
Trigger: TGGACCACACCTACACAACCATTCGGGTGCCAGTGG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTGAGGATCTTCTCTaGAGGGACCTTGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSEDLL*RDLGNG
Trigger: ACCATTACCAAGGTCCCTTCAGAGAAGATCCTCAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCTATCTCTTATCATGTaGGGTGCTCGAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLELSLIM*GARERM
Trigger: CATTCTCTCTCGAGCACCTCACATGATAAGAGATAG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGRETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVPPLA*DSKMRT
Trigger: TGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCCCTTAGGATCCGGTTaGAATCCTCCTTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFPLGSG*NPPCLL
Trigger: GAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACCCTTAGGATCCGGTTaGAATCCTCCTTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAPLGSG*NPPCLL
Trigger: GAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGGCTGTGAGTTTCCTTaGTTAGAAGCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELGCEFP*LEALFP
Trigger: AGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGGCTGTGAGTTTCCTTaGTTAGAAGCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQGCEFP*LEALFP
Trigger: AGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCTCATCGCCCGTATTaGACTGTTGCAAAAGAACCT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESHRPY*TVAKEP
Trigger: AGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTACACGCTTGCTGAGCTaGGAACAAAGGCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFTRLLS*EQRQIS
Trigger: TGAGATCTGCCTTTGTTCTCAGCTCAGCAAGCGTGT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAACACGCTTGCTGAGCTaGGAACAAAGGCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMATRLLS*EQRQIS
Trigger: TGAGATCTGCCTTTGTTCTCAGCTCAGCAAGCGTGT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGCTGAACACGCTTGCTaGGCTGAGAACAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLAEHAC*AENKGR
Trigger: TCTGCCTTTGTTCTCAGCTCAGCAAGCGTGTTCAGC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTCTCCTCTTCTCACTaGTGGGACTACTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNFSSSH*WDYSGN
Trigger: GTTGCCTGAGTAGTCCCATCAGTGAGAAGAGGAGAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCTGAGGATCTTCTCTaGAGGGACGTTCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASEDLL*RDVLLV
Trigger: GACAAGGAGAACGTCCCTTCAGAGAAGATCCTCAGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538974.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAACACATGGTGTCTGCTaGATCATCCAGTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMATHGVC*IIQSTS
Trigger: ACTGGTGGACTGGATGATGCAGCAGACACCATGTGT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTTGTCTTGGAAATGGTaGTCCTGGTCCACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLSWKW*SWSTWL
Trigger: CAACCACGTGGACCAGGAGCACCATTTCCAAGACAA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTGTCTTGGAAATGGTaGTCCTGGTCCACGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLSWKW*SWSTWL
Trigger: CAACCACGTGGACCAGGAGCACCATTTCCAAGACAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAAAGGGGCATCCTCGTaGTCATCATCCAGAAATCGA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTKGASS*SSSRNR
Trigger: TCGATTTCTGGATGATGAGCACGAGGATGCCCCTTT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCTGGCCAGGTGGTTTaGGAAGGATCATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSGQVV*EGSSSC
Trigger: ACATGAGGATGATCCTTCGCAAACCACCTGGCCAGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCTGGCCAGGTGGTTTaGGAAGGATCATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASGQVV*EGSSSC
Trigger: ACATGAGGATGATCCTTCGCAAACCACCTGGCCAGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGACACGTCATCCTCTTaGAGGAGGTCTCCATACATG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMADTSSS*RRSPYM
Trigger: CATGTATGGAGACCTCCTGCAAGAGGATGACGTGTC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGACACGTCATCCTCTTaGAGGAGGTCTCCATACATG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFDTSSS*RRSPYM
Trigger: CATGTATGGAGACCTCCTGCAAGAGGATGACGTGTC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGACACGTCATCCTCTTaGAGGAGGTCTCCATACATG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFDTSSS*RRSPYM
Trigger: CATGTATGGAGACCTCCTGCAAGAGGATGACGTGTC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSNSGS*SLRAAI
Trigger: GATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNQLVGN*TDDFLH
Trigger: GTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGTCAGTGAATCGAATTaGTCTCGCGGGCAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFVSESN*SRGQAN
Trigger: GTTTGCTTGCCCGCGAGAGCAATTCGATTCACTGAC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGTTCTGGCCGTATTTaGAATCATGCGCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFCSGRI*NHALPR
Trigger: ACGTGGGAGCGCATGATTGCAAATACGGCCAGAACA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409036.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATATCCACATCTTCGCTaGATCGCTCCAGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELYPHLR*IAPVVF
Trigger: AAAGACCACTGGAGCGATCCAGCGAAGATGTGGATA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGCTCCTGGTCCACGTaGTTGAGAACACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFCSWST*LRTPSS
Trigger: AGAAGATGGTGTTCTCAACCACGTGGACCAGGAGCA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATGCTCCTGGTCCACGTaGTTGAGAACACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMACSWST*LRTPSS
Trigger: AGAAGATGGTGTTCTCAACCACGTGGACCAGGAGCA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTATTTGTCTTGGAAATaGTGCTCCTGGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTYLSWK*CSWSTW
Trigger: CCACGTGGACCAGGAGCACCATTTCCAAGACAAATA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGTCCTCTGGCCAGGTaGTTTGCGAAGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSPLAR*FAKDHP
Trigger: AGGATGATCCTTCGCAAACCACCTGGCCAGAGGACT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGTGCCGGGCAAAGCTaGGTATTTGGCATAAAAACA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSAGQS*VFGIKT
Trigger: TGTTTTTATGCCAAATACCCAGCTTTGCCCGGCACT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGTGCCGGGCAAAGCTaGGTATTTGGCATAAAAACA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESAGQS*VFGIKT
Trigger: TGTTTTTATGCCAAATACCCAGCTTTGCCCGGCACT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGGAGGTCTCCATACATaGCAGCCCACTGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLGGLHT*QPTVEP
Trigger: TGGTTCTACAGTGGGCTGCCATGTATGGAGACCTCC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACAGGAATGAGACCCTaGTGCAGACATAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTGMRP*CRHKSK
Trigger: CTTGGACTTATGTCTGCACCAGGGTCTCATTCCTGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGTGTCTACTACTGAGTaGCTCTCAGTCCACAGAAAG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQVSTTE*LSVHRK
Trigger: CTTTCTGTGGACTGAGAGCCACTCAGTAGTAGACAC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCTGAGGATCTTCTCTaGAGGGACCTTGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSEDLL*RDLGNG
Trigger: ACCATTACCAAGGTCCCTTCAGAGAAGATCCTCAGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCTGAGGATCTTCTCTaGAGGGACCTTGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSEDLL*RDLGNG
Trigger: ACCATTACCAAGGTCCCTTCAGAGAAGATCCTCAGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTATCTCTTATCATGTaGGGTGCTCGAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLSLIM*GARERM
Trigger: CATTCTCTCTCGAGCACCTCACATGATAAGAGATAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCCTGGTCCACGTGGTTaGGAACACCATCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLPGPRG*EHHLLT
Trigger: TGTTAGAAGATGGTGTTCTCAACCACGTGGACCAGG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQRETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCRETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVPPLA*DSKMRT
Trigger: TGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVPPLA*DSKMRT
Trigger: TGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCCCTTAGGATCCGGTTaGAATCCTCCTTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLPLGSG*NPPCLL
Trigger: GAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGGCTGTGAGTTTCCTTaGTTAGAAGCTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNGCEFP*LEALFP
Trigger: AGGGAACAGAGCTTCTAATCAAGGAAACTCACAGCC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTTTTGCTGAGGCTGTaGGTTTCCTTGATTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLLLRL*VSLIRS
Trigger: GCTTCTAATCAAGGAAACTCACAGCCTCAGCAAAAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACTTTTGCTGAGGCTGTaGGTTTCCTTGATTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELLLLRL*VSLIRS
Trigger: GCTTCTAATCAAGGAAACTCACAGCCTCAGCAAAAG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTCGCCTCTTATTGTTaGGGGCATAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLASYC*GHNPFS
Trigger: AGAAAATGGATTATGCCCTCAACAATAAGAGGCGAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTCATCGCCCGTATTaGACTGTTGCAAAAGAACCT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSHRPY*TVAKEP
Trigger: AGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGCTCATGCACGCAGTTaGAGAGTTCCCAATCATAAA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTAHARS*RVPNHK
Trigger: TTTATGATTGGGAACTCTTCAACTGCGTGCATGAGC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTACACGCTTGCTGAGCTaGGAACAAAGGCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLTRLLS*EQRQIS
Trigger: TGAGATCTGCCTTTGTTCTCAGCTCAGCAAGCGTGT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTGGTTCTTATTAGCTTaGGCTGCATCAGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGWFLLA*AASGLK
Trigger: CTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTGAAGACACAGGAATaGGACCCTGGTGCAGACATA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLKTQE*DPGADI
Trigger: TATGTCTGCACCAGGGTCTCATTCCTGTGTCTTCAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTTCTCCTCTTCTCACTaGTGGGACTACTCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLFSSSH*WDYSGN
Trigger: GTTGCCTGAGTAGTCCCATCAGTGAGAAGAGGAGAA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTCTGAGGATCTTCTCTaGAGGGACCACTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSEDLL*RDHFRS
Trigger: GCTTCTGAAGTGGTCCCTTCAGAGAAGATCCTCAGA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535187.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGGAGCCAGAAGTCCTaGCATATACTGTCGATATTT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLERSQKS*HILSIF
Trigger: AAATATCGACAGTATATGGCAGGACTTCTGGCTCCT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAAAGGGGCATCCTCGTaGTCATCATCCAGAAATCGA +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFKGASS*SSSRNR
Trigger: TCGATTTCTGGATGATGAGCACGAGGATGCCCCTTT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAAAGGGGCATCCTCGTaGTCATCATCCAGAAATCGA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNKGASS*SSSRNR
Trigger: TCGATTTCTGGATGATGAGCACGAGGATGCCCCTTT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGACACGTCATCCTCTTaGAGGAGGTCTCCATACATG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLDTSSS*RRSPYM
Trigger: CATGTATGGAGACCTCCTGCAAGAGGATGACGTGTC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLQLVGN*TDDFLH
Trigger: GTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAATTAGCTCCAGCTCATaGACGCAGTTGAAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAISSSS*TQLKSS
Trigger: GGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAAT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTATCCACATCTTCGCTaGATCGCTCCAGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFYPHLR*IAPVVF
Trigger: AAAGACCACTGGAGCGATCCAGCGAAGATGTGGATA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTGCTCCTGGTCCACGTaGTTGAGAACACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLCSWST*LRTPSS
Trigger: AGAAGATGGTGTTCTCAACCACGTGGACCAGGAGCA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTGGAAATGGTGCTCCTaGTCCACGTGGTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLWKWCS*STWLRT
Trigger: TGTTCTCAACCACGTGGACCAGGAGCACCATTTCCA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTATTTGTCTTGGAAATaGTGCTCCTGGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFYLSWK*CSWSTW
Trigger: CCACGTGGACCAGGAGCACCATTTCCAAGACAAATA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTATTTGTCTTGGAAATaGTGCTCCTGGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFYLSWK*CSWSTW
Trigger: CCACGTGGACCAGGAGCACCATTTCCAAGACAAATA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTACCTTCTTCCCCCTaGTTAAACAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVPSSP*LNNTVP
Trigger: AGGGACTGTGTTGTTTAACCAGGGGGAAGAAGGTAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAGTGCCGGGCAAAGCTaGGTATTTGGCATAAAAACA +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSAGQS*VFGIKT
Trigger: TGTTTTTATGCCAAATACCCAGCTTTGCCCGGCACT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGTATCTCACTGTTCTaGCCGTATTTGCAATCATGC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSISLF*PYLQSC
Trigger: GCATGATTGCAAATACGGCCAGAACAGTGAGATACT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCATTTTGCCACTCCATaGAAAAGCTTGAAGACACAG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEHFATP*KSLKTQ
Trigger: CTGTGTCTTCAAGCTTTTCCATGGAGTGGCAAAATG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTCTGAGGATCTTCTCTaGAGGGACCTTGGTAATGGT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSEDLL*RDLGNG
Trigger: ACCATTACCAAGGTCCCTTCAGAGAAGATCCTCAGA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCTATCTCTTATCATGTaGGGTGCTCGAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLSLIM*GARERM
Trigger: CATTCTCTCTCGAGCACCTCACATGATAAGAGATAG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTATCTCTTATCATGTaGGGTGCTCGAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALSLIM*GARERM
Trigger: CATTCTCTCTCGAGCACCTCACATGATAAGAGATAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFRETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMARETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCGTGAGACTCAAAAATaGGAACACCTGCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNRETQK*EHLLTL
Trigger: GAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLVPPLA*DSKMRT
Trigger: TGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGAC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTTTTGCTGAGGCTGTaGGTTTCCTTGATTAGAAGC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALLLRL*VSLIRS
Trigger: GCTTCTAATCAAGGAAACTCACAGCCTCAGCAAAAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTTTTGCTGAGGCTGTaGGTTTCCTTGATTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLLLRL*VSLIRS
Trigger: GCTTCTAATCAAGGAAACTCACAGCCTCAGCAAAAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCTCGCCTCTTATTGTTaGGGGCATAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLASYC*GHNPFS
Trigger: AGAAAATGGATTATGCCCTCAACAATAAGAGGCGAG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTCGCCTCTTATTGTTaGGGGCATAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLASYC*GHNPFS
Trigger: AGAAAATGGATTATGCCCTCAACAATAAGAGGCGAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGCCTTTGCATCTTCTaGGATTTGCTTGACAATCTT +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLECLCIF*DLLDNL
Trigger: AAGATTGTCAAGCAAATCTCAGAAGATGCAAAGGCA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCTCATCGCCCGTATTaGACTGTTGCAAAAGAACCT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSHRPY*TVAKEP
Trigger: AGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCTCATCGCCCGTATTaGACTGTTGCAAAAGAACCT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSHRPY*TVAKEP
Trigger: AGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGCTCATGCACGCAGTTaGAGAGTTCCCAATCATAAA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNAHARS*RVPNHK
Trigger: TTTATGATTGGGAACTCTTCAACTGCGTGCATGAGC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGTGACGACCCAAAACTaGATTTCATTAAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGVTTQN*ISLNLL
Trigger: GAGGAGATTTAATGAAATTCAGTTTTGGGTCGTCAC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTTACTAGATTGTCAATaGACGTCTTGTTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLLDCQ*TSCSPH
Trigger: ATGAGGGGAACAAGACGTTCATTGACAATCTAGTAA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGTTCTTATTAGCTTaGGCTGCATCAGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTWFLLA*AASGLK
Trigger: CTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTGGCACAAGTGGAAATaGAACAGGGTAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLWHKWK*NRVATN
Trigger: GTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGGAGCCAGAAGTCCTaGCATATACTGTCGATATTT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCRSQKS*HILSIF
Trigger: AAATATCGACAGTATATGGCAGGACTTCTGGCTCCT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCTTATCATGTGAGGTaGTCGAGAGAGAATGGCATT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSYHVR*SRENGI
Trigger: AATGCCATTCTCTCTCGAGCACCTCACATGATAAGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAAAGGGGCATCCTCGTaGTCATCATCCAGAAATCGA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLKGASS*SSSRNR
Trigger: TCGATTTCTGGATGATGAGCACGAGGATGCCCCTTT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCACTAGTGCTAACTTaGCGAAGTCATCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSLVLT*RSHLLH
Trigger: ATGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCACTAGTGCTAACTTaGCGAAGTCATCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSLVLT*RSHLLH
Trigger: ATGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGCATCTTCTGAGATTTaGTTGACAATCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEASSEI*LTIFSN
Trigger: GTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCTTATTAGCTTGAGCTaGATCAGGATTGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLISLS*IRIEGL
Trigger: CAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTTATTAGCTTGAGCTaGATCAGGATTGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLISLS*IRIEGL
Trigger: CAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTTATTAGCTTGAGCTaGATCAGGATTGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLISLS*IRIEGL
Trigger: CAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTATTTGTCTTGGAAATaGTGCTCCTGGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLYLSWK*CSWSTW
Trigger: CCACGTGGACCAGGAGCACCATTTCCAAGACAAATA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAGTGCCGGGCAAAGCTaGGTATTTGGCATAAAAACA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSAGQS*VFGIKT
Trigger: TGTTTTTATGCCAAATACCCAGCTTTGCCCGGCACT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAGTATCTCACTGTTCTaGCCGTATTTGCAATCATGC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSISLF*PYLQSC
Trigger: GCATGATTGCAAATACGGCCAGAACAGTGAGATACT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTACTACTCAGGCAACATaGTCAAGTTGCAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCTTQAT*SSCNQL
Trigger: AAGCTGATTGCAACTTGACCATGTTGCCTGAGTAGT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCACCCTTGCCGTAAATaGCTACATTCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLHPCRK*LHSLIL
Trigger: AAGGATCAGTGAATGTAGTCATTTACGGCAAGGGTG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCTCGCCTCTTATTGTTaGGGGCATAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLASYC*GHNPFS
Trigger: AGAAAATGGATTATGCCCTCAACAATAAGAGGCGAG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTCGCCTCTTATTGTTaGGGGCATAATCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALASYC*GHNPFS
Trigger: AGAAAATGGATTATGCCCTCAACAATAAGAGGCGAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATGCCTTTGCATCTTCTaGGATTTGCTTGACAATCTT +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQCLCIF*DLLDNL
Trigger: AAGATTGTCAAGCAAATCTCAGAAGATGCAAAGGCA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGCCTTTGCATCTTCTaGGATTTGCTTGACAATCTT +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELCLCIF*DLLDNL
Trigger: AAGATTGTCAAGCAAATCTCAGAAGATGCAAAGGCA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGCCTTTGCATCTTCTaGGATTTGCTTGACAATCTT +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTCLCIF*DLLDNL
Trigger: AAGATTGTCAAGCAAATCTCAGAAGATGCAAAGGCA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGCTCATGCACGCAGTTaGAGAGTTCCCAATCATAAA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLAHARS*RVPNHK
Trigger: TTTATGATTGGGAACTCTTCAACTGCGTGCATGAGC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTGACGACCCAAAACTaGATTTCATTAAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVTTQN*ISLNLL
Trigger: GAGGAGATTTAATGAAATTCAGTTTTGGGTCGTCAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGTGACGACCCAAAACTaGATTTCATTAAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELVTTQN*ISLNLL
Trigger: GAGGAGATTTAATGAAATTCAGTTTTGGGTCGTCAC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGTGACGACCCAAAACTaGATTTCATTAAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTVTTQN*ISLNLL
Trigger: GAGGAGATTTAATGAAATTCAGTTTTGGGTCGTCAC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAAAGGCAGATCTCAGTaGCGACCCAAAACTGAATTT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNKGRSQ*RPKTEF
Trigger: AAATTCAGTTTTGGGTCGTCACTGAGATCTGCCTTT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTA +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEVLFPS*VNVISL
Trigger: TAAAGATATGACATTTACTCATGAGGGGAACAAGAC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGGTTCTTATTAGCTTaGGCTGCATCAGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFWFLLA*AASGLK
Trigger: CTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATGGTTCTTATTAGCTTaGGCTGCATCAGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAWFLLA*AASGLK
Trigger: CTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTGGTTCTTATTAGCTTaGGCTGCATCAGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNWFLLA*AASGLK
Trigger: CTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTTCCTTTCTGGATTTaGATCATTTTGCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLPFWI*IILPLH
Trigger: ATGGAGTGGCAAAATGATTCAAATCCAGAAAGGAAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGGAGCCAGAAGTCCTaGCATATACTGTCGATATTT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMARSQKS*HILSIF
Trigger: AAATATCGACAGTATATGGCAGGACTTCTGGCTCCT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGGAGCCAGAAGTCCTaGCATATACTGTCGATATTT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRSQKS*HILSIF
Trigger: AAATATCGACAGTATATGGCAGGACTTCTGGCTCCT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAGGAGCCAGAAGTCCTaGCATATACTGTCGATATTT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNRSQKS*HILSIF
Trigger: AAATATCGACAGTATATGGCAGGACTTCTGGCTCCT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCTTATCATGTGAGGTaGTCGAGAGAGAATGGCATT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASYHVR*SRENGI
Trigger: AATGCCATTCTCTCTCGAGCACCTCACATGATAAGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCTTATCATGTGAGGTaGTCGAGAGAGAATGGCATT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSYHVR*SRENGI
Trigger: AATGCCATTCTCTCTCGAGCACCTCACATGATAAGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCACTAGTGCTAACTTaGCGAAGTCATCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSLVLT*RSHLLH
Trigger: ATGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCACTAGTGCTAACTTaGCGAAGTCATCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSLVLT*RSHLLH
Trigger: ATGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGCATCTTCTGAGATTTaGTTGACAATCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELASSEI*LTIFSN
Trigger: GTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCTTATTAGCTTGAGCTaGATCAGGATTGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLISLS*IRIEGL
Trigger: CAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTTATTAGCTTGAGCTaGATCAGGATTGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLISLS*IRIEGL
Trigger: CAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAAAATGTACCTTCATTaGCGTTCATTCCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCKMYLH*RSFPVR
Trigger: ACGAACAGGGAATGAACGGCAATGAAGGTACATTTT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCAGCAACGACAGTCTaGCCCATAAAATGCATAACT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASATTV*PIKCIT
Trigger: AGTTATGCATTTTATGGGGCAGACTGTCGTTGCTGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535187.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAATAAATATTTGTCTTaGAAATGGTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLENKYLS*KWCSWS
Trigger: GGACCAGGAGCACCATTTCCAAGACAAATATTTATT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGTGCCGGGCAAAGCTaGGTATTTGGCATAAAAACA +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSAGQS*VFGIKT
Trigger: TGTTTTTATGCCAAATACCCAGCTTTGCCCGGCACT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGTATCTCACTGTTCTaGCCGTATTTGCAATCATGC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSISLF*PYLQSC
Trigger: GCATGATTGCAAATACGGCCAGAACAGTGAGATACT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGTATCTCACTGTTCTaGCCGTATTTGCAATCATGC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASISLF*PYLQSC
Trigger: GCATGATTGCAAATACGGCCAGAACAGTGAGATACT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCACCAAACTCTTCACGTaGGCCTTATTCAACACTTCA +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFTKLFT*ALFNTS
Trigger: TGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGT...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTTTTTCAGGTGTTCCTaGCATCACAGTATACTTTTG +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTFFRCS*HHSILL
Trigger: CAAAAGTATACTGTGATGTCAGGAACACCTGAAAAA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATTTTTCAGGTGTTCCTaGCATCACAGTATACTTTTG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELFFRCS*HHSILL
Trigger: CAAAAGTATACTGTGATGTCAGGAACACCTGAAAAA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTTTTTCAGGTGTTCCTaGCATCACAGTATACTTTTG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCFFRCS*HHSILL
Trigger: CAAAAGTATACTGTGATGTCAGGAACACCTGAAAAA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCATCCGGGCATCATCTaGTACAGATACATAAAACTC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLHPGII*YRYIKL
Trigger: GAGTTTTATGTATCTGTATCAGATGATGCCCGGATG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTGACGACCCAAAACTaGATTTCATTAAATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVTTQN*ISLNLL
Trigger: GAGGAGATTTAATGAAATTCAGTTTTGGGTCGTCAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTA +
Preference number: 4 (lower is better)
Translates to: CQGLASSLDKAISTKLFTVLFPS*VNVISL
Trigger: TAAAGATATGACATTTACTCATGAGGGGAACAAGAC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTA +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCVLFPS*VNVISL
Trigger: TAAAGATATGACATTTACTCATGAGGGGAACAAGAC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTA +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQVLFPS*VNVISL
Trigger: TAAAGATATGACATTTACTCATGAGGGGAACAAGAC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTTACTAGATTGTCAATaGACGTCTTGTTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLLDCQ*TSCSPH
Trigger: ATGAGGGGAACAAGACGTTCATTGACAATCTAGTAA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATTACTAGATTGTCAATaGACGTCTTGTTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMALLDCQ*TSCSPH
Trigger: ATGAGGGGAACAAGACGTTCATTGACAATCTAGTAA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTACTAGATTGTCAATaGACGTCTTGTTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLLDCQ*TSCSPH
Trigger: ATGAGGGGAACAAGACGTTCATTGACAATCTAGTAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTCTTATCATGTGAGGTaGTCGAGAGAGAATGGCATT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSYHVR*SRENGI
Trigger: AATGCCATTCTCTCTCGAGCACCTCACATGATAAGA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGCATCTTCTGAGATTTaGTTGACAATCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNASSEI*LTIFSN
Trigger: GTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGCATCTTCTGAGATTTaGTTGACAATCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFASSEI*LTIFSN
Trigger: GTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTTCCAATATCACCCTaGCGAAATAATGTTATTCCC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVPISP*RNNVIP
Trigger: GGGAATAACATTATTTCGCCAGGGTGATATTGGAAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGTTCCAATATCACCCTaGCGAAATAATGTTATTCCC +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFVPISP*RNNVIP
Trigger: GGGAATAACATTATTTCGCCAGGGTGATATTGGAAC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAAATAAATATTTGTCTTaGAAATGGTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQNKYLS*KWCSWS
Trigger: GGACCAGGAGCACCATTTCCAAGACAAATATTTATT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMASTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAAGCAGGCTTCCGCTTaGTTTAAAAGAATCAGAACT +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFKQASA*FKRIRT
Trigger: AGTTCTGATTCTTTTAAACCAAGCGGAAGCCTGCTT...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR CCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTGATGTATGAGAGCTaGACTGATTTATCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVMYES*TDLSWL
Trigger: AAGCCAAGATAAATCAGTCCAGCTCTCATACATCAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTACTACTCAGGCAACATaGTCAAGTTGCAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLTTQAT*SSCNQL
Trigger: AAGCTGATTGCAACTTGACCATGTTGCCTGAGTAGT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGAGAGAGAGATGGTATaGCTAGCTTTTGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAEREMV*LAFVRV
Trigger: AACTCTTACAAAAGCTAGCCATACCATCTCTCTCTC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535187.5
CDS-3UTR TCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTTTTTCAGGTGTTCCTaGCATCACAGTATACTTTTG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFFFRCS*HHSILL
Trigger: CAAAAGTATACTGTGATGTCAGGAACACCTGAAAAA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTGCCTTTGCATCTTCTaGGATTTGCTTGACAATCTT +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLCLCIF*DLLDNL
Trigger: AAGATTGTCAAGCAAATCTCAGAAGATGCAAAGGCA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLERRKY*NIIRFE
Trigger: CTCAAACCTAATGATGTTTCAGTATTTACGACGCTC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR TCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTA +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAVLFPS*VNVISL
Trigger: TAAAGATATGACATTTACTCATGAGGGGAACAAGAC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGCATCTTCTGAGATTTaGTTGACAATCTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLASSEI*LTIFSN
Trigger: GTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR GCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGGATTTGAATCATTTTaGCACTCCATGGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMAGFESF*HSMEKL
Trigger: AAGCTTTTCCATGGAGTGGCAAAATGATTCAAATCC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR GCA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGTCTGCCCCATAAAATaGATAACTCACAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNVCPIK*ITHKYK
Trigger: TTTGTACTTGTGAGTTATGCATTTTATGGGGCAGAC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535187.5
CDS-3UTR CCA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAATAAATATTTGTCTTaGAAATGGTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: STKLFTWALFNTSAKKMANKYLS*KWCSWS
Trigger: GGACCAGGAGCACCATTTCCAAGACAAATATTTATT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAATAAATATTTGTCTTaGAAATGGTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFNKYLS*KWCSWS
Trigger: GGACCAGGAGCACCATTTCCAAGACAAATATTTATT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTACTCTTAAGAAATaGCAGTTATCTTCTCGTAAG +
Preference number: 4 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSTLKK*QLSSRK
Trigger: CTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSTKTS*SCSLSL
Trigger: CAGACTTAAAGAACATGACCAAGATGTCTTGGTGCT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAATAAATATTTGTCTTaGAAATGGTGCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLNKYLS*KWCSWS
Trigger: GGACCAGGAGCACCATTTCCAAGACAAATATTTATT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCTACTCTTAAGAAATaGCAGTTATCTTCTCGTAAG +
Preference number: 4 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSTLKK*QLSSRK
Trigger: CTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCTACTCTTAAGAAATaGCAGTTATCTTCTCGTAAG +
Preference number: 4 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSTLKK*QLSSRK
Trigger: CTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGGTATGCTAAATCTTTaGAGCTCATCAGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLGMLNL*SSSVQK
Trigger: CTTTTGAACTGATGAGCTCCAAAGATTTAGCATACC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CCA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLIFERL*TGDKLL
Trigger: CAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAAT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp GCAGCGTGCGCAGCGACCATGTTGAGCGGCGGCGCGCGGTGTCCCTaGCTGCGGCGACCTCCCGCGCTCGCTCTGCCTGCGCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: AACAATMLSGGARCP*LRRPPALALPAPPP
Trigger: GGGCGGAGGCGCAGGCAGAGCGAGCGCGGGAGGTCGCCGCAGCCAGGGACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS TCA 90 bp ACTCGGCAGAGGAGGAAGAATGGGCAGCGTGCGCAGCGACCATGTTaGGCGGCGGCGCGCGGTGTCCCTGGCTGCGGCGACCTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: TRQRRKNGQRAQRPC*AAARGVPGCGDLPR
Trigger: GCGCGGGAGGTCGCCGCAGCCAGGGACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS GCA 90 bp TCCAGGCAGGCGATCCACTCGGCAGAGGAGGAAGAATGGGCAGCGTaGGCAGCGACCATGTTGAGCGGCGGCGCGCGGTGTCCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRQAIHSAEEEEWAA*AATMLSGGARCPWL
Trigger: CAGCCAGGGACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGTGGATCGCCTGCCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS TCA 90 bp AGGGCGAGGAAGGCTTGGCGTGGGGACGCCCGTCGAGTCTCTCAGTaGGGAATGAGAGGCCAGCTTCTCCTGCGGGGTGAGGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RARKAWRGDARRVSQ*GMRGQLLLRGEEGL
Trigger: CAGCCCTTCCTCACCCCGCAGGAGAAGCTGGCCTCTCATTCCTCACTGAGAGACTCGACGGGCGTCCCCACGCCAAGCCTTCCTCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484331.5
CDS CCA 90 bp GGTCTTTTATCCAGGCAGGCGATCCACTCGGCAGAGGAGGAAGAATaGGCAGCGTGCGCAGCGACCATGTTGAGCGGCGGCGCGCGGTGT +
Preference number: 5 (lower is better)
Translates to: GLLSRQAIHSAEEEE*AACAATMLSGGARC
Trigger: ACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGTGGATCGCCTGCCTGGATAAAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS GCA 90 bp CTTGACTATGATCAGGCCCTCCCCGGAGCCCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCACCGAAGTGGCCACTGGCACCCGAAT +
Preference number: 5 (lower is better)
Translates to: LDYDQALPGAQLVGN*TDDFLHRSGHWHPN
Trigger: ATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGAGGGCCTGATCATAGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 90 bp CAGCTGCAGCACCTCGGCCTCACAGCTCCGTTTACTAGAAACAAATaGAGAGTGTCAGGCAGGAGGGCCAAGTGGCAGCAAAGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: QLQHLGLTAPFTRNK*RVSGRRAKWQQSRE
Trigger: CTCCCGGCTTTGCTGCCACTTGGCCCTCCTGCCTGACACTCTGCATTTGTTTCTAGTAAACGGAGCTGTGAGGCCGAGGTGCTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS GCA 90 bp CTGCTCGATGCGGAGCAGTTCACTGCTCTCCCTGGTAACGATGGTTaGATGGCGGGGTGTGTTGTCCAGAATGGACTCTCCAAAGGCCGT +
Preference number: 5 (lower is better)
Translates to: LLDAEQFTALPGNDG*MAGCVVQNGLSKGR
Trigger: ACGGCCTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS CCA 90 bp TCGATGCGGAGCAGTTCACTGCTCTCCCTGGTAACGATGGTTGCATaGCGGGGTGTGTTGTCCAGAATGGACTCTCCAAAGGCCGTCCCA +
Preference number: 5 (lower is better)
Translates to: SMRSSSLLSLVTMVA*RGVLSRMDSPKAVP
Trigger: TGGGACGGCCTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAGCAGTGAACTGCTCCGCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTGCGCAGCGACCATGTaGAGCGGCGGCGCGCGGTGT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGCAATM*SGGARC
Trigger: ACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS GCA 90 bp AAAGAAGCCTTAGGGCTCACCTCCCATAGTGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCACTGCTCTCCCTGGTAACGATGGTT +
Preference number: 5 (lower is better)
Translates to: KEALGLTSHSALKSF*SMRSSSLLSLVTMV
Trigger: AACCATCGTTACCAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGGTGAGCCCTAAGGCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS GCA 90 bp TGGTGCTCCTGGTCCACTATGGGAAACATGGAAGCACGTGTCAGCTaGAGCACCTCGGCCTCACAGCTCCGTTTACTAGAAACAAATGCA +
Preference number: 5 (lower is better)
Translates to: WCSWSTMGNMEARVS*STSASQLRLLETNA
Trigger: TGCATTTGTTTCTAGTAAACGGAGCTGTGAGGCCGAGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCAGGAGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS CCA 90 bp CTTGTCGGCAACTGCACTGATGACTTCCTTCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTAGGTGTGGTCCATGCAATAGACCTT +
Preference number: 5 (lower is better)
Translates to: LVGNCTDDFLHRSGH*HPNGCVGVVHAIDL
Trigger: AAGGTCTATTGCATGGACCACACCTACACAACCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAGTCATCAGTGCAGTTGCCGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSPEPS*SATALM
Trigger: CATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSPEPS*SATALM
Trigger: CATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSPEPS*SATALM
Trigger: CATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp AATATTTGTCTTGGAAATGGTGCTCCTGGTCCACTATGGGAAACATaGAAGCACGTGTCAGCTGCAGCACCTCGGCCTCACAGCTCCGTT +
Preference number: 5 (lower is better)
Translates to: NICLGNGAPGPLWET*KHVSAAAPRPHSSV
Trigger: AACGGAGCTGTGAGGCCGAGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCAGGAGCACCATTTCCAAGACAAATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGG +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSGSCS*RAAIIR
Trigger: CCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGG +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESGSCS*RAAIIR
Trigger: CCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSPEPS*SATALM
Trigger: CATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMASPEPS*SATALM
Trigger: CATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp ACCTTAAACAGAACTTCATCAGAGCCGCGGATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTATTGAACTGTTGCAAAAGAACCTTG +
Preference number: 5 (lower is better)
Translates to: TLNRTSSEPRIGWRF*ALSSPVLNCCKRTL
Trigger: CAAGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTCTGATGAAGTTCTGTTTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGCATGGCGGGGTGTGTaGTCCAGAATGGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTAWRGV*SRMDSP
Trigger: TGGAGAGTCCATTCTGGACAACACACCCCGCCATGC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTCTGGCCAGGTGGTTaGCGAAGGATCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLWPGG*RRIILM
Trigger: CATGAGGATGATCCTTCGCAAACCACCTGGCCAGAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCTCTGGCCAGGTGGTTaGCGAAGGATCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLELWPGG*RRIILM
Trigger: CATGAGGATGATCCTTCGCAAACCACCTGGCCAGAG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGG +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSGSCS*RAAIIR
Trigger: CCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGG +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSGSCS*RAAIIR
Trigger: CCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTGGCACCCGAATGGTaGTGTAGGTGTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLAPEW*CRCGPC
Trigger: GCATGGACCACACCTACACAACCATTCGGGTGCCAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCTGGCACCCGAATGGTaGTGTAGGTGTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLAPEW*CRCGPC
Trigger: GCATGGACCACACCTACACAACCATTCGGGTGCCAG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTGGCACCCGAATGGTaGTGTAGGTGTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLAPEW*CRCGPC
Trigger: GCATGGACCACACCTACACAACCATTCGGGTGCCAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTGTTCTGGCCGTATTaGCAATCATGCGCTCCCACG +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLFWPY*QSCAPT
Trigger: CGTGGGAGCGCATGATTGCAAATACGGCCAGAACAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409036.5
CDS GCA 90 bp GCCATATACTGTCGATATTTCTCCCATAGTGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCACTGCTCTCCCTGGTAACGATGGTT +
Preference number: 5 (lower is better)
Translates to: AIYCRYFSHSALKSF*SMRSSSLLSLVTMV
Trigger: AACCATCGTTACCAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGAAATATCGACAGTATATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000484331.5
CDS GCA 90 bp TGCCACTCCATGGAAAAGCTTGAAGACACAGGAATGAGACCCTGGTaGAGACATAAGTCCAAGTCATCGAAGCAGGCTTCCGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CHSMEKLEDTGMRPW*RHKSKSSKQASAWF
Trigger: AAACCAAGCGGAAGCCTGCTTCGATGACTTGGACTTATGTCTGCACCAGGGTCTCATTCCTGTGTCTTCAAGCTTTTCCATGGAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 90 bp TTTTGCCACTCCATGGAAAAGCTTGAAGACACAGGAATGAGACCCTaGTGCAGACATAAGTCCAAGTCATCGAAGCAGGCTTCCGCTTGG +
Preference number: 5 (lower is better)
Translates to: FCHSMEKLEDTGMRP*CRHKSKSSKQASAW
Trigger: CCAAGCGGAAGCCTGCTTCGATGACTTGGACTTATGTCTGCACCAGGGTCTCATTCCTGTGTCTTCAAGCTTTTCCATGGAGTGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGCATGGCGGGGTGTGTaGTCCAGAATGGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAAWRGV*SRMDSP
Trigger: TGGAGAGTCCATTCTGGACAACACACCCCGCCATGC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACTCTGGCCAGGTGGTTaGCGAAGGATCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELLWPGG*RRIILM
Trigger: CATGAGGATGATCCTTCGCAAACCACCTGGCCAGAG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGG +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSGSCS*RAAIIR
Trigger: CCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCTCCAACTCTGGCAGTaGCTCCTTGAGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLQLWQ*LLEGSN
Trigger: ATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGAG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTGGCACCCGAATGGTaGTGTAGGTGTGGTCCATGC +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLAPEW*CRCGPC
Trigger: GCATGGACCACACCTACACAACCATTCGGGTGCCAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCCTCCGGAACTCATCTaGACTATGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCPPELI*TMIRPS
Trigger: GGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACCTCCGGAACTCATCTaGACTATGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELPPELI*TMIRPS
Trigger: GGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 90 bp TCTGAAGGGACCTTGGTAATGGTGTTAGCAGGACGAAGAGGAACGTaGGGTTCAATGAGAGGTGTGTTCTCCTTGTCAGGAATCCTGTCA +
Preference number: 5 (lower is better)
Translates to: SEGTLVMVLAGRRGT*GSMRGVFSLSGILS
Trigger: TGACAGGATTCCTGACAAGGAGAACACACCTCTCATTGAACCTCACGTTCCTCTTCGTCCTGCTAACACCATTACCAAGGTCCCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473003.5
ENST00000540783.5
CDS CCA 90 bp TGTACCTTCATTGCCGTTCATTCCCTGTTCGTGTCTACTACTGAGTaGCTCTCAGTCCACAGAAAGGAAACTGGTGCTGATGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CTFIAVHSLFVSTTE*LSVHRKETGADGSP
Trigger: TGGAGAACCATCAGCACCAGTTTCCTTTCTGTGGACTGAGAGCCACTCAGTAGTAGACACGAACAGGGAATGAACGGCAATGAAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 90 bp GATAGAATAAATATTTGTCTTGGAAATGGTGCTCCTGGTCCACTATaGGAAACATGGAAGCACGTGTCAGCTGCAGCACCTCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: DRINICLGNGAPGPL*ETWKHVSAAAPRPH
Trigger: GTGAGGCCGAGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCAGGAGCACCATTTCCAAGACAAATATTTATTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGGGACAGCATACCAGTTaGTTCCAATATCACCCTGGC +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEGQHTS*FQYHPG
Trigger: GCCAGGGTGATATTGGAACAAACTGGTATGCTGTCC...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACCACATGCCAACAGCTaGAGTCCGGGAGTGAACACA +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAPHANS*SPGVNT
Trigger: TGTGTTCACTCCCGGACTCAAGCTGTTGGCATGTGG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCCTGGTCCACGTGGTaGAGAACACCATCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESWSTW*RTPSSN
Trigger: GTTAGAAGATGGTGTTCTCAACCACGTGGACCAGGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTCTGGCCAGGTGGTTaGCGAAGGATCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLWPGG*RRIILM
Trigger: CATGAGGATGATCCTTCGCAAACCACCTGGCCAGAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACTCTGGCCAGGTGGTTaGCGAAGGATCATCCTCATG +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMALWPGG*RRIILM
Trigger: CATGAGGATGATCCTTCGCAAACCACCTGGCCAGAG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAGACACGTCATCCTCTaGCAGGAGGTCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGRHVIL*QEVSIH
Trigger: ATGTATGGAGACCTCCTGCAAGAGGATGACGTGTCT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCTCCAACTCTGGCAGTaGCTCCTTGAGGGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLQLWQ*LLEGSN
Trigger: ATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGAG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCCTCCGGAACTCATCTaGACTATGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFPPELI*TMIRPS
Trigger: GGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCCTCCGGAACTCATCTaGACTATGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFPPELI*TMIRPS
Trigger: GGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCPLFQQ*GLPVLV
Trigger: TACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 90 bp CGGGCAAGCAAACAGGCGTCCATTAATGGTGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAGCACCACCTTTTCTCCTCCGGAACT +
Preference number: 5 (lower is better)
Translates to: RASKQASINGERRKY*NIIRFEHHLFSSGT
Trigger: AGTTCCGGAGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTCAGTATTTACGACGCTCACCATTAATGGACGCCTGTTTGCTTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 90 bp ATCCTGGTGACTGCTGGTCTCAGATACTTTAACATCCAAAGACCCTaGCAGGACAGCATACCAGTTTGTTCCAATATCACCCTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: ILVTAGLRYFNIQRP*QDSIPVCSNITLAK
Trigger: TTTCGCCAGGGTGATATTGGAACAAACTGGTATGCTGTCCTGGCAGGGTCTTTGGATGTTAAAGTATCTGAGACCAGCAGTCACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS GCA 90 bp GCATCTTCTGAGATTTGCTTGACAATCTTCTCCAACTCTGGCAGTTaGTCCTTGAGGGCAGCAATCATCCGGGCATCATCTGATACAGAT +
Preference number: 5 (lower is better)
Translates to: ASSEICLTIFSNSGS*SLRAAIIRASSDTD
Trigger: ATCTGTATCAGATGATGCCCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGAGAAGATTGTCAAGCAAATCTCAGAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp TCCCTTAGGATCCGGTTGAAATCCTCCTTGTCTACTCTTAAGAAATaGCAGTTATCTTCTCGTAAGACGATAGAGGCAGCTCGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SLRIRLKSSLSTLKK*QLSSRKTIEAARGA
Trigger: TGCCCCACGAGCTGCCTCTATCGTCTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTTCTCCCATAGTGCCTaGAAGTCCTTCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCFSHSA*KSFCSM
Trigger: CATCGAGCAGAAGGACTTCAAGGCACTATGGGAGAA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATTCTCCCATAGTGCCTaGAAGTCCTTCTGCTCGATG +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQFSHSA*KSFCSM
Trigger: CATCGAGCAGAAGGACTTCAAGGCACTATGGGAGAA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCCTGGTCCACGTGGTaGAGAACACCATCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSWSTW*RTPSSN
Trigger: GTTAGAAGATGGTGTTCTCAACCACGTGGACCAGGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCCTGGTCCACGTGGTaGAGAACACCATCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSWSTW*RTPSSN
Trigger: GTTAGAAGATGGTGTTCTCAACCACGTGGACCAGGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTCCCTTAGGATCCGGTaGAAATCCTCCTTGTCTACT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSLRIR*KSSLST
Trigger: AGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCCCTTAGGATCCGGTaGAAATCCTCCTTGTCTACT +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESLRIR*KSSLST
Trigger: AGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAGACACGTCATCCTCTaGCAGGAGGTCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELRHVIL*QEVSIH
Trigger: ATGTATGGAGACCTCCTGCAAGAGGATGACGTGTCT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGCTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLSSPV*NCCKRT
Trigger: GGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAG...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCCTCCGGAACTCATCTaGACTATGATCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLPPELI*TMIRPS
Trigger: GGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNPLFQQ*GLPVLV
Trigger: TACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFPLFQQ*GLPVLV
Trigger: TACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGAAGGGACGTTCTCCTaGTCAGGAATCCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELEGTFS*SGILSL
Trigger: CAATGACAGGATTCCTGACAAGGAGAACGTCCCTTC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538974.5
CDS TCA 90 bp GAGGTGCTCGAGAGAGAATGGCATTTCGTAAAATTTTTCCAGCTCTaGGGATCTTCTCTGAAGGGACGTTCTCCTTGTCAGGAATCCTGT +
Preference number: 5 (lower is better)
Translates to: EVLEREWHFVKFFQL*GSSLKGRSPCQESC
Trigger: ACAGGATTCCTGACAAGGAGAACGTCCCTTCAGAGAAGATCCTCAGAGCTGGAAAAATTTTACGAAATGCCATTCTCTCTCGAGCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473043.5
ENST00000538974.5
CDS CCA 90 bp CAGTCGAGTGAAGATTATATCCACATCTTCGCTGGATCGCTCCAGTaGTCTCAACATAGCCATTACTGTAGGCACTGGGAATCTCATTTG +
Preference number: 5 (lower is better)
Translates to: QSSEDYIHIFAGSLQ*SQHSHYCRHWESHL
Trigger: CAAATGAGATTCCCAGTGCCTACAGTAATGGCTATGTTGAGACCACTGGAGCGATCCAGCGAAGATGTGGATATAATCTTCACTCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGGACAGCATACCAGTTaGTTCCAATATCACCCTGGC +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFGQHTS*FQYHPG
Trigger: GCCAGGGTGATATTGGAACAAACTGGTATGCTGTCC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTCAGGAATCCTGTCATaGTTAGAGCCCGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSGILS*LEPVSI
Trigger: TATGGAAACGGGCTCTAACAATGACAGGATTCCTGA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAGAGGTGTGTTCTCCTaGTCAGGAATCCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTRGVFS*SGILSL
Trigger: CAATGACAGGATTCCTGACAAGGAGAACACACCTCT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTAGAGGTGTGTTCTCCTaGTCAGGAATCCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCRGVFS*SGILSL
Trigger: CAATGACAGGATTCCTGACAAGGAGAACACACCTCT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTTCTCTGAAGGGACCTaGGTAATGGTGTTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTFSEGT*VMVLAG
Trigger: TCCTGCTAACACCATTACCAAGGTCCCTTCAGAGAA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATTCTCTGAAGGGACCTaGGTAATGGTGTTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELFSEGT*VMVLAG
Trigger: TCCTGCTAACACCATTACCAAGGTCCCTTCAGAGAA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATCCTGGTCCACGTGGTaGAGAACACCATCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMASWSTW*RTPSSN
Trigger: GTTAGAAGATGGTGTTCTCAACCACGTGGACCAGGA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTCCTGGTCCACGTGGTaGAGAACACCATCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFSWSTW*RTPSSN
Trigger: GTTAGAAGATGGTGTTCTCAACCACGTGGACCAGGA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTTCACTAGTGCTAACTaGCCGAAGTCATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGFTSAN*PKSSPS
Trigger: TGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGAA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTCCCTTAGGATCCGGTaGAAATCCTCCTTGTCTACT +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTSLRIR*KSSLST
Trigger: AGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAGACACGTCATCCTCTaGCAGGAGGTCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNRHVIL*QEVSIH
Trigger: ATGTATGGAGACCTCCTGCAAGAGGATGACGTGTCT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGACACGTCATCCTCTaGCAGGAGGTCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRHVIL*QEVSIH
Trigger: ATGTATGGAGACCTCCTGCAAGAGGATGACGTGTCT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAACCTTGTGCTTCTTTaGTGGTGCCTTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLENLVLL*WCLCIF
Trigger: GAAGATGCAAAGGCACCACAAAAGAAGCACAAGGTT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTGTTGCAAAAGAACCTaGTGCTTCTTTTGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGCCKRT*CFFCGA
Trigger: GGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGCCCGTATTGAACTGTaGCAAAAGAACCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGARIEL*QKNLVL
Trigger: AAGCACAAGGTTCTTTTGCAACAGTTCAATACGGGC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLSSPV*NCCKRT
Trigger: GGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLPLFQQ*GLPVLV
Trigger: TACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAATCAGGATTGAAGGGTaGGCTCCTGTAGTATCTCAC +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQIRIEG*APVVSH
Trigger: GTGAGATACTACAGGAGCCAACCCTTCAATCCTGAT...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGCCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLECCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATCAGGAATCCTGTCATaGTTAGAGCCCGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQSGILS*LEPVSI
Trigger: TATGGAAACGGGCTCTAACAATGACAGGATTCCTGA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCAGGAATCCTGTCATaGTTAGAGCCCGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSGILS*LEPVSI
Trigger: TATGGAAACGGGCTCTAACAATGACAGGATTCCTGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTAGAGGTGTGTTCTCCTaGTCAGGAATCCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRGVFS*SGILSL
Trigger: CAATGACAGGATTCCTGACAAGGAGAACACACCTCT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAGAGGTGTGTTCTCCTaGTCAGGAATCCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMARGVFS*SGILSL
Trigger: CAATGACAGGATTCCTGACAAGGAGAACACACCTCT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTTCTCTGAAGGGACCTaGGTAATGGTGTTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFFSEGT*VMVLAG
Trigger: TCCTGCTAACACCATTACCAAGGTCCCTTCAGAGAA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTTCTCTGAAGGGACCTaGGTAATGGTGTTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFFSEGT*VMVLAG
Trigger: TCCTGCTAACACCATTACCAAGGTCCCTTCAGAGAA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATTCACTAGTGCTAACTaGCCGAAGTCATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELFTSAN*PKSSPS
Trigger: TGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGAA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTTCACTAGTGCTAACTaGCCGAAGTCATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTFTSAN*PKSSPS
Trigger: TGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGAA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCCCTTAGGATCCGGTaGAAATCCTCCTTGTCTACT +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSLRIR*KSSLST
Trigger: AGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEQHQDI*VMFFKS
Trigger: AGACTTAAAGAACATGACCAAGATGTCTTGGTGCTG...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAGACACGTCATCCTCTaGCAGGAGGTCTCCATACAT +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLRHVIL*QEVSIH
Trigger: ATGTATGGAGACCTCCTGCAAGAGGATGACGTGTCT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTCTTTTGTGGTGCCTTaGCATCTTCTGAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGSFVVP*HLLRFA
Trigger: AGCAAATCTCAGAAGATGCAAAGGCACCACAAAAGA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAACCTTGTGCTTCTTTaGTGGTGCCTTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTNLVLL*WCLCIF
Trigger: GAAGATGCAAAGGCACCACAAAAGAAGCACAAGGTT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAACCTTGTGCTTCTTTaGTGGTGCCTTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELNLVLL*WCLCIF
Trigger: GAAGATGCAAAGGCACCACAAAAGAAGCACAAGGTT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGTTGCAAAAGAACCTaGTGCTTCTTTTGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTCCKRT*CFFCGA
Trigger: GGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGTTGCAAAAGAACCTaGTGCTTCTTTTGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELCCKRT*CFFCGA
Trigger: GGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGCCCGTATTGAACTGTaGCAAAAGAACCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQARIEL*QKNLVL
Trigger: AAGCACAAGGTTCTTTTGCAACAGTTCAATACGGGC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCCTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFLSSPV*NCCKRT
Trigger: GGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAG...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLSSPV*NCCKRT
Trigger: GGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCATCAGGATTGAAGGGTaGGCTCCTGTAGTATCTCAC +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFIRIEG*APVVSH
Trigger: GTGAGATACTACAGGAGCCAACCCTTCAATCCTGAT...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATATCAGGATTGAAGGGTaGGCTCCTGTAGTATCTCAC +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNIRIEG*APVVSH
Trigger: GTGAGATACTACAGGAGCCAACCCTTCAATCCTGAT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAATCAGGATTGAAGGGTaGGCTCCTGTAGTATCTCAC +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAIRIEG*APVVSH
Trigger: GTGAGATACTACAGGAGCCAACCCTTCAATCCTGAT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQCCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLETGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGGCTTGCTAGTTCTCTaGACAAGGCTATTTCTACCA +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELGLLVL*TRLFLP
Trigger: TGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAACAAAATGTACCTTCATaGCCGTTCATTCCCTGTTCG +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQQNVPS*PFIPCS
Trigger: CGAACAGGGAATGAACGGCAATGAAGGTACATTTTG...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS GCA 90 bp GCTCCTAATAACTTCACTCCCTTCCTTTCTGGATTTGAATCATTTTaGCACTCCATGGAAAAGCTTGAAGACACAGGAATGAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: APNNFTPFLSGFESF*HSMEKLEDTGMRPW
Trigger: CCAGGGTCTCATTCCTGTGTCTTCAAGCTTTTCCATGGAGTGGCAAAATGATTCAAATCCAGAAAGGAAGGGAGTGAAGTTATTAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCAGGAATCCTGTCATaGTTAGAGCCCGTTTCCATA +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSGILS*LEPVSI
Trigger: TATGGAAACGGGCTCTAACAATGACAGGATTCCTGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTTCACTAGTGCTAACTaGCCGAAGTCATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFFTSAN*PKSSPS
Trigger: TGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGAA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTCACTAGTGCTAACTaGCCGAAGTCATCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNFTSAN*PKSSPS
Trigger: TGAAGGAGATGACTTCGGCAAGTTAGCACTAGTGAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTACGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELRLKSS*STLKKW
Trigger: CCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCG...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTCGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCRLKSS*STLKKW
Trigger: CCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCG...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTQHQDI*VMFFKS
Trigger: AGACTTAAAGAACATGACCAAGATGTCTTGGTGCTG...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGTTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGLPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTCTTCTGAGATTTGCTaGACAATCTTCTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLESSEIC*TIFSNS
Trigger: AGAGTTGGAGAAGATTGTCAAGCAAATCTCAGAAGA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTCTTTTGTGGTGCCTTaGCATCTTCTGAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCSFVVP*HLLRFA
Trigger: AGCAAATCTCAGAAGATGCAAAGGCACCACAAAAGA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAAACCTTGTGCTTCTTTaGTGGTGCCTTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMANLVLL*WCLCIF
Trigger: GAAGATGCAAAGGCACCACAAAAGAAGCACAAGGTT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAACCTTGTGCTTCTTTaGTGGTGCCTTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNNLVLL*WCLCIF
Trigger: GAAGATGCAAAGGCACCACAAAAGAAGCACAAGGTT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGTTGCAAAAGAACCTaGTGCTTCTTTTGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFCCKRT*CFFCGA
Trigger: GGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTGTTGCAAAAGAACCTaGTGCTTCTTTTGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFCCKRT*CFFCGA
Trigger: GGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGCCCGTATTGAACTGTaGCAAAAGAACCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFARIEL*QKNLVL
Trigger: AAGCACAAGGTTCTTTTGCAACAGTTCAATACGGGC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLLSSPV*NCCKRT
Trigger: GGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTAGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCAGCAAAGAAGATGGCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: SAKKMAQVEMKQGSHKLGMVLIS*SCIRIE
Trigger: TTCAATCCTGATGCAGCTCAAGCTAATAAGAACCAT...CCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGCCATCTTCTTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEMVLIS*SCIRIE
Trigger: TTCAATCCTGATGCAGCTCAAGCTAATAAGAACCAT...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFCCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFCCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATGGCTTGCTAGTTCTCTaGACAAGGCTATTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNGLLVL*TRLFLP
Trigger: TGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCC...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGGCTTGCTAGTTCTCTaGACAAGGCTATTTCTACCA +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFGLLVL*TRLFLP
Trigger: TGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFRLKSS*STLKKW
Trigger: CCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFQHQDI*VMFFKS
Trigger: AGACTTAAAGAACATGACCAAGATGTCTTGGTGCTG...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNQHQDI*VMFFKS
Trigger: AGACTTAAAGAACATGACCAAGATGTCTTGGTGCTG...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCT +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAQHQDI*VMFFKS
Trigger: AGACTTAAAGAACATGACCAAGATGTCTTGGTGCTG...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQLPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATCTTCTGAGATTTGCTaGACAATCTTCTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELSSEIC*TIFSNS
Trigger: AGAGTTGGAGAAGATTGTCAAGCAAATCTCAGAAGA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTCTTTTGTGGTGCCTTaGCATCTTCTGAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNSFVVP*HLLRFA
Trigger: AGCAAATCTCAGAAGATGCAAAGGCACCACAAAAGA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCTTTTGTGGTGCCTTaGCATCTTCTGAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSFVVP*HLLRFA
Trigger: AGCAAATCTCAGAAGATGCAAAGGCACCACAAAAGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGCCCGTATTGAACTGTaGCAAAAGAACCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLARIEL*QKNLVL
Trigger: AAGCACAAGGTTCTTTTGCAACAGTTCAATACGGGC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFETSLG*STTFSP
Trigger: AGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCACAAGTGGAAATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGGTATGCTAAATCTTaGGAGCTCATCAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: AQVEMKQGSHKLGIPKLEWYAKS*ELISSK
Trigger: TTTTGAACTGATGAGCTCCAAAGATTTAGCATACCA...CTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCATTTCCACTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCMVLIS*SCIRIE
Trigger: TTCAATCCTGATGCAGCTCAAGCTAATAAGAACCAT...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTGTTGCTTTGGGCATTaGAAATGTCTATGGTCGACG +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLCCFGH*KCLWST
Trigger: CGTCGACCATAGACATTTCAAATGCCCAAAGCAACA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATG +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFTGDKL*LWAFEM
Trigger: CATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGT...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTG +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFGIFER*WTGDKL
Trigger: CAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTGGCTTGCTAGTTCTCTaGACAAGGCTATTTCTACCA +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLGLLVL*TRLFLP
Trigger: TGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCC...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTAAAAATGTCAGGGGCTaGCTAGTTCTCTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLKNVRG*LVLLTR
Trigger: CCTTGTCAAGAGAACTAGCAAGCCCCTGACATTTTT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp AATGGCATTTTTGAAAGATTGTGGACTGGAGACAAACTGTTGCTTTaGGCATTTGAAATGTCTATGGTCGACGAGGCTCTAATCTGTGTG +
Preference number: 5 (lower is better)
Translates to: NGIFERLWTGDKLLL*AFEMSMVDEALICV
Trigger: CACACAGATTAGAGCCTCGTCGACCATAGACATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000484645.1
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGG +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLRLKSS*STLKKW
Trigger: CCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCG...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMALPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCACAAGTGGAAATTTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: LHVGLIQHFSKEDGTSGNLPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...ATTTCCACTTGTGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTTGCTTCATTTAAAGTaGCCTCAAGGCGTATTGTTT +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCLLHLK*PQGVLF
Trigger: AAACAATACGCCTTGAGGCAACTTTAAATGAAGCAA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TGTCAGGGGCTTGCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTTGCTTCATTTAAAGTaGCCTCAAGGCGTATTGTTT +
Preference number: 5 (lower is better)
Translates to: CQGLASSLDKAISTKLFTLLHLK*PQGVLF
Trigger: AAACAATACGCCTTGAGGCAACTTTAAATGAAGCAA...CGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGCAAGCCCCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GCTAGTTCTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCTCTTCTGAGATTTGCTaGACAATCTTCTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: ASSLDKAISTKLFTWALFSSEIC*TIFSNS
Trigger: AGAGTTGGAGAAGATTGTCAAGCAAATCTCAGAAGA...GAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAGAACTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp AGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAAGATGTTGAGTTATGGTATGCTAAATCTTaGGAGCTCATCAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: RFLNTFPKPQAPNQDVELWYAKS*ELISSK
Trigger: TTTTGAACTGATGAGCTCCAAAGATTTAGCATACCA...TAACTCAACATCTTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp GGTAAGCTGAATGCAGCCCTGAGGTGTCTCAGGATGTGTTTTTGCTTGTTTTGTTGGTATGCTAAATCTTaGGAGCTCATCAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GKLNAALRCLRMCFCLFCWYAKS*ELISSK
Trigger: TTTTGAACTGATGAGCTCCAAAGATTTAGCATACCA...ACAAAACAAGCAAAAACACATCCTGAGACACCTCAGGGCTGCATTCAGCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TTGGACTTCTATAGATTCCTCAACACCTTCCCGAAACCCCAGGCTCCAAATCAATGGTATGCTAAATCTTaGGAGCTCATCAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LDFYRFLNTFPKPQAPNQWYAKS*ELISSK
Trigger: TTTTGAACTGATGAGCTCCAAAGATTTAGCATACCA...TTGATTTGGAGCCTGGGGTTTCGGGAAGGTGTTGAGGAATCTATAGAAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCAATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAMVLIS*SCIRIE
Trigger: TTCAATCCTGATGCAGCTCAAGCTAATAAGAACCAT...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 90 bp CCCTTAGTGATGTATGAGAGCTGGACTGATTTATCTTGGCTTTTCTaGAGCATATTAGCACTAATGTTTCTGCGTATGCATCCTACCTTT +
Preference number: 5 (lower is better)
Translates to: PLVMYESWTDLSWLF*SILALMFLRMHPTF
Trigger: AAAGGTAGGATGCATACGCAGAAACATTAGTGCTAATATGCTGCAGAAAAGCCAAGATAAATCAGTCCAGCTCTCATACATCACTAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473003.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTTGCCTCAAGGCGTATaGTTTCTAGAAAATGCTCTA +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLLPQGV*FLENAL
Trigger: TAGAGCATTTTCTAGAAACAATACGCCTTGAGGCAA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp ATGAAACAGGGTAGCCACAAACTGGGGATTCCTAAGCTAGAGTGTGTAAGCTTTTTGCTTCATTTAAAGTaGCCTCAAGGCGTATTGTTT +
Preference number: 5 (lower is better)
Translates to: MKQGSHKLGIPKLECVSFLLHLK*PQGVLF
Trigger: AAACAATACGCCTTGAGGCAACTTTAAATGAAGCAA...AAAGCTTACACACTCTAGCTTAGGAATCCCCAGTTTGTGGCTACCCTGTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTTCTTCTGAGATTTGCTaGACAATCTTCTCCAACTCT +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLSSEIC*TIFSNS
Trigger: AGAGTTGGAGAAGATTGTCAAGCAAATCTCAGAAGA...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp TCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTCAGCAAAGAAGATGGCATGGTATGCTAAATCTTaGGAGCTCATCAGTTCAAAA +
Preference number: 5 (lower is better)
Translates to: STKLFTWALFNTSAKKMAWYAKS*ELISSK
Trigger: TTTTGAACTGATGAGCTCCAAAGATTTAGCATACCA...TGCCATCTTCTTTGCTGAAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS-3UTR CAA 90 bp CTCTTGACAAGGCTATTTCTACCAAACTCTTCACGTGGGCCTTATTCAACACTTATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAA +
Preference number: 5 (lower is better)
Translates to: LLTRLFLPNSSRGPYSTLMVLIS*SCIRIE
Trigger: TTCAATCCTGATGCAGCTCAAGCTAATAAGAACCAT...AAGTGTTGAATAAGGCCCACGTGAAGAGTTTGGTAGAAATAGCCTTGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 90 bp GGCAATACAGTCAGTAGTAGCATAAATGGCATTTTTGAAAGATTGTaGACTGGAGACAAACTGTTGCTTTGGGCATTTGAAATGTCTATG +
Preference number: 5 (lower is better)
Translates to: GNTVSSSINGIFERL*TGDKLLLWAFEMSM
Trigger: CATAGACATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCCATTTATGCTACTACTGACTGTATTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000484645.1
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp CACTCGGCAGAGGAGGAAGAATGGGCAGCGTGCGCAGCGACCATGTaGAGCGGCGGCGCGCGGTGTCCCTGGCTGCGGCGACCTCCCGCG +
Preference number: 6 (lower is better)
Translates to: HSAEEEEWAACAATM*SGGARCPWLRRPPA
Trigger: CGCGGGAGGTCGCCGCAGCCAGGGACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS TCA 72 bp AGGAGGAAGAATGGGCAGCGTGCGCAGCGACCATGTTaGGCGGCGGCGCGCGGTGTCCCTGGCTGCGGCGAC +
Preference number: 6 (lower is better)
Translates to: RRKNGQRAQRPC*AAARGVPGCGD
Trigger: GTCGCCGCAGCCAGGGACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS GCA 72 bp GCGATCCACTCGGCAGAGGAGGAAGAATGGGCAGCGTaGGCAGCGACCATGTTGAGCGGCGGCGCGCGGTGT +
Preference number: 6 (lower is better)
Translates to: AIHSAEEEEWAA*AATMLSGGARC
Trigger: ACACCGCGCGCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGTGGATCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397081.8
CDS CCA 72 bp TCCAGGCAGGCGATCCACTCGGCAGAGGAGGAAGAATaGGCAGCGTGCGCAGCGACCATGTTGAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: SRQAIHSAEEEE*AACAATMLSGG
Trigger: GCCGCCGCTCAACATGGTCGCTGCGCACGCTGCCCATTCTTCCTCCTCTGCCGAGTGGATCGCCTGCCTGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397081.8
ENST00000409036.5
CDS GCA 72 bp GATCAGGCCCTCCCCGGAGCCCAGCTTGTCGGCAACTaGACTGATGACTTCCTTCACCGAAGTGGCCACTGG +
Preference number: 6 (lower is better)
Translates to: DQALPGAQLVGN*TDDFLHRSGHW
Trigger: CCAGTGGCCACTTCGGTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGAGGGCCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp CCGGAACTCATCTTGACTATGATCAGGCCCTCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATGACTTCCTTCACCGAAGTGGCCACT +
Preference number: 6 (lower is better)
Translates to: PELILTMIRPSPEPS*SATALMTSFTEVAT
Trigger: AGTGGCCACTTCGGTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGAGGGCCTGATCATAGTCAAGATGAGTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 72 bp GCGGAGCAGTTCACTGCTCTCCCTGGTAACGATGGTTaGATGGCGGGGTGTGTTGTCCAGAATGGACTCTCC +
Preference number: 6 (lower is better)
Translates to: AEQFTALPGNDG*MAGCVVQNGLS
Trigger: GGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAGCAGTGAACTGCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS CCA 72 bp CTTGGAAATGGTGCTCCTGGTCCACTATGGGAAACATaGAAGCACGTGTCAGCTGCAGCACCTCGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: LGNGAPGPLWET*KHVSAAAPRPH
Trigger: GTGAGGCCGAGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCAGGAGCACCATTTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS CAA 72 bp GGTTTGAGCACCACCTTTTCTCCTCCGGAACTCATCTaGACTATGATCAGGCCCTCCCCGGAGCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: GLSTTFSPPELI*TMIRPSPEPSL
Trigger: CAAGCTGGGCTCCGGGGAGGGCCTGATCATAGTCAAGATGAGTTCCGGAGGAGAAAAGGTGGTGCTCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp AGTTCACTGCTCTCCCTGGTAACGATGGTTGCATGGCGGGGTGTGTaGTCCAGAATGGACTCTCCAAAGGCCGTCCCAATTCCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: SSLLSLVTMVAWRGV*SRMDSPKAVPIPRV
Trigger: TACCCTGGGAATTGGGACGGCCTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAGCAGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS GCA 72 bp TTAGGGCTCACCTCCCATAGTGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCACTGCTCTCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: LGLTSHSALKSF*SMRSSSLLSLV
Trigger: TACCAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGGTGAGCCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS GCA 72 bp CACCTCGGCCTCACAGCTCCGTTTACTAGAAACAAATaGAGAGTGTCAGGCAGGAGGGCCAAGTGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: HLGLTAPFTRNK*RVSGRRAKWQQ
Trigger: TTGCTGCCACTTGGCCCTCCTGCCTGACACTCTGCATTTGTTTCTAGTAAACGGAGCTGTGAGGCCGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS CAA 72 bp CTCTCCCTGGTAACGATGGTTGCATGGCGGGGTGTGTaGTCCAGAATGGACTCTCCAAAGGCCGTCCCAATT +
Preference number: 6 (lower is better)
Translates to: LSLVTMVAWRGV*SRMDSPKAVPI
Trigger: AATTGGGACGGCCTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS CAA 72 bp ATCTTGACTATGATCAGGCCCTCCCCGGAGCCCAGCTaGTCGGCAACTGCACTGATGACTTCCTTCACCGAA +
Preference number: 6 (lower is better)
Translates to: ILTMIRPSPEPS*SATALMTSFTE
Trigger: TTCGGTGAAGGAAGTCATCAGTGCAGTTGCCGACAAGCTGGGCTCCGGGGAGGGCCTGATCATAGTCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 72 bp TGGTCCACTATGGGAAACATGGAAGCACGTGTCAGCTaGAGCACCTCGGCCTCACAGCTCCGTTTACTAGAA +
Preference number: 6 (lower is better)
Translates to: WSTMGNMEARVS*STSASQLRLLE
Trigger: TTCTAGTAAACGGAGCTGTGAGGCCGAGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS CCA 72 bp AGCAGTTCACTGCTCTCCCTGGTAACGATGGTTGCATaGCGGGGTGTGTTGTCCAGAATGGACTCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: SSSLLSLVTMVA*RGVLSRMDSPK
Trigger: CTTTGGAGAGTCCATTCTGGACAACACACCCCGCCATGCAACCATCGTTACCAGGGAGAGCAGTGAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS CCA 72 bp AGAACTTCATCAGAGCCGCGGATAGGCTGGCGCTTCTaGGCTCTCTCATCGCCCGTATTGAACTGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: RTSSEPRIGWRF*ALSSPVLNCCK
Trigger: TTTGCAACAGTTCAATACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTCTGATGAAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 72 bp ACCTTAAACAGAACTTCATCAGAGCCGCGGATAGGCTaGCGCTTCTGGGCTCTCTCATCGCCCGTATTGAAC +
Preference number: 6 (lower is better)
Translates to: TLNRTSSEPRIG*RFWALSSPVLN
Trigger: GTTCAATACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTCTGATGAAGTTCTGTTTAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 72 bp AACTGCACTGATGACTTCCTTCACCGAAGTGGCCACTaGCACCCGAATGGTTGTGTAGGTGTGGTCCATGCA +
Preference number: 6 (lower is better)
Translates to: NCTDDFLHRSGH*HPNGCVGVVHA
Trigger: TGCATGGACCACACCTACACAACCATTCGGGTGCCAGTGGCCACTTCGGTGAAGGAAGTCATCAGTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 72 bp GTTGGCTCCTGTAGTATCTCACTGTTCTGGCCGTATTaGCAATCATGCGCTCCCACGTTAGTGCCAAGCGGC +
Preference number: 6 (lower is better)
Translates to: VGSCSISLFWPY*QSCAPTLVPSG
Trigger: GCCGCTTGGCACTAACGTGGGAGCGCATGATTGCAAATACGGCCAGAACAGTGAGATACTACAGGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409036.5
CDS CAA 72 bp GACAAAGAAGCCTTAGGGCTCACCTCCCATAGTGCCTaGAAGTCCTTCTGCTCGATGCGGAGCAGTTCACTG +
Preference number: 6 (lower is better)
Translates to: DKEALGLTSHSA*KSFCSMRSSSL
Trigger: CAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGGTGAGCCCTAAGGCTTCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS CAA 90 bp GAGCCGCGGATAGGCTGGCGCTTCTGGGCTCTCTCATCGCCCGTATaGAACTGTTGCAAAAGAACCTTGTGCTTCTTTTGTGGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: EPRIGWRFWALSSPV*NCCKRTLCFFCGAF
Trigger: AAAGGCACCACAAAAGAAGCACAAGGTTCTTTTGCAACAGTTCAATACGGGCGATGAGAGAGCCCAGAAGCGCCAGCCTATCCGCGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp GCATTAATTGACAAAGAAGCCTTAGGGCTCACCTCCCATAGTGCCTaGAAGTCCTTCTGCTCGATGCGGAGCAGTTCACTGCTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: ALIDKEALGLTSHSA*KSFCSMRSSSLLSL
Trigger: CAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGGTGAGCCCTAAGGCTTCTTTGTCAATTAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS CAA 90 bp AGAAGCTCTGTTCCCTGCTGGGACCTTCTCCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCTGACTGTATTCGCCTCCACGTCCCT +
Preference number: 6 (lower is better)
Translates to: RSSVPCWDLLQHQDI*VMFFKSDCIRLHVP
Trigger: AGGGACGTGGAGGCGAATACAGTCAGACTTAAAGAACATGACCAAGATGTCTTGGTGCTGGAGAAGGTCCCAGCAGGGAACAGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 72 bp TGTCGATATTTCTCCCATAGTGCCTTGAAGTCCTTCTaGTCGATGCGGAGCAGTTCACTGCTCTCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: CRYFSHSALKSF*SMRSSSLLSLV
Trigger: TACCAGGGAGAGCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGAAATATCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000484331.5
CDS TCA 72 bp CTGCCATATACTGTCGATATTTCTCCCATAGTGCCTTaGAGTCCTTCTGCTCGATGCGGAGCAGTTCACTGC +
Preference number: 6 (lower is better)
Translates to: LPYTVDISPIVP*SPSARCGAVHC
Trigger: GCAGTGAACTGCTCCGCATCGAGCAGAAGGACTTCAAGGCACTATGGGAGAAATATCGACAGTATATGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000484331.5
CDS TCA 72 bp CTTCATTGCCGTTCATTCCCTGTTCGTGTCTACTACTaGGTGGCTCTCAGTCCACAGAAAGGAAACTGGTGC +
Preference number: 6 (lower is better)
Translates to: LHCRSFPVRVYY*VALSPQKGNWC
Trigger: GCACCAGTTTCCTTTCTGTGGACTGAGAGCCACTCAGTAGTAGACACGAACAGGGAATGAACGGCAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 72 bp TTCCCTGCTGGGACCTTCTCCAGCACCAAGACATCTTaGTCATGTTCTTTAAGTCTGACTGTATTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: FPAGTFSSTKTS*SCSLSLTVFAS
Trigger: GGAGGCGAATACAGTCAGACTTAAAGAACATGACCAAGATGTCTTGGTGCTGGAGAAGGTCCCAGCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 72 bp GTTCCCTGCTGGGACCTTCTCCAGCACCAAGACATCTaGGTCATGTTCTTTAAGTCTGACTGTATTCGCCTC +
Preference number: 6 (lower is better)
Translates to: VPCWDLLQHQDI*VMFFKSDCIRL
Trigger: GAGGCGAATACAGTCAGACTTAAAGAACATGACCAAGATGTCTTGGTGCTGGAGAAGGTCCCAGCAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 72 bp TGCTTGACAATCTTCTCCAACTCTGGCAGTTGCTCCTaGAGGGCAGCAATCATCCGGGCATCATCTGATACA +
Preference number: 6 (lower is better)
Translates to: CLTIFSNSGSCS*RAAIIRASSDT
Trigger: TGTATCAGATGATGCCCGGATGATTGCTGCCCTCAAGGAGCAACTGCCAGAGTTGGAGAAGATTGTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp ACCTTGGTAATGGTGTTAGCAGGACGAAGAGGAACGTaGGGTTCAATGAGAGGTGTGTTCTCCTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: TLVMVLAGRRGT*GSMRGVFSLSG
Trigger: TCCTGACAAGGAGAACACACCTCTCATTGAACCTCACGTTCCTCTTCGTCCTGCTAACACCATTACCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473003.5
ENST00000540783.5
CDS TCA 72 bp TCCCCCTGGTTAAACAACACAGTCCCTCCTTTGGCGTaGGACTCAAAAATGAGAACACCTGCTAACTCTCGT +
Preference number: 6 (lower is better)
Translates to: SPWLNNTVPPLA*DSKMRTPANSR
Trigger: ACGAGAGTTAGCAGGTGTTCTCATTTTTGAGTCTCACGCCAAAGGAGGGACTGTGTTGTTTAACCAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000459852.1
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 72 bp TCCATGGAAAAGCTTGAAGACACAGGAATGAGACCCTaGTGCAGACATAAGTCCAAGTCATCGAAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: SMEKLEDTGMRP*CRHKSKSSKQA
Trigger: AGCCTGCTTCGATGACTTGGACTTATGTCTGCACCAGGGTCTCATTCCTGTGTCTTCAAGCTTTTCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 72 bp ATTGCCGTTCATTCCCTGTTCGTGTCTACTACTGAGTaGCTCTCAGTCCACAGAAAGGAAACTGGTGCTGAT +
Preference number: 6 (lower is better)
Translates to: IAVHSLFVSTTE*LSVHRKETGAD
Trigger: ATCAGCACCAGTTTCCTTTCTGTGGACTGAGAGCCACTCAGTAGTAGACACGAACAGGGAATGAACGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 72 bp AATATTTGTCTTGGAAATGGTGCTCCTGGTCCACTATaGGAAACATGGAAGCACGTGTCAGCTGCAGCACCT +
Preference number: 6 (lower is better)
Translates to: NICLGNGAPGPL*ETWKHVSAAAP
Trigger: AGGTGCTGCAGCTGACACGTGCTTCCATGTTTCCCATAGTGGACCAGGAGCACCATTTCCAAGACAAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459852.1
CDS CAA 72 bp CTGACTGTATTCGCCTCCACGTCCCTTAGGATCCGGTaGAAATCCTCCTTGTCTACTCTTAAGAAATGGCAG +
Preference number: 6 (lower is better)
Translates to: LTVFASTSLRIR*KSSLSTLKKWQ
Trigger: CTGCCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGACGTGGAGGCGAATACAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp TTTGCCACTCCATGGAAAAGCTTGAAGACACAGGAATaGGACCCTGGTGCAGACATAAGTCCAAGTCATCGA +
Preference number: 6 (lower is better)
Translates to: FATPWKSLKTQE*DPGADISPSHR
Trigger: TCGATGACTTGGACTTATGTCTGCACCAGGGTCTCATTCCTGTGTCTTCAAGCTTTTCCATGGAGTGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CCA 72 bp GAAGATTATATCCACATCTTCGCTGGATCGCTCCAGTaGTCTCAACATAGCCATTACTGTAGGCACTGGGAA +
Preference number: 6 (lower is better)
Translates to: EDYIHIFAGSLQ*SQHSHYCRHWE
Trigger: TTCCCAGTGCCTACAGTAATGGCTATGTTGAGACCACTGGAGCGATCCAGCGAAGATGTGGATATAATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS CAA 72 bp GCCTCCACGTCCCTTAGGATCCGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGGCAGTTATCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: ASTSLRIRLKSS*STLKKWQLSSR
Trigger: ACGAGAAGATAACTGCCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGACGTGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 72 bp AGCTCATCAGTTCAAAAGTTCCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTAAGGGAGTCAGTGAAT +
Preference number: 6 (lower is better)
Translates to: SSSVQKFPLFQQ*GLPVLVRESVN
Trigger: ATTCACTGACTCCCTTACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGGGAACTTTTGAACTGATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp AATCTTTGGAGCTCATCAGTTCAAAAGTTCCCACTGTTCCAACAGTaGGGCCTTCCTGTTCTGGTAAGGGAGTCAGTGAATCGAATTGCT +
Preference number: 6 (lower is better)
Translates to: NLWSSSVQKFPLFQQ*GLPVLVRESVNRIA
Trigger: AGCAATTCGATTCACTGACTCCCTTACCAGAACAGGAAGGCCCAACTGTTGGAACAGTGGGAACTTTTGAACTGATGAGCTCCAAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS GCA 72 bp ACTGCTGGTCTCAGATACTTTAACATCCAAAGACCCTaGCAGGACAGCATACCAGTTTGTTCCAATATCACC +
Preference number: 6 (lower is better)
Translates to: TAGLRYFNIQRP*QDSIPVCSNIT
Trigger: GGTGATATTGGAACAAACTGGTATGCTGTCCTGGCAGGGTCTTTGGATGTTAAAGTATCTGAGACCAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397081.8
ENST00000409036.5
ENST00000464976.1
ENST00000484331.5
CDS CAA 72 bp TACATAACTCCGGACATCCTGATGGTTCTTATTAGCTaGAGCTGCATCAGGATTGAAGGGTTGGCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: YITPDILMVLIS*SCIRIEGLAPV
Trigger: TACAGGAGCCAACCCTTCAATCCTGATGCAGCTCAAGCTAATAAGAACCATCAGGATGTCCGGAGTTATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000484645.1
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp ACTGTATTCGCCTCCACGTCCCTTAGGATCCGGTTGAAATCCTCCTaGTCTACTCTTAAGAAATGGCAGTTATCTTCTCGTAAGACGATA +
Preference number: 6 (lower is better)
Translates to: TVFASTSLRIRLKSS*STLKKWQLSSRKTI
Trigger: TATCGTCTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCGGATCCTAAGGGACGTGGAGGCGAATACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp CCAGTGAGCATCTATCCTTTATTTGATCAGCAAAATGTACCTTCATaGCCGTTCATTCCCTGTTCGTGTCTACTACTGAGTGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: PVSIYPLFDQQNVPS*PFIPCSCLLLSGSQ
Trigger: CTGAGAGCCACTCAGTAGTAGACACGAACAGGGAATGAACGGCAATGAAGGTACATTTTGCTGATCAAATAAAGGATAGATGCTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397087.7
CDS CAA 72 bp ATGGTGAGCGTCGTAAATACTGAAACATCATTAGGTTaGAGCACCACCTTTTCTCCTCCGGAACTCATCTTG +
Preference number: 6 (lower is better)
Translates to: MVSVVNTETSLG*STTFSPPELIL
Trigger: CAAGATGAGTTCCGGAGGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTCAGTATTTACGACGCTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp AAACAGGCGTCCATTAATGGTGAGCGTCGTAAATACTaGAACATCATTAGGTTTGAGCACCACCTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KQASINGERRKY*NIIRFEHHLFS
Trigger: GGAGAAAAGGTGGTGCTCAAACCTAATGATGTTTCAGTATTTACGACGCTCACCATTAATGGACGCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CCA 72 bp ATCCGGTTGAAATCCTCCTTGTCTACTCTTAAGAAATaGCAGTTATCTTCTCGTAAGACGATAGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: IRLKSSLSTLKK*QLSSRKTIEAA
Trigger: AGCTGCCTCTATCGTCTTACGAGAAGATAACTGCCATTTCTTAAGAGTAGACAAGGAGGATTTCAACCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 72 bp GGCATTTTTGAAAGATTGTGGACTGGAGACAAACTGTaGCTTTGGGCATTTGAAATGTCTATGGTCGACGAG +
Preference number: 6 (lower is better)
Translates to: GIFERLWTGDKL*LWAFEMSMVDE
Trigger: CTCGTCGACCATAGACATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000484645.1
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp ATGTGTGATAGATTAGCTCCAGCTCATGCACGCAGTTaGAGAGTTCCCAATCATAAATTGTCATCTGGTATG +
Preference number: 6 (lower is better)
Translates to: MCDRLAPAHARS*RVPNHKLSSGM
Trigger: CATACCAGATGACAATTTATGATTGGGAACTCTTCAACTGCGTGCATGAGCTGGAGCTAATCTATCACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397085.3
ENST00000397087.7
ENST00000409036.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS CAA 90 bp AGTGGCAATACAGTCAGTAGTAGCATAAATGGCATTTTTGAAAGATaGTGGACTGGAGACAAACTGTTGCTTTGGGCATTTGAAATGTCT +
Preference number: 6 (lower is better)
Translates to: SGNTVSSSINGIFER*WTGDKLLLWAFEMS
Trigger: AGACATTTCAAATGCCCAAAGCAACAGTTTGTCTCCAGTCCACAATCTTTCAAAAATGCCATTTATGCTACTACTGACTGTATTGCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000484645.1
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp AATCCAGGTCTGGCTGATCCTAAGACAAAGCTGATTTaGCTATATCATGTTTTCCAGACTGGAAACAGAAAA +
Preference number: 6 (lower is better)
Translates to: NPGLADPKTKLI*LYHVFQTGNRK
Trigger: TTTTCTGTTTCCAGTCTGGAAAACATGATATAGTCAAATCAGCTTTGTCTTAGGATCAGCCAGACCTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464976.1
CDS TCA 72 bp TATGTCTTTAGGTGGTATTTTCTATCTCTTATCATGTaGGGTGCTCGAGAGAGAATGGCATTTCGTAAAATT +
Preference number: 6 (lower is better)
Translates to: YVFRWYFLSLIM*GARERMAFRKI
Trigger: AATTTTACGAAATGCCATTCTCTCTCGAGCACCTCACATGATAAGAGATAGAAAATACCACCTAAAGACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397081.8
ENST00000397087.7
ENST00000409036.5
ENST00000466030.1
ENST00000473003.5
ENST00000473043.5
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5
CDS TCA 72 bp TTTACTAGATTGTCAATGAACGTCTTGTTCCCCTCATaGGTAAATGTCATATCTTTAATGAGCAAAGGCATG +
Preference number: 6 (lower is better)
Translates to: FTRLSMNVLFPS*VNVISLMSKGM
Trigger: CATGCCTTTGCTCATTAAAGATATGACATTTACTCATGAGGGGAACAAGACGTTCATTGACAATCTAGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397081.8
ENST00000397085.3
ENST00000397087.7
ENST00000535187.5
ENST00000538974.5
ENST00000540783.5