RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000079337

Ensembl transcript IDs: ENST00000389212.7, ENST00000395358.7, ENST00000395360.6, ENST00000405493.6, ENST00000449771.7, ENST00000466322.5, ENST00000473777.5, ENST00000476259.1, ENST00000479866.5, ENST00000482843.5, ENST00000488250.5, ENST00000494764.1, ENST00000495465.6, ENST00000495953.2, ENST00000547856.5, ENST00000548434.1, ENST00000548919.5, ENST00000549151.5, ENST00000549347.1

Found 1771 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTATTGGACCACCACGGGGAGCTGATGGTCACCCTGGCTGGCTGCTaGCAGGGGCTCCAGGCTCCAGCCCGCCCTTTGGCCAGAGCCCTG +
Preference number: 1 (lower is better)
Translates to: LLDHHGELMVTLAGC*QGLQAPARPLARAL
Trigger: CAGGGCTCTGGCCAAAGGGCGGGCTGGAGCCTGGAGCCCCTGTCAGCAGCCAGCCAGGGTGACCATCAGCTCCCCGTGGTGGTCCAATAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp TGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTaGGCCTGGCCACAGCCTGCCTCAGGCCTTCACAGGGAAGTGGAG +
Preference number: 1 (lower is better)
Translates to: WGGVALPGVYPTVRA*AWPQPASGLHREVE
Trigger: CTCCACTTCCCTGTGAAGGCCTGAGGCAGGCTGTGGCCAGGCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp GGCTCCAGCCCGCCCTTTGGCCAGAGCCCTGGAGGCACATCTGGGTaGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCAGCATGGG +
Preference number: 1 (lower is better)
Translates to: GSSPPFGQSPGGTSG*HQDLGPSLARAQHG
Trigger: CCCATGCTGGGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp TCCAGGCTCCAGCCCGCCCTTTGGCCAGAGCCCTGGAGGCACATCTaGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: SRLQPALWPEPWRHI*VASGSWTQSGPCPA
Trigger: TGCTGGGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAGCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp GCTGACAGGGGCTCCAGGCTCCAGCCCGCCCTTTGGCCAGAGCCCTaGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGC +
Preference number: 1 (lower is better)
Translates to: ADRGSRLQPALWPEP*RHIWVASGSWTQSG
Trigger: GCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAGCCTGGAGCCCCTGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp CCTCCTCCCTCCCAGGTGCCTCCAGCCCTCCTCCTCCAATCTGCCTaGCCAGAGCCCTGTGAAGCTCCCGCACTCGACTTCAGTGGCGTC +
Preference number: 1 (lower is better)
Translates to: PPPSQVPPALLLQSA*PEPCEAPALDFSGV
Trigger: GACGCCACTGAAGTCGAGTGCGGGAGCTTCACAGGGCTCTGGTCAGGCAGATTGGAGGAGGAGGGCTGGAGGCACCTGGGAGGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp CCACAGCCATTCTCCAACCTGTGGCATCGCCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTGAGTCGGGTGTCCCTGCCCACCAGG +
Preference number: 1 (lower is better)
Translates to: PQPFSNLWHRRLSGH*SLSRLLSRVSLPTR
Trigger: CCTGGTGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGGCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp GCTCCAGGGACTCGAGTCCACTCCACGGAGAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCC +
Preference number: 1 (lower is better)
Translates to: APGTRVHSTESLAQL*PACEYLGPAHPGFP
Trigger: GGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTGGACTCGAGTCCCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR TCA 90 bp TCGAGTCCACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTG +
Preference number: 1 (lower is better)
Translates to: SSPLHGEPCPAVASL*VSWPGTPWLSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTGGACTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR GCA 90 bp CCATTCTCCTGGCAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTaGCCGAGACTGGGGCAGCTGGGAGACCACCGGGTGGCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: PFSWQGLSQQAQKPS*PRLGQLGDHRVAAG
Trigger: CCCTGCAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTGCCAGGAGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp TCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGC +
Preference number: 1 (lower is better)
Translates to: SAASCCRRRCCAPAR*HPQAPHGSGAEGQR
Trigger: GCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 90 bp CTTTGGCCAGAGCCCTGGAGGCACATCTGGGTGGCATCAGGATCTTaGACCCAGTCTGGCCCGTGCCCAGCATGGGGCTGCTTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: LWPEPWRHIWVASGS*TQSGPCPAWGCFSS
Trigger: GGAGGAGAAGCAGCCCCATGCTGGGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp CCCGCAGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGAAGTCGCTG +
Preference number: 1 (lower is better)
Translates to: PAGSTWKWCRRAAQS*ALGMKTLWVRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR GCA 90 bp GTGGATACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: VDTVEEAPVVVRQLA*QVLGTHQVQPLSRA
Trigger: GGCTCTGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp GGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGATaGCTGCCTCCACACTGCCTGCTCCAGGGACTCGAGTCCACTCCA +
Preference number: 1 (lower is better)
Translates to: GSTPRSSLAASHHRG*LPPHCLLQGLESTP
Trigger: TGGAGTGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR CCA 90 bp GCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGTGGAGTCCCTaGAGCTTCCTGGGTGAGCTCTGCCTCGCAAGAGGCGTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: AARTQGNSKARGWSP*SFLGELCLARGVLA
Trigger: TGCCAGGACGCCTCTTGCGAGGCAGAGCTCACCCAGGAAGCTCCAGGGACTCCACCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp GCTCCAGCTCTCGGGAGAGGCGGGAGAGTTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTGGACTCC +
Preference number: 1 (lower is better)
Translates to: APALGRGGRVPAGCQ*PSAAGHKPRCWLDS
Trigger: GGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCGCCTCTCCCGAGAGCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 90 bp GGGTTGAATGAGGTGCAGCATCAGCACCTAGCGCAGTGCCCGGCCTaGGAGGGTGAGCCCACATCAGTTTCTGAGCGTCAGCCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: GLNEVQHQHLAQCPA*EGEPTSVSERQPRA
Trigger: GGCTCTTGGCTGACGCTCAGAAACTGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTGATGCTGCACCTCATTCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp CACAGGCCAGGGTTGAATGAGGTGCAGCATCAGCACCTAGCGCAGTaGCCGGCCTGCGAGGGTGAGCCCACATCAGTTTCTGAGCGTCAG +
Preference number: 1 (lower is better)
Translates to: HRPGLNEVQHQHLAQ*PACEGEPTSVSERQ
Trigger: CTGACGCTCAGAAACTGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTGATGCTGCACCTCATTCAACCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp CTGCCCACGAGGCCTCACTCCTTATCTACTCCAATGGCCCAACTATaGTCCTCCTCCTCCCTCCCAGGTGCCTCCAGCCCTCCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: LPTRPHSLSTPMAQL*SSSSLPGASSPPPP
Trigger: TGGAGGAGGAGGGCTGGAGGCACCTGGGAGGGAGGAGGAGGAGCATAGTTGGGCCATTGGAGTAGATAAGGAGTGAGGCCTCGTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp CCACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTaGCAGGGCAGCGCCTGCCAGGCAAGTCTCCTGACTCAGGTTCCC +
Preference number: 1 (lower is better)
Translates to: PQQGCSSWKPLSGLC*QGSACQASLLTQVP
Trigger: GGGAACCTGAGTCAGGAGACTTGCCTGGCAGGCGCTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp AAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGGAGACCACCGGGTaGCTGCAGGGTGGTCTGGACTGTAAAGCTGATGGTCCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: KSHPARDWGSWETTG*LQGGLDCKADGPRR
Trigger: CCTCCTTGGACCATCAGCTTTACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp TCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTaGGAGACCACCGGGTGGCTGCAGGGTGGTCTGGACTGTAAAGCT +
Preference number: 1 (lower is better)
Translates to: SPNRLKSHPARDWGS*ETTGWLQGGLDCKA
Trigger: AGCTTTACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp AGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACAGGGTCAGTGTaGAGCATGGAGCCATACAGGGCCACCCACTGGCTGACCAGCCGC +
Preference number: 1 (lower is better)
Translates to: RSESFWRKLVATGSV*SMEPYRATHWLTSR
Trigger: GCGGCTGGTCAGCCAGTGGGTGGCCCTGTATGGCTCCATGCTCCACACTGACCCTGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp ACCTGGTGGATACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: TWWILLKRLQSWSVS*PARSLALTRSSPSA
Trigger: TGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR TCA 90 bp AGCCCACATCAGTTTCTGAGCGTCAGCCAAGAGCCAGGCAGCATGTaGGCAAGGAGAAGCGGAGGTGGGGGCCCGCAGGAGGGAAGTCAA +
Preference number: 1 (lower is better)
Translates to: SPHQFLSVSQEPGSM*ARRSGGGGPQEGSQ
Trigger: TTGACTTCCCTCCTGCGGGCCCCCACCTCCGCTTCTCCTTGCTCACATGCTGCCTGGCTCTTGGCTGACGCTCAGAAACTGATGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp ATCTACTCCAATGGCCCAACTATGCTCCTCCTCCTCCCTCCCAGGTaGCTCCAGCCCTCCTCCTCCAATCTGCCTGACCAGAGCCCTGTG +
Preference number: 1 (lower is better)
Translates to: IYSNGPTMLLLLPPR*LQPSSSNLPDQSPV
Trigger: CACAGGGCTCTGGTCAGGCAGATTGGAGGAGGAGGGCTGGAGGCACCTGGGAGGGAGGAGGAGGAGCATAGTTGGGCCATTGGAGTAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp AGCCCACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTaGTGGCAGGGCAGCGCCTGCCAGGCAAGTCTCCTGACTCAGGTT +
Preference number: 1 (lower is better)
Translates to: SPQQGCSSWKPLSGL*WQGSACQASLLTQV
Trigger: AACCTGAGTCAGGAGACTTGCCTGGCAGGCGCTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp AAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCTaGAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGT +
Preference number: 1 (lower is better)
Translates to: KCRGAIPAASGRPRP*SLNTYSGVMPGAMS
Trigger: ACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp TGCAGGCCAATGGCATCACCTGCAGAATTGACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCCTCCTGGGCCAACGCTGCCATCACC +
Preference number: 1 (lower is better)
Translates to: CRPMASPAELTFTST*PLVQPSSWANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp ACTCTCGCTCCTCCAGGGATCCTCCTCCTGGGTTCCCTTTCCTCCTaGGTTTGCCCACCAGGAATCCTCTTCTTCCTCCACCCTTGCCCC +
Preference number: 1 (lower is better)
Translates to: TLAPPGILLLGSLSS*VCPPGILFFLHPCP
Trigger: GGGGCAAGGGTGGAGGAAGAAGAGGATTCCTGGTGGGCAAACCCAGGAGGAAAGGGAACCCAGGAGGAGGATCCCTGGAGGAGCGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp CGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATaGGGCCACCGTAACATGGAGCCTTTCCCCGCTTTTGGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: RLGSQGDRRQHKLPA*GHRNMEPFPAFGPP
Trigger: AGGAGGCCCAAAAGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp TGGATCAGCTCCACCTGGTGGATACTGTTGAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCC +
Preference number: 1 (lower is better)
Translates to: WISSTWWILLKRLQS*SVSWPARSLALTRS
Trigger: GGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp GACTGCTCCGAGCATGTGGAAATCCTCGCCACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTTCTGAGTGGTGAGAGAGGCACAGGG +
Preference number: 1 (lower is better)
Translates to: DCSEHVEILATWLSS*RWETRLLSGERGTG
Trigger: CCCTGTGCCTCTCTCACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 90 bp CTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCTTCGCCTaGGGAGGAGAAGAAGCCAGTAAGAGTCTCCAGCAGGCAGGGGCT +
Preference number: 1 (lower is better)
Translates to: LRDKCKGPEGRTGFA*GGEEASKSLQQAGA
Trigger: AGCCCCTGCCTGCTGGAGACTCTTACTGGCTTCTTCTCCTCCGCAGGCGAAGCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp TGCCAGGCAGAGCCAGAGAAAGACCCTTCCAGGCTAAGGGATAAGTaGAAAGGCCCTGAGGGGAGAACGGGCTTCGCCTGCGGAGGAGAA +
Preference number: 1 (lower is better)
Translates to: CQAEPEKDPSRLRDK*KGPEGRTGFACGGE
Trigger: TTCTCCTCCGCAGGCGAAGCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTTCTCTGGCTCTGCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp TGTATCCACATCCATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTaGCTCTGGACGCCCAAGGCCCTGCAGCCTCAATACCTACTCAGG +
Preference number: 1 (lower is better)
Translates to: CIHIHGAEVQRGHTS*LWTPKALQPQYLLR
Trigger: CCTGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCATGGATGTGGATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp CACATCCATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTaGACGCCCAAGGCCCTGCAGCCTCAATACCTACTCAGGAGTCAT +
Preference number: 1 (lower is better)
Translates to: HIHGAEVQRGHTSCL*TPKALQPQYLLRSH
Trigger: ATGACTCCTGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCATGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp ACCAGAGGAGAAATGCTGGTGGAGGACACCGGCCCCCGTGGCACTTaGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGAA +
Preference number: 1 (lower is better)
Translates to: TRGEMLVEDTGPRGT*FLLCRWAGLTLESE
Trigger: TTCAGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp AGATGTGACCAGAGGAGAAATGCTGGTGGAGGACACCGGCCCCCGTaGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGA +
Preference number: 1 (lower is better)
Translates to: RCDQRRNAGGGHRPP*HLVSVVSLGWAHPR
Trigger: TCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTCTGGTCACATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp CAACTTGGATGGCACAGCTGCTGCCAGGAAGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGTTCCGGGCCTTCATCTGAGGAGATG +
Preference number: 1 (lower is better)
Translates to: QLGWHSCCQEGARPG*GAKQASSGPSSEEM
Trigger: CATCTCCTCAGATGAAGGCCCGGAACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp TCCGAGCATGTGGAAATCCTCGCCACCTGGCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGTGGTGAGAGAGGCACAGGGTTGTGG +
Preference number: 1 (lower is better)
Translates to: SEHVEILATWLSSWR*ETRLLSGERGTGLW
Trigger: CCACAACCCTGTGCCTCTCTCACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTCCACATGCTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR TCA 90 bp GATAGGGAGACGGGAGGGGGCCTGTCTGGGAACCCAGCATTTGGCTaGGATGAGAACGAGAAGGATCCTGCCAGGCAGAGCCAGAGAAAG +
Preference number: 1 (lower is better)
Translates to: DRETGGGLSGNPAFG*DENEKDPARQSQRK
Trigger: CTTTCTCTGGCTCTGCCTGGCAGGATCCTTCTCGTTCTCATCTCAGCCAAATGCTGGGTTCCCAGACAGGCCCCCTCCCGTCTCCCTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 90 bp AAAGCCCCCGGACTCCTGACTCACCCAGGCTTGAGCCTCCTGTCCTaGTTGCTCAGTTCCAGATGCTTCCGTGCTTCTCCTGTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: KAPGLLTHPGLSLLS*LLSSRCFRASPVSP
Trigger: TGGGGACACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAATCAGGACAGGAGGCTCAAGCCTGGGTGAGTCAGGAGTCCGGGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp TCCTCCTGGGTTTGCCCACCAGGAATCCTCTTCTTCCTCCACCCTTaGCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACAC +
Preference number: 1 (lower is better)
Translates to: SSWVCPPGILFFLHP*PLQLSTPVVAYTGH
Trigger: GTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGGCAAGGGTGGAGGAAGAAGAGGATTCCTGGTGGGCAAACCCAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp GATGCTTCCGTGCTTCTCCTGTGTCCCCACCCACGGCAAGGGAACTaGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: DASVLLLCPHPRQGN*FGYHCHLLHLSLSL
Trigger: GAGGGAGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTGGGTGGGGACACAGGAGAAGCACGGAAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp TGGCTGGCTGGCTTTTGCCGAGACACCAGCAGACAATGGGTTGGATaGAAAGAAAGCCCCCGGACTCCTGACTCACCCAGGCTTGAGCCT +
Preference number: 1 (lower is better)
Translates to: WLAGFCRDTSRQWVG*KESPRTPDSPRLEP
Trigger: AGGCTCAAGCCTGGGTGAGTCAGGAGTCCGGGGGCTTTCTTTTCATCCAACCCATTGTCTGCTGGTGTCTCGGCAAAAGCCAGCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp CTTCTGAGTGGTGAGAGAGGCACAGGGTTGTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTGGCCATCATTCTCATCTTCTCAAAG +
Preference number: 1 (lower is better)
Translates to: LLSGERGTGLWLRQW*SIRAALAIILIFSK
Trigger: CTTTGAGAAGATGAGAATGATGGCCAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTCACCACTCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 90 bp GTTGTCAATGACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGACTGCTCCGAGCATGTGGAAATCCT +
Preference number: 1 (lower is better)
Translates to: VVNDLQLLDISPGAG*TPGAQGLLRACGNP
Trigger: AGGATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 90 bp AGAGGCACAGAATCTGGAAGACATCTGGTGTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGG +
Preference number: 1 (lower is better)
Translates to: RGTESGRHLVWRPLY*TQRPSALHSPPTPG
Trigger: CCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCCAGATTCTGTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp AGGCTTGAGCCTCCTGTCCTGATTGCTCAGTTCCAGATGCTTCCGTaGTTCTCCTGTGTCCCCACCCACGGCAAGGGAACTGGTTTGGTT +
Preference number: 1 (lower is better)
Translates to: RLEPPVLIAQFQMLP*FSCVPTHGKGTGLV
Trigger: AACCAAACCAGTTCCCTTGCCGTGGGTGGGGACACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAATCAGGACAGGAGGCTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp GAGAAGCGGAGGTGGGGGCCCGCAGGAGGGAAGTCAACTCTCCAGTaGGATGGGAGAGATACCAAAGGACAGAAAGCAAGTAGGCAAAGA +
Preference number: 1 (lower is better)
Translates to: EKRRWGPAGGKSTLQ*DGRDTKGQKASRQR
Trigger: TCTTTGCCTACTTGCTTTCTGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGCCCCCACCTCCGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp CCTGGCTGGACAACAAAGCCAGAGGCACAGAATCTGGAAGACATCTaGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCC +
Preference number: 1 (lower is better)
Translates to: PGWTTKPEAQNLEDI*CGDLSIAHNVPAHS
Trigger: GGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCCAGATTCTGTGCCTCTGGCTTTGTTGTCCAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp TCCTTGATGATACGGTTGAAGTCCTGCTTGTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGGATGATGGTGGCTGCCCGGGGTGCA +
Preference number: 1 (lower is better)
Translates to: SLMIRLKSCLSTRRK*QLSSRRMMVAARGA
Trigger: TGCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR GCA 90 bp TGGCCCAACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTaGAGTTGGGAAGAAGCTGTCAGTTGCATCTGGACTGTAAAGTCC +
Preference number: 1 (lower is better)
Translates to: WPNRPGRAQVWKSGD*SWEEAVSCIWTVKS
Trigger: GGACTTTACAGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp CCCCTGCAGAGTTCCTTACTGCCTCATGTGTCGCCTGCACATGGGTaGTTCCCAAAACTACCAGCAGTGCTGAACTCTCTTCCAAACCCT +
Preference number: 1 (lower is better)
Translates to: PLQSSLLPHVSPAHG*FPKLPAVLNSLPNP
Trigger: AGGGTTTGGAAGAGAGTTCAGCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp GAAATGACAGTTGTCTTCTCGCAGGATGATGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAGCTGTCCAAAATCATCTCCCTCATG +
Preference number: 1 (lower is better)
Translates to: EMTVVFSQDDGGCPG*IIHQSQLSKIISLM
Trigger: CATGAGGGAGATGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 90 bp GGGACCCCTGCAGAGTTCCTTACTGCCTCATGTGTCGCCTGCACATaGGTGATTCCCAAAACTACCAGCAGTGCTGAACTCTCTTCCAAA +
Preference number: 1 (lower is better)
Translates to: GTPAEFLTASCVACT*VIPKTTSSAELSSK
Trigger: TTTGGAAGAGAGTTCAGCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp CTGGACAACAAAGCCAGAGGCACAGAATCTGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCT +
Preference number: 1 (lower is better)
Translates to: LDNKARGTESGRHLV*RPLYCTQRPSALHS
Trigger: AGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCCAGATTCTGTGCCTCTGGCTTTGTTGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 90 bp TTCCTAGGGGAAGTGCTGAAGGGGCAGGGAAGAGAGGACTTCGTATaGCCAGAGCTTGCTGGGACCATTCTCAACACTGATGATAAACCC +
Preference number: 1 (lower is better)
Translates to: FLGEVLKGQGREDFV*PELAGTILNTDDKP
Trigger: GGGTTTATCATCAGTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGAAGTCCTCTCTTCCCTGCCCCTTCAGCACTTCCCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp TTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTaGCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAG +
Preference number: 1 (lower is better)
Translates to: FPTFPNLRDPCRVPY*LMCRLHMGDSQNYQ
Trigger: CTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp CTCAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTaGAGAGTTCCTTACTGCCTCATGTGTCGCCTGCACATGGGTGAT +
Preference number: 1 (lower is better)
Translates to: LNPLLFPTFPNLRDP*RVPYCLMCRLHMGD
Trigger: ATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 90 bp CACATGCAGCCTCTCTCTCTCTCTCTGTCCACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACAAAGCCAGAGGCACAGAATCTGGAA +
Preference number: 1 (lower is better)
Translates to: HMQPLSLSLSTVKIN*RPGWTTKPEAQNLE
Trigger: TTCCAGATTCTGTGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGTGGACAGAGAGAGAGAGAGAGGCTGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp GCCTCTCTCTCTCTCTCTGTCCACTGTGAAAATAAACTGCAGGCCTaGCTGGACAACAAAGCCAGAGGCACAGAATCTGGAAGACATCTG +
Preference number: 1 (lower is better)
Translates to: ASLSLSVHCENKLQA*LDNKARGTESGRHL
Trigger: CAGATGTCTTCCAGATTCTGTGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGTGGACAGAGAGAGAGAGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGCATCTGGACTGTAAAGTCCTATTGG +
Preference number: 1 (lower is better)
Translates to: NRPGRAQVWKSGDCS*EEAVSCIWTVKSYW
Trigger: CCAATAGGACTTTACAGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp GACAGAAAGCAAGTAGGCAAAGAAAACAACTCCACATGGCGAGAGTaGTTTGAAGAAAATCACAGAGGACACCAAGGCAGAGCGTGGTGG +
Preference number: 1 (lower is better)
Translates to: DRKQVGKENNSTWRE*FEENHRGHQGRAWW
Trigger: CCACCACGCTCTGCCTTGGTGTCCTCTGTGATTTTCTTCAAAGCACTCTCGCCATGTGGAGTTGTTTTCTTTGCCTACTTGCTTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 90 bp TCTCTTCCAAACCCTGGTCTCAAAAACCCCCTGCATCCTTCCACATaGATGATCCATTACCTCACACTCCATATACCCATCGGATCCTTG +
Preference number: 1 (lower is better)
Translates to: SLPNPGLKNPLHPST*MIHYLTLHIPIGSL
Trigger: CAAGGATCCGATGGGTATATGGAGTGTGAGGTAATGGATCATTCATGTGGAAGGATGCAGGGGGTTTTTGAGACCAGGGTTTGGAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp ATACCAAAGGACAGAAAGCAAGTAGGCAAAGAAAACAACTCCACATaGCGAGAGTGCTTTGAAGAAAATCACAGAGGACACCAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: IPKDRKQVGKENNST*RECFEENHRGHQGR
Trigger: TCTGCCTTGGTGTCCTCTGTGATTTTCTTCAAAGCACTCTCGCCATGTGGAGTTGTTTTCTTTGCCTACTTGCTTTCTGTCCTTTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 90 bp TTGTCACTAAGCGCTGTATGGCGTTTATCATACCTGGCTTACAGGTaGAGAAATGAAGGAAGAGAACTGTTCACTGACTTGCTCAGATTC +
Preference number: 1 (lower is better)
Translates to: LSLSAVWRLSYLAYR*RNEGRELFTDLLRF
Trigger: GAATCTGAGCAAGTCAGTGAACAGTTCTCTTCCTTCATTTCTCCACCTGTAAGCCAGGTATGATAAACGCCATACAGCGCTTAGTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 90 bp AGAGGCAGGAGCTACAGTTTTATGTGTTTGTCACTAAGCGCTGTATaGCGTTTATCATACCTGGCTTACAGGTGGAGAAATGAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: RGRSYSFMCLSLSAV*RLSYLAYRWRNEGR
Trigger: TCTTCCTTCATTTCTCCACCTGTAAGCCAGGTATGATAAACGCCATACAGCGCTTAGTGACAAACACATAAAACTGTAGCTCCTGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 90 bp CCTGTCTACCCTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTaGCTGTGCCTCAGTTTCTTTGACTGTAAAACCAGAGTAAAAATA +
Preference number: 1 (lower is better)
Translates to: PVYPAIKQLCDLGQT*LCLSFFDCKTRVKI
Trigger: TATTTTTACTCTGGTTTTACAGTCAAAGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAGGGTAGACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR-3UTR TCA 90 bp CTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCCGCGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: LLPLVADVGAALLLAATREGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GCGGGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCCCCTCTGTCCTGTCCTaGCCGGTAGGACACACACGC +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSPSVLS*PVGHTR
Trigger: GCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGG...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCCACCAGGAGCCCCGTaGGCCTCAGGGGCCAACTCC +
Preference number: 2 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSPPGAP*ASGANS
Trigger: GGAGTTGGCCCCTGAGGCCCACGGGGCTCCTGGTGG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCCCACGGCTGGCTGGCTaGCTTTTGCCGAGACACCAG +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSPRLAG*LLPRHQ
Trigger: CTGGTGTCTCGGCAAAAGCCAGCCAGCCAGCCGTGG...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 2 (lower is better)
Translates to: SWSVSWPARSLALTRSSPVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 90 bp CCACACTGCCTGCTCCAGGGACTCGAGTCCACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACC +
Preference number: 2 (lower is better)
Translates to: PHCLLQGLESTPRRA*PSCGQPVSILARHT
Trigger: GGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTGGACTCGAGTCCCTGGAGCAGGCAGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR TCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: RSAASCCRRRCCAPARCHEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: HSTESLAQLWPACEYLGPPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: PGGTSGWHQDLGPSLARAWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp AGTCCCAGCCCCTCCTCATGGCTCCAGCTCTCGGGAGAGGCGGGAGAGTTCCCGGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 2 (lower is better)
Translates to: SPSPSSWLQLSGEAGEFPGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...CGGGAACTCTCCCGCCTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 90 bp CCTTTGGCCAGAGCCCTGGAGGCACATCTGGGTGGCATCAGGATCTaGGACCCAGTCTGGCCCGTGCCCAGCATGGGGCTGCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: PLARALEAHLGGIRI*DPVWPVPSMGLLLL
Trigger: GAGGAGAAGCAGCCCCATGCTGGGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCTCCATGGGGCTGAAGTaGAGAGGGGCCATACCAGCT +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSSMGLK*RGAIPA
Trigger: AGCTGGTATGGCCCCTCTGCACTTCAGCCCCATGGA...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCCTGCCACGCCCACTCTaGGCTGGCCTGGAACATACT +
Preference number: 2 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPLPRPL*AGLEHT
Trigger: AGTATGTTCCAGGCCAGCCCAGAGTGGGCGTGGCAG...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGCTCCAGCCCGCCCTTTaGCCAGAGCCCTGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLLQPAL*PEPWRH
Trigger: GTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAG...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCGAGACTGGGGCAGCTaGGAGACCACCGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWRDWGS*ETTGWL
Trigger: CAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCTCCTCTTGCCTGCCCTaGGCACCATTCTCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSSSCLP*APFSWQ
Trigger: TTGCCAGGAGAATGGTGCCCAGGGCAGGCAAGAGGA...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCTCTGGGAGTGGCCTaGCCCCCTGGGCCGCAACTC +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTPLGVA*PPGPQL
Trigger: GAGTTGCGGCCCAGGGGGCCAGGCCACTCCCAGAGG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCAGACTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: RQLACQVLGTHQVQPLSRLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...TCTGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 90 bp ACGGGGCAGAGACACAGCTCGGTGGCCACCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGCTCCAGGTTGGCGGTGGTGACATCC +
Preference number: 2 (lower is better)
Translates to: TGQRHSSVATQYCSS*KRRMKRSRLAVVTS
Trigger: GGATGTCACCACCGCCAACCTGGAGCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCTGCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR TCA 90 bp ACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 2 (lower is better)
Translates to: TVEEAPVVVRQLACQVLGAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...GCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR TCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGACCACCACGGGGAGCTaGTGGTCACCCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLTTTGS*WSPWLA
Trigger: AGCCAGCCAGGGTGACCATCAGCTCCCCGTGGTGGT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGCCCAGGCCAAGGCCCTaGCCTTGCCACACACGGTAC +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLPRPRP*PCHTRY
Trigger: GTACCGTGTGTGGCAAGGGCAGGGCCTTGGCCTGGG...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTACCCAGTCTGGCCCGTaGCCAGCATGGGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPATQSGP*PAWGCF
Trigger: GAAGCAGCCCCATGCTGGGCACGGGCCAGACTGGGT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCAACTGAGGCGAGGCTaGCCCCCTACCAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESQLRRG*PPTRPG
Trigger: TCCAGGCCTGGTAGGGGGGCAGCCTCGCCTCAGTTG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCAGACAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 2 (lower is better)
Translates to: RQLACQVLGTHQVQPLSRQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...TCTGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp TGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: WKWCRRAAQSWALGMKTLLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...CAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp GCCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACCTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 2 (lower is better)
Translates to: APEMWPHHGHLAAGQWHHLGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...GTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGGCCCGTGCCCAGCATaGGGCTGCTTCTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLGPCPA*GCFSST
Trigger: TGTGGAGGAGAAGCAGCCCCATGCTGGGCACGGGCC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAAGAGGGTGGAGTCCCTaGAGCTTCCTGGGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPARGWSP*SFLGEL
Trigger: GAGCTCACCCAGGAAGCTCCAGGGACTCCACCCTCT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGGACACCGGCCCCCGTaGCACTTGGTTTCTGTTGTG +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPAGHRPP*HLVSVV
Trigger: CACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 2 (lower is better)
Translates to: QEGRAWRGPVGIPGGSMRQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...CCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
3UTR CAA 90 bp GCCCCCTGGGCCGCAACTCTTCTAGCTCCCAGAGTCTGTGTCCTCTaGCCTGCCCTGGGCACCATTCTCCTGGCAAGGTCTCTCCCAACA +
Preference number: 2 (lower is better)
Translates to: APWAATLLAPRVCVL*PALGTILLARSLPT
Trigger: TGTTGGGAGAGACCTTGCCAGGAGAATGGTGCCCAGGGCAGGCAAGAGGACACAGACTCTGGGAGCTAGAAGAGTTGCGGCCCAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 2 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp CAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 2 (lower is better)
Translates to: QDLLPLVADVGAALLLAACLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR TCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: RSAASCCRRRCCAPARCHVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCACTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTCAATGACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTGGACTCCGGGTCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: VNDLQLLDISPGAGWTPGLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...ACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp TGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: WKWCRRAAQSWALGMKTLCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...CAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCCAGGCCAAGGCCCTaGCCTTGCCACACACGGTAC +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTPRPRP*PCHTRY
Trigger: GTACCGTGTGTGGCAAGGGCAGGGCCTTGGCCTGGG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGGGGCCATACCAGCTaGCTCTGGACGCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTRGHTS*LWTPKA
Trigger: GGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACTGTGTCCTCTTGCCTaGCCTGGGCACCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPALCPLA*PGHHSP
Trigger: AGGAGAATGGTGCCCAGGGCAGGCAAGAGGACACAG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RSAASCCRRRCCAPARCHGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp CAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: QDLLPLVADVGAALLLAAGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...GGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCGGACACACAGTAGGGTaGGACCATGGGGAGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSGHTVG*DHGEPA
Trigger: AGCAGGCTCCCCATGGTCCCACCCTACTGTGTGTCC...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCAAGGCAGAGCGTGGTaGGAGAAAGGGGAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSQGRAW*EKGEGA
Trigger: AGCACCCTCCCCTTTCTCCCACCACGCTCTGCCTTG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 2 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCATACCAGCTGCCTCTaGACGCCCAAGGCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGHTSCL*TPKALQ
Trigger: CTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGAGGAGAAATGCTGGTaGAGGACACCGGCCCCCGTG +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLEEKCW*RTPAPV
Trigger: CACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGTGGCCTGGCCCCCTaGGCCGCAACTCTTCTAGCT +
Preference number: 2 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPASGLAP*AATLLA
Trigger: AGCTAGAAGAGTTGCGGCCCAGGGGGCCAGGCCACT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 90 bp CTCCGGATAGGGAGACGGGAGGGGGCCTGTCTGGGAACCCAGCATTaGGCTGAGATGAGAACGAGAAGGATCCTGCCAGGCAGAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LRIGRREGACLGTQH*AEMRTRRILPGRAR
Trigger: TCTGGCTCTGCCTGGCAGGATCCTTCTCGTTCTCATCTCAGCCAAATGCTGGGTTCCCAGACAGGCCCCCTCCCGTCTCCCTATCCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR TCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACCCTTTAAGCCCCAGCTaGGAATGGCCTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: SWLFPSRFQERTTVGRADPLSPS*EWPGAP
Trigger: GGGGGCCCCAGGCCATTCTCAGCTGGGGCTTAAAGG...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR TCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 2 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 2 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGGCCCGCAGCCCCACTaGCTGCTGTTGGAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPGPQPH*LLLEES
Trigger: GCTTTCTTCCAACAGCAGGCAGTGGGGCTGCGGGCC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACCACTGCCATCTGCTaGACCTCAGTCTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPATTAIC*TSVSPS
Trigger: TGAGGGAGAGACTGAGGTGCAGCAGATGGCAGTGGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGACCACCGGGTGGCTaGAGGGTGGTCTGGACTGTA +
Preference number: 2 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPARPPGG*RVVWTV
Trigger: TACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 2 (lower is better)
Translates to: WCRRAAQSWALGMKTLWVKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGGCCCGTGCCCAGCATaGGGCTGCTTCTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQGPCPA*GCFSST
Trigger: TGTGGAGGAGAAGCAGCCCCATGCTGGGCACGGGCC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGC +
Preference number: 2 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPSGDCS*EEAVSC
Trigger: GCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCT...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: IQGHPLADQPQDLLPLVAIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp AGGCTGTCACAGGCAGCTGCAGGGTCAACACTGAGTGGTCTGGCCGGCAGATGTGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 2 (lower is better)
Translates to: RLSQAAAGSTLSGLAGRCVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...ACATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR TCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGGAGCCAGGCAGCATGTaGGCAAGGAGAAGCGGAGGT +
Preference number: 2 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQEPGSM*ARRSGG
Trigger: ACCTCCGCTTCTCCTTGCTCACATGCTGCCTGGCTC...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR TCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTGCCCACATCAGTTTCTaGGCGTCAGCCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPAHISF*ASAKSQ
Trigger: CTGGCTCTTGGCTGACGCTCAGAAACTGATGTGGGC...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR TCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGGCTCACCCTAGAGTCTaGAGAACGGTGAAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWAHPRV*RTVKGH
Trigger: GTGGCCCTTCACCGTTCTTCAGACTCTAGGGTGAGC...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATGGACCATGGGGAGCCTaGTGGATGGTGAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNGPWGA*WMVRPL
Trigger: CAGGGGCCTCACCATCCAGCAGGCTCCCCATGGTCC...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCCAGCACCTAGCGCAGTaGCCGGCCTGCGAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTQHLAQ*PACEGE
Trigger: CTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTG...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCATTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 2 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 2 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPAWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGACCACCGGGTGGCTaGAGGGTGGTCTGGACTGTA +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTRPPGG*RVVWTV
Trigger: TACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTGTGGGTTGACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: LWVDNKETLIEPQRCGHTWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...GGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGTCAACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 2 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACA +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSGRHLV*RPLYCT
Trigger: TGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGTGGCATCAGGATCTTaGACCCAGTCTGGCCCGTGC +
Preference number: 2 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPVASGS*TQSGPC
Trigger: GCACGGGCCAGACTGGGTCCAAGATCCTGATGCCAC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTCCTCTTGCCTGCCCTaGGCACCATTCTCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWSSCLP*APFSWQ
Trigger: TTGCCAGGAGAATGGTGCCCAGGGCAGGCAAGAGGA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp AGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: RRAAQSWALGMKTLWVRRLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...CCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp ATCCTCGCCACCTGGCTGTCCTCGTGGAGGTGGGAAACTCGGCTTCTGAGTGGTACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 2 (lower is better)
Translates to: ILATWLSSWRWETRLLSGTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...ACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp ACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 2 (lower is better)
Translates to: TVEEAPVVVRQLACQVLGRVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...GCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 90 bp TGTTGGGCCTCAACAAGCGACGGGCTCTCCGCGGAAGCTTCAGCATaGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: CWASTSDGLSAEASA*FLSQATPRRPQKPG
Trigger: GCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCGGAGAGCCCGTCGCTTGTTGAGGCCCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR TCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACAACTGCTCTGCCCCTTaGCTGACTGCAGCCCCACAG +
Preference number: 2 (lower is better)
Translates to: SWLFPSRFQERTTVGRADNCSAP*LTAAPQ
Trigger: CTGTGGGGCTGCAGTCAGGCAAGGGGCAGAGCAGTT...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACA +
Preference number: 2 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSTVKIN*RPGWTT
Trigger: TGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGT...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCACGCAGCCCCACTGCCTaGTGTTGGAAGAAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPRSPTA*CWKKAV
Trigger: CACAGCTTTCTTCCAACAGCAGGCAGTGGGGCTGCG...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACCGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 2 (lower is better)
Translates to: PQRCGHTTGIWLQANGITGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...GGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp CAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: QDLLPLVADVGAALLLAASTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...GGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp CAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 2 (lower is better)
Translates to: QEGRAWRGPVGIPGGSMRCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...CCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTGGTTCCCTTTCCTCCTaGGTTTGCCCACCAGGAATC +
Preference number: 2 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPGSLSS*VCPPGI
Trigger: GATTCCTGGTGGGCAAACCCAGGAGGAAAGGGAACC...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAATGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 2 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 2 (lower is better)
Translates to: ARQVPPAARTQGNSKARGSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 2 (lower is better)
Translates to: QDLLPLVADVGAALLLAASLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...GGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGAACTGCAGGCCTGGCTaGACAACAAAGCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ARQVPPAARTQGNSKARGNCRPG*TTKPEA
Trigger: TGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTT...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTTTCTGTTGTGTCGCTaGGCTGGGCTCACCCTAGAG +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWFLLCR*AGLTLE
Trigger: CTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp AGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGAAGTCGCTATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 2 (lower is better)
Translates to: SAELGAGHEDPVGQEEVAMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...AGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 2 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 2 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 90 bp TCCCTGCCACGCCCACTCTGGGCTGGCCTGGAACATACTACTATGTaGACAGTAACAATAAAGCTCCTCAGGGACCACCGCACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: SLPRPLWAGLEHTTM*TVTIKLLRDHRTGP
Trigger: CGGGCCTGTGCGGTGGTCCCTGAGGAGCTTTATTGTTACTGTCAACATAGTAGTATGTTCCAGGCCAGCCCAGAGTGGGCGTGGCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 2 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp AGTTCCGGGCCTTCATCTGAGGAGATGCATTCCCACAGCCATTCTCCAACCTGTTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 2 (lower is better)
Translates to: SSGPSSEEMHSHSHSPTCCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...ACAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCAGTGTCCCGTGTCACTaGACATCACGGGTTGTTGAA +
Preference number: 2 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSSVPCH*TSRVVE
Trigger: TTCAACAACCCGTGATGTGCAGTGACACGGGACACT...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR GCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTGGCCCGCAGCCCCACTaGCTGCTGTTGGAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSGPQPH*LLLEES
Trigger: GCTTTCTTCCAACAGCAGGCAGTGGGGCTGCGGGCC...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCATCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: IQGHPLADQPQDLLPLVASTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp ACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 2 (lower is better)
Translates to: TVEEAPVVVRQLACQVLGANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...GCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 2 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGC +
Preference number: 2 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESSGDCS*EEAVSC
Trigger: GCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCT...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGACGAGCTCAAGTGTaGAAAAGCGGGGATTGCAGT +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGRAQV*KSGDCS
Trigger: ACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGAAGATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 2 (lower is better)
Translates to: CLCWVMSTGIWSHGLQQKIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...CTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CAA 90 bp CAGAGGCACAGAATCTGGAAGACATCTGGTGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGG +
Preference number: 2 (lower is better)
Translates to: QRHRIWKTSGVETSL*HTTSQRTPLSTHSW
Trigger: CCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCCAGATTCTGTGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATCACATCACGGGTTGTTaGACTGCTCTGCCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNHITGC*TALPLA
Trigger: GGCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTG...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCATTCACTTAGTGACCTaGGGTCTAAGCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGIHLVT*GLSPAV
Trigger: CACAGCTGGGCTTAGACCTCAGGTCACTAAGTGAAT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR TCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGAGACAATGGGTTGGATaGAAAGAAAGCCCCCGGACT +
Preference number: 2 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWRQWVG*KESPRT
Trigger: AGTCCGGGGGCTTTCTTTTCATCCAACCCATTGTCT...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCAACCAAATCCTGGCTaGAGTCACATCTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSQPNPG*SHIFSS
Trigger: GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTGGAAAAGCGGGGATTaGAGTTGGGAAGAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGWKSGD*SWEEAV
Trigger: GACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: DLLPLVADVGAALLLAATIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 2 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGTTGGAAGAAAGCTGTaGAAAGAAAGCAGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPVGRKL*KESRGP
Trigger: GGGCCCCCTGCTTTCTTTCCACAGCTTTCTTCCAAC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGCCCACTGCCTGCTGTTaGAAGAAAGCTGTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: ARQVPPAARTQGNSKARGPTACC*KKAVER
Trigger: TCTTTCCACAGCTTTCTTCCAACAGCAGGCAGTGGG...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTACGCCCACTCTGGGCTaGCCTGGAACATACTACTAT +
Preference number: 2 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPTPTLG*PGTYYY
Trigger: ATAGTAGTATGTTCCAGGCCAGCCCAGAGTGGGCGT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGCAGCAGACAATGGGTTaGATGAAAAGAAAGCCCCCG +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLQQTMG*MKRKPP
Trigger: CGGGGGCTTTCTTTTCATCCAACCCATTGTCTGCTG...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 2 (lower is better)
Translates to: LADQPQDLLPLVADVGAAWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...CGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR TCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACTGATGATAAACCCTaGTTTCCTGGAAGTCTGTTG +
Preference number: 2 (lower is better)
Translates to: STESLAQLWPACEYLGPATDDKP*FPGSLL
Trigger: CAACAGACTTCCAGGAAATCAGGGTTTATCATCAGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGGATTTTATTCCCAGTaGAGCCCTCCCCACCACCAA +
Preference number: 2 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGGFYSQ*SPPHHQ
Trigger: TTGGTGGTGGGGAGGGCTGCACTGGGAATAAAATCC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGGTTTGGTTACCACTaGCATCTGCTGCACCTCAGT +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTWFGYH*HLLHLS
Trigger: ACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp ATCCTCGCCACCTGGCTGTCCTCGTGGAGGTGGGAAACTCGGCTTCTGAGTGGTATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: ILATWLSSWRWETRLLSGIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...ACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 2 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGTTGGAAGAAAGCTGTaGAAAGAAAGCAGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQVGRKL*KESRGP
Trigger: GGGCCCCCTGCTTTCTTTCCACAGCTTTCTTCCAAC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTAGCAAGGCAAGAGGGTaGAGTCCCTGGAGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSSKARG*SPWSFL
Trigger: CAGGAAGCTCCAGGGACTCCACCCTCTTGCCTTGCT...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTCATCCTGCCCGAGACTaGGGCAGCTGGGAGACCACC +
Preference number: 2 (lower is better)
Translates to: LLLSSYVTLGKPACASVSHPARD*GSWETT
Trigger: GGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATG...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR-3UTR TCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAGGCCTCGCCTTCCTCTaGGCTCCCACAGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRGLAFL*APTALA
Trigger: GGCCAGTGCTGTGGGAGCTCAGAGGAAGGCGAGGCC...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTGCGCAGTGCCCGGCCTaGGAGGGTGAGCCCACATCA +
Preference number: 2 (lower is better)
Translates to: AGESPGSLADLFKTQIRLAQCPA*EGEPTS
Trigger: TGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGC...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACA +
Preference number: 2 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPATVKIN*RPGWTT
Trigger: TGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp GTTGACAGATCCCTTCCAGATAATGTACCACGAAGTGCCCTTGTCCCCCTGGCTAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 2 (lower is better)
Translates to: VDRSLPDNVPRSALVPLAKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...AGCCAGGGGGACAAGGGCACTTCGTGGTACATTATCTGGAAGGGATCTGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCCGCACTCGACTTCAGTaGCGTCCATTGTCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTRTRLQ*RPLSAG
Trigger: TCCAGCAGACAATGGACGCCACTGAAGTCGAGTGCG...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAATAAACTGCAGGCCTaGCTGGACAACAAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTNKLQA*LDNKAR
Trigger: TCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGCTGTCAGTTGCATCTaGACTGTAAAGTCCTATTGG +
Preference number: 2 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGAVSCI*TVKSYW
Trigger: CCAATAGGACTTTACAGTCCAGATGCAACTGACAGC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTTCCTGGAAGTCTGTTaGGCCTCAACAAGCGACGGG +
Preference number: 2 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSFLEVC*ASTSDG
Trigger: CCCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCGTATGACCAGAGCTTaGTGGGACCATTCTCAACAC +
Preference number: 2 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSRMTRA*WDHSQH
Trigger: GTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACG...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 2 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCGGAGCGGACTACAGTTaGAAGAGCCGACTCCAGTGC +
Preference number: 2 (lower is better)
Translates to: QSIALPYISKSQGPLQSSGADYS*KSRLQC
Trigger: GCACTGGAGTCGGCTCTTCCAACTGTAGTCCGCTCC...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 2 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGAATAAACTGCAGGCCTaGCTGGACAACAAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQNKLQA*LDNKAR
Trigger: TCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTAGAGGGTGGAGTCCCTaGAGCTTCCTGGGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLLSSYVTLGKPACASVSRGWSP*SFLGEL
Trigger: GAGCTCACCCAGGAAGCTCCAGGGACTCCACCCTCT...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGTACCTGGCTTACAGGTaGAGAAATGAAGGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLYLAYR*RNEGRE
Trigger: TTCTCTTCCTTCATTTCTCCACCTGTAAGCCAGGTA...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 90 bp CCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGACCTCAATCCATaGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: PALRIADPPGSDLNP*LFPTFPNLRDPCRV
Trigger: AACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTGAGGTCCGAACCTGGAGGATCTGCTATACGCAGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCCACGGGTTGTTGAACTaGTCTGCCCCTTGCCTGACT +
Preference number: 2 (lower is better)
Translates to: QSIALPYISKSQGPLQSSHGLLN*SAPCLT
Trigger: AGTCAGGCAAGGGGCAGAGCAGTTCAACAACCCGTG...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 2 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR GCA 90 bp TTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 2 (lower is better)
Translates to: FAMFFQPHGLCLHILDDTAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...CGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp GGAATGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 2 (lower is better)
Translates to: GMSLLGHEHWNLVPWPPTGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...TGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR GCA 90 bp CCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 2 (lower is better)
Translates to: PPTEALGSSLGCQTSLYTATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 2 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTAATCTGGAAGACATCTaGTGTGGAGACCTCTCTATT +
Preference number: 2 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPNLEDI*CGDLSI
Trigger: AATAGAGAGGTCTCCACACCAGATGTCTTCCAGATT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTACACCACCCCACGCTTaGGCAGTCAGGGAGACAGAA +
Preference number: 2 (lower is better)
Translates to: LLLSSYVTLGKPACASVSTPPHA*AVRETE
Trigger: TTCTGTCTCCCTGACTGCCCAAGCGTGGGGTGGTGT...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR CAA 90 bp CAACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTaGGGAAGAAGCTGTCAGTTGCATCTGGACTGTAAAGTCCTATTG +
Preference number: 2 (lower is better)
Translates to: QQARTSSSVEKRGLQ*GRSCQLHLDCKVLL
Trigger: CAATAGGACTTTACAGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR GCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGATCCACATGGCGAGAGTaGTTTGAAGAAAATCACAGA +
Preference number: 2 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGSTWRE*FEENHR
Trigger: TCTGTGATTTTCTTCAAAGCACTCTCGCCATGTGGA...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTCACAAACTCCCAGCATaGGGCCACCGTAACATGGAG +
Preference number: 2 (lower is better)
Translates to: LLLSSYVTLGKPACASVSHKLPA*GHRNME
Trigger: CTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTG...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR-3UTR GCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 2 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR TCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAGAGCCTGCTGGATGGTaGGGCCCCTGGATTTTATTC +
Preference number: 2 (lower is better)
Translates to: TLAQTPLMVCTALRTKIREPAGW*GPWILF
Trigger: GAATAAAATCCAGGGGCCTCACCATCCAGCAGGCTC...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTTTGCTCAGTTCCAGATaGTTCCGTGCTTCTCCTGTG +
Preference number: 2 (lower is better)
Translates to: LLLSSYVTLGKPACASVSLLSSR*FRASPV
Trigger: CACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAA...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR-3UTR TCA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCATGGCGAGAGTGCTTTaGAGAAAATCACAGAGGACA +
Preference number: 2 (lower is better)
Translates to: QSIALPYISKSQGPLQSSMARVL*RKSQRT
Trigger: TGTCCTCTGTGATTTTCTTCAAAGCACTCTCGCCAT...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR GCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCGAACGAGAAGGATCCTaGCAGGCAGAGCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GESPGSLADLFKTQIRLCEREGS*QAEPEK
Trigger: TTTCTCTGGCTCTGCCTGGCAGGATCCTTCTCGTTC...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 90 bp CAGTTACTTCACCTGTCTACCCTGCTATTAAGCAGTTATGTGACCTaGGGCAAACCTGCCTGTGCCTCAGTTTCTTTGACTGTAAAACCA +
Preference number: 2 (lower is better)
Translates to: QLLHLSTLLLSSYVT*GKPACASVSLTVKP
Trigger: TGGTTTTACAGTCAAAGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAGGGTAGACAGGTGAAGTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR TCA 72 bp GTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTaGGCCTGGCCACAGCCTGCCTCAGGCCTTCACAGG +
Preference number: 3 (lower is better)
Translates to: VALPGVYPTVRA*AWPQPASGLHR
Trigger: CCTGTGAAGGCCTGAGGCAGGCTGTGGCCAGGCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GCTGCTGACAGGGGCTCCAGGCTCCAGCCCGCCCTTTaGCCAGAGCCCTGGAGGCACATCTGGGTGGCATCA +
Preference number: 3 (lower is better)
Translates to: AADRGSRLQPAL*PEPWRHIWVAS
Trigger: TGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAGCCTGGAGCCCCTGTCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp CGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCAGAACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: RQLACQVLGTHQVQPLSRTSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...TCTGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp CAGCCCGCCCTTTGGCCAGAGCCCTGGAGGCACATCTaGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCG +
Preference number: 3 (lower is better)
Translates to: QPALWPEPWRHI*VASGSWTQSGP
Trigger: CGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GGCTCCAGGCTCCAGCCCGCCCTTTGGCCAGAGCCCTaGAGGCACATCTGGGTGGCATCAGGATCTTGGACC +
Preference number: 3 (lower is better)
Translates to: GSRLQPALWPEP*RHIWVASGSWT
Trigger: GGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAGCCTGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGCAGCCTCTCGAGGGCG +
Preference number: 3 (lower is better)
Translates to: GESLARASRYTR*FHEGSSSLSRA
Trigger: CGCCCTCGAGAGGCTGCTGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp TGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: WCRRAAQSWALGMKTLWVTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...GACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: STESLAQLWPACEYLGPAWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR TCA 72 bp GCCGCCTCTCTGGCCACTGCTCCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCACCAGGTCTGAGAGTT +
Preference number: 3 (lower is better)
Translates to: AASLATAPSAGC*VGCPCPPGLRV
Trigger: AACTCTCAGACCTGGTGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp CTGCCCCTTGGTCCAGCCATCCTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGAGGCTGTCACAGGCAG +
Preference number: 3 (lower is better)
Translates to: LPLGPAILLGQR*HHLSHGGCHRQ
Trigger: CTGCCTGTGACAGCCTCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGACCAAGGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp GTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: VEEAPVVVRQLA*QVLGTHQVQPL
Trigger: GAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp CCTGCCCGAGACTGGGGCAGCTGGGAGACCACCGGGTaGCTGCAGGGTGGTCTGGACTGTAAAGCTGATGGT +
Preference number: 3 (lower is better)
Translates to: PARDWGSWETTG*LQGGLDCKADG
Trigger: ACCATCAGCTTTACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTaGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCG +
Preference number: 3 (lower is better)
Translates to: GESLARASRYTR*FHEGSQALSQA
Trigger: CGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
3UTR TCA 72 bp CAGTTTCTGAGCGTCAGCCAAGAGCCAGGCAGCATGTaGGCAAGGAGAAGCGGAGGTGGGGGCCCGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QFLSVSQEPGSM*ARRSGGGGPQE
Trigger: CTCCTGCGGGCCCCCACCTCCGCTTCTCCTTGCTCACATGCTGCCTGGCTCTTGGCTGACGCTCAGAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp TCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTaGAGAACGGTGAAGGGCCACGGCTGGCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SVVSLGWAHPRV*RTVKGHGWLAG
Trigger: GCCAGCCAGCCAGCCGTGGCCCTTCACCGTTCTTCAGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 72 bp GAGGTGCAGCATCAGCACCTAGCGCAGTGCCCGGCCTaGGAGGGTGAGCCCACATCAGTTTCTGAGCGTCAG +
Preference number: 3 (lower is better)
Translates to: EVQHQHLAQCPA*EGEPTSVSERQ
Trigger: CTGACGCTCAGAAACTGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTGATGCTGCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp AAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCGCCTaGCAGGCAAGTCTCCTGACTCAGGTTCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: KPLSGLCWQGSA*QASLLTQVPLP
Trigger: GGGAAGGGGAACCTGAGTCAGGAGACTTGCCTGGCAGGCGCTGCCCTGCCAGCAGAGGCCTGACAGTGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp GGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCTaGAGCCTCAATACCTACTCAGGAGTCATGCCAGGG +
Preference number: 3 (lower is better)
Translates to: GAIPAASGRPRP*SLNTYSGVMPG
Trigger: CCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 72 bp TGGCAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTaGCCGAGACTGGGGCAGCTGGGAGACCACCGGGTG +
Preference number: 3 (lower is better)
Translates to: WQGLSQQAQKPS*PRLGQLGDHRV
Trigger: CACCCGGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 72 bp TTCTCCAACCTGTGGCATCGCCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTGAGTCGGGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: FSNLWHRRLSGH*SLSRLLSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCGGCGATGCCACAGGTTGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp ACGGGGCAGAGACACAGCTCGGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGCATGAAGCGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: TGQRHSSVATQY*SSLKRRMKRSR
Trigger: CCTGGAGCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCTGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp GGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTaGACGCCCAAGGCCCTGCAGCCTCAATACCTACTC +
Preference number: 3 (lower is better)
Translates to: GAEVQRGHTSCL*TPKALQPQYLL
Trigger: GAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp TGGATGGCACAGCTGCTGCCAGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGCAAGTTCCGGGCCTTC +
Preference number: 3 (lower is better)
Translates to: WMAQLLPGRGSS*LGSQTGKFRAF
Trigger: GAAGGCCCGGAACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 3 (lower is better)
Translates to: SWSVSWPARSLALTRSSPASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp AGGCTGTCACAGGCAGCTGCAGGGTCAACACTGAGTGGTCTGGCCGGCAGATGTCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: RLSQAAAGSTLSGLAGRCQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...ACATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: STESLAQLWPACEYLGPAVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp GCCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACTACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 3 (lower is better)
Translates to: APEMWPHHGHLAAGQWHHYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...GTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp GTGTCCCGTGTCACTGCACATCACGGGTTGTTGAACTaGTCTGCCCCTTGCCTGACTGCAGCCCCACAGGCC +
Preference number: 3 (lower is better)
Translates to: VSRVTAHHGLLN*SAPCLTAAPQA
Trigger: GGCCTGTGGGGCTGCAGTCAGGCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTGCAGTGACACGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp GCCATCACCTCTCTCACGGAGGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGGTCTGGCCGGCAGATG +
Preference number: 3 (lower is better)
Translates to: AITSLTEAVTGS*RVNTEWSGRQM
Trigger: CATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCTCCGTGAGAGAGGTGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp GGTGAGAGAGGCACAGGGTTGTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTGGCCATCATTCTCATC +
Preference number: 3 (lower is better)
Translates to: GERGTGLWLRQW*SIRAALAIILI
Trigger: GATGAGAATGATGGCCAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp GAAATGCTGGTGGAGGACACCGGCCCCCGTGGCACTTaGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTA +
Preference number: 3 (lower is better)
Translates to: EMLVEDTGPRGT*FLLCRWAGLTL
Trigger: TAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCACCAGCATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp CAGAGGAGAAATGCTGGTGGAGGACACCGGCCCCCGTaGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QRRNAGGGHRPP*HLVSVVSLGWA
Trigger: AGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GCAGCTGGGAGACCACCGGGTGGCTGCAGGGTGGTCTaGACTGTAAAGCTGATGGTCCAAGGAGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: AAGRPPGGCRVV*TVKLMVQGGGR
Trigger: TCTCCCTCCTCCTTGGACCATCAGCTTTACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp TCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: STWKWCRRAAQS*ALGMKTLWVRR
Trigger: CCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 72 bp ACAGCCATTCTCCAACCTGTGGCATCGCCGCCTCTCTaGCCACTGCTCCCTCAGCAGGTTGCTGAGTCGGGT +
Preference number: 3 (lower is better)
Translates to: TAILQPVASPPL*PLLPQQVAESG
Trigger: ACCCGACTCAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp TGGCACAGCTGCTGCCAGGAAGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGTTCCGGGCCTTCATCT +
Preference number: 3 (lower is better)
Translates to: WHSCCQEGARPG*GAKQASSGPSS
Trigger: AGATGAAGGCCCGGAACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp AGTGGTGAGAGAGGCACAGGGTTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCTCTGGCCATCATTCTC +
Preference number: 3 (lower is better)
Translates to: SGERGTGLWLRQ*CSIRAALAIIL
Trigger: GAGAATGATGGCCAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTCACCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp GACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGACTGCTCCGAGCATGT +
Preference number: 3 (lower is better)
Translates to: DLQLLDISPGAG*TPGAQGLLRAC
Trigger: ACATGCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGGTGGCATCAGGATCTaGGACCCAGTCTGGCCCGTG +
Preference number: 3 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPGGIRI*DPVWPV
Trigger: CACGGGCCAGACTGGGTCCAAGATCCTGATGCCACC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp AGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGAAGTCGCTAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: SAELGAGHEDPVGQEEVASTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...AGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CAA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGGGGCTCGTCCTGGTaGGGGAGCCAAACAGGCAAG +
Preference number: 3 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTRGSSW*GSQTGK
Trigger: CTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR TCA 72 bp ACGGGAGGGGGCCTGTCTGGGAACCCAGCATTTGGCTaGGATGAGAACGAGAAGGATCCTGCCAGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: TGGGLSGNPAFG*DENEKDPARQS
Trigger: GCTCTGCCTGGCAGGATCCTTCTCGTTCTCATCTCAGCCAAATGCTGGGTTCCCAGACAGGCCCCCTCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp TGGACTGTAAAGTCCTATTGGACCACCACGGGGAGCTaGTGGTCACCCTGGCTGGCTGCTGACAGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: WTVKSYWTTTGS*WSPWLAADRGS
Trigger: GGAGCCCCTGTCAGCAGCCAGCCAGGGTGACCATCAGCTCCCCGTGGTGGTCCAATAGGACTTTACAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp CTCGGGAGAGGCGGGAGAGTTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACATAAGCCCAGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: LGRGGRVPAGCQ*PSAAGHKPRCW
Trigger: CCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCGCCTCTCCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp GGGTTGAATGAGGTGCAGCATCAGCACCTAGCGCAGTaGCCGGCCTGCGAGGGTGAGCCCACATCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: GLNEVQHQHLAQ*PACEGEPTSVS
Trigger: AGAAACTGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTGATGCTGCACCTCATTCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp CCCTCCTCCCCTGCCCAGGCTAACTCCAGTTCCACCTaGCCACGAGGCCTCACTCCTTATCTACTCCAATGG +
Preference number: 3 (lower is better)
Translates to: PSSPAQANSSST*PRGLTPYLLQW
Trigger: CCATTGGAGTAGATAAGGAGTGAGGCCTCGTGGGCAGGTGGAACTGGAGTTAGCCTGGGCAGGGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp CAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTaGTCCGATACTGTGTCAGTGGCCCTGTCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: QSWNPSCSFPPL*SDTVSVALSQP
Trigger: GGGCTGGGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp TCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACATGGAAGTGGTGCAGAA +
Preference number: 3 (lower is better)
Translates to: SCCRRRCCAPAR*HPQAPHGSGAE
Trigger: TTCTGCACCACTTCCATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 72 bp GGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTaGCAGGGCAGCGCCTGCCAGGCAAGTCTCCTGACT +
Preference number: 3 (lower is better)
Translates to: GCSSWKPLSGLC*QGSACQASLLT
Trigger: AGTCAGGAGACTTGCCTGGCAGGCGCTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 72 bp ATACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: ILLKRLQSWSVS*PARSLALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp TCCACCTGGTGGATACTGTTGAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTC +
Preference number: 3 (lower is better)
Translates to: STWWILLKRLQS*SVSWPARSLAL
Trigger: GAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATCCACCAGGTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp AGGGACTGCTCCGAGCATGTGGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGGGAAACTCGGCTTCTG +
Preference number: 3 (lower is better)
Translates to: RDCSEHVEILAT*LSSWRWETRLL
Trigger: CAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGAACTGCTCTGCCCCTaGCCTGACTGCAGCCCCACA +
Preference number: 3 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGELLCP*PDCSPT
Trigger: TGTGGGGCTGCAGTCAGGCAAGGGGCAGAGCAGTTC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGGCACTTGGTTTCTGTaGTGTCGCTGGGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTGTWFL*CRWAGL
Trigger: GAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 3 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR TCA 72 bp AGGGGGCCTGTCTGGGAACCCAGCATTTGGCTGAGATaGGAACGAGAAGGATCCTGCCAGGCAGAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: RGPVWEPSIWLR*EREGSCQAEPE
Trigger: CTCTGGCTCTGCCTGGCAGGATCCTTCTCGTTCTCATCTCAGCCAAATGCTGGGTTCCCAGACAGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp CACGGAGGCTGTCACAGGCAGCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGATGTCATAGGGGACTTT +
Preference number: 3 (lower is better)
Translates to: HGGCHRQLQGQH*VVWPADVIGDF
Trigger: AAAGTCCCCTATGACATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp AAGTGCAAAGGCCCTGAGGGGAGAACGGGCTTCGCCTaGGGAGGAGAAGAAGCCAGTAAGAGTCTCCAGCAG +
Preference number: 3 (lower is better)
Translates to: KCKGPEGRTGFA*GGEEASKSLQQ
Trigger: CTGCTGGAGACTCTTACTGGCTTCTTCTCCTCCGCAGGCGAAGCCCGTTCTCCCCTCAGGGCCTTTGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp GAGCCAGAGAAAGACCCTTCCAGGCTAAGGGATAAGTaGAAAGGCCCTGAGGGGAGAACGGGCTTCGCCTGC +
Preference number: 3 (lower is better)
Translates to: EPEKDPSRLRDK*KGPEGRTGFAC
Trigger: GCAGGCGAAGCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTTCTCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp CGCCCTGAGAGGCTCTCTCCAGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: RPERLSPAPAPL*HVLPAAWSLPP
Trigger: TGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTGGAGAGAGCCTCTCAGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR GCA 72 bp AGCCCCAGAGATGTGGCCACACCACGGGCATCTGGCTaGAGGCCAATGGCATCACCTGCAGAATTGACCTTC +
Preference number: 3 (lower is better)
Translates to: SPRDVATPRASG*RPMASPAELTF
Trigger: GAAGGTCAATTCTGCAGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CCA 72 bp CCTCCAGGGATCCTCCTCCTGGGTTCCCTTTCCTCCTaGGTTTGCCCACCAGGAATCCTCTTCTTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PPGILLLGSLSS*VCPPGILFFLH
Trigger: GTGGAGGAAGAAGAGGATTCCTGGTGGGCAAACCCAGGAGGAAAGGGAACCCAGGAGGAGGATCCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 72 bp ACCTGCCCACGAGGCCTCACTCCTTATCTACTCCAATaGCCCAACTATGCTCCTCCTCCTCCCTCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: TCPRGLTPYLLQ*PNYAPPPPSQV
Trigger: CACCTGGGAGGGAGGAGGAGGAGCATAGTTGGGCCATTGGAGTAGATAAGGAGTGAGGCCTCGTGGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 72 bp TCCTCCCTTCCTTGGCCTTGGGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SSLPWPWVIRYS*LGSTPRSSLAA
Trigger: GGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR CCA 72 bp CCACCCAGCTCTAACTCAGTGCTGAGTGGAGGGGGATaGGGTGCCGGATCTCAGGCTCTGCCTTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: PPSSNSVLSGGG*GAGSQALPSFC
Trigger: ACAAAAGGAAGGCAGAGCCTGAGATCCGGCACCCCATCCCCCTCCACTCAGCACTGAGTTAGAGCTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTGAGGAATGTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: AAQSWALGMKTL*VRRKSLRNVSV
Trigger: AACAGAGACATTCCTCAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 72 bp GTGGAAATCCTCGCCACCTGGCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGTGGTGAGAGAGGCACA +
Preference number: 3 (lower is better)
Translates to: VEILATWLSSWR*ETRLLSGERGT
Trigger: TGTGCCTCTCTCACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCATCAGACCCCTGTCCTaGGCCCAGGGGGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: QSIALPYISKSQGPLQSSIRPLS*AQGALP
Trigger: GGGCAGGGCCCCCTGGGCCAAGGACAGGGGTCTGAT...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGGCAAGGGAACTGGTTaGGTTACCACTGCCATCTGC +
Preference number: 3 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESGKGTG*VTTAIC
Trigger: GCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp CCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 3 (lower is better)
Translates to: PWPPTEALGSSLGCQTSLVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...CAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCTTCAGTGGCGTCCATaGTCTGCTGGAGAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQLQWRP*SAGESP
Trigger: TGGGCTTTCTCCAGCAGACAATGGACGCCACTGAAG...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 3 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAGCCAAGGCCCTGCCCTaGCCACACACGGTACACACA +
Preference number: 3 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEAKALP*PHTVHT
Trigger: TGTGTGTACCGTGTGTGGCAAGGGCAGGGCCTTGGC...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCAAGGCCCTGCCCTaGCCACACACGGTACACACA +
Preference number: 3 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEAKALP*PHTVHT
Trigger: TGTGTGTACCGTGTGTGGCAAGGGCAGGGCCTTGGC...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp CCTCCTGTCCTGATTGCTCAGTTCCAGATGCTTCCGTaGTTCTCCTGTGTCCCCACCCACGGCAAGGGAACT +
Preference number: 3 (lower is better)
Translates to: PPVLIAQFQMLP*FSCVPTHGKGT
Trigger: AGTTCCCTTGCCGTGGGTGGGGACACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAATCAGGACAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GAAGAAAATCACAGAGGACACCAAGGCAGAGCGTGGTaGGAGAAAGGGGAGGGTGCTCCGGATAGGGAGACG +
Preference number: 3 (lower is better)
Translates to: EENHRGHQGRAW*EKGEGAPDRET
Trigger: CGTCTCCCTATCCGGAGCACCCTCCCCTTTCTCCCACCACGCTCTGCCTTGGTGTCCTCTGTGATTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 72 bp GAAGCCTGGCCCAACAGGCCAGGACGAGCTCAAGTGTaGAAAAGCGGGGATTGCAGTTGGGAAGAAGCTGTC +
Preference number: 3 (lower is better)
Translates to: EAWPNRPGRAQV*KSGDCSWEEAV
Trigger: GACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTTGGGCCAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp TCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTaGCCCAACAGGCCAGGACGAGCTCAAGTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: SITSHPQKTPEA*PNRPGRAQVWK
Trigger: TTTCCACACTTGAGCTCGTCCTGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GTGCTTCTCCTGTGTCCCCACCCACGGCAAGGGAACTaGTTTGGTTACCACTGCCATCTGCTGCACCTCAGT +
Preference number: 3 (lower is better)
Translates to: VLLLCPHPRQGN*FGYHCHLLHLS
Trigger: ACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTGGGTGGGGACACAGGAGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp TCTGTGTCCTCTTGCCTGCCCTGGGCACCATTCTCCTaGCAAGGTCTCTCCCAACAGGCTCAAAAGCCATCC +
Preference number: 3 (lower is better)
Translates to: SVSSCLPWAPFS*QGLSQQAQKPS
Trigger: GGATGGCTTTTGAGCCTGTTGGGAGAGACCTTGCCAGGAGAATGGTGCCCAGGGCAGGCAAGAGGACACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GAGCATGTGGAAATCCTCGCCACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTTCTGAGTGGTGAGAGA +
Preference number: 3 (lower is better)
Translates to: EHVEILATWLSS*RWETRLLSGER
Trigger: TCTCTCACCACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTCCACATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCTCGGACCTCAATCCATaGCTCTTCCCTACATTTCCA +
Preference number: 3 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSSDLNP*LFPTFP
Trigger: TGGAAATGTAGGGAAGAGCAATGGATTGAGGTCCGA...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp GCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATaGGTTCTCTCTCTGGCCAGACAAGTGCCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: ASIPTQESCQGP*VLSLARQVPPA
Trigger: AGCAGGAGGCACTTGTCTGGCCAGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp GGACTCCTGACTCACCCAGGCTTGAGCCTCCTGTCCTaGTTGCTCAGTTCCAGATGCTTCCGTGCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: GLLTHPGLSLLS*LLSSRCFRASP
Trigger: AGGAGAAGCACGGAAGCATCTGGAACTGAGCAATCAGGACAGGAGGCTCAAGCCTGGGTGAGTCAGGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp GGCTTTTGCCGAGACACCAGCAGACAATGGGTTGGATaGAAAGAAAGCCCCCGGACTCCTGACTCACCCAGG +
Preference number: 3 (lower is better)
Translates to: GFCRDTSRQWVG*KESPRTPDSPR
Trigger: CCTGGGTGAGTCAGGAGTCCGGGGGCTTTCTTTTCATCCAACCCATTGTCTGCTGGTGTCTCGGCAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 72 bp TGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTaGCAGACATCACTGTATACCGGTTCCTGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: WPPTEALGSSLG*QTSLYTGSCLG
Trigger: CCCCAGGCAGGAACCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 72 bp AGGTGGGGGCCCGCAGGAGGGAAGTCAACTCTCCAGTaGGATGGGAGAGATACCAAAGGACAGAAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: RWGPAGGKSTLQ*DGRDTKGQKAS
Trigger: ACTTGCTTTCTGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGCCCCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CCA 72 bp AGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATaGGGCCACCGTAACATGGAGCCTTTCCCCGCTTTT +
Preference number: 3 (lower is better)
Translates to: SQGDRRQHKLPA*GHRNMEPFPAF
Trigger: AAAAGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp ACAGCCGCTAATTCTCGCTTCACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGCAGCAGCTCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: TAANSRFTELER*ATALMCSSSSK
Trigger: CTTTGAGGAGCTGCTGCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGAATTAGCGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCGCACATCACGGGTTGTaGAACTGCTCTGCCCCTTGC +
Preference number: 3 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTAHHGL*NCSAPC
Trigger: GCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTGC...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 3 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
3UTR-3UTR CAA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGGGAAGAAGCTGTCAGTaGCATCTGGACTGTAAAGTC +
Preference number: 3 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWGRSCQ*HLDCKV
Trigger: GACTTTACAGTCCAGATGCAACTGACAGCTTCTTCC...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCGTATGACCAGAGCTaGCTGGGACCATTCTCAACA +
Preference number: 3 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSYDQS*LGPFST
Trigger: TGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCGAATCTGCACTGGAGTaGGCTCTTCCCCTCCCGTTT +
Preference number: 3 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTESALE*ALPLPF
Trigger: AAACGGGAGGGGAAGAGCCAACTCCAGTGCAGATTC...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 3 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTGACTGTAAAGTCCTATaGGACCACCACGGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSDCKVL*DHHGEL
Trigger: CAGCTCCCCGTGGTGGTCCAATAGGACTTTACAGTC...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 3 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 3 (lower is better)
Translates to: PWPPTEALGSSLGCQTSLPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...CAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR GCA 72 bp ACCCCTGCAGAGTTCCTTACTGCCTCATGTGTCGCCTaGACATGGGTGATTCCCAAAACTACCAGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: TPAEFLTASCVA*TWVIPKTTSSA
Trigger: AGCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp AGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTaGAGTTGGGAAGAAGCTGTCAGTTGCATCTGGACT +
Preference number: 3 (lower is better)
Translates to: RPGRAQVWKSGD*SWEEAVSCIWT
Trigger: AGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp ACACTGATGATAAACCCTGATTTCCTGGAAGTCTGTTaGGCCTCAACAAGCGACGGGCTCTCCGCGGAAGCT +
Preference number: 3 (lower is better)
Translates to: TLMINPDFLEVC*ASTSDGLSAEA
Trigger: AGCTTCCGCGGAGAGCCCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAAATCAGGGTTTATCATCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp TCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SLLGHEHWNLVP*PPTEALGSSLG
Trigger: CCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CAA 90 bp GGAATGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACACTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 3 (lower is better)
Translates to: GMSLLGHEHWNLVPWPPTLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...TGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR-3UTR CAA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTGCGGAAGCTTCAGCATaGTTTCTATCACAAGCCACC +
Preference number: 3 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSAEASA*FLSQAT
Trigger: GGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGC...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp GAAGTGCTGAAGGGGCAGGGAAGAGAGGACTTCGTATaGCCAGAGCTTGCTGGGACCATTCTCAACACTGAT +
Preference number: 3 (lower is better)
Translates to: EVLKGQGREDFV*PELAGTILNTD
Trigger: ATCAGTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGAAGTCCTCTCTTCCCTGCCCCTTCAGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp ATACGGTTGAAGTCCTGCTTGTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGGATGATGGTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: IRLKSCLSTRRK*QLSSRRMMVAA
Trigger: GGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR GCA 72 bp TTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTaGCTCATGTGTCGCCTGCACATGGGTGATTCCCAA +
Preference number: 3 (lower is better)
Translates to: FPNLRDPCRVPY*LMCRLHMGDSQ
Trigger: TTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp TTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTaGAGAGTTCCTTACTGCCTCATGTGTCGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: LLFPTFPNLRDP*RVPYCLMCRLH
Trigger: GTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp CCTCTCTCTCTCTCTCTGTCCACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACAAAGCCAGAGGCACAG +
Preference number: 3 (lower is better)
Translates to: PLSLSLSTVKIN*RPGWTTKPEAQ
Trigger: CTGTGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGTGGACAGAGAGAGAGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CCA 72 bp GCAGAGTTCCTTACTGCCTCATGTGTCGCCTGCACATaGGTGATTCCCAAAACTACCAGCAGTGCTGAACTC +
Preference number: 3 (lower is better)
Translates to: AEFLTASCVACT*VIPKTTSSAEL
Trigger: GAGTTCAGCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTTACAGTTTTATGTGTTaGTCACTAAGCGCTGTATGG +
Preference number: 3 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESYSFMC*SLSAVW
Trigger: CCATACAGCGCTTAGTGACAAACACATAAAACTGTA...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TGGAATCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCTTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: WNLVPWPPTEALGSSLGCFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...GCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR-3UTR CAA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCTTTGAAGATTCTTCTTaGAAGTGGGTCTTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCFEDSS*KWVFCA
Trigger: GGCACAGAAGACCCACTTCAAAGAAGAATCTTCAAA...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGGAAGAAGCTGTCAGTaGCATCTGGACTGTAAAGTC +
Preference number: 3 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEGRSCQ*HLDCKV
Trigger: GACTTTACAGTCCAGATGCAACTGACAGCTTCTTCC...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp TGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGAAGTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 3 (lower is better)
Translates to: CLCWVMSTGIWSHGLQQKSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...CTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
3UTR CCA 72 bp GGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGCATCTGGACTGTAAAG +
Preference number: 3 (lower is better)
Translates to: GRAQVWKSGDCS*EEAVSCIWTVK
Trigger: CTTTACAGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR-3UTR CAA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCAGGAGCGGACTACAGTaGGAAGAGCCGACTCCAGTG +
Preference number: 3 (lower is better)
Translates to: GESPGSLADLFKTQIRLCRSGLQ*EEPTPV
Trigger: CACTGGAGTCGGCTCTTCCAACTGTAGTCCGCTCCT...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp AGTTCCTTACTGCCTCATGTGTCGCCTGCACATGGGTaGTTCCCAAAACTACCAGCAGTGCTGAACTCTCTT +
Preference number: 3 (lower is better)
Translates to: SSLLPHVSPAHG*FPKLPAVLNSL
Trigger: AAGAGAGTTCAGCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTAAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp GTTCTTTCTCCCACCATTCCTCAACCAAATCCTGGCTaGAGTCACATCTTCTCATCCCCTCTTTGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: VLSPTIPQPNPG*SHIFSSPLCFP
Trigger: AGGGAAGCAAAGAGGGGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR-3UTR CAA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAGGAATAAAAGGCCCATaGAGTCAGGGAGTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRGIKGP*SQGVGE
Trigger: CTCGCCCACTCCCTGACTCAATGGGCCTTTTATTCC...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR TCA 72 bp AACCCTGGTCTCAAAAACCCCCTGCATCCTTCCACATaGATGATCCATTACCTCACACTCCATATACCCATC +
Preference number: 3 (lower is better)
Translates to: NPGLKNPLHPST*MIHYLTLHIPI
Trigger: GATGGGTATATGGAGTGTGAGGTAATGGATCATTCATGTGGAAGGATGCAGGGGGTTTTTGAGACCAGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp GGTGGAGAAATGAAGGAAGAGAACTGTTCACTGACTTaGTCAGATTCACTTAGTGACCTGAGGTCTAAGCCC +
Preference number: 3 (lower is better)
Translates to: GGEMKEENCSLT*SDSLSDLRSKP
Trigger: GGGCTTAGACCTCAGGTCACTAAGTGAATCTGAGCAAGTCAGTGAACAGTTCTCTTCCTTCATTTCTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR GCA 72 bp CAAGTAGGCAAAGAAAACAACTCCACATGGCGAGAGTaGTTTGAAGAAAATCACAGAGGACACCAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: QVGKENNSTWRE*FEENHRGHQGR
Trigger: TCTGCCTTGGTGTCCTCTGTGATTTTCTTCAAAGCACTCTCGCCATGTGGAGTTGTTTTCTTTGCCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR GCA 72 bp CCTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTaGCTGTGCCTCAGTTTCTTTGACTGTAAAACCAGA +
Preference number: 3 (lower is better)
Translates to: PAIKQLCDLGQT*LCLSFFDCKTR
Trigger: TCTGGTTTTACAGTCAAAGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR CCA 72 bp AGCGCTGTATGGCGTTTATCATACCTGGCTTACAGGTaGAGAAATGAAGGAAGAGAACTGTTCACTGACTTG +
Preference number: 3 (lower is better)
Translates to: SAVWRLSYLAYR*RNEGRELFTDL
Trigger: CAAGTCAGTGAACAGTTCTCTTCCTTCATTTCTCCACCTGTAAGCCAGGTATGATAAACGCCATACAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR TCA 72 bp TACCTATTCTGTCATCAGGATAAAAATAACGTAACGTaGGACAGGGTGAAGATGAAAGAAGATGAAAACACC +
Preference number: 3 (lower is better)
Translates to: YLFCHQDKNNVT*DRVKMKEDENT
Trigger: GGTGTTTTCATCTTCTTTCATCTTCACCCTGTCTCACGTTACGTTATTTTTATCCTGATGACAGAATAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR TCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGCTGCCTCCCAGCCCTaGGCACCCGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHAASQP*APALWR
Trigger: CCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GMTGGESLARASRYTRWFEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCCAACTGAGGCGAGGCTaGCCCCCTACCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSQLRRG*PPTRPG
Trigger: TCCAGGCCTGGTAGGGGGGCAGCCTCGCCTCAGTTG...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCGTCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPVQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGAC...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCCTCTGGGAGTGGCCTaGCCCCCTGGGCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARAPLGVA*PPGPQL
Trigger: GAGTTGCGGCCCAGGGGGCCAGGCCACTCCCAGAGG...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGCTGCCTCCCAGCCCTaGGCACCCGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAAASQP*APALWR
Trigger: CCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SWSVSWPARSLALTRSSPRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGTCCCAGCCCCTCCTCATGGCTCCAGCTCTCGGGAGAGGCGGGAGAGTTCCCGTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: SPSPSSWLQLSGEAGEFPWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...CGGGAACTCTCCCGCCTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR CCA 90 bp CAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: QEGRAWRGPVGIPGGSMRSRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...CCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
3UTR CAA 72 bp TGCCAGACATCACTGTATACCGGTTCCTGCCTGGGGTaGGGGGTCGGGAAGGGCCGGCGCCCTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CQTSLYTGSCLG*GVGKGRRPERL
Trigger: GAGCCTCTCAGGGCGCCGGCCCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTATACAGTGATGTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPQVASR*RCSCLP
Trigger: TGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTG...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCCGCGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLPLVADVGAALLLAATRGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...GCGGGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RRAAQSWALGMKTLWVRRCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...CCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCCGCTGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLPLVADVGAALLLAATRCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...GCGGGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAWLRQW*SIRAAL
Trigger: CAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTGGCTGGACTCCGGGTaGTCAGGGACTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPWLDSG*SGTAPS
Trigger: GCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCTGGCTGGACTCCGGGTaGTCAGGGACTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAWLDSG*SGTAPS
Trigger: GCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGACTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGESLARASRYTRWFHEGLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...TCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCACTTGGCTCCGGGAATaGACCCCAAGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPTWLRE*TPSPRA
Trigger: GGCCCTGGGACTTGGGGTCCATTCCCGGAGCCAAGT...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCRAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHGRGSS*LGSQTG
Trigger: GCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QEGRAWRGPVGIPGGSMRGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...CCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp ATGAAGGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: MKGMTGGESLARASRYTRSRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...CCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCCTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCCTGCCACGCCCACTCTaGGCTGGCCTGGAACATACT +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSLPRPL*AGLEHT
Trigger: AGTATGTTCCAGGCCAGCCCAGAGTGGGCGTGGCAG...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 72 bp TGCAGCTCATTGAAGCGGCGCATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGCAGATGCTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CSSLKRRMKRSR*AVVTSRRCWGP
Trigger: GGGCCCCCAGCATCTGCGGGATGTCACCACCGCCAACCTGGAGCGCTTCATGCGCCGCTTCAATGAGCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGCTGCCTCCCAGCCCTaGGCACCCGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHAASQP*APALWR
Trigger: CCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GMTGGESLARASRYTRWFVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAACCTCCCCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SMRDPRLCHRRTRGFQPPPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...GGGAGGTTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR TCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GDDRRGELGEGQSVYPVVAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...AACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCACCACCACGGGGAGCTaGTGGTCACCCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLTTTGS*WSPWLA
Trigger: AGCCAGCCAGGGTGACCATCAGCTCCCCGTGGTGGT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCCTTTAAGCCCCAGCTaGGAATGGCCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSPLSPS*EWPGAP
Trigger: GGGGGCCCCAGGCCATTCTCAGCTGGGGCTTAAAGG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAGTGAACTGGGCCAGTaGCTAGCTGGACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCSELGQ*LAGLAA
Trigger: GGCAGCCAGTCCAGCTAGGCACTGGCCCAGTTCACT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASALYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGGATGGCACAGCTGCTaGCAGGAAGGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPGWHSC*QEGARP
Trigger: AGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGGATGGCACAGCTGCTaGCAGGAAGGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHGWHSC*QEGARP
Trigger: AGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCTFTST*PLVQPS
Trigger: GGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: GDDRRGELGEGQSVYPVVVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...AACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGGATGCAGGGCTCGGTaGAGAGGCTCCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAGCRAR*RGSSWV
Trigger: CACCCAAGAGGAGCCTCTCCACCGAGCCCTGCATCC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGGGCCAGTGCCTAGCTaGACTGGCTGCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSGPVPS*TGCQGS
Trigger: GCTGCCCTGGCAGCCAGTCCAGCTAGGCACTGGCCC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAATGCAGCTCGGACGCTaGTGCTCCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAMQLGR*CSSSSW
Trigger: CCAGCTGCTGCTGGAGCACCAGCGTCCGAGCTGCAT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCATGCAGCTCGGACGCTaGTGCTCCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAMQLGR*CSSSSW
Trigger: CCAGCTGCTGCTGGAGCACCAGCGTCCGAGCTGCAT...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGATGCAGCTCGGACGCTaGTGCTCCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPMQLGR*CSSSSW
Trigger: CCAGCTGCTGCTGGAGCACCAGCGTCCGAGCTGCAT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCTCAGCAGACCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RQLACQVLGTHQVQPLSRPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...TCTGCTGAGGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAGRGSS*LGSQTG
Trigger: GCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACCGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: PQRCGHTTGIWLQANGITVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...GGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCACACCACGGGCATCTaGCTGCAGGCCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHHTTGI*LQANGI
Trigger: GATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPASWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPASRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPALWLRQ*CSIRAA
Trigger: AGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCCCAGCCCCTCCTCATaGCTCCAGCTCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGPSPSS*LQLSGE
Trigger: CTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCAGCCCGCCCTTTaGCCAGAGCCCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGLQPAL*PEPWRH
Trigger: GTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGAGGAGAAATGCTGGTaGAGGACACCGGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPEEKCW*RTPAPV
Trigger: CACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCCAGAGGAGAAATGCTaGTGGAGGACACCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAPEEKC*WRTPAP
Trigger: GGGGGCCGGTGTCCTCCACCAGCATTTCTCCTCTGG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCCAGAGGAGAAATGCTaGTGGAGGACACCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARAPEEKC*WRTPAP
Trigger: GGGGGCCGGTGTCCTCCACCAGCATTTCTCCTCTGG...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCCCTGCACACAGCCTaGGCTGCTAGGGAACACCAG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAPLHTA*AAREHQ
Trigger: CTGGTGTTCCCTAGCAGCCCAGGCTGTGTGCAGGGG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCAGGCGTGGCCCTCCCTaGTGTGTACCCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARARRGPP*CVPHSQ
Trigger: CTGACTGTGGGGTACACACCAGGGAGGGCCACGCCT...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGAGGCGTGGCCCTCCCTaGTGTGTACCCCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPRRGPP*CVPHSQ
Trigger: CTGACTGTGGGGTACACACCAGGGAGGGCCACGCCT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGAGAGAGGGGACAGCTaGCTCCAGGCGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPERGDS*LQAEML
Trigger: CAGCATCTCCGCCTGGAGCCAGCTGTCCCCTCTCTC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCTGAGTGGAGGGGGATaGGGTGCCGGATCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARALSGGG*GAGSQA
Trigger: AGCCTGAGATCCGGCACCCCATCCCCCTCCACTCAG...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAGGCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: IQGHPLADQPQDLLPLVAGQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGCC...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
3UTR CAA 72 bp AGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: RALPSCGQPVSI*ARHTLAFPAAS
Trigger: ACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCACTCCTCGCTGTTGGTaGGTGGTGTCCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSTPRCW*VVSSAA
Trigger: GGCTGCGCTGGACACCACTCACCAACAGCGAGGAGT...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACTTCCGGTCTCGGATaGGGTTTGGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPATSGLG*GLGRWP
Trigger: TGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTCCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGCTGTGGCCAGCCTGTaGGTATCTTGGCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGAVASL*VSWPGT
Trigger: TGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCCACATCCATGGGGCTaGAGTGCAGAGGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAPHPWG*SAEGPY
Trigger: GTATGGCCCCTCTGCACTTCAGCCCCATGGATGTGG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGAGTCTGAAGAACGGTaGAGGGCCACGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGESEER*RATAGW
Trigger: CCAGCCAGCCGTGGCCCTTCACCGTTCTTCAGACTC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAAGTGAACTGGGCCAGTaGCTAGCTGGACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPASELGQ*LAGLAA
Trigger: GGCAGCCAGTCCAGCTAGGCACTGGCCCAGTTCACT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCGCTCTGTGGAGGCCTaGTCCAGGCTCTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASARSVEA*SRLSLK
Trigger: TTTCAGCGAGAGCCTGGAGCAGGCCTCCACAGAGCG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: APEMWPHHGHLAAGQWHHCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...GTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCCACGGGCATCTGGCTaGAGGCCAATGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPPRASG*RPMASP
Trigger: AGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCTCTGGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: LARASRYTRWFHEGSQALVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...CAGAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR GCA 90 bp GGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GRAWRGPVGIPGGSMRDPVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...GGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGWLRQW*SIRAAL
Trigger: CAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGCTGGACTCCGGGTaGTCAGGGACTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSWLDSG*SGTAPS
Trigger: GCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCCAGAGATGTGGCCACACCACGGGCATCTGGCTGCAGGCCAATGGCATCACCTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PQRCGHTTGIWLQANGITCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp TGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WCRRAAQSWALGMKTLWVITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...GACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCTTCCTGGGTGAGCTCTaGCTCGCAAGAGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAFLGEL*LARGVL
Trigger: CAGGACGCCTCTTGCGAGGCAGAGCTCACCCAGGAA...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGAGGGGCCATACCAGCTaGCTCTGGACGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWRGHTS*LWTPKA
Trigger: GGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCT...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCATGCAGCTCGGACGCTaGTGCTCCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAMQLGR*CSSSSW
Trigger: CCAGCTGCTGCTGGAGCACCAGCGTCCGAGCTGCAT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCTCGCTGTTGGTGAGTaGTGTCCAGCGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGLAVGE*CPAQPL
Trigger: CAGGGGCTGCGCTGGACACCACTCACCAACAGCGAG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCCAGATTCCCACAACTTaGCTCCGGGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSQIPTT*LREWTP
Trigger: TGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTG...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGCGTCAGGCCCCCGCTaGGAGAGCAGGGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGASGPR*ESRATA
Trigger: AGCTGTGGCCCTGCTCTCCCAGCGGGGGCCTGACGC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHGARPG*GAKQAS
Trigger: ACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVGRGSS*LGSQTG
Trigger: GCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCC...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCACACCACGGGCATCTaGCTGCAGGCCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPHTTGI*LQANGI
Trigger: GATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSSRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: GMTGGESLARASRYTRWFQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLLWLRQ*CSIRAA
Trigger: AGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGAGAGGCACAGGGTTGTaGCTTCGGCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPRGTGL*LRQWCS
Trigger: GCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAEILAT*LSSWRW
Trigger: CCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCTGCCACGCCCACTCTaGGCTGGCCTGGAACATACT +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPLPRPL*AGLEHT
Trigger: AGTATGTTCCAGGCCAGCCCAGAGTGGGCGTGGCAG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGCCCGTGCCCAGCATaGGGCTGCTTCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGPCPA*GCFSST
Trigger: TGTGGAGGAGAAGCAGCCCCATGCTGGGCACGGGCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCGGAGGCACATCTGGGTaGCATCAGGATCTTGGACCC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCGGTSG*HQDLGP
Trigger: GGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCC...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCCCTGGAGGCACATCTaGGTGGCATCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCPWRHI*VASGSW
Trigger: CCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCATACCAGCTGCCTCTaGACGCCCAAGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGHTSCL*TPKALQ
Trigger: CTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGGCCCCCGTGGCACTTaGTTTCTGTTGTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAGPRGT*FLLCRW
Trigger: CCAGCGACACAACAGAAACCAAGTGCCACGGGGGCC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGTGGGAGACCACCGGGTaGCTGCAGGGTGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLWETTG*LQGGLD
Trigger: GTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCA...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCGAGACTGGGGCAGCTaGGAGACCACCGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHRDWGS*ETTGWL
Trigger: CAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCCTCTGGGAGTGGCCTaGCCCCCTGGGCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCPLGVA*PPGPQL
Trigger: GAGTTGCGGCCCAGGGGGCCAGGCCACTCCCAGAGG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGGTCTGTGGGGAGGCGTaGCCCTCCCTGGTGTGTACC +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGVCGEA*PSLVCT
Trigger: GGTACACACCAGGGAGGGCCACGCCTCCCCACAGAC...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTACTCCACCCCGTCTGTaGGGAGGCGTGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPTPPRL*GGVALP
Trigger: AGGGAGGGCCACGCCTCCCCACAGACGGGGTGGAGT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACCCACCAGGAGCCCCGTaGGCCTCAGGGGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADPPGAP*ASGANS
Trigger: GGAGTTGGCCCCTGAGGCCCACGGGGCTCCTGGTGG...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTTCAGAGAGCTGTCATaGGGAGTGCCGGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPFRELS*GVPGAW
Trigger: CCATGCCCCCGGCACTCCCCATGACAGCTCTCTGAA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAATCCGTGCGCTGACCTaGGCCAGCGCAGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: IQGHPLADQPQDLLPLVAIRALT*ASAAPG
Trigger: TCCAGGGGCTGCGCTGGCCCAGGTCAGCGCACGGAT...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCACTCCTCGCTGTTGGTaGGTGGTGTCCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSTPRCW*VVSSAA
Trigger: GGCTGCGCTGGACACCACTCACCAACAGCGAGGAGT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGCTCCAGGCTCTCGCTaGAATCCAGGGACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESAPGSR*NPGTPR
Trigger: GCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGAGC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGCTCCAGGCTCTCGCTaGAATCCAGGGACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGAPGSR*NPGTPR
Trigger: GCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGAGC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGCTGCCTCCCAGCCCTaGGCACCCGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHAASQP*APALWR
Trigger: CCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCACTTCCGGTCTCGGATaGGGTTTGGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLTSGLG*GLGRWP
Trigger: TGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLSSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASASSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCACCAGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACAGGGTCAGTGTGGTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PTRSESFWRKLVATGSVWCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...CCACACTGACCCTGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp TGGAATCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WNLVPWPPTEALGSSLGCEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...GCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QDLLPLVADVGAALLLAAVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLLQGQH*VVWPAD
Trigger: ATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAAAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGSMRDPRLCHRRTRGFQSFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...TTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGSFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTGGAGCTTCCTGGGTaGGCTCTGCCTCGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGLELPG*ALPRKR
Trigger: CCTCTTGCGAGGCAGAGCTCACCCAGGAAGCTCCAG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTCCAGGCGGAGATGCTaGAGCAGCAGAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGSRRRC*SSRGCW
Trigger: CCAGCACCCTCTGCTGCTTCAGCATCTCCGCCTGGA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGTCCAGGCGGAGATGCTaGAGCAGCAGAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGSRRRC*SSRGCW
Trigger: CCAGCACCCTCTGCTGCTTCAGCATCTCCGCCTGGA...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCGGCCTCGCCTTCCTCTaGGCTCCCACAGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGGLAFL*APTALA
Trigger: GGCCAGTGCTGTGGGAGCTCAGAGGAAGGCGAGGCC...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCTTCATCCGTGCGCTaGCCTGGGCCAGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSSSVR*PGPAQP
Trigger: GGGCTGCGCTGGCCCAGGTCAGCGCACGGATGAAGA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGRCRCS*LPALST
Trigger: GGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSQVASR*RCSCLP
Trigger: TGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: DLLPLVADVGAALLLAATWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR GCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCSAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGGATGGCACAGCTGCTaGCAGGAAGGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSGWHSC*QEGARP
Trigger: AGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGA +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGALLGQR*HHLSHG
Trigger: TCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGAAGTCGCTACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: SAELGAGHEDPVGQEEVATFTST*PLVQPS
Trigger: GGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGT...AGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSWLRQW*SIRAAL
Trigger: CAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCGGGTGCTCAGGGACTaGTCCGAGCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPRVLRD*SEHVEI
Trigger: GATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGGCTGGACTCCGGGTaGTCAGGGACTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPWLDSG*SGTAPS
Trigger: GCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCAGACAAGTGCCTCCTaGTGCCAGGACTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAQTSAS*CQDSGQ
Trigger: TTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGGACGCCCAAGGCCCTaGAGCCTCAATACCTACTCA +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAGRPRP*SLNTYS
Trigger: TGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGGGAACACCAGAGGATaGCTCCTGCCCCACACCACC +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLGNTRG*LLPHTT
Trigger: GGTGGTGTGGGGCAGGAGGCATCCTCTGGTGTTCCC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCCCTCTGTCCTGTCCTaGCCGGTAGGACACACACGC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWPSVLS*PVGHTR
Trigger: GCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCAGCCTGGCCACAGCCTaGCTCAGGCCTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSSLATA*LRPSQG
Trigger: TCCCTGTGAAGGCCTGAGGCAGGCTGTGGCCAGGCT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACACAGCACCTAGCGCAGTaGCCGGCCTGCGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTQHLAQ*PACEGE
Trigger: CTCACCCTCGCAGGCCGGGCACTGCGCTAGGTGCTG...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCCCAGCTCTTCATCCGTaGGCTGACCTGGGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSPALHP*ADLGQR
Trigger: GCGCTGGCCCAGGTCAGCGCACGGATGAAGAGCTGG...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGGAGAGGCTCCTCTTaGGTGAGTAGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLWRGSS*VSRGVG
Trigger: CCCCACCCCTCTACTCACCCAAGAGGAGCCTCTCCA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR CCA 90 bp GGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCAGCAGCTCTCACCTaGCCAGCCCACCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: GDDRRGELGEGQSVYPVVPAALT*PAHLHV
Trigger: AACATGAAGGTGGGCTGGCCAGGTGAGAGCTGCTGG...AACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGTCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASVQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGAC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGTCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGVQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGAC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGTCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTVQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGAC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCTCGCTGTTGGTGAGTaGTGTCCAGCGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESLAVGE*CPAQPL
Trigger: CAGGGGCTGCGCTGGACACCACTCACCAACAGCGAG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCAGATTCCCACAACTTaGCTCCGGGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHQIPTT*LREWTP
Trigger: TGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGAGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GGESLARASRYTRWFHEGGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...TCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPARAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCCCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DLLPLVADVGAALLLAATPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGRGSS*LGSQTG
Trigger: GCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGSWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHSWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHSWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAGCCGCTCCCAGGTGTaGGCTAGGCGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSRSQV*ARRLMA
Trigger: GGCCATCAGCCGCCTAGCCCACACCTGGGAGCGGCT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: WKWCRRAAQSWALGMKTLQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...CAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATTTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHLWLRQ*CSIRAA
Trigger: AGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAA...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGAGAGGCACAGGGTTGTaGCTTCGGCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVRGTGL*LRQWCS
Trigger: GCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCT...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPTWLSS*RWETRL
Trigger: AAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAEILAT*LSSWRW
Trigger: CCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCACTGCTCCGAGCATGTaGAAATCCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASATAPSM*KSSPPG
Trigger: GCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGT...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACTGCTCCGAGCATGTaGAAATCCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPATAPSM*KSSPPG
Trigger: GCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCCCAGCCCCTCCTCATaGCTCCAGCTCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHPSPSS*LQLSGE
Trigger: CTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCCCAGCCCCTCCTCATaGCTCCAGCTCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLPSPSS*LQLSGE
Trigger: CTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GATACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: DTVEEAPVVVRQLACQVLWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...AAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCAACTGCAGGCCTGGCTaGACAACAAAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPNCRPG*TTKPEA
Trigger: TGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTT...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCGTGGCATCAGGATCTTaGACCCAGTCTGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLVASGS*TQSGPC
Trigger: GCACGGGCCAGACTGGGTCCAAGATCCTGATGCCAC...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACTCCAGCCCGCCCTTTaGCCAGAGCCCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSLQPAL*PEPWRH
Trigger: GTGCCTCCAGGGCTCTGGCCAAAGGGCGGGCTGGAG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCTTCCTGGAAGTCTGTTaGGCCTCAACAAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPFLEVC*ASTSDG
Trigger: CCCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAA...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCCGTCCTGGCAGTAGCTaGTTCCTAGGGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARARPGSS*FLGEVL
Trigger: CAGCACTTCCCCTAGGAACCAGCTACTGCCAGGACG...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGTCCCTGGAGCTTCCTaGGTGAGCTCTGCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGVPGAS*VSSASQ
Trigger: TTGCGAGGCAGAGCTCACCCAGGAAGCTCCAGGGAC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCAGAGGGTGGAGTCCCTaGAGCTTCCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLRGWSP*SFLGEL
Trigger: GAGCTCACCCAGGAAGCTCCAGGGACTCCACCCTCT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCACGGCTGGCTGGCTaGCTTTTGCCGAGACACCAG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPRLAG*LLPRHQ
Trigger: CTGGTGTCTCGGCAAAAGCCAGCCAGCCAGCCGTGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGAGGGCCACGGCTGGCTaGCTGGCTTTTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLRATAG*LAFAET
Trigger: TGTCTCGGCAAAAGCCAGCCAGCCAGCCGTGGCCCT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGGTGAAGGGCCACGGCTaGCTGGCTGGCTTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGVKGHG*LAGFCR
Trigger: TCGGCAAAAGCCAGCCAGCCAGCCGTGGCCCTTCAC...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCATCCTGCCCGAGACTaGGGCAGCTGGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHHPARD*GSWETT
Trigger: GGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCAGTGGCCTGGCCCCCTaGGCCGCAACTCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSSGLAP*AATLLA
Trigger: AGCTAGAAGAGTTGCGGCCCAGGGGGCCAGGCCACT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGACACCACCCCACGCTTaGGCAGTCAGGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPTPPHA*AVRETE
Trigger: TTCTGTCTCCCTGACTGCCCAAGCGTGGGGTGGTGT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCCCCTGCACACAGCCTaGGCTGCTAGGGAACACCAG +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESPLHTA*AAREHQ
Trigger: CTGGTGTTCCCTAGCAGCCCAGGCTGTGTGCAGGGG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCTGAGTGGAGGGGGATaGGGTGCCGGATCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESLSGGG*GAGSQA
Trigger: AGCCTGAGATCCGGCACCCCATCCCCCTCCACTCAG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGACTGTCAGGCCTCTGCTaGCAGGGCAGCGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGLSGLC*QGSACQ
Trigger: CTGGCAGGCGCTGCCCTGCCAGCAGAGGCCTGACAG...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACATCAGACCCCTGTCCTTaGCCCAGGGGGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTSDPCP*PRGPCP
Trigger: TGGGCAGGGCCCCCTGGGCCAAGGACAGGGGTCTGA...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp GTGGAGGACACCGGCCCCCGTGGCACTTGGTTTCTGTaGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VEDTGPRGTWFL*CRWAGLTLESE
Trigger: TTCAGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 72 bp AGAAATGCTGGTGGAGGACACCGGCCCCCGTGGCACTaGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: RNAGGGHRPPWH*VSVVSLGWAHP
Trigger: AGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCCTCCACCAGCATTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 72 bp AGACACAGCTCGGTGGCCACCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGCTCCAGGTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RHSSVATQYCSS*KRRMKRSRLAV
Trigger: CACCGCCAACCTGGAGCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCACTCCTCGCTGTTGGTaGGTGGTGTCCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSTPRCW*VVSSAA
Trigger: GGCTGCGCTGGACACCACTCACCAACAGCGAGGAGT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCGCTGCCTCCCAGCCCTaGGCACCCGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTAASQP*APALWR
Trigger: CCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGC...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCATGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GAAGGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: EGDDRRGELGEGQSVYPVVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...CACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWLQGQH*VVWPAD
Trigger: ATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCATCACCTGCAGAATTaGCCTTCACCAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHHHLQN*PSPAPA
Trigger: GGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATG...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRAWRGPVGIPGGSMRDPQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...GGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPSFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTACCCGGTGGTTCCATaGGGGATCCAGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGYPVVP*GIQQPL
Trigger: GAGAGGCTGCTGGATCCCTCATGGAACCACCGGGTA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: GMTGGESLARASRYTRWFPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCAGAGAGGACTTCGTATaGCCAGAGCTTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAREDFV*PELAGT
Trigger: GGTCCCAGCAAGCTCTGGTCATACGAAGTCCTCTCT...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCAGACAATGGGTTGGATaGAAAGAAAGCCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSRQWVG*KESPRT
Trigger: AGTCCGGGGGCTTTCTTTTCATCCAACCCATTGTCT...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGAGTCTGAAGAACGGTaGAGGGCCACGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSESEER*RATAGW
Trigger: CCAGCCAGCCGTGGCCCTTCACCGTTCTTCAGACTC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAACCTTACCCGGTGGTTCCATaGGGGATCCCAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GSMRDPRLCHRRTRGFQPYPVVP*GIPGSV
Trigger: GACAGAGCCTGGGATCCCTCATGGAACCACCGGGTA...AGGTTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGGGAGCCCCGAGCCTaGGCCTTCGTCTCAGACGAA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTREPRA*AFVSDE
Trigger: TTCGTCTGAGACGAAGGCGCAGGCTCGGGGCTCCCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSRCRCS*LPALST
Trigger: GGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTRCRCS*LPALST
Trigger: GGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHQVASR*RCSCLP
Trigger: TGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR GCA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SWSVSWPARSLALTRSSPEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: WCRRAAQSWALGMKTLWVAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCACTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASASTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LADQPQDLLPLVADVGAACCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...CGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPASAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPATSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: RRAAQSWALGMKTLWVRRTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...CCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGGATGGCACAGCTGCTaGCAGGAAGGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHGWHSC*QEGARP
Trigger: AGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGGATGGCACAGCTGCTaGCAGGAAGGGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSGWHSC*QEGARP
Trigger: AGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSLGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTCGCTTCACCGAGTTGGAGAGGTGGGCCACAGCCTTGATGTGCAGCAGCTCCCTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGA +
Preference number: 4 (lower is better)
Translates to: SRFTELERWATALMCSSSLLGQR*HHLSHG
Trigger: TCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAG...GGAGCTGCTGCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSTFTST*PLVQPS
Trigger: GGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCACGGGCATCTGGCTaGAGGCCAATGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPRASG*RPMASP
Trigger: AGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTWLRQW*SIRAAL
Trigger: CAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCA...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCGGGTGCTCAGGGACTaGTCCGAGCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGARVLRD*SEHVEI
Trigger: GATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCGGGTGCTCAGGGACTaGTCCGAGCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLRVLRD*SEHVEI
Trigger: GATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCCACGGAGAGCCTTaGCCAGCTGTGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHLHGEP*PAVASL
Trigger: CAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACCCAGGCCAAGGCCCTaGCCTTGCCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSPRPRP*PCHTRY
Trigger: GTACCGTGTGTGGCAAGGGCAGGGCCTTGGCCTGGG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGCCCGCAGCCCCACTaGCTGCTGTTGGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPGPQPH*LLLEES
Trigger: GCTTTCTTCCAACAGCAGGCAGTGGGGCTGCGGGCC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCACCCAGTCTGGCCCGTaGCCAGCATGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCTQSGP*PAWGCF
Trigger: GAAGCAGCCCCATGCTGGGCACGGGCCAGACTGGGT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCAGACAAGTGCCTCCTaGTGCCAGGACTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGQTSAS*CQDSGQ
Trigger: TTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCAGGGGCCATACCAGCTaGCTCTGGACGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCRGHTS*LWTPKA
Trigger: GGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCATGGGGCTGAAGTaGAGAGGGGCCATACCAGCT +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASMGLK*RGAIPA
Trigger: AGCTGGTATGGCCCCTCTGCACTTCAGCCCCATGGA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTGGCTGGCTGGCTTTTaGCGAGACACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPWLAGF*RDTSRQ
Trigger: TTGTCTGCTGGTGTCTCGGCAAAAGCCAGCCAGCCA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGGGAACACCAGAGGATaGCTCCTGCCCCACACCACC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLGNTRG*LLPHTT
Trigger: GGTGGTGTGGGGCAGGAGGCATCCTCTGGTGTTCCC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGGCGAAGGAGGGGCCTaGAGTCCAGGAGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGGEGGA*SPGGAE
Trigger: CTCTGCTCCTCCTGGACTGCAGGCCCCTCCTTCGCC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCGGACCATGGGGAGCCTaGTGGATGGTGAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCGPWGA*WMVRPL
Trigger: CAGGGGCCTCACCATCCAGCAGGCTCCCCATGGTCC...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCCGGACCACGGGGCTTaGTCCCTCCTCCACAGGACC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTPDHGA*SLLHRT
Trigger: GGTCCTGTGGAGGAGGGAGCAAGCCCCGTGGTCCGG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGAGAGGCTCCTCTTaGGTGAGTAGAGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSWRGSS*VSRGVG
Trigger: CCCCACCCCTCTACTCACCCAAGAGGAGCCTCTCCA...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCCAGCAGCTCTCACCTaGCCAGCCCACCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLPAALT*PAHLHV
Trigger: AACATGAAGGTGGGCTGGCCAGGTGAGAGCTGCTGG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389212.7
ENST00000449771.7
ENST00000547856.5
CDS-3UTR CCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTGTCCAGCGCAGCCCCTaGATGCAGCTCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSVQRSP*MQLGRW
Trigger: CCAGCGTCCGAGCTGCATCCAGGGGCTGCGCTGGAC...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LADQPQDLLPLVADVGAALASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...CGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCCACCAGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACAGGGTCAGTGTGGGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PTRSESFWRKLVATGSVWVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...CCACACTGACCCTGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp ACGCAGGAAATGACAGTTGTCTTCTCGCAGGATGATGGTGGCTGCCCGGGGTGCATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TQEMTVVFSQDDGGCPGCIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...GCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTCCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLGARPG*GAKQAS
Trigger: ACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCYPQLG*HSCCQE
Trigger: TTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATGGGGCTGAAGTGCAGAGGGGCCATACCAGCTGCCTCTGGACGCCCAAGGCCCTATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MGLKCRGAIPAASGRPRPYPQLG*HSCCQE
Trigger: TTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATA...GGGCCTTGGGCGTCCAGAGGCAGCTGGTATGGCCCCTCTGCACTTCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPARVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: IQGHPLADQPQDLLPLVAKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCTGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHSRYTR*FHEGSS
Trigger: GCTGGATCCCTCATGGAACCACCGGGTATACCGACT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGCATCCGCGCGGCTCTaGCCATCATTCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAASARL*PSFSSS
Trigger: AGAAGATGAGAATGATGGCCAGAGCCGCGCGGATGC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCATTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPLWLRQ*CSIRAA
Trigger: AGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAA...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPLSSWR*ETRLLS
Trigger: ACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGEILAT*LSSWRW
Trigger: CCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTC...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLEILAT*LSSWRW
Trigger: CCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTGGCCCGGCACACCCTaGCTTTCCCGGCTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASWPGTP*LSRLQV
Trigger: CACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCACGCCCACTCTGGGCTaGCCTGGAACATACTACTAT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCTPTLG*PGTYYY
Trigger: ATAGTAGTATGTTCCAGGCCAGCCCAGAGTGGGCGT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGGAGGCACATCTGGGTaGCATCAGGATCTTGGACCC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAGGTSG*HQDLGP
Trigger: GGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGAGGGTGGAGTCCCTaGAGCTTCCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPARGWSP*SFLGEL
Trigger: GAGCTCACCCAGGAAGCTCCAGGGACTCCACCCTCT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCCACGGCAAGGGAACTaGTTTGGTTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHPRQGN*FGYHCH
Trigger: ATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTGG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGTGAAGGGCCACGGCTaGCTGGCTGGCTTTTGCCGA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLVKGHG*LAGFCR
Trigger: TCGGCAAAAGCCAGCCAGCCAGCCGTGGCCCTTCAC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCTTTCTGTTGTGTCGCTaGGCTGGGCTCACCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARAFLLCR*AGLTLE
Trigger: CTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAA...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGCCCCCGTGGCACTTaGTTTCTGTTGTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGPRGT*FLLCRW
Trigger: CCAGCGACACAACAGAAACCAAGTGCCACGGGGGCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACATCCTGCCCGAGACTaGGGCAGCTGGGAGACCACC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSHPARD*GSWETT
Trigger: GGTGGTCTCCCAGCTGCCCCAGTCTCGGGCAGGATG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCACTCCACCCCGTCTGTaGGGAGGCGTGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLTPPRL*GGVALP
Trigger: AGGGAGGGCCACGCCTCCCCACAGACGGGGTGGAGT...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGAGAGAGGGGACAGCTaGCTCCAGGCGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSERGDS*LQAEML
Trigger: CAGCATCTCCGCCTGGAGCCAGCTGTCCCCTCTCTC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTCAAGGCAGAGCGTGGTaGGAGAAAGGGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPQGRAW*EKGEGA
Trigger: AGCACCCTCCCCTTTCTCCCACCACGCTCTGCCTTG...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCGGAGCGGACTACAGTTaGAAGAGCCGACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSGADYS*KSRLQC
Trigger: GCACTGGAGTCGGCTCTTCCAACTGTAGTCCGCTCC...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTCAGGGATCCTCCTCCTaGGTTCCCTTTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPQGSSS*VPFPPG
Trigger: CCCAGGAGGAAAGGGAACCCAGGAGGAGGATCCCTG...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp GGGATGGGGTGCCGGATCTCAGGCTCTGCCTTCCTTTaGTTCGGATGGAGCCTGAGAGAGAGGGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: GMGCRISGSAFL*FGWSLRERGQL
Trigger: CAGCTGTCCCCTCTCTCTCAGGCTCCATCCGAACAAAAGGAAGGCAGAGCCTGAGATCCGGCACCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPFSTPC*VVSPPA
Trigger: TGCCGGAGGGGACACTACTCAACATGGTGTTGAGAA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCACTCCTCGCTGTTGGTaGGTGGTGTCCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCTPRCW*VVSSAA
Trigger: GGCTGCGCTGGACACCACTCACCAACAGCGAGGAGT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGCTCCAGGCTCTCGCTaGAATCCAGGGACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTAPGSR*NPGTPR
Trigger: GCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGAGC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGCTCCAGGCTCTCGCTaGAATCCAGGGACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGAPGSR*NPGTPR
Trigger: GCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGAGC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGCTCCAGGCTCTCGCTaGAATCCAGGGACTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSAPGSR*NPGTPR
Trigger: GCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGAGC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACTCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHSSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPSSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACTGTCTTCTCGCAGGATaGTGGTGGCTGCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHCLLAG*WWLPGV
Trigger: CACCCCGGGCAGCCACCATCATCCTGCGAGAAGACA...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCGTTGGGCGCTGGGCATaGAGACCCTGTGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCVGRWA*RPCGSG
Trigger: TCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAAC...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACAGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: STSTTLPCSSSRMVFASTGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATCCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp ACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTCCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTKRRSLSPRDVATPRASPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...AGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCTTCCGGGCCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DLLPLVADVGAALLLAATFRAFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAA...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTTCCGGGCCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLFRAFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTLQGQH*VVWPAD
Trigger: ATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCAGGTTGGCGGTGGTaGCATCCCGCAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLPGWRW*HPADAG
Trigger: CCCAGCATCTGCGGGATGTCACCACCGCCAACCTGG...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQSFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTACCCGGTGGTTCCATaGGGGATCCAGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSYPVVP*GIQQPL
Trigger: GAGAGGCTGCTGGATCCCTCATGGAACCACCGGGTA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCACCACCACGGGGAGCTaGTGGTCACCCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALTTTGS*WSPWLA
Trigger: AGCCAGCCAGGGTGACCATCAGCTCCCCGTGGTGGT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGCTGGAGCTTCCTGGGTaGGCTCTGCCTCGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQLELPG*ALPRKR
Trigger: CCTCTTGCGAGGCAGAGCTCACCCAGGAAGCTCCAG...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCATTCACTTAGTGACCTaGGGTCTAAGCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCIHLVT*GLSPAV
Trigger: CACAGCTGGGCTTAGACCTCAGGTCACTAAGTGAAT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCTGACCAGAGCCCTGTaGAGCTCCCGCACTCGACTT +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQLTRAL*SSRTRL
Trigger: AAGTCGAGTGCGGGAGCTTCACAGGGCTCTGGTCAG...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCATCCTGGCCAGCTCTaGAGCCATCCATGGAAATGC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAHPGQL*SHPWKC
Trigger: GCATTTCCATGGATGGCTTCAGAGCTGGCCAGGATG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTAGGGAGCCCCGAGCCTaGGCCTTCGTCTCAGACGAA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASREPRA*AFVSDE
Trigger: TTCGTCTGAGACGAAGGCGCAGGCTCGGGGCTCCCT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR GCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCAGCGCAGCCCCTGGATaGAGCTCGGACGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLSAAPG*SSDAGA
Trigger: AGCACCAGCGTCCGAGCTGCATCCAGGGGCTGCGCT...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCGCTCTGTGGAGGCCTaGTCCAGGCTCTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLRSVEA*SRLSLK
Trigger: TTTCAGCGAGAGCCTGGAGCAGGCCTCCACAGAGCG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCGCTCTGTGGAGGCCTaGTCCAGGCTCTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTRSVEA*SRLSLK
Trigger: TTTCAGCGAGAGCCTGGAGCAGGCCTCCACAGAGCG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQRCRCS*LPALST
Trigger: GGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADQVASR*RCSCLP
Trigger: TGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTG...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSQVASR*RCSCLP
Trigger: TGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp AGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCAGGAGGAAGTCGCTTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SAELGAGHEDPVGQEEVASTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...AGCGACTTCCTCCTGACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTGCGCTCCTGCTCGCTaGCACCCGCAGGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSCAPAR*HPQAPH
Trigger: ATGTGGAGCCTGCGGGTGGCAGCGAGCAGGAGCGCA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGATGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCCTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSLGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGA +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHLLGQR*HHLSHG
Trigger: TCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLLLGQR*HHLSHG
Trigger: TCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTGGCTTCGGCAGTGGTaGAGCATCCGCGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSWLRQW*SIRAAL
Trigger: CAGAGCCGCGCGGATGCTGCACCACTGCCGAAGCCA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATCGGGTGCTCAGGGACTaGTCCGAGCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHRVLRD*SEHVEI
Trigger: GATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCG...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGGACATAAGCCCAGGTaGTGGCTGGACTCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSGHKPR*WLDSGC
Trigger: GCACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTCCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAPLCHVLPAAWSLPPHPPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...AGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: TVEEAPVVVRQLACQVLGEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...GCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACCCCAGGCCAAGGCCCTaGCCTTGCCACACACGGTAC +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHPRPRP*PCHTRY
Trigger: GTACCGTGTGTGGCAAGGGCAGGGCCTTGGCCTGGG...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTACCCAGTCTGGCCCGTaGCCAGCATGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSTQSGP*PAWGCF
Trigger: GAAGCAGCCCCATGCTGGGCACGGGCCAGACTGGGT...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGGATAGCACAGGACTaGCCTTGGCTGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLWIAQD*PWLSPL
Trigger: CAGAGGTGACAGCCAAGGGCAGTCCTGTGCTATCCA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCAACTGAGGCGAGGCTaGCCCCCTACCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSQLRRG*PPTRPG
Trigger: TCCAGGCCTGGTAGGGGGGCAGCCTCGCCTCAGTTG...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCGCAGCCATTCCTCTCTaGTTGACCTCCTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCAAIPL*LTSFQV
Trigger: TACCTGAAAGGAGGTCAAGCAGAGAGGAATGGCTGC...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACTGGCAGGGCAGCGCCTaGCAGGCAAGTCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADWQGSA*QASLLT
Trigger: AGTCAGGAGACTTGCCTGGCAGGCGCTGCCCTGCCA...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATGCCCAGGGCACCACATaGAGCAAGGGCCCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNAQGTT*SKGPVN
Trigger: GTTCACGGGGCCCTTGCTGCATGTGGTGCCCTGGGC...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCGCGCAGTGCCCGGCCTaGGAGGGTGAGCCCACATCA +
Preference number: 4 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTAQCPA*EGEPTS
Trigger: TGATGTGGGCTCACCCTCGCAGGCCGGGCACTGCGC...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCAGCCATCCATGGAAATaGACTCCGGACCACGGGGCT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSSHPWK*TPDHGA
Trigger: AGCCCCGTGGTCCGGAGTGCATTTCCATGGATGGCT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGGATGCAGGGCTCGGTaGAGAGGCTCCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTGCRAR*RGSSWV
Trigger: CACCCAAGAGGAGCCTCTCCACCGAGCCCTGCATCC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389212.7
ENST00000449771.7
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCCAGCAGCTCTCACCTaGCCAGCCCACCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSPAALT*PAHLHV
Trigger: AACATGAAGGTGGGCTGGCCAGGTGAGAGCTGCTGG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389212.7
ENST00000449771.7
ENST00000547856.5
CDS-3UTR CCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAVSDEV*AGGQQM
Trigger: CATCTGCTGGCCACCTGCCCAAACCTCATCCGAGAC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAACTTGGCTCCGGGAATaGACCCCAAGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSTWLRE*TPSPRA
Trigger: GGCCCTGGGACTTGGGGTCCATTCCCGGAGCCAAGT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATCATCCAGCAGCACCTaGCAGATTCCCACAACTTGG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPASSSST*QIPTTW
Trigger: CCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCAGTCGTGTTTCACATaGCAGAGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAQSCFT*QRAPSS
Trigger: GGATGAAGGTGCCCTCTGCCATGTGAAACACGACTG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AGGCTGTCACAGGCAGCTGCAGGGTCAACACTGAGTGGTCTGGCCGGCAGATGTACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: RLSQAAAGSTLSGLAGRCTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...ACATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCRAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACTACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLGARPG*GAKQAS
Trigger: ACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPGARPG*GAKQAS
Trigger: ACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GAAGGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGTATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EGDDRRGELGEGQSVYPVYPQLG*HSCCQE
Trigger: TTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATA...CACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLRVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGTCCAGCCATCCTCCTaGGCCAACGCTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQVQPSS*ANAAIT
Trigger: GGTGATGGCAGCGTTGGCCCAGGAGGATGGCTGGAC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACACCACGGGCATCTaGCTGCAGGCCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTHTTGI*LQANGI
Trigger: GATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCACACCACGGGCATCTaGCTGCAGGCCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLHTTGI*LQANGI
Trigger: GATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAACCTCCCCAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: SMRDPRLCHRRTRGFQPPQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...GGGAGGTTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTCGTGGTCCGTCAGCTaGCCTGCCAGGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASSWSVS*PARSLA
Trigger: TGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCAAGAGGCTCCAGTCGTaGTCCGTCAGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCKRLQS*SVSWPA
Trigger: GGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAAAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSMRDPRLCHRRTRGFQRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...TTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: WKWCRRAAQSWALGMKTLSRYTR*FHEGSS
Trigger: GCTGGATCCCTCATGGAACCACCGGGTATACCGACT...CAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCACAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGCATCCGCGCGGCTCTaGCCATCATTCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGASARL*PSFSSS
Trigger: AGAAGATGAGAATGATGGCCAGAGCCGCGCGGATGC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTTGTGGCTTCGGCAGTaGTGCAGCATCCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCLWLRQ*CSIRAA
Trigger: AGCCGCGCGGATGCTGCACCACTGCCGAAGCCACAA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCCACCAGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACAGGGTCAGTGTGGACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: PTRSESFWRKLVATGSVWTWLSS*RWETRL
Trigger: AAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGT...CCACACTGACCCTGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACACTGCTCCGAGCATGTaGAAATCCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHTAPSM*KSSPPG
Trigger: GCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGT...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAGCCCAGGTGCTGGCTaGACTCCGGGTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHSPGAG*TPGAQG
Trigger: TCCCTGAGCACCCGGAGTCCAGCCAGCACCTGGGCT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCACATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCATAAGCCCAGGTGCTaGCTGGACTCCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTHKPRC*LDSGCS
Trigger: TGAGCACCCGGAGTCCAGCCAGCACCTGGGCTTATG...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCGGGAGAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGARESSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCGGGAGAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLRESSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGRAWRGPVGIPGGSMRDVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...ATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARASGDCS*EEAVSC
Trigger: GCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCT...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGAGCAAGGCAAGAGGGTaGAGTCCCTGGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLSKARG*SPWSFL
Trigger: CAGGAAGCTCCAGGGACTCCACCCTCTTGCCTTGCT...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCAGCAAGGCAAGAGGGTaGAGTCCCTGGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGSKARG*SPWSFL
Trigger: CAGGAAGCTCCAGGGACTCCACCCTCTTGCCTTGCT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACCAGCAGACAATGGGTTaGATGAAAAGAAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PRRALPSCGQPVSILARHQQTMG*MKRKPP
Trigger: CGGGGGCTTTCTTTTCATCCAACCCATTGTCTGCTG...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGGACACCGGCCCCCGTaGCACTTGGTTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHGHRPP*HLVSVV
Trigger: CACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGAGGAGAAATGCTGGTaGAGGACACCGGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASEEKCW*RTPAPV
Trigger: CACGGGGGCCGGTGTCCTCCACCAGCATTTCTCCTC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCTGGGAGACCACCGGGTaGCTGCAGGGTGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLWETTG*LQGGLD
Trigger: GTCCAGACCACCCTGCAGCCACCCGGTGGTCTCCCA...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACGAGACTGGGGCAGCTaGGAGACCACCGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEERDWGS*ETTGWL
Trigger: CAGCCACCCGGTGGTCTCCCAGCTGCCCCAGTCTCG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGTGGCCTGGCCCCCTaGGCCGCAACTCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSSGLAP*AATLLA
Trigger: AGCTAGAAGAGTTGCGGCCCAGGGGGCCAGGCCACT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGAGTACTGTCCATCCTaGCCAGCTCTGAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGEYCPS*PALKPS
Trigger: GGATGGCTTCAGAGCTGGCCAGGATGGACAGTACTC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CCA 90 bp ATGAAGGGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGAGTCGGTATACCCGGTaGTTCCATGAGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: MKGMTGGESLARASRYTRSRYTR*FHEGSQ
Trigger: CTGGGATCCCTCATGGAACCACCGGGTATACCGACT...CCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCCCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR TCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCACTCCTCGCTGTTGGTaGGTGGTGTCCAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALTPRCW*VVSSAA
Trigger: GGCTGCGCTGGACACCACTCACCAACAGCGAGGAGT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCACTTCCGGTCTCGGATaGGGTTTGGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCTSGLG*GLGRWP
Trigger: TGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACATCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTSSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSSSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLSSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCAGAAGGGCCGGCGCCCTaGGAGGCTCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPEGPAP*EALSST
Trigger: GGTGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTC...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTCAGGAGGAAGTCGCTaGGGAATGTCTCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGSGGSR*GMSLLG
Trigger: ACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGTCAGGAGGAAGTCGCTaGGGAATGTCTCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVSGGSR*GMSLLG
Trigger: ACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGA...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHLQGQH*VVWPAD
Trigger: ATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAG...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCATCACCTGCAGAATTaGCCTTCACCAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGHHLQN*PSPAPA
Trigger: GGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCATCACCTGCAGAATTaGCCTTCACCAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSHHLQN*PSPAPA
Trigger: GGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTACCCGGTGGTTCCATaGGGGATCCAGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCYPVVP*GIQQPL
Trigger: GAGAGGCTGCTGGATCCCTCATGGAACCACCGGGTA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTTACCCGGTGGTTCCATaGGGGATCCAGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTYPVVP*GIQQPL
Trigger: GAGAGGCTGCTGGATCCCTCATGGAACCACCGGGTA...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCCACATCCATGGGGCTaGAGTGCAGAGGGGCCATAC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCPHPWG*SAEGPY
Trigger: GTATGGCCCCTCTGCACTTCAGCCCCATGGATGTGG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCGAGCCAGGCAGCATGTaGGCAAGGAGAAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGEPGSM*ARRSGG
Trigger: ACCTCCGCTTCTCCTTGCTCACATGCTGCCTGGCTC...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCACATCACGGGTTGTTaGACTGCTCTGCCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQHITGC*TALPLA
Trigger: GGCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTG...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCCGCTCTGTGGAGGCCTaGTCCAGGCTCTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCRSVEA*SRLSLK
Trigger: TTTCAGCGAGAGCCTGGAGCAGGCCTCCACAGAGCG...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DLLPLVADVGAALLLAATTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTCTGTATACCGGTTCCTaGCTGGGGTTGGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PAPLCHVLPAAWSLPPHPLYTGS*LGLGVG
Trigger: CCCGACCCCCAACCCCAGGCAGGAACCGGTATACAG...AGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHSAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSLGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSLGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQTFTST*PLVQPS
Trigger: GGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTACCTTCACCAGCACCTaGCCCTTGGTCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASTFTST*PLVQPS
Trigger: GGATGGCTGGACCAAGGGGCAGGTGCTGGTGAAGGT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCCACGGGCATCTGGCTaGAGGCCAATGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSPRASG*RPMASP
Trigger: AGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: GMTGGESLARASRYTRWFCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGTCCGTCAGCTGGCCTaGCAGGTCCTTGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALVRQLA*QVLGTH
Trigger: GTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGAC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGGESLARASRYTRWFHEELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...CTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR GCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTGGCTGGACTCCGGGTaGTCAGGGACTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSWLDSG*SGTAPS
Trigger: GCTCGGAGCAGTCCCTGAGCACCCGGAGTCCAGCCA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACCGGCTGCAAGTGCCTaGTCCAGCTCCAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEPAASA*SSSSPS
Trigger: GCTGGGACTGGAGCTGGAGCAGGCACTTGCAGCCGG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTGCCTCCACACTGCCTaGTCCAGGGACTCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHCLHTA*SRDSSP
Trigger: TGGACTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGATCACAGGGGATGGCTaGCTCCACACTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQITGDG*LHTACS
Trigger: GGAGCAGGCAGTGTGGAGGCAGCCATCCCCTGTGAT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTGGCCCGCAGCCCCACTaGCTGCTGTTGGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSGPQPH*LLLEES
Trigger: GCTTTCTTCCAACAGCAGGCAGTGGGGCTGCGGGCC...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTTCCTGGGTGAGCTCTaGCTCGCAAGAGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHFLGEL*LARGVL
Trigger: CAGGACGCCTCTTGCGAGGCAGAGCTCACCCAGGAA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTCTTGGCTGTCACCTCTaGTACAGAGGCAGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPALGCHL*YRGRSY
Trigger: GTAGCTCCTGCCTCTGTAGCAGAGGTGACAGCCAAG...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTGGATAGCACAGGACTaGCCTTGGCTGTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGWIAQD*PWLSPL
Trigger: CAGAGGTGACAGCCAAGGGCAGTCCTGTGCTATCCA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGTTACCACTGCCATCTaGTGCACCTCAGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAVTTAI*CTSVSP
Trigger: GGGAGAGACTGAGGTGCAGCAGATGGCAGTGGTAAC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCTGGTTTGGTTACCACTaGCATCTGCTGCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAWFGYH*HLLHLS
Trigger: ACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCA...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTTCCAGATGCTTCCGTaGTTCTCCTGTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGFQMLP*FSCVPT
Trigger: GGTGGGGACACAGGAGAAGCACGGAAGCATCTGGAA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAGCCTGGCCACAGCCTaGCTCAGGCCTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHSLATA*LRPSQG
Trigger: TCCCTGTGAAGGCCTGAGGCAGGCTGTGGCCAGGCT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCGCTGTTGGTGAGTaGTGTCCAGCGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTLAVGE*CPAQPL
Trigger: CAGGGGCTGCGCTGGACACCACTCACCAACAGCGAG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTCGCTGTTGGTGAGTaGTGTCCAGCGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLLAVGE*CPAQPL
Trigger: CAGGGGCTGCGCTGGACACCACTCACCAACAGCGAG...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACACTTGGCTCCGGGAATaGACCCCAAGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHTWLRE*TPSPRA
Trigger: GGCCCTGGGACTTGGGGTCCATTCCCGGAGCCAAGT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCAGTCGTGTTTCACATaGCAGAGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAQSCFT*QRAPSS
Trigger: GGATGAAGGTGCCCTCTGCCATGTGAAACACGACTG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGGGCATCTCGGTCCTaGAAGGCCCAGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTWASRS*KAQSCF
Trigger: GAAACACGACTGGGCCTTCCAGGACCGAGATGCCCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATACAGGGCCACCCACTGGCTGACCAGCCGCAAGATCTGCTGCCTCTTGTTGCAACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: IQGHPLADQPQDLLPLVATELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...TGCAACAAGAGGCAGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: PAPLCHVLPAAWSLPPHPRAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...AGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp CCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: PWPPTEALGSSLGCQTSLRAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...CAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACTACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACACCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCLMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCTCTGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AWRGPVGIPGGSMRDPRLWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...GAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSSRYTR*FHEGSS
Trigger: GCTGGATCCCTCATGGAACCACCGGGTATACCGACT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGGAGGGGAGAGCTTaGCGAGGGCCAGTCGGTATA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHQEGRA*RGPVGI
Trigger: TATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGGCATCCGCGCGGCTCTaGCCATCATTCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWASARL*PSFSSS
Trigger: AGAAGATGAGAATGATGGCCAGAGCCGCGCGGATGC...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAGAGGCACAGGGTTGTaGCTTCGGCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSRGTGL*LRQWCS
Trigger: GCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGAGGCACAGGGTTGTaGCTTCGGCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSRGTGL*LRQWCS
Trigger: GCTGCACCACTGCCGAAGCCACAACCCTGTGCCTCT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGLSSWR*ETRLLS
Trigger: ACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHTWLSS*RWETRL
Trigger: AAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGTGGCATCAGGATCTTaGACCCAGTCTGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASVASGS*TQSGPC
Trigger: GCACGGGCCAGACTGGGTCCAAGATCCTGATGCCAC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGGACGAGCTCAAGTGTaGAAAAGCGGGGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGGRAQV*KSGDCS
Trigger: ACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGAAGACCCCAGAAGCCTaGCCCAACAGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQKTPEA*PNRPGR
Trigger: TCGTCCTGGCCTGTTGGGCCAGGCTTCTGGGGTCTT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGTCCCTGGAGCTTCCTaGGTGAGCTCTGCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSVPGAS*VSSASQ
Trigger: TTGCGAGGCAGAGCTCACCCAGGAAGCTCCAGGGAC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGCTCTGACCCTTTCTaGAAGCAGCAGGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGSDPF*KQQACV
Trigger: TACACAGGCCTGCTGCTTCCAGAAAGGGTCAGAGCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGGCTGCAGGGTGGTCTaGACTGTAAAGCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESGCRVV*TVKLMV
Trigger: GACCATCAGCTTTACAGTCCAGACCACCCTGCAGCC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCACAAACTCCCAGCATaGGGCCACCGTAACATGGAG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGHKLPA*GHRNME
Trigger: CTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATTCCTTTTGTTCGGATaGAGCCTGAGAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: STESLAQLWPACEYLGPAFLLFG*SLRERG
Trigger: TCCCCTCTCTCTCAGGCTCCATCCGAACAAAAGGAA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCAAATCTTGTGACTATTaGGAAGGAGAGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSKSCDY*EGEQPE
Trigger: CTCTGGCTGCTCTCCTTCCCAATAGTCACAAGATTT...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGCGGTTCCCACTGCCTaGAGTACTGTCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASAVPTA*STVHPG
Trigger: GCCAGGATGGACAGTACTCCAGGCAGTGGGAACCGC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR TCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWFSTPC*VVSPPA
Trigger: TGCCGGAGGGGACACTACTCAACATGGTGTTGAGAA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLFSTPC*VVSPPA
Trigger: TGCCGGAGGGGACACTACTCAACATGGTGTTGAGAA...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACACTTCCGGTCTCGGATaGGGTTTGGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHTSGLG*GLGRWP
Trigger: TGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PWPPTEALGSSLGCQTSLSSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...CAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR TCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCTCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLSSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR TCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp ACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGGTTCCGGGCCACCCACTGGCTaGCCAGCCGCAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: TEALGSSLGCQTSLYTGSGPPTG*PAARSA
Trigger: AGCAGATCTTGCGGCTGGTCAGCCAGTGGGTGGCCC...GGAACCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTTCCGGGCCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLFRAFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTGCAGGGTCAACACTaGGTGGTCTGGCCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLLQGQH*VVWPAD
Trigger: ATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAG...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGAATGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAAGCTTCCGGACTTTGTaGGGCAGCCGCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GMSLLGHEHWNLVPWPPTSFRTL*GSRSQV
Trigger: CACCTGGGAGCGGCTGCCTCACAAAGTCCGGAAGCT...TGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCCCGCTGGTTGTCAATaGCCTTCAGCTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPPAGCQ*PSAAGH
Trigger: ATGTCCAGCAGCTGAAGGTCATTGACAACCAGCGGG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGCTCACCCTAGAGTCTaGAGAACGGTGAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSAHPRV*RTVKGH
Trigger: GTGGCCCTTCACCGTTCTTCAGACTCTAGGGTGAGC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCGGCTTTTTAAAGGACTaGTCTAGGGCCACACTCCCT +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLGFLKD*SRATLP
Trigger: AGGGAGTGTGGCCCTAGATCAGTCCTTTAAAAAGCC...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCAGCTTCGGGGCCGGTaGATCCTTCTCAACACCATG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTQLRGR*ILLNTM
Trigger: CATGGTGTTGAGAAGGATGCACCGGCCCCGAAGCTG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCGCTCTGTGGAGGCCTaGTCCAGGCTCTCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTRSVEA*SRLSLK
Trigger: TTTCAGCGAGAGCCTGGAGCAGGCCTCCACAGAGCG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACCAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTGTGGCCACCCAGTACTaGAGCTCATTGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTVATQY*SSLKRR
Trigger: GCGCCGCTTCAATGAGCTGCAGTACTGGGTGGCCAC...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAAGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GGSMRDPRLCHRRTRGFQELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...TTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCGGGTGCTCAGGGACTaGTCCGAGCATGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCRVLRD*SEHVEI
Trigger: GATTTCCACATGCTCGGAGCAGTCCCTGAGCACCCG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TTKRRSLSPRDVATPRASFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...AGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTTTCCCGGCTGCAAGTaGCTGCTCCAGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTFPGCK*LLQLQS
Trigger: GGACTGGAGCTGGAGCAGGCACTTGCAGCCGGGAAA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGTTCCGGGCCTTCATCTGAGGAGATGCATTCCCACAGCCATTCTCCAACCTGTCCTGGCTTTCCCGGCTaGAAGTGCCTGCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSGPSSEEMHSHSHSPTCPGFPG*KCLLQL
Trigger: GAGCTGGAGCAGGCACTTGCAGCCGGGAAAGCCAGG...ACAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTGGCTGCCTCCACACTaGCTGCTCCAGGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSWLPPH*LLQGLE
Trigger: CTCGAGTCCCTGGAGCAGGCAGTGTGGAGGCAGCCA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGCGCAGCCCCACTGCCTaGTGTTGGAAGAAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQRSPTA*CWKKAV
Trigger: CACAGCTTTCTTCCAACAGCAGGCAGTGGGGCTGCG...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCGTATGACCAGAGCTTaGTGGGACCATTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGARMTRA*WDHSQH
Trigger: GTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGGACGCCCAAGGCCCTaGAGCCTCAATACCTACTCA +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQGRPRP*SLNTYS
Trigger: TGAGTAGGTATTGAGGCTGCAGGGCCTTGGGCGTCC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCACCACTGCCATCTGCTaGACCTCAGTCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTTTAIC*TSVSPS
Trigger: TGAGGGAGAGACTGAGGTGCAGCAGATGGCAGTGGT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAGACCACCGGGTGGCTaGAGGGTGGTCTGGACTGTA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHRPPGG*RVVWTV
Trigger: TACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGCTCAAAAGCCATCCTaGCCGAGACTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHAQKPS*PRLGQL
Trigger: CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGCTGTGTCCTCTTGCCTaGCCTGGGCACCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQLCPLA*PGHHSP
Trigger: AGGAGAATGGTGCCCAGGGCAGGCAAGAGGACACAG...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGTGTCCTCTTGCCTaGCCTGGGCACCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHLCPLA*PGHHSP
Trigger: AGGAGAATGGTGCCCAGGGCAGGCAAGAGGACACAG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAAAATGGGAGCCCCTaGACACAGCCTGGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCQNGSP*TQPGLL
Trigger: TAGCAGCCCAGGCTGTGTGCAGGGGCTCCCATTTTG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCCCGGATCTCAGGCTCTaGCTTCCTTTTGTTCGGATG +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSPDLRL*LPFVRM
Trigger: CATCCGAACAAAAGGAAGGCAGAGCCTGAGATCCGG...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCAGAACGGGCTTCGCCTaGGGAGGAGAAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCRTGFA*GGEEAS
Trigger: ACTGGCTTCTTCTCCTCCGCAGGCGAAGCCCGTTCT...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCACGGGTTGTTGAACTaGTCTGCCCCTTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQHGLLN*SAPCLT
Trigger: AGTCAGGCAAGGGGCAGAGCAGTTCAACAACCCGTG...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAGTGGCGTCCATTGTCTaGTGGAGAAAGCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTVASIV*WRKPRL
Trigger: GAGCCTGGGCTTTCTCCAGCAGACAATGGACGCCAC...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAGGGGATCCGGAGGGTaGCAGTGGGTAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHRGSGG*QWVSPG
Trigger: ACCTGGACTTACCCACTGGCACCCTCCGGATCCCCT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAACGTGCGGTTCCCACTaGCTGGAGTACTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSTCGSH*LEYCPS
Trigger: GGATGGACAGTACTCCAGGCAGTGGGAACCGCACGT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCATGCAGCTCGGACGCTaGTGCTCCAGCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCMQLGR*CSSSSW
Trigger: CCAGCTGCTGCTGGAGCACCAGCGTCCGAGCTGCAT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSVSDEV*AGGQQM
Trigger: CATCTGCTGGCCACCTGCCCAAACCTCATCCGAGAC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGVSDEV*AGGQQM
Trigger: CATCTGCTGGCCACCTGCCCAAACCTCATCCGAGAC...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHVSDEV*AGGQQM
Trigger: CATCTGCTGGCCACCTGCCCAAACCTCATCCGAGAC...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCACTTGGCTCCGGGAATaGACCCCAAGTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCTWLRE*TPSPRA
Trigger: GGCCCTGGGACTTGGGGTCCATTCCCGGAGCCAAGT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGTCATCCAGCAGCACCTaGCAGATTCCCACAACTTGG +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLSSSST*QIPTTW
Trigger: CCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGA...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTGGGCATCTCGGTCCTaGAAGGCCCAGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCWASRS*KAQSCF
Trigger: GAAACACGACTGGGCCTTCCAGGACCGAGATGCCCA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACCGAGTTGGAGAGGTaGGCCACAGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTELER*ATALMC
Trigger: GCACATCAAGGCTGTGGCCCACCTCTCCAACTCGGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATCTCGCTTCACCGAGTTaGAGAGGTGGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNLASPS*RGGPQP
Trigger: AGGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAG...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATGTGCCCTTGTCCCCCTaGCTGAACAACACGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNVPLSP*LNNTVP
Trigger: AGGGACCGTGTTGTTCAGCCAGGGGGACAAGGGCAC...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAATACCGGTTCCTGCCTaGGGTTGGGGGTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEIPVPA*GWGSGR
Trigger: CCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAT...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: EVVQKGSAELGAGHEDPVWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...CACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPERAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PAPLCHVLPAAWSLPPHPPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...AGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: STSTTLPCSSSRMVFASTYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCCATTCTCCAACCTGTaGCATCGCCGCCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTPFSNL*HRRLSG
Trigger: GCCAGAGAGGCGGCGATGCCACAGGTTGGAGAATGG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACAGGGGCTCGTCCTGGTTaGGGAGCCAAACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: STSTTLPCSSSRMVFASTGARPG*GAKQAS
Trigger: ACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCC...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSRVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAACCTCCCATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SMRDPRLCHRRTRGFQPPISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...GGGAGGTTGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLSRYTR*FHEGSS
Trigger: GCTGGATCCCTCATGGAACCACCGGGTATACCGACT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPLSSWR*ETRLLS
Trigger: ACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GATACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DTVEEAPVVVRQLACQVLLSSWR*ETRLLS
Trigger: ACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAG...AAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTWLSS*RWETRL
Trigger: AAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTACCTGGCTGTCCTCGTaGAGGTGGGAAACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASTWLSS*RWETRL
Trigger: AAGCCGAGTTTCCCACCTCCACGAGGACAGCCAGGT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGTGGGTTGACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCGAAATCCTCGCCACCTaGCTGTCCTCGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWVDNKETLIEPQRCGHTEILAT*LSSWRW
Trigger: CCACCTCCACGAGGACAGCCAGGTGGCGAGGATTTC...GGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGTCAACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAACTGCTCCGAGCATGTaGAAATCCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSTAPSM*KSSPPG
Trigger: GCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCGGGAGAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHRESSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCGGGAGAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPRESSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGGTTCCCCCAGCCCCTCCTCATaGCTCCAGCTCTCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TEALGSSLGCQTSLYTGSPSPSS*LQLSGE
Trigger: CTCTCCCGAGAGCTGGAGCCATGAGGAGGGGCTGGG...GGAACCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGTCATTCGTTATTCCTaGCTCGGGTCCACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPVIRYS*LGSTPR
Trigger: CCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGAATAAACTGCAGGCCTaGCTGGACAACAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSTESLAQLWPACEYLGPNKLQA*LDNKAR
Trigger: TCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATT...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCCTGGAGGCACATCTaGGTGGCATCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHPWRHI*VASGSW
Trigger: CCAAGATCCTGATGCCACCCAGATGTGCCTCCAGGG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACATACCAGCTGCCTCTaGACGCCCAAGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEHTSCL*TPKALQ
Trigger: CTGCAGGGCCTTGGGCGTCCAGAGGCAGCTGGTATG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACCACGGCTGGCTGGCTaGCTTTTGCCGAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEPRLAG*LLPRHQ
Trigger: CTGGTGTCTCGGCAAAAGCCAGCCAGCCAGCCGTGG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTAGGGCCACGGCTGGCTaGCTGGCTTTTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSRATAG*LAFAET
Trigger: TGTCTCGGCAAAAGCCAGCCAGCCAGCCGTGGCCCT...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGGACACCGGCCCCCGTaGCACTTGGTTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALGHRPP*HLVSVV
Trigger: CACAACAGAAACCAAGTGCCACGGGGGCCGGTGTCC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGGGCACCATTCTCCTaGCAAGGTCTCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPWAPFS*QGLSQQ
Trigger: CTGTTGGGAGAGACCTTGCCAGGAGAATGGTGCCCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTCCTCTTGCCTGCCCTaGGCACCATTCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSSSCLP*APFSWQ
Trigger: TTGCCAGGAGAATGGTGCCCAGGGCAGGCAAGAGGA...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACACACCACCCCACGCTTaGGCAGTCAGGGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHTPPHA*AVRETE
Trigger: TTCTGTCTCCCTGACTGCCCAAGCGTGGGGTGGTGT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTTCCTTTTGTTCGGATaGAGCCTGAGAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGFLLFG*SLRERG
Trigger: TCCCCTCTCTCTCAGGCTCCATCCGAACAAAAGGAA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCAAGGAGAAGCGGAGGTaGGGGCCCGCAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLKEKRR*GPAGGK
Trigger: CTTCCCTCCTGCGGGCCCCCACCTCCGCTTCTCCTT...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGCGCACTCGACTTCAGTaGCGTCCATTGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQRTRLQ*RPLSAG
Trigger: TCCAGCAGACAATGGACGCCACTGAAGTCGAGTGCG...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp TCAGGGAAAGTGTCCCGTGTCACTGCACATCACGGGTaGTTGAACTGCTCTGCCCCTTGCCTGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGKVSRVTAHHG*LNCSAPCLTAA
Trigger: GGCTGCAGTCAGGCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTGCAGTGACACGGGACACTTTCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAATCCTCCTCCATCTCATaGGTTCTCACGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPESSSIS*VLTGSG
Trigger: GCCCGAGCCCGTGAGAACTCATGAGATGGAGGAGGA...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTCAGGAGGAAGTCGCTaGGGAATGTCTCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTSGGSR*GMSLLG
Trigger: ACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ACAGCAGGGATGCAGTTCATGGAAACCACTGTCAGGCCTCTGCTGGCAGGGCAGTCAGGAGGAAGTCGCTaGGGAATGTCTCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TAGMQFMETTVRPLLAGQSGGSR*GMSLLG
Trigger: ACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGA...CTGCCCTGCCAGCAGAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACCCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACCCTCAGCAGGTTGCTaGGTCGGGTGTCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPPSAGC*VGCPCP
Trigger: TGGGCAGGGACACCCGACTCAGCAACCTGCTGAGGG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCATCACCTGCAGAATTaGCCTTCACCAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSHHLQN*PSPAPA
Trigger: GGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGTGTGGTTTCCCTCATaGATGAAGGTCATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QPVSILARHTLAFPAASAVWFPS*MKVMSL
Trigger: CAAAGACATGACCTTCATTCATGAGGGAAACCACAC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGCCCACCTCCCAGTATaGAGCTATAGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLAHLPV*SYRFTR
Trigger: CCTAGTGAATCTATAGCTTCATACTGGGAGGTGGGC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405493.6
CDS-3UTR TCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTGGCCTTCTTGCAGCTaGGACACAAAATGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCWPSCS*DTKWEP
Trigger: GGGCTCCCATTTTGTGTCTCAGCTGCAAGAAGGCCA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGGCTTTTTAAAGGACTaGTCTAGGGCCACACTCCCT +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSGFLKD*SRATLP
Trigger: AGGGAGTGTGGCCCTAGATCAGTCCTTTAAAAAGCC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGGGAAAGGGCATGGCTaGTACACATCCAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAGKGHG*YTSSYF
Trigger: GAAGTAACTGGATGTGTATCAGCCATGCCCTTTCCC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCSTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATTGCAGACGTAGGTGCTaGGCTCCTGCTCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WPPTEALGSSLGCQTSLYCRRRC*APARCH
Trigger: GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCA...ATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACTTGGATGGCACAGCTaGTGCCAGGAAGGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEELGWHS*CQEGAR
Trigger: ACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACTCCTGGGCCAACGCTaGCATCACCTCTCTCACGGA +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEELLGQR*HHLSHG
Trigger: TCCGTGAGAGAGGTGATGGCAGCGTTGGCCCAGGAG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: MTGGESLARASRYTRWFHANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...ATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGAGGTCCTCCTTAGCTaGCAGTCATCACAGGGGATG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASEVLLS*QSSQGM
Trigger: CATCCCCTGTGATGACTGGCAGCTAAGGAGGACCTC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGTGGAAAAGCGGGGATTaGAGTTGGGAAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ARQVPPAARTQGNSKARGWKSGD*SWEEAV
Trigger: GACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCA...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCTCCATGGGGCTGAAGTaGAGAGGGGCCATACCAGCT +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLSMGLK*RGAIPA
Trigger: AGCTGGTATGGCCCCTCTGCACTTCAGCCCCATGGA...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTTGGCTGTCACCTCTaGTACAGAGGCAGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTLGCHL*YRGRSY
Trigger: GTAGCTCCTGCCTCTGTAGCAGAGGTGACAGCCAAG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTGGTTTGGTTACCACTaGCATCTGCTGCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWWFGYH*HLLHLS
Trigger: ACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTAGACCACCGGGTGGCTaGAGGGTGGTCTGGACTGTA +
Preference number: 4 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSRPPGG*RVVWTV
Trigger: TACAGTCCAGACCACCCTGCAGCCACCCGGTGGTCT...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCTCAAAAGCCATCCTaGCCGAGACTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEAQKPS*PRLGQL
Trigger: CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGC...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCAACTGCTCTGCCCCTTaGCTGACTGCAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTNCSAP*LTAAPQ
Trigger: CTGTGGGGCTGCAGTCAGGCAAGGGGCAGAGCAGTT...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGACCTTGGGCAAACCTaGCTGTGCCTCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGDLGQT*LCLSFF
Trigger: AAAGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTTTATTTCTTCCCTCTaGGCCATCACACGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGFISSL*AITRAV
Trigger: AACCGCACGTGTGATGGCGCAGAGGGAAGAAATAAA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTVSDEV*AGGQQM
Trigger: CATCTGCTGGCCACCTGCCCAAACCTCATCCGAGAC...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCATCCAGCAGCACCTaGCAGATTCCCACAACTTGG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLSSSST*QIPTTW
Trigger: CCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTGGGCATCTCGGTCCTaGAAGGCCCAGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTWASRS*KAQSCF
Trigger: GAAACACGACTGGGCCTTCCAGGACCGAGATGCCCA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTGGGCATCTCGGTCCTaGAAGGCCCAGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALWASRS*KAQSCF
Trigger: GAAACACGACTGGGCCTTCCAGGACCGAGATGCCCA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCACCAGCCCCTTGCCATaGGTCACCACGTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCTSPLP*VTTLTD
Trigger: ATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGT...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCAGGGCAGCGCAGAGTTaGGCGCTGGGCATGAAGACC +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLRAAQS*ALGMKT
Trigger: GGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCT...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTACTTTATCCCCAACTTaGATGGCACAGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESTLSPT*MAQLLP
Trigger: TGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGT...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTRVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGGGTCAACACTGAGTaGTCTGGCCGGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSRVNTE*SGRQMS
Trigger: TGACATCTGCCGGCCAGACCACTCAGTGTTGACCCT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTTGACAGATCCCTTCCAGATAATGTACCACGAAGTGCCCTTGTCCCCCTGGCTCACACCACGGGCATCTaGCTGCAGGCCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: VDRSLPDNVPRSALVPLAHTTGI*LQANGI
Trigger: GATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG...AGCCAGGGGGACAAGGGCACTTCGTGGTACATTATCTGGAAGGGATCTGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGLMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGALMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACTGTTGAAGAGGCTCCAGTCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: TVEEAPVVVRQLACQVLGLMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...GCCAAGGACCTGGCAGGCCAGCTGACGGACCACGACTGGAGCCTCTTCAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: EGRAWRGPVGIPGGSMRDLMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...ATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACCAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACAGCTGGTCAGGGTGTaGGATCAGCTCATGCACTTC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSQLVRV*DQLMHF
Trigger: GAAGTGCATGAGCTGATCCCACACCCTGACCAGCTG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGGCCTGCCAGGTCCTTaGCACTCACCAGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FAMFFQPHGLCLHILDDTGLPGP*HSPGPA
Trigger: GGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCC...CGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCAGTCGGTATACCCGGTaGTTCCATGAGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCSRYTR*FHEGSS
Trigger: GCTGGATCCCTCATGGAACCACCGGGTATACCGACT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCTGTCCTCGTGGAGGTaGGAAACTCGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASLSSWR*ETRLLS
Trigger: ACTCAGAAGCCGAGTTTCCCACCTCCACGAGGACAG...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCACTGCTCCGAGCATGTaGAAATCCTCGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLTAPSM*KSSPPG
Trigger: GCCAGGTGGCGAGGATTTCCACATGCTCGGAGCAGT...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGCGGGAGAGTTCCCGCTaGTTGTCAATGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQRESSR*LSMTFS
Trigger: GCTGAAGGTCATTGACAACCAGCGGGAACTCTCCCG...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACAACTGCAGGCCTGGCTaGACAACAAAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHNCRPG*TTKPEA
Trigger: TGCCTCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCCCACTGCCTGCTGTTaGAAGAAAGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESPTACC*KKAVER
Trigger: TCTTTCCACAGCTTTCTTCCAACAGCAGGCAGTGGG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCACGCCCACTCTGGGCTaGCCTGGAACATACTACTAT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTTPTLG*PGTYYY
Trigger: ATAGTAGTATGTTCCAGGCCAGCCCAGAGTGGGCGT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGGACGAGCTCAAGTGTaGAAAAGCGGGGATTGCAGT +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLGRAQV*KSGDCS
Trigger: ACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAAAGACCCCAGAAGCCTaGCCCAACAGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEKTPEA*PNRPGR
Trigger: TCGTCCTGGCCTGTTGGGCCAGGCTTCTGGGGTCTT...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTTCCTGGAAGTCTGTTaGGCCTCAACAAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHFLEVC*ASTSDG
Trigger: CCCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGGCTCTGACCCTTTCTaGAAGCAGCAGGCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASGSDPF*KQQACV
Trigger: TACACAGGCCTGCTGCTTCCAGAAAGGGTCAGAGCC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGGCTGCAGGGTGGTCTaGACTGTAAAGCTGATGGTC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSGCRVV*TVKLMV
Trigger: GACCATCAGCTTTACAGTCCAGACCACCCTGCAGCC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGCAGAGGAAAGAAACTaGGGCCAGGCAGACACCTTC +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGAEERN*GQADTF
Trigger: GAAGGTGTCTGCCTGGCCCCAGTTTCTTTCCTCTGC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCTCCCTGAATCTGCACTaGAGTTGGCTCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCSLNLH*SWLFPS
Trigger: GGAGGGGAAGAGCCAACTCCAGTGCAGATTCAGGGA...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCCTTATCTACTCCAATaGCCCAACTATGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSPYLLQ*PNYAPP
Trigger: AGGAGGAGCATAGTTGGGCCATTGGAGTAGATAAGG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCTCCGGAGGGTGCCAGTaGGTAAGTCCAGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLSGGCQ*VSPGTV
Trigger: CACTGTACCTGGACTTACCCACTGGCACCCTCCGGA...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCATGGGGAAAGGGCATaGCTGATACACATCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAHGERA*LIHIQL
Trigger: TAACTGGATGTGTATCAGCCATGCCCTTTCCCCATG...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR CAA 72 bp TTCTCCTGTGTCCCCACCCACGGCAAGGGAACTGGTTaGGTTACCACTGCCATCTGCTGCACCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FSCVPTHGKGTG*VTTAICCTSVS
Trigger: AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTGGGTGGGGACACAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
3UTR CAA 72 bp CCCTTGTCCCCCTGGCTGAACAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGCAGAACAGCCGCTAAT +
Preference number: 4 (lower is better)
Translates to: PLSPWLNNTVPA*LCGSKSRTAAN
Trigger: ATTAGCGGCTGTTCTGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTCAGCCAGGGGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCAGGAGGAAGTCGCTaGGGAATGTCTCTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSGGSR*GMSLLG
Trigger: ACCCAACAGAGACATTCCTCAGCGACTTCCTCCTGA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTTCCGGGCCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTFRAFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCATCACCTGCAGAATTaGCCTTCACCAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLHHLQN*PSPAPA
Trigger: GGCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATG...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp AGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: SRYTRWFHEGSQALSQANALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...GTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR TCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTAGAGAGGACTTCGTATaGCCAGAGCTTGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSREDFV*PELAGT
Trigger: GGTCCCAGCAAGCTCTGGTCATACGAAGTCCTCTCT...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTGGCCTTCTTGCAGCTaGGACACAAAATGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTWPSCS*DTKWEP
Trigger: GGGCTCCCATTTTGTGTCTCAGCTGCAAGAAGGCCA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACTCGCCTGCACATGGGTaGTTCCCAAAACTACCAGCA +
Preference number: 4 (lower is better)
Translates to: SWLFPSRFQERTTVGRADSPAHG*FPKLPA
Trigger: TGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGA...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAGCAGACACCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTADTFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGTGTCTGC...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCGCAGCAAGGGCCCCGTaGACACCTATCAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLAARAP*TPIRDP
Trigger: TGGGTCTCTGATAGGTGTTCACGGGGCCCTTGCTGC...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCAAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPRCRCS*LPALST
Trigger: GGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCT...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACAAAATCATCTCCCTCATaGAGGGTGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: STSTTLPCSSSRMVFASTKSSPS*RVVTSP
Trigger: GGGGCTGGTGACCACCCTGCATGAGGGAGATGATTT...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RSAASCCRRRCCAPARCHIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...GTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: STSTTLPCSSSRMVFASTSTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALSAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACGCCTCTCTGGCCACTaGTCCCTCAGCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPRLSGH*SLSRLL
Trigger: CAGCAACCTGCTGAGGGAGCAGTGGCCAGAGAGGCG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GTTGACAGATCCCTTCCAGATAATGTACCACGAAGTGCCCTTGTCCCCCTGGCTGCTGTCACAGGCAGCTaGAGGGTCAACACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VDRSLPDNVPRSALVPLAAVTGS*RVNTEW
Trigger: CCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGC...AGCCAGGGGGACAAGGGCACTTCGTGGTACATTATCTGGAAGGGATCTGTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCCCACGGGCATCTGGCTaGAGGCCAATGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: PPTEALGSSLGCQTSLYTPRASG*RPMASP
Trigger: AGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGG...GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GTCAATGACCTTCAGCTGCTGGACATAAGCCCAGGTGCTGGCTGGACTCCGGGTTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: VNDLQLLDISPGAGWTPGCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...ACCCGGAGTCCAGCCAGCACCTGGGCTTATGTCCAGCAGCTGAAGGTCATTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACGCAGCCCCACTGCCTaGTGTTGGAAGAAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPERSPTA*CWKKAV
Trigger: CACAGCTTTCTTCCAACAGCAGGCAGTGGGGCTGCG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCGTATGACCAGAGCTTaGTGGGACCATTCTCAACAC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLRMTRA*WDHSQH
Trigger: GTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGTTACCACTGCCATCTaGTGCACCTCAGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHVTTAI*CTSVSP
Trigger: GGGAGAGACTGAGGTGCAGCAGATGGCAGTGGTAAC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCTTCCAGATGCTTCCGTaGTTCTCCTGTGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLFQMLP*FSCVPT
Trigger: GGTGGGGACACAGGAGAAGCACGGAAGCATCTGGAA...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTGGCTGGCTGGCTTTTaGCGAGACACCAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALWLAGF*RDTSRQ
Trigger: TTGTCTGCTGGTGTCTCGGCAAAAGCCAGCCAGCCA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACAAAATGGGAGCCCCTaGACACAGCCTGGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEQNGSP*TQPGLL
Trigger: TAGCAGCCCAGGCTGTGTGCAGGGGCTCCCATTTTG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGATGCAGAGTTCCTTACTaGCTCATGTGTCGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGCRVPY*LMCRLH
Trigger: GTGCAGGCGACACATGAGGCAGTAAGGAACTCTGCA...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACCAGATTCCCACAACTTaGCTCCGGGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHQIPTT*LREWTP
Trigger: TGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTG...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTTCATCCAGCAGCACCTaGCAGATTCCCACAACTTGG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTSSSST*QIPTTW
Trigger: CCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGA...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AGGCTGTCACAGGCAGCTGCAGGGTCAACACTGAGTGGTCTGGCCGGCAGATGTGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: RLSQAAAGSTLSGLAGRCEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...ACATCTGCCGGCCAGACCACTCAGTGTTGACCCTGCAGCTGCCTGTGACAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCGGCATGAAGACCCTGTaGGTCAGGAGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCGMKTL*VRRKSL
Trigger: CAGCGACTTCCTCCTGACCCACAGGGTCTTCATGCC...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WPPTEALGSSLGCQTSLYGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...ATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp ACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGGTTCCTACAGGGCCACCCACTaGCTGACCAGCCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: TEALGSSLGCQTSLYTGSYRATH*LTSRKI
Trigger: GATCTTGCGGCTGGTCAGCCAGTGGGTGGCCCTGTA...GGAACCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAGGTCTGAGAGTTTCTaGAGGAAGCTGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSRSESF*RKLVAT
Trigger: TGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTTATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTYPQLG*HSCCQE
Trigger: TTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATA...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSYPQLG*HSCCQE
Trigger: TTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCAGCCTTGCCCAGCTGTaGCCAGCCTGTGAGTATCTT +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALSLAQL*PACEYL
Trigger: AAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGGRHLV*RPLYCT
Trigger: TGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCAATCTGGAAGACATCTaGTGTGGAGACCTCTCTATT +
Preference number: 4 (lower is better)
Translates to: PGGTSGWHQDLGPSLARANLEDI*CGDLSI
Trigger: AATAGAGAGGTCTCCACACCAGATGTCTTCCAGATT...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGAATAAACTGCAGGCCTaGCTGGACAACAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWNKLQA*LDNKAR
Trigger: TCTGGCTTTGTTGTCCAGCCAGGCCTGCAGTTTATT...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACGTCCTGGCAGTAGCTaGTTCCTAGGGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPERPGSS*FLGEVL
Trigger: CAGCACTTCCCCTAGGAACCAGCTACTGCCAGGACG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGCAAGGGAACTGGTTTaGTTACCACTGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTARELV*LPLPSA
Trigger: AGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTTTCTGTTGTGTCGCTaGGCTGGGCTCACCCTAGAG +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALFLLCR*AGLTLE
Trigger: CTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTGGGCACCATTCTCCTaGCAAGGTCTCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTWAPFS*QGLSQQ
Trigger: CTGTTGGGAGAGACCTTGCCAGGAGAATGGTGCCCA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTGTCTGTGGGGAGGCGTaGCCCTCCCTGGTGTGTACC +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSVCGEA*PSLVCT
Trigger: GGTACACACCAGGGAGGGCCACGCCTCCCCACAGAC...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
3UTR CAA 72 bp AGGGTGGTCACCAGCCCCTTGCCATGGGTCACCACGTaGACAGATCCCTTCCAGATAATGTACCACGAAGTG +
Preference number: 4 (lower is better)
Translates to: RVVTSPLPWVTT*TDPFQIMYHEV
Trigger: CACTTCGTGGTACATTATCTGGAAGGGATCTGTCAACGTGGTGACCCATGGCAAGGGGCTGGTGACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp ACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGGTTCCTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: TEALGSSLGCQTSLYTGSSSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...GGAACCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR TCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCCCTGCCCACCAGGTCTaGGAGTTTCTGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLPAHQV*EFLEEA
Trigger: AGCTTCCTCCAGAAACTCTCAGACCTGGTGGGCAGG...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAATTCCGGGCCTTCATCTaGGGAGATGCATTCCCACAG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEFRAFI*GDAFPQ
Trigger: CTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAA...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GTTGACAGATCCCTTCCAGATAATGTACCACGAAGTGCCCTTGTCCCCCTGGCTCAAAGAGACGCTCATTaGGCCCCAGAGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VDRSLPDNVPRSALVPLAQRDAH*APEMWP
Trigger: TGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTG...AGCCAGGGGGACAAGGGCACTTCGTGGTACATTATCTGGAAGGGATCTGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACGCACTTCCTGTGGGTTaGCAACAAAGAGACGCTCAT +
Preference number: 4 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHALPVG*QQRDAH
Trigger: ATGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGC...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGTGTGGTTTCCCTCATaGATGAAGGTCATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGVWFPS*MKVMSL
Trigger: CAAAGACATGACCTTCATTCATGAGGGAAACCACAC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCACTGATGATAAACCCTaGTTTCCTGGAAGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LYCTQRPSALHSPPTPGATDDKP*FPGSLL
Trigger: CAACAGACTTCCAGGAAATCAGGGTTTATCATCAGT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACATTCACTTAGTGACCTaGGGTCTAAGCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHIHLVT*GLSPAV
Trigger: CACAGCTGGGCTTAGACCTCAGGTCACTAAGTGAAT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTTGAGCCTCCTGTCCTaGTTGCTCAGTTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSLSLLS*LLSSRC
Trigger: GCATCTGGAACTGAGCAATCAGGACAGGAGGCTCAA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTAGACAATGGGTTGGATaGAAAGAAAGCCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASRQWVG*KESPRT
Trigger: AGTCCGGGGGCTTTCTTTTCATCCAACCCATTGTCT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ATGATGGTGGCTGCCCGGGGTGCATCATTCACCAGAGCCAGCTGTCCAAAATCAGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: MMVAARGASFTRASCPKSATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...TGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLTRSLP*CVVQRA
Trigger: TGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGT...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGAACAACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASEQHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTTGTTC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCTCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCSTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAATCCACATGGAAGTGGTaGAGAAGGGCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPESTWKW*RRAAQS
Trigger: ACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGA...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCTGTTGCAGACGTAGGTaGTGCGCTCCTGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSCCRRR*CAPARC
Trigger: GCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACA...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCTCTGCTGCCTCTTGTTaGAGACGTAGGTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCSAASC*RRRCCA
Trigger: AGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGA...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGCCAATGGCATCACCTaGAGAATTGACCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTANGIT*RIDLHQ
Trigger: CTGGTGAAGGTCAATTCTGCAGGTGATGCCATTGGC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTGAATTGAGATTCTTCTaGTCCTTGAGGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSELRFF*SLRWAA
Trigger: GGCGGCCCACCTCAAGGAGCAGAAGAATCTCAATTC...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTGGAAAAGCGGGGATTaGAGTTGGGAAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSWKSGD*SWEEAV
Trigger: GACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCA...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAACTGTTCACTGACTTaGTCAGATTCACTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: TESLAQLWPACEYLGPAHNCSLT*SDSLSD
Trigger: GTCACTAAGTGAATCTGAGCAAGTCAGTGAACAGTT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTGCAGCCATTCCTCTCTaGTTGACCTCCTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASAAIPL*LTSFQV
Trigger: TACCTGAAAGGAGGTCAAGCAGAGAGGAATGGCTGC...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCTGCCCACCTCCTGCCTaGTCTGGGGTCCTACTCTTA +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLCPPPA*SGVLLL
Trigger: TAAGAGTAGGACCCCAGAGCAGGCAGGAGGTGGGCA...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGAAGCCTGGACACGGTCCCTaGCTTGCTGTGTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: CLCWVMSTGIWSHGLQQKPGHGP*LAVWFK
Trigger: TTTGAACCACACAGCAAGGCAGGGACCGTGTCCAGG...CTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS-3UTR CCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCCCAGCAGCTCTCACCTaGCCAGCCCACCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLPAALT*PAHLHV
Trigger: AACATGAAGGTGGGCTGGCCAGGTGAGAGCTGCTGG...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACAGATTCCCACAACTTaGCTCCGGGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEQIPTT*LREWTP
Trigger: TGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATCAGTCGTGTTTCACATaGCAGAGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNQSCFT*QRAPSS
Trigger: GGATGAAGGTGCCCTCTGCCATGTGAAACACGACTG...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCAGTCGTGTTTCACATaGCAGAGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTQSCFT*QRAPSS
Trigger: GGATGAAGGTGCCCTCTGCCATGTGAAACACGACTG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CCA 90 bp TCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SGPMASNRSSRIFSGVPDWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...GTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHWNLVP*PPTEAL
Trigger: TAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAATCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCTTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: WNLVPWPPTEALGSSLGCLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...GCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSGRGSS*LGSQTG
Trigger: GCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCC...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCACTTTATCCCCAACTTaGATGGCACAGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCTLSPT*MAQLLP
Trigger: TGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGACTTTATCCCCAACTTaGATGGCACAGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQTLSPT*MAQLLP
Trigger: TGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGT...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACACTTTATCCCCAACTTaGATGGCACAGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHTLSPT*MAQLLP
Trigger: TGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACTTTATCCCCAACTTaGATGGCACAGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTLSPT*MAQLLP
Trigger: TGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACATCAGCTCCACCTGGTaGATACTGTTGAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHISSTW*ILLKRL
Trigger: GAGCCTCTTCAACAGTATCCACCAGGTGGAGCTGAT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCAGAGACACAGCTCGGTaGCCACCCAGTACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPTEALGSSLGCQTSLYTRDTAR*PPSTAA
Trigger: AGCTGCAGTACTGGGTGGCCACCGAGCTGTGTCTCT...GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp ACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTTTCTGCTCCTTGAGGTaGGCCGCCAGCTTAATGAAC +
Preference number: 4 (lower is better)
Translates to: TTKRRSLSPRDVATPRASFCSLR*AASLMN
Trigger: GTTCATTAAGCTGGCGGCCCACCTCAAGGAGCAGAA...AGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTGRHLV*RPLYCT
Trigger: TGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGTTGGAAGAAAGCTGTaGAAAGAAAGCAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHVGRKL*KESRGP
Trigger: GGGCCCCCTGCTTTCTTTCCACAGCTTTCTTCCAAC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGCCCACTGCCTGCTGTTaGAAGAAAGCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQPTACC*KKAVER
Trigger: TCTTTCCACAGCTTTCTTCCAACAGCAGGCAGTGGG...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGCAAGGGAACTGGTTTaGTTACCACTGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQARELV*LPLPSA
Trigger: AGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACAGCAGACAATGGGTTaGATGAAAAGAAAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSQQTMG*MKRKPP
Trigger: CGGGGGCTTTCTTTTCATCCAACCCATTGTCTGCTG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACACAAACTCCCAGCATaGGGCCACCGTAACATGGAG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEHKLPA*GHRNME
Trigger: CTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCCCAAGGGTGTGTCTGTaGGAGGAGAGCTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: QSIALPYISKSQGPLQSSPRVCL*EESFPR
Trigger: GCGTGGGAAGCTCTCCTCCCACAGACACACCCTTGG...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCGAGCTCCCACAGCACTaGCCACCAGGAGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GESPGSLADLFKTQIRLCELPQH*PPGAPW
Trigger: CCACGGGGCTCCTGGTGGCCAGTGCTGTGGGAGCTC...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAGATTCTTCTTTGAAGTaGGTCTTCTGTGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTDSSLK*VFCAPS
Trigger: GGAGGGGGCACAGAAGACCCACTTCAAAGAAGAATC...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp AGAAGCTGTCAGTTGCATCTGGACTGTAAAGTCCTATaGGACCACCACGGGGAGCTGATGGTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSCQLHLDCKVL*DHHGELMVTLA
Trigger: AGCCAGGGTGACCATCAGCTCCCCGTGGTGGTCCAATAGGACTTTACAGTCCAGATGCAACTGACAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGAAGTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: CLCWVMSTGIWSHGLQQKFSTPC*VVSPPA
Trigger: TGCCGGAGGGGACACTACTCAACATGGTGTTGAGAA...CTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp TCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCGGGCAGCTCCTCAAAGATaGGGTCCAGCTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: SNRSSRIFSGVPDITVYRAAPQR*GPALHP
Trigger: CGGATGAAGAGCTGGACCTCATCTTTGAGGAGCTGC...CCGGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGTGTGGTTTCCCTCATaGATGAAGGTCATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPVWFPS*MKVMSL
Trigger: CAAAGACATGACCTTCATTCATGAGGGAAACCACAC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGTGTGGTTTCCCTCATaGATGAAGGTCATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTVWFPS*MKVMSL
Trigger: CAAAGACATGACCTTCATTCATGAGGGAAACCACAC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR TCA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTTTACAGGTGGAGAAATaGAGGAAGAGAACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESLQVEK*RKRTVH
Trigger: GTGAACAGTTCTCTTCCTTCATTTCTCCACCTGTAA...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAATTGAGCCTCCTGTCCTaGTTGCTCAGTTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPELSLLS*LLSSRC
Trigger: GCATCTGGAACTGAGCAATCAGGACAGGAGGCTCAA...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCTTCCGACTCTGGTACTaGCTCTGTCCCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSFRLWY*LCPSSQ
Trigger: CTGGGAGGAGGGACAGAGTCAGTACCAGAGTCGGAA...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCGCCCACATCAGTTTCTaGGCGTCAGCCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSAHISF*ASAKSQ
Trigger: CTGGCTCTTGGCTGACGCTCAGAAACTGATGTGGGC...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCCAGGCCAGGGTTGAATaGGGTGCAGCATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSQARVE*GAASAP
Trigger: AGGTGCTGATGCTGCACCTCATTCAACCCTGGCCTG...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATAACTACCAGCAGTGCTaGACTCTCTTCCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNNYQQC*TLFQTL
Trigger: CAGGGTTTGGAAGAGAGTTCAGCACTGCTGGTAGTT...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGAAGGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: CLCWVMSTGIWSHGLQQKATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...CTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACAGGATGATGGTGGCTaGCCGGGGTGCATCATTCAC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPQDDGG*PGCIIH
Trigger: GTGAATGATGCACCCCGGGCAGCCACCATCATCCTG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGGAATCTGGTCCCATGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: WNLVPWPPTEALGSSLGCGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...GCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp ACAACAAAGAGACGCTCATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: TTKRRSLSPRDVATPRASGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...AGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAATGAGCGTCTCTTTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGGATCTTCTCTGGGGTaGCAGACATCACTGTATACC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALGSSLG*QTSLYT
Trigger: GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTCCACGGGCATCTGGCTaGAGGCCAATGGCATCACCT +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSPRASG*RPMASP
Trigger: AGGTGATGCCATTGGCCTGCAGCCAGATGCCCGTGG...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp AGTTCCGGGCCTTCATCTGAGGAGATGCATTCCCACAGCCATTCTCCAACCTGTTGGAGACCTCTCTATTaGACACAACGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: SSGPSSEEMHSHSHSPTCWRPLY*TQRPSA
Trigger: TGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA...ACAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR GCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACA +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLTVKIN*RPGWTT
Trigger: TGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGAAGAAGCTGTCAGTTaGATCTGGACTGTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPEEAVS*IWTVKS
Trigger: GGACTTTACAGTCCAGATGCAACTGACAGCTTCTTC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTTTGCTCAGTTCCAGATaGTTCCGTGCTTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSLLSSR*FRASPV
Trigger: CACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAA...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACCGGATCTCAGGCTCTaGCTTCCTTTTGTTCGGATG +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEPDLRL*LPFVRM
Trigger: CATCCGAACAAAAGGAAGGCAGAGCCTGAGATCCGG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCAATCTCAGGGACCCCTaGAGAGTTCCTTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCNLRDP*RVPYCL
Trigger: GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTCCTGCCTGCTCTGGGGTCCTACTCTTACTCTCGCTCCTCCAGGGATCCTCCTTCCACATGGCGAGAGTaGTTTGAAGAAAATCACAGA +
Preference number: 4 (lower is better)
Translates to: LLPALGSYSYSRSSRDPPSTWRE*FEENHR
Trigger: TCTGTGATTTTCTTCAAAGCACTCTCGCCATGTGGA...AGGAGGATCCCTGGAGGAGCGAGAGTAAGAGTAGGACCCCAGAGCAGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCAAACTCCAGTTCCACCTaGCCACGAGGCCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPNSSST*PRGLTP
Trigger: AGGAGTGAGGCCTCGTGGGCAGGTGGAACTGGAGTT...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCCAGATTCCCACAACTTaGCTCCGGGAATGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLQIPTT*LREWTP
Trigger: TGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTG...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACAGTCGTGTTTCACATaGCAGAGGGCACCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEQSCFT*QRAPSS
Trigger: GGATGAAGGTGCCCTCTGCCATGTGAAACACGACTG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ACTGACTCTGTCCCTCCTCCCAGCTCTGCGTATAGCAGATCCTCCAGGTTCGGAGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: TDSVPPPSSAYSRSSRFGEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...TCCGAACCTGGAGGATCTGCTATACGCAGAGCTGGGAGGAGGGACAGAGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGAGGAATGTCTCTGTTaGGTCATGAGCACTGGAATC +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSEECLC*VMSTGI
Trigger: GATTCCAGTGCTCATGACCCAACAGAGACATTCCTC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTGGCTCCACATGGAAGTaGTGCAGAAGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSGSTWK*CRRAAQ
Trigger: CTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCC...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCTCATGCACTTCCTGTaGGTTGACAACAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCLMHFL*VDNKET
Trigger: CGTCTCTTTGTTGTCAACCCACAGGAAGTGCATGAG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp ATGATGGTGGCTGCCCGGGGTGCATCATTCACCAGAGCCAGCTGTCCAAAATCATGGATCAGCTCCACCTaGTGGATACTGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MMVAARGASFTRASCPKSWISST*WILLKR
Trigger: CCTCTTCAACAGTATCCACCAGGTGGAGCTGATCCA...TGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSGRHLV*RPLYCT
Trigger: TGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CCA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCGCTGTCAGTTGCATCTaGACTGTAAAGTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTAVSCI*TVKSYW
Trigger: CCAATAGGACTTTACAGTCCAGATGCAACTGACAGC...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAACCACGGCAAGGGAACTaGTTTGGTTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEPRQGN*FGYHCH
Trigger: ATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTGG...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCAAATCTTGTGACTATTaGGAAGGAGAGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLKSCDY*EGEQPE
Trigger: CTCTGGCTGCTCTCCTTCCCAATAGTCACAAGATTT...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCGGTTCCCTTTCCTCCTaGGTTTGCCCACCAGGAATC +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLGSLSS*VCPPGI
Trigger: GATTCCTGGTGGGCAAACCCAGGAGGAAAGGGAACC...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLFSTPC*VVSPPA
Trigger: TGCCGGAGGGGACACTACTCAACATGGTGTTGAGAA...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTTCTTCATCCGTGCGCTaGCCTGGGGGCTTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSSSSVR*PGGFRS
Trigger: ACTTCGAAAGCCCCCAGGTCAGCGCACGGATGAAGA...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR TCA 90 bp CCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATACCTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPTEALGSSLGCQTSLYTSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...GGTATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR TCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTGCTCACCCTAGAGTCTaGAGAACGGTGAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSAHPRV*RTVKGH
Trigger: GTGGCCCTTCACCGTTCTTCAGACTCTAGGGTGAGC...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTGGTGGCTGCCCGGGGTaGATCATTCACCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLGGCPG*IIHQSQ
Trigger: CTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACC...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCCAGCCGCATGGTCTTTaGCTCCACATCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCQPHGL*LHILDD
Trigger: ATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTG...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCGCACCAGCACCACTTTaGCATGTTCTTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QSIALPYISKSQGPLQSSAPAPL*HVLPAA
Trigger: TGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTGTGGGATCAGCTCATaGACTTCCTGTGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSCGISS*TSCGLT
Trigger: TGTCAACCCACAGGAAGTGCATGAGCTGATCCCACA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAATTGCTCAGTTCCAGATaGTTCCGTGCTTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPELLSSR*FRASPV
Trigger: CACAGGAGAAGCACGGAAGCATCTGGAACTGAGCAA...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCCGGACCTCAATCCATTaGTCTTCCCTACATTTCCAA +
Preference number: 4 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGRTSIH*SSLHFQ
Trigger: TTGGAAATGTAGGGAAGAGCAATGGATTGAGGTCCG...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCAGTTGTTGAACTGCTCTaGCCCTTGCCTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPVVELL*PLPDCS
Trigger: GCTGCAGTCAGGCAAGGGGCAGAGCAGTTCAACAAC...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCAGTGTCCCGTGTCACTaGACATCACGGGTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCSVPCH*TSRVVE
Trigger: TTCAACAACCCGTGATGTGCAGTGACACGGGACACT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAACACAAATCAGACTTTaGCAACCTTGGCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: ARRREVNSPVGWERYQRTTQIRL*QPWLKP
Trigger: GGGTTTGAGCCAAGGTTGGCAAAGTCTGATTTGTGT...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGACTCGCTGTTGGTGAGTaGTGTCCAGCGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRLAVGE*CPAQPL
Trigger: CAGGGGCTGCGCTGGACACCACTCACCAACAGCGAG...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp AGTTCCGGGCCTTCATCTGAGGAGATGCATTCCCACAGCCATTCTCCAACCTGTTCCCTTCCTTGGCCTTaGGTCATTCGTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGPSSEEMHSHSHSPTCSLPWP*VIRYSW
Trigger: CCAGGAATAACGAATGACCCAAGGCCAAGGAAGGGA...ACAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAATCTGGAAGACATCTaGTGTGGAGACCTCTCTATT +
Preference number: 4 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSNLEDI*CGDLSI
Trigger: AATAGAGAGGTCTCCACACCAGATGTCTTCCAGATT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCTGTGTCGCCTGCACATaGGTGATTCCCAAAACTACC +
Preference number: 4 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTCVACT*VIPKTT
Trigger: GGTAGTTTTGGGAATCACCCATGTGCAGGCGACACA...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAACTTCCGGTCTCGGATaGGGTTTGGGCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRTSGLG*GLGRWP
Trigger: TGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGT...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCATCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPSTRRK*QLSSRR
Trigger: CCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGA...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGGGGGCTTTCGAAGTaGCACAGTGAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLWGLSK*HSEQGV
Trigger: GACGCCCTGCTCACTGTGGCACTTCGAAAGCCCCCA...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGACCAGCTCTTCATCCGTaGGCTGACCTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRPALHP*ADLGAF
Trigger: GAAAGCCCCCAGGTCAGCGCACGGATGAAGAGCTGG...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEEIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTACCAGCCGCAAGATCTaGTGCCTCTTGTTGCAGACG +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSTSRKI*CLLLQT
Trigger: CGTCTGCAACAAGAGGCAGCAGATCTTGCGGCTGGT...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACACTGTGAAAATAAACTaGAGGCCTGGCTGGACAACA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHTVKIN*RPGWTT
Trigger: TGTTGTCCAGCCAGGCCTGCAGTTTATTTTCACAGT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGAAGAAGCTGTCAGTTaGATCTGGACTGTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALEEAVS*IWTVKS
Trigger: GGACTTTACAGTCCAGATGCAACTGACAGCTTCTTC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCGGATTTTATTCCCAGTaGAGCCCTCCCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSGFYSQ*SPPHHQ
Trigger: TTGGTGGTGGGGAGGGCTGCACTGGGAATAAAATCC...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCAGGCTAAGGGATAAGTaGAAAGGCCCTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSRLRDK*KGPEGR
Trigger: TCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCT...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCGAACGAGAAGGATCCTaGCAGGCAGAGCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSEREGS*QAEPEK
Trigger: TTTCTCTGGCTCTGCCTGGCAGGATCCTTCTCGTTC...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTATGTTTCTTTTCCAGTaGGTAAGTCCAGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTMFLFQ*VSPGTV
Trigger: CACTGTACCTGGACTTACCCACTGGAAAAGAAACAT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389212.7
CDS-3UTR CCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCATCATCCAGCAGCACCTaGCAGATTCCCACAACTTGG +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPSSSST*QIPTTW
Trigger: CCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGA...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGATGAGCACTGGAATCTaGTCCCATGGCCTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKMSTGI*SHGLQQ
Trigger: CTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCAT...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCATTGGGTCATGAGCACTaGAATCTGGTCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPLGHEH*NLVPWP
Trigger: AGGCCATGGGACCAGATTCCAGTGCTCATGACCCAA...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTCCCGCAGGCTCCACATaGAAGTGGTGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLPAGST*KWCRRA
Trigger: TGCCCTTCTGCACCACTTCCATGTGGAGCCTGCGGG...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GGAATGTCTCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATGGCCTCCAACAGGAAGACATCTGGTGTaGAGACCTCTCTATTGCACA +
Preference number: 4 (lower is better)
Translates to: GMSLLGHEHWNLVPWPPTGRHLV*RPLYCT
Trigger: TGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC...TGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGAGACATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CCA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGCTGTCAGTTGCATCTaGACTGTAAAGTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALAVSCI*TVKSYW
Trigger: CCAATAGGACTTTACAGTCCAGATGCAACTGACAGC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCTACCTGGCTTACAGGTaGAGAAATGAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSYLAYR*RNEGRE
Trigger: TTCTCTTCCTTCATTTCTCCACCTGTAAGCCAGGTA...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTACCTGGCTTACAGGTaGAGAAATGAAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCYLAYR*RNEGRE
Trigger: TTCTCTTCCTTCATTTCTCCACCTGTAAGCCAGGTA...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACAGGGATGCAGTTCATaGAAACCACTGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPQGCSS*KPLSGL
Trigger: GAGGCCTGACAGTGGTTTCCATGAACTGCATCCCTG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTCCGATACTGTGTCAGTaGCCCTGTCCCAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLPILCQ*PCPSPQ
Trigger: CTGTGGGCTGGGACAGGGCCACTGACACAGTATCGG...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACACACAGCTGCTAACTaGCAGAGTTGGAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPHTAAN*QSWNPS
Trigger: GGAGGGATTCCAACTCTGCCAGTTAGCAGCTGTGTG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAGGACACACAGTAGGGTaGGACCATGGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRGHTVG*DHGEPA
Trigger: AGCAGGCTCCCCATGGTCCCACCCTACTGTGTGTCC...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp CGTATAGCAGATCCTCCAGGTTCGGACCTCAATCCATaGCTCTTCCCTACATTTCCAAATCTCAGGGACCCC +
Preference number: 4 (lower is better)
Translates to: RIADPPGSDLNP*LFPTFPNLRDP
Trigger: GGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTGAGGTCCGAACCTGGAGGATCTGCTATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp AGGGGCAGGGAAGAGAGGACTTCGTATGACCAGAGCTaGCTGGGACCATTCTCAACACTGATGATAAACCCT +
Preference number: 4 (lower is better)
Translates to: RGREERTSYDQS*LGPFSTLMINP
Trigger: AGGGTTTATCATCAGTGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGAAGTCCTCTCTTCCCTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp AGTTCCGGGCCTTCATCTGAGGAGATGCATTCCCACAGCCATTCTCCAACCTGTGTGTGGTTTCCCTCATaGATGAAGGTCATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSGPSSEEMHSHSHSPTCVWFPS*MKVMSL
Trigger: CAAAGACATGACCTTCATTCATGAGGGAAACCACAC...ACAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGCCCGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR TCA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTACTGATGATAAACCCTaGTTTCCTGGAAGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSTDDKP*FPGSLL
Trigger: CAACAGACTTCCAGGAAATCAGGGTTTATCATCAGT...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACAAGAGAACTGTTCACTaGCTTGCTCAGATTCACTTA +
Preference number: 4 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHKRTVH*LAQIHL
Trigger: TAAGTGAATCTGAGCAAGTCAGTGAACAGTTCTCTT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp TGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATATACGGTTGAAGTCCTaGTTGTCCACACGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: WPPTEALGSSLGCQTSLYIRLKS*LSTRRK
Trigger: TTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTAT...ATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR GCA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAACTGTTCACTGACTTaGTCAGATTCACTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSNCSLT*SDSLSD
Trigger: GTCACTAAGTGAATCTGAGCAAGTCAGTGAACAGTT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR GCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGACCAATGGCCCAACTATaGTCCTCCTCCTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRPMAQL*SSSSLP
Trigger: TGGGAGGGAGGAGGAGGAGCATAGTTGGGCCATTGG...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCTGGGCATCTCGGTCCTaGAAGGCCCAGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GESPGSLADLFKTQIRLCWASRS*KAQSCF
Trigger: GAAACACGACTGGGCCTTCCAGGACCGAGATGCCCA...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTAGCGGGGATTGCAGTTaGGAAGAAGCTGTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLLSSYVTLGKPACASVSSGDCS*EEAVSC
Trigger: GCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCT...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CCA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCAGCTAACTGGCAGAGTTaGAATCCCTCCTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPANWQS*NPSCSF
Trigger: AAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGC...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp TCTCCCCAGCTCCAGGCTCCTCCACACTTCCGTAGCTaGTCATCTTGCTTTGAAGATTCTTCTTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPQLQAPPHFRS*SSCFEDSSLKW
Trigger: CCACTTCAAAGAAGAATCTTCAAAGCAAGATGACAAGCTACGGAAGTGTGGAGGAGCCTGGAGCTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp AGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTaGGGAAGAAGCTGTCAGTTGCATCTGGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: RTSSSVEKRGLQ*GRSCQLHLDCK
Trigger: TTTACAGTCCAGATGCAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp ACCTTGGCTCAAACCCCTTTAATGGTTTGCACTGCTCTTAGGACAAAGATCAGAGTCTCTGTTGGGTCATaGGCACTGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TLAQTPLMVCTALRTKIRVSVGS*ALESGP
Trigger: GGGACCAGATTCCAGTGCTCATGACCCAACAGAGAC...TCTGATCTTTGTCCTAAGAGCAGTGCAAACCATTAAAGGGGTTTGAGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAAGAGAACTGTTCACTaGCTTGCTCAGATTCACTTA +
Preference number: 4 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHKRTVH*LAQIHL
Trigger: TAAGTGAATCTGAGCAAGTCAGTGAACAGTTCTCTT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAATTACAGGTGGAGAAATaGAGGAAGAGAACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RGSFSIVSITSHPQKTPELQVEK*RKRTVH
Trigger: GTGAACAGTTCTCTTCCTTCATTTCTCCACCTGTAA...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR TCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCGAGCCTGCTGGATGGTaGGGCCCCTGGATTTTATTC +
Preference number: 4 (lower is better)
Translates to: GESPGSLADLFKTQIRLCEPAGW*GPWILF
Trigger: GAATAAAATCCAGGGGCCTCACCATCCAGCAGGCTC...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp CTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTTACTGCCTCCTGCATCCTTCCACATaGATGATCCATTACCTCACA +
Preference number: 4 (lower is better)
Translates to: LFPTFPNLRDPCRVPYCLLHPST*MIHYLT
Trigger: TGTGAGGTAATGGATCATTCATGTGGAAGGATGCAG...GAGGCAGTAAGGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTAGTTGGAATCCCTCCTaGTCCTTTCCCCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLSWNPS*SFPPLC
Trigger: GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACT...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCCAACCAAATCCTGGCTaGAGTCACATCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSQPNPG*SHIFSS
Trigger: GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTG...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
3UTR CAA 72 bp CACCTGTCTACCCTGCTATTAAGCAGTTATGTGACCTaGGGCAAACCTGCCTGTGCCTCAGTTTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: HLSTLLLSSYVT*GKPACASVSLT
Trigger: AGTCAAAGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAGGGTAGACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR GCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCGCCACAGCCTTGATGTaGAGCAGCTCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: GESPGSLADLFKTQIRLCATALM*SSSSKM
Trigger: CATCTTTGAGGAGCTGCTGCACATCAAGGCTGTGGC...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR GCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTAGCCCACAGCAGGGATaGAGTTCATGGAAACCACTG +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLSPQQG*SSWKPL
Trigger: CAGTGGTTTCCATGAACTGCATCCCTGCTGTGGGCT...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CCA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTCTCTCTTCCAAACCCTaGTCTCAAAAACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGESPGSLADLFKTQIRLLSSKP*SQKPPA
Trigger: TGCAGGGGGTTTTTGAGACCAGGGTTTGGAAGAGAG...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR TCA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCATGGCGAGAGTGCTTTaGAGAAAATCACAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GESPGSLADLFKTQIRLCMARVL*RKSQRT
Trigger: TGTCCTCTGTGATTTTCTTCAAAGCACTCTCGCCAT...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS TCA 90 bp CCTCGCCTCTTCTACTGGTCTAGCCCGCAAGCCCCTCGGAGTTCCTaGGGGGCAGACAGGCCCTGGTGCACACAGGCGCTCCATGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRLFYWSSPQAPRSS*GADRPWCTQALHAR
Trigger: CCTGGCATGGAGCGCCTGTGTGCACCAGGGCCTGTCTGCCCCTCAGGAACTCCGAGGGGCTTGCGGGCTAGACCAGTAGAAGAGGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476259.1
CDS GCA 90 bp TCTCGGATGAGGTTTGGGCAGGTGGCCAGCAGATGCCGATGCAGCTaGCTCCCAGCCCTGAGCACCCGCTCTGTGGAGGCCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SRMRFGQVASRCRCS*LPALSTRSVEACSR
Trigger: CCTGGAGCAGGCCTCCACAGAGCGGGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTGCCCAAACCTCATCCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS GCA 90 bp CGGAGGGTGCCAGTGGGTAAGTCCAGGTACAGTGAACTGGGCCAGTaGCTAGCTGGACTGGCTGCCAGGGCAGCAGGATGCAGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: RRVPVGKSRYSELGQ*LAGLAARAAGCRAR
Trigger: CCGAGCCCTGCATCCTGCTGCCCTGGCAGCCAGTCCAGCTAGGCACTGGCCCAGTTCACTGTACCTGGACTTACCCACTGGCACCCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449771.7
ENST00000479866.5
ENST00000482843.5
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACAGGGGCTCGTCCTGGTaGGGGAGCCAAACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHRGSSW*GSQTGK
Trigger: CTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPATSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS TCA 90 bp GGTAGGAGCAGCTTCGGGGCCGGTGCATCCTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCACCACGTCAGGGAGGGCTCCCACCC +
Preference number: 5 (lower is better)
Translates to: GRSSFGAGASFSTPC*VVSPPAPRQGGLPP
Trigger: GGGTGGGAGCCCTCCCTGACGTGGTGCCGGAGGGGACACTACTCAACATGGTGTTGAGAAGGATGCACCGGCCCCGAAGCTGCTCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000547856.5
ENST00000548919.5
ENST00000549151.5
ENST00000549347.1
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCC +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCADSHN*APGMDP
Trigger: GGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGC...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSGEPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCC...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: PGGTSGWHQDLGPSLARASRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGTGGGTCTGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WCRRAAQSWALGMKTLWVCSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...GACCCACAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPACSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLTSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TGGESLARASRYTRWFHEWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...CTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CAA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LYCTQRPSALHSPPTPGAWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SWSVSWPARSLALTRSSPQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTG...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCAACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPATGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGAGAGAGGCACAGGGTaGTGGCTTCGGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPERGTG*WLRQWC
Trigger: GCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCTGGAGGCACATCTGGGTGGCATCAGGATCTTGGACCCAGTCTGGCCCGTGCCGCCAAGGCCCTGCCCTaGCCACACACGGTACACACA +
Preference number: 5 (lower is better)
Translates to: PGGTSGWHQDLGPSLARAAKALP*PHTVHT
Trigger: TGTGTGTACCGTGTGTGGCAAGGGCAGGGCCTTGGC...GGCACGGGCCAGACTGGGTCCAAGATCCTGATGCCACCCAGATGTGCCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGCCAAGGCCCTGCCCTaGCCACACACGGTACACACA +
Preference number: 5 (lower is better)
Translates to: QPVSILARHTLAFPAASAAKALP*PHTVHT
Trigger: TGTGTGTACCGTGTGTGGCAAGGGCAGGGCCTTGGC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGGTGGCATCAGGATCTaGGACCCAGTCTGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHGGIRI*DPVWPV
Trigger: CACGGGCCAGACTGGGTCCAAGATCCTGATGCCACC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCTCCGGACCACGGGGCTaGCTCCCTCCTCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGSGPRG*LPPPQD
Trigger: GTCCTGTGGAGGAGGGAGCAAGCCCCGTGGTCCGGA...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549151.5
CDS-3UTR CAA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: DLLPLVADVGAALLLAATVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTGTGGGGAGGCGTGGCCCTCCCTGGTGTGTACCCCACAGTCAGGGCCTGAGCGACTTTATCCCCAACTaGGATGGCACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SVGRRGPPWCVPHSQGLSDFIPN*DGTAAA
Trigger: GGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGTC...GCTCAGGCCCTGACTGTGGGGTACACACCAGGGAGGGCCACGCCTCCCCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACCCCACGCTTGGGCAGTCAGGGAGACAGAAGGCAGCACAAACTCCCAGCATGGTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TPRLGSQGDRRQHKLPAWWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...CCATGCTGGGAGTTTGTGCTGCCTTCTGTCTCCCTGACTGCCCAAGCGTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCGTGGTCCGTCAGCTGGCCTGCCAGGTCCTTGGCACTCACCAGGTCCAGCCCCACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: SWSVSWPARSLALTRSSPTWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...GGGGCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCAGCTGACGGACCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp CGGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACACGGGGCTTCCAATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: RWFHEGSQALSQANTGLPMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...TGGAAGCCCCGTGTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CAA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: ASRYTRWFHEGSQALSQATGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...CGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATGAAGACCCTGCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WKWCRRAAQSWALGMKTLQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...CAGGGTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGCTGGCTGGCTGGCTTTaGCCGAGACACCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPLAGWL*PRHQQT
Trigger: TGTCTGCTGGTGTCTCGGCAAAAGCCAGCCAGCCAG...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCATCAGACCCCTGTCCTaGGCCCAGGGGGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGIRPLS*AQGALP
Trigger: GGGCAGGGCCCCCTGGGCCAAGGACAGGGGTCTGAT...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS TCA 90 bp CGTGCGGTTCCCACTGCCTGGAGTACTGTCCATCCTGGCCAGCTCTaGAGCCATCCATGGAAATGCACTCCGGACCACGGGGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RAVPTAWSTVHPGQL*SHPWKCTPDHGACS
Trigger: GGAGCAAGCCCCGTGGTCCGGAGTGCATTTCCATGGATGGCTTCAGAGCTGGCCAGGATGGACAGTACTCCAGGCAGTGGGAACCGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCCTTCTCAACACCATGTaGAGTAGTGTCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCLLNTM*SSVPSG
Trigger: GCCGGAGGGGACACTACTCAACATGGTGTTGAGAAG...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCC +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGADSHN*APGMDP
Trigger: GGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPGEPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: ARQVPPAARTQGNSKARGSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPAYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGTACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACGACTTTATCCCCAACTaGGATGGCACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHDFIPN*DGTAAA
Trigger: GGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGTC...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHTSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGGATGACAGGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GMTGGESLARASRYTRWFQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTG...GAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGTCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: RAWRGPVGIPGGSMRDPRRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...CCTGGGATCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CAAGGTCTCTCCCAACAGGCTCAAAAGCCATCCTGCCCGAGACTGGGGCAGCTGGGTGGCATCAGGATCTaGGACCCAGTCTGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: QGLSQQAQKPSCPRLGQLGGIRI*DPVWPV
Trigger: CACGGGCCAGACTGGGTCCAAGATCCTGATGCCACC...CAGCTGCCCCAGTCTCGGGCAGGATGGCTTTTGAGCCTGTTGGGAGAGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACAGCACAGGACTGCCCTaGGCTGTCACCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHSTGLP*AVTSAT
Trigger: TGTAGCAGAGGTGACAGCCAAGGGCAGTCCTGTGCT...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGGGCACTTGGTTTCTGTaGTGTCGCTGGGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGGTWFL*CRWAGL
Trigger: GAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCC...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTAGCCTTTCCCCGCTTTaGGGCCTCCTGTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESSLSPL*GLLSSG
Trigger: CCCAGAGGACAGGAGGCCCAAAAGCGGGGAAAGGCT...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAGCCTTTCCCCGCTTTaGGGCCTCCTGTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPASLSPL*GLLSSG
Trigger: CCCAGAGGACAGGAGGCCCAAAAGCGGGGAAAGGCT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ACGCAGGAAATGACAGTTGTCTTCTCGCAGGATGATGGTGGCTGCCCGGGGTGCTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: TQEMTVVFSQDDGGCPGCSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...GCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTCCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGGCTCCACATGGAAGTGGTGCAGAAGGGCAGCGCAGAGTTGGGCGCTGGGCATAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RLHMEVVQKGSAELGAGHSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...ATGCCCAGCGCCCAACTCTGCGCTGCCCTTCTGCACCACTTCCATGTGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSCSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCATGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPCSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAAGGGGCTCGTCCTGGTaGGGGAGCCAAACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPRGSSW*GSQTGK
Trigger: CTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCT...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: QPVSILARHTLAFPAASAASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGGGGAGAGCTTGGCGAGGGCCAGTCGGTATACCCGGTGGTTCCATGAGGGAACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GGESLARASRYTRWFHEGTWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...TCCCTCATGGAACCACCGGGTATACCGACTGGCCCTCGCCAAGCTCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547856.5
ENST00000548434.1
CDS-3UTR CAA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCGAGAGAGGCACAGGGTaGTGGCTTCGGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSERGTG*WLRQWC
Trigger: GCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTC...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGAGAGAGGCACAGGGTaGTGGCTTCGGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLERGTG*WLRQWC
Trigger: GCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTACTCCACGGAGAGCCTaGCCCAGCTGTGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTTPRRA*PSCGQP
Trigger: AGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CACTCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGGCAAGGGAACTGGTTaGGTTACCACTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: HSTESLAQLWPACEYLGPGKGTG*VTTAIC
Trigger: GCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCC...CGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCATACCCATCGGATCCTaGCATCCTGCCTCCCAGACC +
Preference number: 5 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSIPIGS*HPASQT
Trigger: GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTAT...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCGACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: DLLPLVADVGAALLLAATDTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTC...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS GCA 90 bp GTTTCTTTTCCAGTGGGTAAGTCCAGGTACAGTGAACTGGGCCAGTaGCTAGCTGGACTGGCTGCCAGGGCAGCAGGATGCAGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: VSFPVGKSRYSELGQ*LAGLAARAAGCRAR
Trigger: CCGAGCCCTGCATCCTGCTGCCCTGGCAGCCAGTCCAGCTAGGCACTGGCCCAGTTCACTGTACCTGGACTTACCCACTGGAAAAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389212.7
CDS GCA 90 bp GAGCACGGGCGCCACACAGCATTCACACCACCAGAGGGCTCTGCTTaGCACATTCACCTGAGCTCAGGTAAGGCACCTGGGACCAAGGAT +
Preference number: 5 (lower is better)
Translates to: EHGRHTAFTPPEGSA*HIHLSSGKAPGTKD
Trigger: ATCCTTGGTCCCAGGTGCCTTACCTGAGCTCAGGTGAATGTGGCAAGCAGAGCCCTCTGGTGGTGTGAATGCTGTGTGGCGCCCGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395360.6
CDS GCA 90 bp CTAGTAGCGGGGTTGAAGTCCTGGGTGGTGCTCAGAATACACAGGTaGATGTGCCCACGCAGCCACGCAGCCCAGGGAAGCACATCCAAG +
Preference number: 5 (lower is better)
Translates to: LVAGLKSWVVLRIHR*MCPRSHAAQGSTSK
Trigger: CTTGGATGTGCTTCCCTGGGCTGCGTGGCTGCGTGGGCACATGCACCTGTGTATTCTGAGCACCACCCAGGACTTCAACCCCGCTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS-3UTR CAA 90 bp CTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCTTCTCAACACCATGTaGAGTAGTGTCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: LLHTTSQRTPLSTHSWGLLLNTM*SSVPSG
Trigger: GCCGGAGGGGACACTACTCAACATGGTGTTGAGAAG...GAGGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGCTTCTCAACACCATGTaGAGTAGTGTCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGLLNTM*SSVPSG
Trigger: GCCGGAGGGGACACTACTCAACATGGTGTTGAGAAG...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCC +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPADSHN*APGMDP
Trigger: GGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGC...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASCSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCAGGGGCTCGTCCTGGTaGGGGAGCCAAACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCRGSSW*GSQTGK
Trigger: CTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCT...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCGACTTTATCCCCAACTaGGATGGCACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LYCTQRPSALHSPPTPGADFIPN*DGTAAA
Trigger: GGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGTC...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCACCAGCACCTGCCCCTaGGTCCAGCCATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALTSTCP*VQPSSW
Trigger: CCAGGAGGATGGCTGGACCAAGGGGCAGGTGCTGGT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GATCTGCTGCCTCTTGTTGCAGACGTAGGTGCTGCGCTCCTGCTCGCTGCCACCGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: DLLPLVADVGAALLLAATASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...GGTGGCAGCGAGCAGGAGCGCAGCACCTACGTCTGCAACAAGAGGCAGCAGATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACTGCACTTCCTGTGGGTaGACAACAAAGAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHCTSCG*TTKRRS
Trigger: TGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGCA...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGGCCTGCCAGGTCCTaGGCACTCACCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAPLCHVLPAAWSLPPHPWPARS*ALTRSS
Trigger: GCTGGACCTGGTGAGTGCCAAGGACCTGGCAGGCCA...AGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LYCTQRPSALHSPPTPGATWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTG...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCGGCTGATGGCCGAGTaGCTGAGGCCAAACATGACG +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLRLMAE*LRPNMT
Trigger: CGTCATGTTTGGCCTCAGCAACTCGGCCATCAGCCG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASTGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: QHQHHFAMFFQPHGLCLHTGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...GTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSTGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCAGCCTGTGAGTATCTaGGCCCGGCACACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHQPVSI*ARHTLA
Trigger: AGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGGGGTTTCCTGGAAGTCTGTaGGGCCTCAACAAGCGACGG +
Preference number: 5 (lower is better)
Translates to: FLARVHSEVLLSCQSSQGFPGSL*GLNKRR
Trigger: CCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAAA...CCCCTGTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCGGCCCCCGTGGCACTaGGTTTCTGTTGTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSRPPWH*VSVVSL
Trigger: CAGCGACACAACAGAAACCAAGTGCCACGGGGGCCG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCACACCACCCCACGCTaGGGCAGTCAGGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSHTTPR*GSQGDR
Trigger: TCTGTCTCCCTGACTGCCCAAGCGTGGGGTGGTGTG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp GCCCGCAGGAGGGAAGTCAACTCTCCAGTGGGATGGGAGAGATACCAAAGGACAGAACTGCTCTGCCCCTaGCCTGACTGCAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: ARRREVNSPVGWERYQRTELLCP*PDCSPT
Trigger: TGTGGGGCTGCAGTCAGGCAAGGGGCAGAGCAGTTC...TGTCCTTTGGTATCTCTCCCATCCCACTGGAGAGTTGACTTCCCTCCTGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCCTTTCCTCCTGGGTTaGCCCACCAGGAATCCTCTT +
Preference number: 5 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSPFLLG*PTRNPL
Trigger: AAGAGGATTCCTGGTGGGCAAACCCAGGAGGAAAGG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS GCA 90 bp GGCCAGCCCACAGTTTCCCAAAGCGGCCGCTTTATTTCTTCCCTCTaGGCCATCACACGTGCGGTTCCCACTGCCTGGAGTACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GQPTVSQSGRFISSL*AITRAVPTAWSTVH
Trigger: ATGGACAGTACTCCAGGCAGTGGGAACCGCACGTGTGATGGCGCAGAGGGAAGAAATAAAGCGGCCGCTTTGGGAAACTGTGGGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTCTCGCTTCACCGAGTaGGAGAGGTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTSRFTE*ERWATA
Trigger: GGCTGTGGCCCACCTCTCCAACTCGGTGAAGCGAGA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCCTCCTGCTCCTTTCCCCCTCTGTGCTCCGATACTGTGTCAGTGGCCCTGTCCCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: PSCSFPPLCSDTVSVALSPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...GGACAGGGCCACTGACACAGTATCGGAGCACAGAGGGGGAAAGGAGCAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCTTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LWPACEYLGPAHPGFPGCFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...GCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACTTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: IWCGDLSIAHNVPAHSTLKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...GAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ATGATGGTGGCTGCCCGGGGTGCATCATTCACCAGAGCCAGCTGTCCAAAATCAAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: MMVAARGASFTRASCPKSKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...TGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACAGGGGCTCGTCCTGGTaGGGGAGCCAAACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHRGSSW*GSQTGK
Trigger: CTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCT...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCGACTTTATCCCCAACTaGGATGGCACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGDFIPN*DGTAAA
Trigger: GGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGTC...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ATTGAAGCGGCGCATGAAGCGCTCCAGGTTGGCGGTGGTGACATCCCGCAGATGGACTTTATCCCCAACTaGGATGGCACAGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: IEAAHEALQVGGGDIPQMDFIPN*DGTAAA
Trigger: GGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGTC...CATCTGCGGGATGTCACCACCGCCAACCTGGAGCGCTTCATGCGCCGCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATGCACTTCCTGTGGGTaGACAACAAAGAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPACTSCG*TTKRRS
Trigger: TGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGCA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPATWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp ATGATGGTGGCTGCCCGGGGTGCATCATTCACCAGAGCCAGCTGTCCAAAATCAATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: MMVAARGASFTRASCPKSMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...TGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCAGTACTGCAGCTCATaGAAGCGGCGCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLQYCSS*KRRMKR
Trigger: GCGCTTCATGCGCCGCTTCAATGAGCTGCAGTACTG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGAGAGAGGCACAGGGTaGTGGCTTCGGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHERGTG*WLRQWC
Trigger: GCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAGCCTGGCCCAACAGGCCAGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VSITSHPQKTPEAWPNRPVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...TGGCCTGTTGGGCCAGGCTTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTCCCCACTGCCTGCTGTaGGAAGAAAGCTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESPHCLL*EESCGK
Trigger: CTTTCCACAGCTTTCTTCCAACAGCAGGCAGTGGGG...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp GCCAGACAAGTGCCTCCTGCTGCCAGGACTCAGGGCAATAGCAAGGCAAGAGGGGACTGTAAAGTCCTATaGGACCACCACGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ARQVPPAARTQGNSKARGDCKVL*DHHGEL
Trigger: CAGCTCCCCGTGGTGGTCCAATAGGACTTTACAGTC...CCCTCTTGCCTTGCTATTGCCCTGAGTCCTGGCAGCAGGAGGCACTTGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCCCGTGGCACTTGGTTTCTGTTGTGTCGCTGGGCTGGGCTCACCCTAGAGTCTGACTGTAAAGTCCTATaGGACCACCACGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PRGTWFLLCRWAGLTLESDCKVL*DHHGEL
Trigger: CAGCTCCCCGTGGTGGTCCAATAGGACTTTACAGTC...AGACTCTAGGGTGAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACAGCACAGGACTGCCCTaGGCTGTCACCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHSTGLP*AVTSAT
Trigger: TGTAGCAGAGGTGACAGCCAAGGGCAGTCCTGTGCT...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGGCACTTGGTTTCTGTaGTGTCGCTGGGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQGTWFL*CRWAGL
Trigger: GAGCCCAGCCCAGCGACACAACAGAAACCAAGTGCC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATACCACGAAGTGCCCTaGTCCCCCTGGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: STSTTLPCSSSRMVFASTYHEVP*SPWTRS
Trigger: GGACCGTGTCCAGGGGGACAAGGGCACTTCGTGGTA...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS GCA 90 bp CCGCTTTATTTCTTCCCTCTGCGCCATCACACGTGCGGTTCCCACTaGCTGGAGTACTGTCCATCCTGGCCAGCTCTGAAGCCATCCATG +
Preference number: 5 (lower is better)
Translates to: PLYFFPLRHHTCGSH*LEYCPSWPALKPSM
Trigger: CATGGATGGCTTCAGAGCTGGCCAGGATGGACAGTACTCCAGGCAGTGGGAACCGCACGTGTGATGGCGCAGAGGGAAGAAATAAAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTGEPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCC...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp AGTTGGCTCTTCCCCTCCCGTTTTCAGGAGCGGACTACAGTTGGAAGAGCCGACTACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: SWLFPSRFQERTTVGRADYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...GTCGGCTCTTCCAACTGTAGTCCGCTCCTGAAAACGGGAGGGGAAGAGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: SLLHTTSQRTPLSTHSWGPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...GCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCCACCAGGTCTGAGAGTTTCTGGAGGAAGCTGGTGGCCACAGGGTCAGTGTGGCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: PTRSESFWRKLVATGSVWPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...CCACACTGACCCTGTGGCCACCAGCTTCCTCCAGAAACTCTCAGACCTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCGTGGTCACCAGCCCCTaGCCATGGGTCACCACGTTG +
Preference number: 5 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTVVTSP*PWVTTL
Trigger: CAACGTGGTGACCCATGGCAAGGGGCTGGTGACCAC...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TCCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCATTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: STESLAQLWPACEYLGPAFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...TGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCTGCTCCCTCAGCAGGTaGCTGAGTCGGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTCSLSR*LSRVSL
Trigger: CAGGGACACCCGACTCAGCAACCTGCTGAGGGAGCA...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPTWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCACCTGGTGGATACTGTaGAAGAGGCTCCAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GVETSLLHTTSQRTPLSTTWWIL*KRLQSW
Trigger: CCACGACTGGAGCCTCTTCAACAGTATCCACCAGGT...GGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAAATGAAGCGCTCCAGGTaGGCGGTGGTGACATCCCGC +
Preference number: 5 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEMKRSR*AVVTSR
Trigger: GCGGGATGTCACCACCGCCAACCTGGAGCGCTTCAT...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AACAGGCCAGGACGAGCTCAAGTGTGGAAAAGCGGGGATTGCAGTTGGGAAGAAACAGGAGGGGAGAGCTaGGCGAGGGCCAGTCGGTAT +
Preference number: 5 (lower is better)
Translates to: NRPGRAQVWKSGDCSWEETGGES*ARASRY
Trigger: ATACCGACTGGCCCTCGCCAAGCTCTCCCCTCCTGT...TTCTTCCCAACTGCAATCCCCGCTTTTCCACACTTGAGCTCGTCCTGGCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACATGAAGGTCATGTCTTaGAGAAGAAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PRRALPSCGQPVSILARHMKVMS*RRRGMK
Trigger: CTTCATGCCCCTTCTTCTCAAAGACATGACCTTCAT...GTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCGAGAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLESSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTC...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACGAGAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHESSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTC...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ACGGAGAGCCTTGCCCAGCTGTGGCCAGCCTGTGAGTATCTTGGCCCGGCACACGGAAGAAGCTGTCAGTaGCATCTGGACTGTAAAGTC +
Preference number: 5 (lower is better)
Translates to: TESLAQLWPACEYLGPAHGRSCQ*HLDCKV
Trigger: GACTTTACAGTCCAGATGCAACTGACAGCTTCTTCC...GTGTGCCGGGCCAAGATACTCACAGGCTGGCCACAGCTGGGCAAGGCTCTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AGGCAGCACAAACTCCCAGCATGGGGCCACCGTAACATGGAGCCTTTCCCCGCTAAGCGGGGATTGCAGTaGGGAAGAAGCTGTCAGTTG +
Preference number: 5 (lower is better)
Translates to: RQHKLPAWGHRNMEPFPAKRGLQ*GRSCQL
Trigger: CAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTT...AGCGGGGAAAGGCTCCATGTTACGGTGGCCCCATGCTGGGAGTTTGTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CACGGCAAGGGAACTGGTTTGGTTACCACTGCCATCTGCTGCACCTCAGTCTCTCTGGCTGGCTGGCTTTaGCCGAGACACCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: HGKGTGLVTTAICCTSVSLAGWL*PRHQQT
Trigger: TGTCTGCTGGTGTCTCGGCAAAAGCCAGCCAGCCAG...AGAGACTGAGGTGCAGCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTCGGCCCCCGTGGCACTaGGTTTCTGTTGTGTCGCTG +
Preference number: 5 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSRPPWH*VSVVSL
Trigger: CAGCGACACAACAGAAACCAAGTGCCACGGGGGCCG...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CGCGGAAGCTTCAGCATTGTTTCTATCACAAGCCACCCCCAGAAGACCCCAGAACACACCACCCCACGCTaGGGCAGTCAGGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: RGSFSIVSITSHPQKTPEHTTPR*GSQGDR
Trigger: TCTGTCTCCCTGACTGCCCAAGCGTGGGGTGGTGTG...TTCTGGGGTCTTCTGGGGGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCACTTCTCAACACCATGTaGAGTAGTGTCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSLLNTM*SSVPSG
Trigger: GCCGGAGGGGACACTACTCAACATGGTGTTGAGAAG...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCC +
Preference number: 5 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSADSHN*APGMDP
Trigger: GGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGC...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHGEPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000549151.5
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCTACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTACCACGAAGTGCCCTaGTCCCCCTGGCTGAACAAC +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHYHEVP*SPWLNN
Trigger: GTTGTTCAGCCAGGGGGACAAGGGCACTTCGTGGTA...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCACCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: RYSWLGSTPRSSLAASHHPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...GTGATGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTGGGGCCTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LYCTQRPSALHSPPTPGASLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...GGCCCCAGGAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CAGCCTGTGAGTATCTTGGCCCGGCACACCCTGGCTTTCCCGGCTGCAAGTGCCATGAAGGTCATGTCTTaGAGAAGAAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: QPVSILARHTLAFPAASAMKVMS*RRRGMK
Trigger: CTTCATGCCCCTTCTTCTCAAAGACATGACCTTCAT...GGCACTTGCAGCCGGGAAAGCCAGGGTGTGCCGGGCCAAGATACTCACAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACGAGAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHESSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTC...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACAGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: STSTTLPCSSSRMVFASTVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...TGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCGTGGAGACCTCTCTATaGCACACAACGTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALVETSL*HTTSQR
Trigger: GCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCAC...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCCCCACTGCCTGCTGTaGGAAGAAAGCTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTPHCLL*EESCGK
Trigger: CTTTCCACAGCTTTCTTCCAACAGCAGGCAGTGGGG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCGCGGAAGCTTCAGCATaGTTTCTATCACAAGCCACC +
Preference number: 5 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSAEASA*FLSQAT
Trigger: GGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGC...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATTTCCTGGAAGTCTGTaGGGCCTCAACAAGCGACGG +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSFPGSL*GLNKRR
Trigger: CCGTCGCTTGTTGAGGCCCAACAGACTTCCAGGAAA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCGGCAAGGGAACTGGTTaGGTTACCACTGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSGKGTG*VTTAIC
Trigger: GCAGATGGCAGTGGTAACCAAACCAGTTCCCTTGCC...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATGCACATCACGGGTTGTaGAACTGCTCTGCCCCTTGC +
Preference number: 5 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNAHHGL*NCSAPC
Trigger: GCAAGGGGCAGAGCAGTTCAACAACCCGTGATGTGC...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp AAAGACCCTTCCAGGCTAAGGGATAAGTGCAAAGGCCCTGAGGGGAGAACGGGCACTGCACATCACGGGTaGTTGAACTGCTCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: KDPSRLRDKCKGPEGRTGTAHHG*LNCSAP
Trigger: AGGGGCAGAGCAGTTCAACAACCCGTGATGTGCAGT...GCCCGTTCTCCCCTCAGGGCCTTTGCACTTATCCCTTAGCCTGGAAGGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS TCA 90 bp ACACAGCATTCACACCACCAGAGGGCTCTGCTTGCCACATTCACCTaGGCTCAGGTAAGGCACCTGGGACCAAGGATCCAGGAGAAGACA +
Preference number: 5 (lower is better)
Translates to: TQHSHHQRALLATFT*AQVRHLGPRIQEKT
Trigger: TGTCTTCTCCTGGATCCTTGGTCCCAGGTGCCTTACCTGAGCTCAGGTGAATGTGGCAAGCAGAGCCCTCTGGTGGTGTGAATGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395360.6
CDS GCA 90 bp CAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTTaGCTCCACATCCTGGAGAACAGGCCACATCCCATGCTCAACTCA +
Preference number: 5 (lower is better)
Translates to: QHQHHFAMFFQPHGL*LHILENRPHPMLNS
Trigger: TGAGTTGAGCATGGGATGTGGCCTGTTCTCCAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGCATCACCTGCAGAATaGACCTTCACCAGCACCTGC +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHASPAE*TFTSTC
Trigger: GCAGGTGCTGGTGAAGGTCAATTCTGCAGGTGATGC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTGCACTTCCTGTGGGTaGACAACAAAGAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPCTSCG*TTKRRS
Trigger: TGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGCA...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp AGTCGGTATACCCGGTGGTTCCATGAGGGATCCCAGGCTCTGTCACAGGCGAACTGCACTTCCTGTGGGTaGACAACAAAGAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: SRYTRWFHEGSQALSQANCTSCG*TTKRRS
Trigger: TGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGCA...GTTCGCCTGTGACAGAGCCTGGGATCCCTCATGGAACCACCGGGTATACCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548434.1
CDS-3UTR CAA 90 bp TTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGAGAGAGGCACAGGGTaGTGGCTTCGGCAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: FAMFFQPHGLCLHILDDTERGTG*WLRQWC
Trigger: GCACCACTGCCGAAGCCACAACCCTGTGCCTCTCTC...CGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp AGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACGAGAGTTCCCGCTGGTaGTCAATGACCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHLVWRPLYCTQRPSALHESSRW*SMTFSC
Trigger: GCAGCTGAAGGTCATTGACAACCAGCGGGAACTCTC...GTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: SGVETSLLHTTSQRTPLSLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...GGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: LGHSLFLARVHSEVLLSCLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...GCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTCCCTTCCTTGGCCTaGGGTCATTCGTTATTCCTG +
Preference number: 5 (lower is better)
Translates to: WRPLYCTQRPSALHSPPTLPSLA*GHSLFL
Trigger: CAGGAATAACGAATGACCCAAGGCCAAGGAAGGGAG...AGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACAAGCGGGGATTGCAGTaGGGAAGAAGCTGTCAGTTG +
Preference number: 5 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHKRGLQ*GRSCQL
Trigger: CAACTGACAGCTTCTTCCCAACTGCAATCCCCGCTT...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCAGGAGCGGACTACAGTaGGAAGAGCCGACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCRSGLQ*EEPTPV
Trigger: CACTGGAGTCGGCTCTTCCAACTGTAGTCCGCTCCT...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GGAAGACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCAGCAGTTATGTGACCTaGGGCAAACCTGCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GRHLVWRPLYCTQRPSALSSYVT*GKPACA
Trigger: GGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCT...GAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS TCA 90 bp ACCTTGATGATACGGTTGAAGTCCTGCTTGTCCACACGCAGGAAATaGCAGTTGTCTTCTCGCAGGATGATGGTGGCTGCCCGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: TLMIRLKSCLSTRRK*QLSSRRMMVAARGA
Trigger: TGCACCCCGGGCAGCCACCATCATCCTGCGAGAAGACAACTGTCATTTCCTGCGTGTGGACAAGCAGGACTTCAACCGTATCATCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS-3UTR CAA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCC +
Preference number: 5 (lower is better)
Translates to: QSIALPYISKSQGPLQSSADSHN*APGMDP
Trigger: GGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGC...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACCCACTCTTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GDLSIAHNVPAHSTLHPLFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...GAGTGGGTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTGCACTTCCTGTGGGTaGACAACAAAGAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASCTSCG*TTKRRS
Trigger: TGAGCGTCTCTTTGTTGTCAACCCACAGGAAGTGCA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CCTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCATGAAGGTCATGTCTTaGAGAAGAAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: PWPWVIRYSWLGSTPRSSMKVMS*RRRGMK
Trigger: CTTCATGCCCCTTCTTCTCAAAGACATGACCTTCAT...GGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTCGTATGACCAGAGCTaGCTGGGACCATTCTCAACA +
Preference number: 5 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHSYDQS*LGPFST
Trigger: TGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCATCGTATGACCAGAGCTaGCTGGGACCATTCTCAACA +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSSYDQS*LGPFST
Trigger: TGTTGAGAATGGTCCCAGCAAGCTCTGGTCATACGA...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp TACTGCCTCATGTGTCGCCTGCACATGGGTGATTCCCAAAACTACCAGCAGTGCCTTCAGTGGCGTCCATaGTCTGCTGGAGAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: YCLMCRLHMGDSQNYQQCLQWRP*SAGESP
Trigger: TGGGCTTTCTCCAGCAGACAATGGACGCCACTGAAG...GCACTGCTGGTAGTTTTGGGAATCACCCATGTGCAGGCGACACATGAGGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TGGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGGTGCCAGACATCACTGTATAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: WPPTEALGSSLGCQTSLYNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...ATACAGTGATGTCTGGCACCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547856.5
CDS-3UTR CAA 90 bp GTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: VIRYSWLGSTPRSSLAASSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...ACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTCTCCACTTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: WCGDLSIAHNVPAHSTLHFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...GTGGAGAGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QSIALPYISKSQGPLQSSSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGAGCACCAGCACCACTTaGCCATGTTCTTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FAMFFQPHGLCLHILDDTSTSTT*PCSSSR
Trigger: GCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCT...CGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp CTTGGCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTATGAAGGTCATGTCTTaGAGAAGAAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LGLGSFVIPGSGPLRGPPMKVMS*RRRGMK
Trigger: CTTCATGCCCCTTCTTCTCAAAGACATGACCTTCAT...AGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGGGAAGAAGCTGTCAGTaGCATCTGGACTGTAAAGTC +
Preference number: 5 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQGRSCQ*HLDCKV
Trigger: GACTTTACAGTCCAGATGCAACTGACAGCTTCTTCC...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTCGACCCCCATCAGCTTaGATAAGGGGATCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLLSSYVTLGKPACASVSRPPSA*IRGSGG
Trigger: CCCTCCGGATCCCCTTATCAAAGCTGATGGGGGTCG...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CAA 90 bp CTTTCTCCCACCATTCCTCAACCAAATCCTGGCTGCAGTCACATCTTCTCATCCAACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LSPTIPQPNPGCSHIFSSNTVPA*LCGSKS
Trigger: GCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTT...GGATGAGAAGATGTGACTGCAGCCAGGATTTGGTTGAGGAATGGTGGGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GACATCTGGTGTGGAGACCTCTCTATTGCACACAACGTCCCAGCGCACTCCACTTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: DIWCGDLSIAHNVPAHSTSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...AGTGGAGTGCGCTGGGACGTTGTGTGCAATAGAGAGGTCTCCACACCAGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ATGATGGTGGCTGCCCGGGGTGCATCATTCACCAGAGCCAGCTGTCCAAAATCATTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: MMVAARGASFTRASCPKSFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...TGATTTTGGACAGCTGGCTCTGGTGAATGATGCACCCCGGGCAGCCACCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCAAGGGCAGCGCAGAGTaGGGCGCTGGGCATGAAGAC +
Preference number: 5 (lower is better)
Translates to: GESPGSLADLFKTQIRLCKGSAE*GAGHED
Trigger: GTCTTCATGCCCAGCGCCCAACTCTGCGCTGCCCTT...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCTGCCAGTCAATGAAGGTCATGTCTTaGAGAAGAAGGGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: HSLFLARVHSEVLLSCQSMKVMS*RRRGMK
Trigger: CTTCATGCCCCTTCTTCTCAAAGACATGACCTTCAT...TGACTGGCAGCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389212.7
ENST00000405493.6
ENST00000449771.7
ENST00000547856.5
ENST00000549151.5
CDS-3UTR CAA 90 bp ACAGCTGCTAACTGGCAGAGTTGGAATCCCTCCTGCTCCTTTCCCCCTCTGTGCCCACACTTCCGTAGCTaGTCATCTTGCTTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: TAANWQSWNPSCSFPPLCPHFRS*SSCFED
Trigger: ATCTTCAAAGCAAGATGACAAGCTACGGAAGTGTGG...GCACAGAGGGGGAAAGGAGCAGGAGGGATTCCAACTCTGCCAGTTAGCAGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS TCA 90 bp TGCCTCCACATCCTGGAGAACAGGCCACATCCCATGCTCAACTCATaGTGTTCCAGCTTTAGACCCTCTCATCTACCTCCTTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: CLHILENRPHPMLNS*CSSFRPSHLPPSFQ
Trigger: CTGGAATGAAGGAGGTAGATGAGAGGGTCTAAAGCTGGAACATCATGAGTTGAGCATGGGATGTGGCCTGTTCTCCAGGATGTGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS-3UTR CAA 90 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGGTTGAAGCCATGGGTCACCACGTaGACAGATCCCTTCCAGATA +
Preference number: 5 (lower is better)
Translates to: CSSSRMVFASTSLMIRLKPWVTT*TDPFQI
Trigger: TATCTGGAAGGGATCTGTCAACGTGGTGACCCATGG...CTTCAACCGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp CATTACCTCACACTCCATATACCCATCGGATCCTTGCATCCTGCCTCCCAGACCTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: HYLTLHIPIGSLHPASQTSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...GGTCTGGGAGGCAGGATGCAAGGATCCGATGGGTATATGGAGTGTGAGGTAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACTTCTCATCCCCTCTTaGCTTCCCTTTAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPLLIPS*LPFKPQ
Trigger: CTGGGGCTTAAAGGGAAGCAAAGAGGGGATGAGAAG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CCCCCTGCAGCTCTCAACTCCAGTAGTCGCTTACACGGGACACTTTCCCTGAATAACACAAATCAGACTTaGCCAACCTTGGCTCAAACC +
Preference number: 5 (lower is better)
Translates to: PPAALNSSSRLHGTLSLNNTNQT*PTLAQT
Trigger: GGTTTGAGCCAAGGTTGGCAAAGTCTGATTTGTGTT...ATTCAGGGAAAGTGTCCCGTGTAAGCGACTACTGGAGTTGAGAGCTGCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GESPGSLADLFKTQIRLCGEPVE*GISVLE
Trigger: TTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCC...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TGTGTAACAATGACCTCCCTCTGTCCTGTCCTGCCCGGTAGGACACACACGCAGTACAGTTTTATGTGTTaGTCACTAAGCGCTGTATGG +
Preference number: 5 (lower is better)
Translates to: CVTMTSLCPVLPGRTHTQYSFMC*SLSAVW
Trigger: CCATACAGCGCTTAGTGACAAACACATAAAACTGTA...CTGCGTGTGTGTCCTACCGGGCAGGACAGGACAGAGGGAGGTCATTGTTACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS-3UTR CAA 90 bp GCCTTGGGTCATTCGTTATTCCTGGCTCGGGTCCACTCCGAGGTCCTCCTTAGCAAGGAATTTATATGCTaGGGTCTAATCCTGCAAAAG +
Preference number: 5 (lower is better)
Translates to: ALGHSLFLARVHSEVLLSKEFIC*GLILQK
Trigger: CTTTTGCAGGATTAGACCCAAGCATATAAATTCCTT...GCTAAGGAGGACCTCGGAGTGGACCCGAGCCAGGAATAACGAATGACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CAA 90 bp GGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTTGCCTTCTCAACACCATGTaGAGTAGTGTCCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GESPGSLADLFKTQIRLCLLNTM*SSVPSG
Trigger: GCCGGAGGGGACACTACTCAACATGGTGTTGAGAAG...GCAAAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TTTGCCATGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTTGATGATACGTCCTTGATGATACGGTaGAAGTCCTGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: FAMFFQPHGLCLHILDDTSLMIR*KSCLST
Trigger: TGTGGACAAGCAGGACTTCAACCGTATCATCAAGGA...CGTATCATCAAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495465.6
ENST00000547856.5
CDS-3UTR CAA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCATTTGCCTCCACATCCTaGATGATACGGTTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPFASTS*MIRLKS
Trigger: GGACTTCAACCGTATCATCAAGGATGTGGAGGCAAA...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp CTGCTATTAAGCAGTTATGTGACCTTGGGCAAACCTGCCTGTGCCTCAGTTTCTGCGGAAGCTTCAGCATaGTTTCTATCACAAGCCACC +
Preference number: 5 (lower is better)
Translates to: LLLSSYVTLGKPACASVSAEASA*FLSQAT
Trigger: GGTGGCTTGTGATAGAAACAATGCTGAAGCTTCCGC...AGAAACTGAGGCACAGGCAGGTTTGCCCAAGGTCACATAACTGCTTAATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449771.7
CDS-3UTR CAA 90 bp CAATCCATTGCTCTTCCCTACATTTCCAAATCTCAGGGACCCCTGCAGAGTTCCTCGGACCTCAATCCATaGCTCTTCCCTACATTTCCA +
Preference number: 5 (lower is better)
Translates to: QSIALPYISKSQGPLQSSSDLNP*LFPTFP
Trigger: TGGAAATGTAGGGAAGAGCAATGGATTGAGGTCCGA...GGAACTCTGCAGGGGTCCCTGAGATTTGGAAATGTAGGGAAGAGCAATGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp GCTGGAGAAAGCCCAGGCTCTTTAGCTGACCTATTCAAAACACAAATCAGACTTGAATCTGCACTGGAGTaGGCTCTTCCCCTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: AGESPGSLADLFKTQIRLESALE*ALPLPF
Trigger: AAACGGGAGGGGAAGAGCCAACTCCAGTGCAGATTC...AAGTCTGATTTGTGTTTTGAATAGGTCAGCTAAAGAGCCTGGGCTTTCTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS-3UTR CAA 90 bp TCCCAGGCTCTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCACAGACTTTGCCAACCTaGGCTCAAACCCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: SQALPVGMNYLPKGIKGPQTLPT*AQTPLM
Trigger: CATTAAAGGGGTTTGAGCCAAGGTTGGCAAAGTCTG...TGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAGAGCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS TCA 90 bp TGCCTGGCATATAGTTGTATGCACATGTTAGCTAGTACTCATCTGTaGGGCATTAGGGTGGGGCTGCTTGCTGGAAAGCGTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CLAYSCMHMLASTHL*GIRVGLLAGKRLSS
Trigger: AGAAGAAAGACGCTTTCCAGCAAGCAGCCCCACCCTAATGCCTCACAGATGAGTACTAGCTAACATGTGCATACAACTATATGCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS-3UTR CAA 90 bp TGCAGCCTCAATACCTACTCAGGAGTCATGCCAGGGGCCATGAGTTCTCTCTCTTACAGTTTTATGTGTTaGTCACTAAGCGCTGTATGG +
Preference number: 5 (lower is better)
Translates to: CSLNTYSGVMPGAMSSLSYSFMC*SLSAVW
Trigger: CCATACAGCGCTTAGTGACAAACACATAAAACTGTA...AGAGAGAGAACTCATGGCCCCTGGCATGACTCCTGAGTAGGTATTGAGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405493.6
ENST00000449771.7
CDS GCA 90 bp TTGGGAGAATTAAATGAGTTGCTACACATCGAATGTTTAAAGCATTaGCTGGCATATAGTTGTATGCACATGTTAGCTAGTACTCATCTG +
Preference number: 5 (lower is better)
Translates to: LGELNELLHIECLKH*LAYSCMHMLASTHL
Trigger: CAGATGAGTACTAGCTAACATGTGCATACAACTATATGCCAGGCAATGCTTTAAACATTCGATGTGTAGCAACTCATTTAATTCTCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS CCA 72 bp CACCTGGCCAGCCCACCTGTGACACGGGGAGGAAAGTaGACAGCCATGGGACACGACTGGGGCGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: HLASPPVTRGGK*TAMGHDWGGWA
Trigger: GGCCCAGCCGCCCCAGTCGTGTCCCATGGCTGTCCACTTTCCTCCCCGTGTCACAGGTGGGCTGGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495953.2
ENST00000549347.1
CDS GCA 72 bp CGGTCTCGGATGAGGTTTGGGCAGGTGGCCAGCAGATaGCGATGCAGCTGCCTCCCAGCCCTGAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: RSRMRFGQVASR*RCSCLPALSTR
Trigger: GCGGGTGCTCAGGGCTGGGAGGCAGCTGCATCGGCATCTGCTGGCCACCTGCCCAAACCTCATCCGAGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS CAA 72 bp GAGCATGGCAGGTGTATTACCGGTTCCTGCCTGGGGTaGGGGGTCGGGAAGGGCCGGCGCCCTGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: EHGRCITGSCLG*GVGKGRRPERL
Trigger: GAGCCTCTCAGGGCGCCGGCCCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAATACACCTGCCATGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CAA 90 bp GTGGAGAGGGAGCATGGCAGGTGTATTACCGGTTCCTGCCTGGGGTaGGGGGTCGGGAAGGGCCGGCGCCCTGAGAGGCTCTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: VEREHGRCITGSCLG*GVGKGRRPERLSPA
Trigger: TGCTGGAGAGAGCCTCTCAGGGCGCCGGCCCTTCCCGACCCCCAACCCCAGGCAGGAACCGGTAATACACCTGCCATGCTCCCTCTCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CAA 72 bp CACGGGCTCGGGCTCGGGCCCGGGGAACCGGTAGAATaGGGCATCTCGGTCCTGGAAGGCCCAGTCGTGTTT +
Preference number: 6 (lower is better)
Translates to: HGLGLGPGEPVE*GISVLEGPVVF
Trigger: AAACACGACTGGGCCTTCCAGGACCGAGATGCCCAATTCTACCGGTTCCCCGGGCCCGAGCCCGAGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000548919.5
ENST00000549151.5
CDS TCA 72 bp TTCTACTGGTCTAGCCCGCAAGCCCCTCGGAGTTCCTaGGGGGCAGACAGGCCCTGGTGCACACAGGCGCTC +
Preference number: 6 (lower is better)
Translates to: FYWSSPQAPRSS*GADRPWCTQAL
Trigger: GAGCGCCTGTGTGCACCAGGGCCTGTCTGCCCCTCAGGAACTCCGAGGGGCTTGCGGGCTAGACCAGTAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476259.1
CDS CCA 72 bp TGGATGGCACAGCTGCTGCCAGGAAGGGGCTCGTCCTaGTTGGGGAGCCAAACAGGCAAGTTCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: WMAQLLPGRGSS*LGSQTGKFRAW
Trigger: CCAGGCCCGGAACTTGCCTGTTTGGCTCCCCAACCAGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395360.6
CDS TCA 72 bp GCCTGGCCCAGGGCACCACATGCAGCAAGGGCCCCGTaGACACCTATCAGAGACCCAAGGGTGTGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: AWPRAPHAARAP*TPIRDPRVCLW
Trigger: CCACAGACACACCCTTGGGTCTCTGATAGGTGTTCACGGGGCCCTTGCTGCATGTGGTGCCCTGGGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS GCA 72 bp CACACCACGGGCATCTGGCTGCAGGCCAATGGCATCTaGAAAGACAGCAGAGGCGGACTGGGTGGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: HTTGIWLQANGI*KDSRGGLGGGR
Trigger: CCTTCCCCCACCCAGTCCGCCTCTGCTGTCTTTGCAGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS CAA 90 bp CCAGCTCTGAAGCCATCCATGGAAATGCACTCCGGACCACGGGGCTaGCTCCCTCCTCCACAGGACCAGCACTCACTCTCCACCGGCAGC +
Preference number: 6 (lower is better)
Translates to: PALKPSMEMHSGPRG*LPPPQDQHSLSTGS
Trigger: GCTGCCGGTGGAGAGTGAGTGCTGGTCCTGTGGAGGAGGGAGCAAGCCCCGTGGTCCGGAGTGCATTTCCATGGATGGCTTCAGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS TCA 72 bp AGCTTCGGGGCCGGTGCATCCTTCTCAACACCATGTTaGGTAGTGTCCCCTCCGGCACCACGTCAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: SFGAGASFSTPC*VVSPPAPRQGG
Trigger: CCCTCCCTGACGTGGTGCCGGAGGGGACACTACTCAACATGGTGTTGAGAAGGATGCACCGGCCCCGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000547856.5
ENST00000548919.5
ENST00000549151.5
ENST00000549347.1
CDS GCA 72 bp CCACATGCTCCAGCCCAGTCTTCACACAGGATCTCCTaGCCCCATGCACACACTGAGGGCCAGGATGCACCG +
Preference number: 6 (lower is better)
Translates to: PHAPAQSSHRIS*PHAHTEGQDAP
Trigger: CGGTGCATCCTGGCCCTCAGTGTGTGCATGGGGGCAGGAGATCCTGTGTGAAGACTGGGCTGGAGCATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476259.1
CDS GCA 72 bp GGGTTGAAGTCCTGGGTGGTGCTCAGAATACACAGGTaGATGTGCCCACGCAGCCACGCAGCCCAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: GLKSWVVLRIHR*MCPRSHAAQGS
Trigger: GCTTCCCTGGGCTGCGTGGCTGCGTGGGCACATGCACCTGTGTATTCTGAGCACCACCCAGGACTTCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS CAA 72 bp TCCAGGCTCTCGCTGAAATCCAGGGACTCCTCGCTGTaGGTGAGTGGTGTCCAGCGCAGCCCCTGGATGCAG +
Preference number: 6 (lower is better)
Translates to: SRLSLKSRDSSL*VSGVQRSPWMQ
Trigger: CTGCATCCAGGGGCTGCGCTGGACACCACTCACCAACAGCGAGGAGTCCCTGGATTTCAGCGAGAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS CAA 90 bp GCAGAGGGCACCTTCATCCAGCAGCACCTGGCAGATTCCCACAACTaGGCTCCGGGAATGGACCCCAAGTCCCAGGGCCAAGATCCCATC +
Preference number: 6 (lower is better)
Translates to: AEGTFIQQHLADSHN*APGMDPKSQGQDPI
Trigger: GATGGGATCTTGGCCCTGGGACTTGGGGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGAAGGTGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS TCA 72 bp CCCACTGCCTGGAGTACTGTCCATCCTGGCCAGCTCTaGAGCCATCCATGGAAATGCACTCCGGACCACGGG +
Preference number: 6 (lower is better)
Translates to: PTAWSTVHPGQL*SHPWKCTPDHG
Trigger: CCCGTGGTCCGGAGTGCATTTCCATGGATGGCTTCAGAGCTGGCCAGGATGGACAGTACTCCAGGCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS GCA 72 bp TGGGACACGACTGGGGCGGCTGGGCCACAGTACAACTaGCCCAGGCAGAACTACTTCCTTAGAGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: WDTTGAAGPQYN*PRQNYFLRVLW
Trigger: CCAGAGGACTCTAAGGAAGTAGTTCTGCCTGGGGCAGTTGTACTGTGGCCCAGCCGCCCCAGTCGTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495953.2
ENST00000549347.1
CDS GCA 72 bp AGCCATCCATGGAAATGCACTCCGGACCACGGGGCTTaGTCCCTCCTCCACAGGACCAGCACTCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: SHPWKCTPDHGA*SLLHRTSTHSP
Trigger: TGGAGAGTGAGTGCTGGTCCTGTGGAGGAGGGAGCAAGCCCCGTGGTCCGGAGTGCATTTCCATGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS CCA 72 bp CTCCACAGCCAGGCCCACCTGCCAGCAGCTCTCACCTaGCCAGCCCACCTTCATGTTTCTTTTCCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: LHSQAHLPAALT*PAHLHVSFPVG
Trigger: ACCCACTGGAAAAGAAACATGAAGGTGGGCTGGCCAGGTGAGAGCTGCTGGCAGGTGGGCCTGGCTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389212.7
CDS CCA 72 bp GAGCCTAAGGTGGTACTTCCGGTCTCGGATGAGGTTTaGGCAGGTGGCCAGCAGATGCCGATGCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: EPKVVLPVSDEV*AGGQQMPMQLP
Trigger: AGGCAGCTGCATCGGCATCTGCTGGCCACCTGCCCAAACCTCATCCGAGACCGGAAGTACCACCTTAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS CCA 72 bp GGAAAGTGGACAGCCATGGGACACGACTGGGGCGGCTaGGCCACAGTACAACTGCCCCAGGCAGAACTACTT +
Preference number: 6 (lower is better)
Translates to: GKWTAMGHDWGG*ATVQLPQAELL
Trigger: AAGTAGTTCTGCCTGGGGCAGTTGTACTGTGGCCCAGCCGCCCCAGTCGTGTCCCATGGCTGTCCACTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495953.2
ENST00000549347.1
CDS CAA 72 bp AAGCCATCCATGGAAATGCACTCCGGACCACGGGGCTaGCTCCCTCCTCCACAGGACCAGCACTCACTCTCC +
Preference number: 6 (lower is better)
Translates to: KPSMEMHSGPRG*LPPPQDQHSLS
Trigger: GGAGAGTGAGTGCTGGTCCTGTGGAGGAGGGAGCAAGCCCCGTGGTCCGGAGTGCATTTCCATGGATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS GCA 72 bp CGCCACACAGCATTCACACCACCAGAGGGCTCTGCTTaGCACATTCACCTGAGCTCAGGTAAGGCACCTGGG +
Preference number: 6 (lower is better)
Translates to: RHTAFTPPEGSA*HIHLSSGKAPG
Trigger: CCCAGGTGCCTTACCTGAGCTCAGGTGAATGTGGCAAGCAGAGCCCTCTGGTGGTGTGAATGCTGTGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395360.6
CDS GCA 72 bp CGACCCCCATCAGCTTTGATAAGGGGATCCGGAGGGTaGCAGTGGGTAAGTCCAGGTACAGTGAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: RPPSALIRGSGG*QWVSPGTVNWA
Trigger: GGCCCAGTTCACTGTACCTGGACTTACCCACTGGCACCCTCCGGATCCCCTTATCAAAGCTGATGGGGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449771.7
ENST00000479866.5
ENST00000482843.5
CDS GCA 72 bp TTCTTCCCTCTGCGCCATCACACGTGCGGTTCCCACTaGCTGGAGTACTGTCCATCCTGGCCAGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: FFPLRHHTCGSH*LEYCPSWPALK
Trigger: CTTCAGAGCTGGCCAGGATGGACAGTACTCCAGGCAGTGGGAACCGCACGTGTGATGGCGCAGAGGGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS CCA 72 bp GCTGCAGGCCAATGGCATCTTTATCCCCAACTTGGATaGCACAGCTGCTGCCAGGAAGGGGCTCGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: AAGQWHLYPQLG*HSCCQEGARPG
Trigger: ACCAGGACGAGCCCCTTCCTGGCAGCAGCTGTGCCATCCAAGTTGGGGATAAAGATGCCATTGGCCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548919.5
CDS TCA 72 bp TCACACCACCAGAGGGCTCTGCTTGCCACATTCACCTaGGCTCAGGTAAGGCACCTGGGACCAAGGATCCAG +
Preference number: 6 (lower is better)
Translates to: SHHQRALLATFT*AQVRHLGPRIQ
Trigger: CTGGATCCTTGGTCCCAGGTGCCTTACCTGAGCTCAGGTGAATGTGGCAAGCAGAGCCCTCTGGTGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395360.6
CDS GCA 72 bp AGCCCCAGAGATGTGGCCACACCACGGGCATCTGGCTaGAGGCCAATGGCATCTTTATCCCCAACTTGGATG +
Preference number: 6 (lower is better)
Translates to: SPRDVATPRASG*RPMASLSPTWM
Trigger: CATCCAAGTTGGGGATAAAGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548919.5
CDS CCA 72 bp TTCACATGGCAGAGGGCACCTTCATCCAGCAGCACCTaGCAGATTCCCACAACTTGGCTCCGGGAATGGACC +
Preference number: 6 (lower is better)
Translates to: FTWQRAPSSSST*QIPTTWLREWT
Trigger: GGTCCATTCCCGGAGCCAAGTTGTGGGAATCTGCCAGGTGCTGCTGGATGAAGGTGCCCTCTGCCATGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389212.7
ENST00000395358.7
ENST00000405493.6
ENST00000449771.7
ENST00000466322.5
ENST00000479866.5
ENST00000482843.5
ENST00000495953.2
ENST00000548919.5
ENST00000549151.5
CDS CCA 72 bp CCATCAGCTTTGATAAGGGGATCCGGAGGGTGCCAGTaGGTAAGTCCAGGTACAGTGAACTGGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PSALIRGSGGCQ*VSPGTVNWASA
Trigger: GGCACTGGCCCAGTTCACTGTACCTGGACTTACCCACTGGCACCCTCCGGATCCCCTTATCAAAGCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449771.7
ENST00000479866.5
ENST00000482843.5
CDS CCA 72 bp ATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTaGCTGCAGGCCAATGGCATCTGCAAAGACAGCAGA +
Preference number: 6 (lower is better)
Translates to: IEPQRCGHTTGI*LQANGICKDSR
Trigger: TCTGCTGTCTTTGCAGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS CCA 72 bp ACGTGCGGTTCCCACTGCCTGGAGTACTGTCCATCCTaGCCAGCTCTGAAGCCATCCATGGAAATGCACTCC +
Preference number: 6 (lower is better)
Translates to: TCGSHCLEYCPS*PALKPSMEMHS
Trigger: GGAGTGCATTTCCATGGATGGCTTCAGAGCTGGCCAGGATGGACAGTACTCCAGGCAGTGGGAACCGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS CAA 72 bp CGAAGTGCCCTTGTCCCCCTGGACACGGTCCCTGCCTaGCTGTGTGGTTCAAAGAGCAGAACAGCCGCTAAT +
Preference number: 6 (lower is better)
Translates to: RSALVPLDTVPA*LCGSKSRTAAN
Trigger: ATTAGCGGCTGTTCTGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTCCAGGGGGACAAGGGCACTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS CAA 90 bp CCAGCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATGGTCTTaGCCTCCACATCCTGGAGAACAGGCCACATCCCATGCTCAACTC +
Preference number: 6 (lower is better)
Translates to: PAPAPLCHVLPAAWS*PPHPGEQATSHAQL
Trigger: GAGTTGAGCATGGGATGTGGCCTGTTCTCCAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS GCA 72 bp GAAGTGCCCTTGTCCCCCTGGACACGGTCCCTGCCTTaGTGTGTGGTTCAAAGAGCAGAACAGCCGCTAATT +
Preference number: 6 (lower is better)
Translates to: EVPLSPWTRSLP*CVVQRAEQPLI
Trigger: AATTAGCGGCTGTTCTGCTCTTTGAACCACACAGCAAGGCAGGGACCGTGTCCAGGGGGACAAGGGCACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS GCA 72 bp ACAGTTTCCCAAAGCGGCCGCTTTATTTCTTCCCTCTaGGCCATCACACGTGCGGTTCCCACTGCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: TVSQSGRFISSL*AITRAVPTAWS
Trigger: ACTCCAGGCAGTGGGAACCGCACGTGTGATGGCGCAGAGGGAAGAAATAAAGCGGCCGCTTTGGGAAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548919.5
ENST00000549151.5
CDS CCA 72 bp GCACCAGCACCACTTTGCCATGTTCTTCCAGCCGCATaGTCTTTGCCTCCACATCCTGGAGAACAGGCCACA +
Preference number: 6 (lower is better)
Translates to: APAPLCHVLPAA*SLPPHPGEQAT
Trigger: TGTGGCCTGTTCTCCAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACATGGCAAAGTGGTGCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS CCA 72 bp CACATCCTGGTCCCTCAATACCTCTCCATCCACAAGTaGCCAGAGGGCAGGGATATGACACAGGGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: HILVPQYLSIHK*PEGRDMTQGKG
Trigger: TCCCTTCCCCTGTGTCATATCCCTGCCCTCTGGCCACTTGTGGATGGAGAGGTATTGAGGGACCAGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CCA 72 bp ATTGAGCCCCAGAGATGTGGCCACACCACGGGCATCTaGCTGCAGGCCAATGGCATCTTTATCCCCAACTTG +
Preference number: 6 (lower is better)
Translates to: IEPQRCGHTTGI*LQANGIFIPNL
Trigger: CAAGTTGGGGATAAAGATGCCATTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCTCTGGGGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548919.5
CDS CAA 72 bp ACAGATCCCTTCCAGATAATGTACCACGAAGTGCCCTaGTCCCCCTGGACACGGTCCCTGCCTTGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: TDPFQIMYHEVP*SPWTRSLPCCV
Trigger: CACACAGCAAGGCAGGGACCGTGTCCAGGGGGACAAGGGCACTTCGTGGTACATTATCTGGAAGGGATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495465.6
CDS CAA 90 bp CTACCTGTGGGCATGAATTACCTCCCAAAAGGAATAAAAGGCCCATaGAGTCAGGGAGTGGGCGAGGAGGGAGGCCACCTTAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LPVGMNYLPKGIKGP*SQGVGEEGGHLRPL
Trigger: CAGAGGCCTAAGGTGGCCTCCCTCCTCGCCCACTCCCTGACTCAATGGGCCTTTTATTCCTTTTGGGAGGTAATTCATGCCCACAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS CAA 90 bp TGGGGTGCCAGACATCACTGTATACCTAGCAGAAATGGCCAATCTTaGGCACTGGTGCCACTACTCCCCACTCCCACACCTGGGCAGACA +
Preference number: 6 (lower is better)
Translates to: WGARHHCIPSRNGQS*ALVPLLPTPTPGQT
Trigger: TGTCTGCCCAGGTGTGGGAGTGGGGAGTAGTGGCACCAGTGCCAAAGATTGGCCATTTCTGCTAGGTATACAGTGATGTCTGGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CAA 90 bp GGTGCTGTTTGGGAGGCTGAGAGGTTGTTTCTCCTAGTAGCGGGGTaGAAGTCCTGGGTGGTGCTCAGAATACACAGGTGCATGTGCCCA +
Preference number: 6 (lower is better)
Translates to: GAVWEAERLFLLVAG*KSWVVLRIHRCMCP
Trigger: TGGGCACATGCACCTGTGTATTCTGAGCACCACCCAGGACTTCAACCCCGCTACTAGGAGAAACAACCTCTCAGCCTCCCAAACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS CCA 72 bp TCACCTGGCCAGCCCACCTTCATGTTTCTTTTCCAGTaGGTAAGTCCAGGTACAGTGAACTGGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SPGQPTFMFLFQ*VSPGTVNWASA
Trigger: GGCACTGGCCCAGTTCACTGTACCTGGACTTACCCACTGGAAAAGAAACATGAAGGTGGGCTGGCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389212.7
CDS CCA 72 bp CACCTGTTGGGTCATGAGCACTGGAATCTGGTCCCATaGCCTCCAACAGAAGCTCTAGGATCTTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: HLLGHEHWNLVP*PPTEALGSSLG
Trigger: CCCCAGAGAAGATCCTAGAGCTTCTGTTGGAGGCCATGGGACCAGATTCCAGTGCTCATGACCCAACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494764.1
CDS CAA 72 bp TGGGAGGCTGAGAGGTTGTTTCTCCTAGTAGCGGGGTaGAAGTCCTGGGTGGTGCTCAGAATACACAGGTGC +
Preference number: 6 (lower is better)
Translates to: WEAERLFLLVAG*KSWVVLRIHRC
Trigger: GCACCTGTGTATTCTGAGCACCACCCAGGACTTCAACCCCGCTACTAGGAGAAACAACCTCTCAGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS TCA 72 bp GAGGAAAGAAACTGGGGCCAGGCAGACACCTTCATCTaGGGAGATGCATTCCCACAGCCATTCTCCAACCTG +
Preference number: 6 (lower is better)
Translates to: EERNWGQADTFI*GDAFPQPFSNL
Trigger: CAGGTTGGAGAATGGCTGTGGGAATGCATCTCCTCAGATGAAGGTGTCTGCCTGGCCCCAGTTTCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395358.7
CDS GCA 72 bp GAGCCTGAAGTCACTGGTCTCACTGAACTCCTTCTGTaGCTTATGGGCTTCACCTTCTCACACACACCCAGG +
Preference number: 6 (lower is better)
Translates to: EPEVTGLTELLL*LMGFTFSHTPR
Trigger: CCTGGGTGTGTGTGAGAAGGTGAAGCCCATAAGGCACAGAAGGAGTTCAGTGAGACCAGTGACTTCAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS CCA 72 bp ACTGTATACCTAGCAGAAATGGCCAATCTTTGGCACTaGTGCCACTACTCCCCACTCCCACACCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: TVYLAEMANLWH*CHYSPLPHLGR
Trigger: TCTGCCCAGGTGTGGGAGTGGGGAGTAGTGGCACCAGTGCCAAAGATTGGCCATTTCTGCTAGGTATACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CCA 72 bp GAGAGGTTGTTTCTCCTAGTAGCGGGGTTGAAGTCCTaGGTGGTGCTCAGAATACACAGGTGCATGTGCCCA +
Preference number: 6 (lower is better)
Translates to: ERLFLLVAGLKS*VVLRIHRCMCP
Trigger: TGGGCACATGCACCTGTGTATTCTGAGCACCACCCAGGACTTCAACCCCGCTACTAGGAGAAACAACCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473777.5
ENST00000488250.5
CDS CCA 72 bp TGTTCTTCCAGCCGCATGGTCTTTGCCTCCACATCCTaGAGAACAGGCCACATCCCATGCTCAACTCATGAT +
Preference number: 6 (lower is better)
Translates to: CSSSRMVFASTS*RTGHIPCSTHD
Trigger: ATCATGAGTTGAGCATGGGATGTGGCCTGTTCTCCAGGATGTGGAGGCAAAGACCATGCGGCTGGAAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS CCA 72 bp GACATCACTGTATACCTAGCAGAAATGGCCAATCTTTaGCACTGGTGCCACTACTCCCCACTCCCACACCTG +
Preference number: 6 (lower is better)
Translates to: DITVYLAEMANL*HWCHYSPLPHL
Trigger: CAGGTGTGGGAGTGGGGAGTAGTGGCACCAGTGCCAAAGATTGGCCATTTCTGCTAGGTATACAGTGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS CAA 72 bp AGACATCACTGTATACCTAGCAGAAATGGCCAATCTTaGGCACTGGTGCCACTACTCCCCACTCCCACACCT +
Preference number: 6 (lower is better)
Translates to: RHHCIPSRNGQS*ALVPLLPTPTP
Trigger: AGGTGTGGGAGTGGGGAGTAGTGGCACCAGTGCCAAAGATTGGCCATTTCTGCTAGGTATACAGTGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479866.5
ENST00000482843.5
ENST00000494764.1
CDS TCA 72 bp ATCCTGGAGAACAGGCCACATCCCATGCTCAACTCATaGTGTTCCAGCTTTAGACCCTCTCATCTACCTCCT +
Preference number: 6 (lower is better)
Translates to: ILENRPHPMLNS*CSSFRPSHLPP
Trigger: AGGAGGTAGATGAGAGGGTCTAAAGCTGGAACATCATGAGTTGAGCATGGGATGTGGCCTGTTCTCCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479866.5
CDS TCA 72 bp TATAGTTGTATGCACATGTTAGCTAGTACTCATCTGTaGGGCATTAGGGTGGGGCTGCTTGCTGGAAAGCGT +
Preference number: 6 (lower is better)
Translates to: YSCMHMLASTHL*GIRVGLLAGKR
Trigger: ACGCTTTCCAGCAAGCAGCCCCACCCTAATGCCTCACAGATGAGTACTAGCTAACATGTGCATACAACTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS CAA 72 bp ATACCGACTCATGAGGTTTTGGGAGAATTAAATGAGTaGCTACACATCGAATGTTTAAAGCATTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: IPTHEVLGELNE*LHIECLKHCLA
Trigger: TGCCAGGCAATGCTTTAAACATTCGATGTGTAGCAACTCATTTAATTCTCCCAAAACCTCATGAGTCGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS CAA 90 bp GCACTAATAATACCGACTCATGAGGTTTTGGGAGAATTAAATGAGTaGCTACACATCGAATGTTTAAAGCATTGCCTGGCATATAGTTGT +
Preference number: 6 (lower is better)
Translates to: ALIIPTHEVLGELNE*LHIECLKHCLAYSC
Trigger: ACAACTATATGCCAGGCAATGCTTTAAACATTCGATGTGTAGCAACTCATTTAATTCTCCCAAAACCTCATGAGTCGGTATTATTAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS GCA 72 bp TTAAATGAGTTGCTACACATCGAATGTTTAAAGCATTaGCTGGCATATAGTTGTATGCACATGTTAGCTAGT +
Preference number: 6 (lower is better)
Translates to: LNELLHIECLKH*LAYSCMHMLAS
Trigger: ACTAGCTAACATGTGCATACAACTATATGCCAGGCAATGCTTTAAACATTCGATGTGTAGCAACTCATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549347.1
CDS CAA 72 bp ATCTACAAAGCACTAATAATACCGACTCATGAGGTTTaGGGAGAATTAAATGAGTTGCTACACATCGAATGT +
Preference number: 6 (lower is better)
Translates to: IYKALIIPTHEV*GELNELLHIEC
Trigger: ACATTCGATGTGTAGCAACTCATTTAATTCTCCCAAAACCTCATGAGTCGGTATTATTAGTGCTTTGTAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549347.1