RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAPGEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107263

Ensembl transcript IDs: ENST00000372189.7, ENST00000372190.7, ENST00000372195.5, ENST00000414781.1, ENST00000419442.1, ENST00000438647.3, ENST00000481260.1, ENST00000683357.1

Found 885 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGGAGGCCCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCACCTGCGTACCTTTCCGGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: KGGPDGASTAGQSTS*GAAKASPAYLSGPA
Trigger: AGCAGGCCCGGAAAGGTACGCAGGTGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGGGCCTCCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp GGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCCTGGATCCCGG +
Preference number: 1 (lower is better)
Translates to: GTPAMRLTGPRSSPV*ELPSAPLEHSPGSR
Trigger: CCGGGATCCAGGAGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 90 bp CATACATCGCACCTTGCCGTCCTCACGCAGGGAGCCCCTGGGCACTaGTCATGTGCTGCCTGGGCCCTGCTGCTCAGAACACCAAGGGCT +
Preference number: 1 (lower is better)
Translates to: HTSHLAVLTQGAPGH*SCAAWALLLRTPRA
Trigger: AGCCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 90 bp GGACCATTCGGGTGCCTCAGGGATGCCCTTCCCTCCCAGGGGCACTaGCAGCACTGGCTGAAAGGTCTGAAGAGCCAGAGGAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: GPFGCLRDALPSQGH*QHWLKGLKSQRRSP
Trigger: AGGGCTCCTCCTCTGGCTCTTCAGACCTTTCAGCCAGTGCTGTCAGTGCCCCTGGGAGGGAAGGGCATCCCTGAGGCACCCGAATGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 90 bp CCACCGGTTTGTAAATTGGCAACAAGACCTGCCTGCTGGCTGCCCTaGGGCCCACGGGTCTGCTCCCACAGAGGAAGGAGGCAGGAAGCG +
Preference number: 1 (lower is better)
Translates to: PPVCKLATRPACWLP*GPRVCSHRGRRQEA
Trigger: CGCTTCCTGCCTCCTTCCTCTGTGGGAGCAGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAATTTACAAACCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 90 bp GTGGACAGCACCCGACCACAGACACGGTTCTGCCTGCTGCTGGAGTaGGAGGCCTGGTTTCTGAGGCTGCAGCATGGCACTGGCATTGCC +
Preference number: 1 (lower is better)
Translates to: VDSTRPQTRFCLLLE*EAWFLRLQHGTGIA
Trigger: GGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCTGTGGTCGGGTGCTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp ACGAGGAGGATGGAAACAGCATCTGCTCTGGAAGCCGCTCTGGCGTaGGGAGAGTGGGGAGAGGGTGCGCTTGCTGCAGCTGCTGCCTTA +
Preference number: 1 (lower is better)
Translates to: TRRMETASALEAALA*GEWGEGALAAAAAL
Trigger: TAAGGCAGCAGCTGCAGCAAGCGCACCCTCTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATCCTCCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 90 bp AAGACCACCGCAAGAGGGGGTCCCGCCACCAGAGGGGGTCCCGCCTaGCACTGCACGGCTTTCCTCCCTCTATCTACAGGACAAACAAAA +
Preference number: 1 (lower is better)
Translates to: KTTARGGPATRGGPA*HCTAFLPLSTGQTK
Trigger: TTTTGTTTGTCCTGTAGATAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCTGGTGGCGGGACCCCCTCTTGCGGTGGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp CTGCCTGCTGCTGGAGTGAGAGGCCTGGTTTCTGAGGCTGCAGCATaGCACTGGCATTGCCTGTGCTACAGATGGGGACTCCTGCGAGTC +
Preference number: 1 (lower is better)
Translates to: LPAAGVRGLVSEAAA*HWHCLCYRWGLLRV
Trigger: GACTCGCAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 90 bp CACAGACACGGTTCTGCCTGCTGCTGGAGTGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTGGCATTGCCTGTGCTACAGATGGGG +
Preference number: 1 (lower is better)
Translates to: HRHGSACCWSERPGF*GCSMALALPVLQMG
Trigger: CCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 90 bp TCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATaGACAGCAGACCCGGAGGCATGGGCTGGGGCAGCACAACTGGGT +
Preference number: 1 (lower is better)
Translates to: SLDHVLNPGQVSTHS*TADPEAWAGAAQLG
Trigger: ACCCAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp AGATGGAGTTTAAGGCACACAGCGAGCGATGGAGGAGGGAGGTGCTaGCCTCTCCCCTCTGAATTAACTCCCCCAGGAGCTCAGCTCTGG +
Preference number: 1 (lower is better)
Translates to: RWSLRHTASDGGGRC*PLPSELTPPGAQLW
Trigger: CCAGAGCTGAGCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGCTGTGTGCCTTAAACTCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp ACTCTACACACACACTCCTTAAATAATAAAGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGCCACCAGAGGG +
Preference number: 1 (lower is better)
Translates to: TLHTHSLNNKVTGPG*PRKTTARGGPATRG
Trigger: CCCTCTGGTGGCGGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATTATTTAAGGAGTGTGTGTGTAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp GCTGCTGGAGTGAGAGGCCTGGTTTCTGAGGCTGCAGCATGGCACTaGCATTGCCTGTGCTACAGATGGGGACTCCTGCGAGTCTCACAA +
Preference number: 1 (lower is better)
Translates to: AAGVRGLVSEAAAWH*HCLCYRWGLLRVSQ
Trigger: TTGTGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp CCACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTaGACAGCACCCGACCACAGACACGGTTCTGCCTGCTGCTGGAGT +
Preference number: 1 (lower is better)
Translates to: PPLSSSSPRTRQTEL*TAPDHRHGSACCWS
Trigger: ACTCCAGCAGCAGGCAGAACCGTGTCTGTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 90 bp GGAGTGAGAGGCCTGGTTTCTGAGGCTGCAGCATGGCACTGGCATTaGCTGTGCTACAGATGGGGACTCCTGCGAGTCTCACAAATACAG +
Preference number: 1 (lower is better)
Translates to: GVRGLVSEAAAWHWH*LCYRWGLLRVSQIQ
Trigger: CTGTATTTGTGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp TGTGCAGAGCGGCCCTCACACGCGCACAGCAGCATTCAACAGAGCTaGGCAAGGGAAGGGGAGAGAGAGTCAAGGATTGAAATGAAGGGA +
Preference number: 1 (lower is better)
Translates to: CAERPSHAHSSIQQS*AREGERESRIEMKG
Trigger: TCCCTTCATTTCAATCCTTGACTCTCTCTCCCCTTCCCTTGCCCAGCTCTGTTGAATGCTGCTGTGCGCGTGTGAGGGCCGCTCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 90 bp CAAATACAGGGAGAATTTCAGTTCACACAACCCAAGGGCCCTGTGTaGAGAGCGGCCCTCACACGCGCACAGCAGCATTCAACAGAGCTG +
Preference number: 1 (lower is better)
Translates to: QIQGEFQFTQPKGPV*RAALTRAQQHSTEL
Trigger: CAGCTCTGTTGAATGCTGCTGTGCGCGTGTGAGGGCCGCTCTGCACACAGGGCCCTTGGGTTGTGTGAACTGAAATTCTCCCTGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 90 bp AGTTTGGTGAGGTTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTaGATGATCAAGTCCTCCCTTACTCCAGCCTCCTCTTCTCAGCTC +
Preference number: 1 (lower is better)
Translates to: SLVRFRRLPAIKSIS*MIKSSLTPASSSQL
Trigger: GAGCTGAGAAGAGGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAACCTCACCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGCCTGCTGGCTGCCCTaGGGCCCACGGGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAACWLP*GPRVCS
Trigger: GGAGCAGACCCGTGGGCCTCAGGGCAGCCAGCAGGC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGCTCCGGTCTGGGAGCTaGCCTCTGCGCCCCTCGAGC +
Preference number: 2 (lower is better)
Translates to: PDGASTAGQSTSCGAAKALRSGS*PLRPSS
Trigger: GCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAG...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGGCCCCGCTGAGGGCTaGCCAGCCTCATGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAGPAEG*PASWLR
Trigger: TCGGAGCCATGAGGCTGGCCAGCCCTCAGCGGGGCC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCC +
Preference number: 2 (lower is better)
Translates to: GSRSALPAGSCWRPRNQARSSPV*ELPSAP
Trigger: GGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GSRSALPAGSCWRPRNQALWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTCCGGTCTGGGAGCTaGCCTCTGCGCCCCTCGAGC +
Preference number: 2 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVLRSGS*PLRPSS
Trigger: GCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACGGGATGACAGAGACTaGTGCTGCTCTCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAARDDRD*CCSQAG
Trigger: GCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATCCCG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGCTCCCTGGAGGGGAGTaGGTGGAAGGTCAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: PDGASTAGQSTSCGAAKALPGGE*VEGQEG
Trigger: CCCCTCTTGACCTTCCACCCACTCCCCTCCAGGGAG...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGCCTGCTGGCTGCCCTaGGGCCCACGGGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPACWLP*GPRVCS
Trigger: GGAGCAGACCCGTGGGCCTCAGGGCAGCCAGCAGGC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACTGGCCTCTCCCCTCTaGATTAACTCCCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAALASPL*INSPRS
Trigger: GCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGGCCCCGCTGAGGGCTaGCCAGCCTCATGGCTCCGA +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQAGPAEG*PASWLR
Trigger: TCGGAGCCATGAGGCTGGCCAGCCCTCAGCGGGGCC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 2 (lower is better)
Translates to: PESTLHSAHPAACPHSRADLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQADLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCGGGTGCCTCAGGGATaGCCTTCCCTCCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQARVPQG*PSLPGA
Trigger: TGCCCCTGGGAGGGAAGGGCATCCCTGAGGCACCCG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAAGATTCAGGGACCCTaGAGCTTAGGGAGGGGGAGC +
Preference number: 2 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAKIQGP*SLGRGS
Trigger: GCTCCCCCTCCCTAAGCTCCAGGGTCCCTGAATCTT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAAAACAGCATCTGCTCTaGAAGCCGCTCTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAKQHLL*KPLWRG
Trigger: CCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTT...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCTCCGGTCTGGGAGCTaGCCTCTGCGCCCCTCGAGC +
Preference number: 2 (lower is better)
Translates to: EGEHPPLPWSADEVSAALLRSGS*PLRPSS
Trigger: GCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCGGGTGCCTCAGGGATaGCCTTCCCTCCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGRVPQG*PSLPGA
Trigger: TGCCCCTGGGAGGGAAGGGCATCCCTGAGGCACCCG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGTTCCCGCAGCGCCCTaGCTGCAGGCTCATGCTGGA +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQAVPAAP*LQAHAG
Trigger: TCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAAC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGCCAGGCCGCAGCACTaGGCACAGAGCTCAGCAATA +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGARPQH*AQSSAI
Trigger: TATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQAFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGTTCCCGCAGCGCCCTaGCTGCAGGCTCATGCTGGA +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGVPAAP*LQAHAG
Trigger: TCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAAC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCACGGTTCTGCCTGCTaGTGGAGTGAGAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGHGSAC*WSERPG
Trigger: ACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAHPPLP*SADEVS
Trigger: AGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCATCTCAGCTCCCCAGGTaGTGTGGGAGGGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPSQLPR*CGRGPV
Trigger: CACTGGGCCCCTCCCACACCACCTGGGGAGCTGAGA...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTGGCCTCTCCCCTCTaGATTAACTCCCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLASPL*INSPRS
Trigger: GCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQADRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGGCTTCTGCCTCCCTaGACCCTGAGGGACCATTCG +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQARLLPP*TLRDHS
Trigger: CGAATGGTCCCTCAGGGTGCAGGGAGGCAGAAGCCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQARGSGK*KDPPPS
Trigger: ACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCACCCTGCTGTTCACTTaGCCACGTCCTAAACCCGGG +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPTLLFT*PRPKPG
Trigger: CCCGGGTTTAGGACGTGGTCAAGTGAACAGCAGGGT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCGAGGCCGGGACTCCTaGCATGCGCCTAACAGGTCC +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHRGRDS*HAPNRS
Trigger: GGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAGGCTTCTGCCTCCCTaGACCCTGAGGGACCATTCG +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGRLLPP*TLRDHS
Trigger: CGAATGGTCCCTCAGGGTGCAGGGAGGCAGAAGCCT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGATGGAAACAGCATCTaGTCTGGAAGCCGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGDGNSI*SGSRSG
Trigger: GCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTGCCTGTGCTACAGATaGGGACTCCTGCGAGTCTCA +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGCLCYR*GLLRVS
Trigger: TGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTGCTCATGTGCTGCCTaGGCCCTGCTGCTCAGAACA +
Preference number: 2 (lower is better)
Translates to: HGQAAALSTELSNNQGQACSCAA*ALLLRT
Trigger: TGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAACGAGTCCTCCGCCTaGCTCACGTCTGTCTGTGAA +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGNESSA*LTSVCE
Trigger: TTCACAGACAGACGTGAGCCAGGCGGAGGACTCGTT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGRGSGK*KDPPPS
Trigger: ACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCATGCCTCCCTGCACCCTaGGGGACCATTCGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPCLPAP*GTIRVP
Trigger: AGGCACCCGAATGGTCCCTCAGGGTGCAGGGAGGCA...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPGQSTS*GAAKAS
Trigger: TGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGATGACAGAGACTGCTaGTGCTCTCAGGCGGGCAAG +
Preference number: 2 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPDDRDC*CSQAGK
Trigger: CTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCGGGATGACAGAGACTaGTGCTGCTCTCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGRDDRD*CCSQAG
Trigger: GCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATCCCG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGGTCCCGCCTGCCACTaGACGGCTTTCCTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHGPACH*TAFLPL
Trigger: TAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAAACAGCATCTGCTCTaGAAGCCGCTCTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGKQHLL*KPLWRG
Trigger: CCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CAA 90 bp CACAGGGGGCTGCCTGCCATCAATAAGTTAGACATACATCGCACCTaGCCGTCCTCACGCAGGGAGCCCCTGGGCACTGCTCATGTGCTG +
Preference number: 2 (lower is better)
Translates to: HRGLPAINKLDIHRT*PSSRREPLGTAHVL
Trigger: CAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGTCTAACTTATTGATGGCAGGCAGCCCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHERPGF*GCSMAL
Trigger: CAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGATGGAGGAGGGAGGTaGTGGCCTCTCCCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGDGGGR*WPLPSE
Trigger: TTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGAGGGACCATTCGGGTaGCTCAGGGATGCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPEGPFG*LRDALP
Trigger: GGGAAGGGCATCCCTGAGGCACCCGAATGGTCCCTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGGGAGGGACATGAGATaGAGTTTAAGGCACACAGCG +
Preference number: 2 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPGRDMR*SLRHTA
Trigger: CGCTGTGTGCCTTAAACTCCATCTCATGTCCCTCCC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAGGAGCCCTGCTGGCTaGCCCAGGATGGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTRSPAG*PRMGQG
Trigger: TCCTTGCCCCATCCTGGGCCAGCCAGCAGGGCTCCT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCA +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLVTGPG*PRKTTA
Trigger: TGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCAC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CAA 90 bp TCATGCTGGAGGCCACGGAACCAGGCGGCACAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SCWRPRNQAAQGRFC*SSAPQALPRLSSSA
Trigger: TGCTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTGTGCCGCCTGGTTCCGTGGCCTCCAGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGCTTGCTGCAGCTGCTaGCTTAGGAGGCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHACCSC*LRRLLC
Trigger: ACAGAGGAGCCTCCTAAGGCAGCAGCTGCAGCAAGC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCC +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCRSSPV*ELPSAP
Trigger: GGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAAACAGCATCTGCTCTaGAAGCCGCTCTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHKQHLL*KPLWRG
Trigger: CCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCTGCAGGCTCATGCTaGAGGCCACGGAACCAGGCG +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLPAGSC*RPRNQA
Trigger: CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCCCCCGAGTCTACTCTaGATTCTGCCCACCCAGCTG +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTPPSLL*ILPTQL
Trigger: CAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGGGG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLDRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTDRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGTGCTGCCTGGGCCCTaGTGCTCAGAACACCAAGGG +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLVLPGP*CSEHQG
Trigger: CCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCAC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCATTGCCTGGGCACACTaGGGCCAGGCACAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLIAWAH*GQAQGL
Trigger: CAGACCCTGTGCCTGGCCCCAGTGTGCCCAGGCAAT...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCGGGATGACAGAGACTaGTGCTGCTCTCAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCRDDRD*CCSQAG
Trigger: GCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATCCCG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCAGAGGGTGCGCTTGCTaGAGCTGCTGCCTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLRGCAC*SCCLRR
Trigger: CCTCCTAAGGCAGCAGCTGCAGCAAGCGCACCCTCT...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGGGAGGGACATGAGATaGAGTTTAAGGCACACAGCG +
Preference number: 2 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHGRDMR*SLRHTA
Trigger: CGCTGTGTGCCTTAAACTCCATCTCATGTCCCTCCC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 2 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITDLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGATGGAGGAGGGAGGTaGTGGCCTCTCCCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCDGGGR*WPLPSE
Trigger: TTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGATGGAAACAGCATCTaGTCTGGAAGCCGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTDGNSI*SGSRSG
Trigger: GCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCAGACACGGTTCTGCCTaGTGCTGGAGTGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLRHGSA*CWSERP
Trigger: AGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCT...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCA +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITVTGPG*PRKTTA
Trigger: TGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCAC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACATGCCTCCCTGCACCCTaGGGGACCATTCGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITCLPAP*GTIRVP
Trigger: AGGCACCCGAATGGTCCCTCAGGGTGCAGGGAGGCA...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTCACACCATCCTCCATaGATCAGAAGGGGAAGCGGA +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSHHPP*IRRGSG
Trigger: TCCGCTTCCCCTTCTGATGCATGGAGGATGGTGTGA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGCTTGCTGCAGCTGCTaGCTTAGGAGGCTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCACCSC*LRRLLC
Trigger: ACAGAGGAGCCTCCTAAGGCAGCAGCTGCAGCAAGC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCACTGGCATTGCCTGTaGTACAGATGGGGACTCCTG +
Preference number: 2 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLHWHCL*YRWGLL
Trigger: CAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCAGACCCGGAGGCATaGGCTGGGGCAGCACAACTG +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITADPEA*AGAAQL
Trigger: CAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCCTGCTGGCTGCCCTaGGGCCCACGGGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLACWLP*GPRVCS
Trigger: GGAGCAGACCCGTGGGCCTCAGGGCAGCCAGCAGGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCLASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: PAIKSISWMIKSSLTPASGQSTS*GAAKAS
Trigger: TGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAGCACAGTTAGACCCTaGTGTTCACTTGACCACGTC +
Preference number: 2 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSTVRP*CSLDHV
Trigger: GACGTGGTCAAGTGAACAGCAGGGTCTAACTGTGCT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCTCACACCATCCTCCATaGATCAGAAGGGGAAGCGGA +
Preference number: 2 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCSHHPP*IRRGSG
Trigger: TCCGCTTCCCCTTCTGATGCATGGAGGATGGTGTGA...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCCGGAGCGGGAAGATaGTCCCCAGAATCGGGTTCA +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITAGAGR*SPESGS
Trigger: TGAACCCGATTCTGGGGAGCATCTTCCCGCTCCGGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: LHSFEISEDSGTLELREGHPPLP*SADEVS
Trigger: AGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPGQSTS*GAAKAS
Trigger: TGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCGCCCCACAAGCCTTaGCCAGATTGTCAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITAPHKP*PDCQAQ
Trigger: CTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATCTCAGCTCCCCAGGTaGTGTGGGAGGGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPSQLPR*CGRGPV
Trigger: CACTGGGCCCCTCCCACACCACCTGGGGAGCTGAGA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCGAGGCCGGGACTCCTaGCATGCGCCTAACAGGTCC +
Preference number: 2 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLRGRDS*HAPNRS
Trigger: GGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGTGAGCACTCATTCATaGACAGCAGACCCGGAGGCA +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITVSTHS*TADPEA
Trigger: TGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCAC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACACACTGGCATTGCCTGTaGTACAGATGGGGACTCCTG +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITHWHCL*YRWGLL
Trigger: CAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTG...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACACACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: CLQEDATIRQVSWGIYITHPPLP*SADEVS
Trigger: AGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTG...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 72 bp AGACTGCTGCTGCTCTCAGGCGGGCAAGGGAGGCCCTaGTGGCGCCAGTACCGCGGGGCAGAGCACCAGCTG +
Preference number: 3 (lower is better)
Translates to: RLLLLSGGQGRP*WRQYRGAEHQL
Trigger: CAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGGGCCTCCCTTGCCCGCCTGAGAGCAGCAGCAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp CAACTGGGTTCCCGCAGCGCCCTGCCTGCAGGCTCATaGTGGAGGCCACGGAACCAGGCGGCACAGGGCAGA +
Preference number: 3 (lower is better)
Translates to: QLGSRSALPAGS*WRPRNQAAQGR
Trigger: TCTGCCCTGTGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACCCAGTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp CTGGGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTaGAGGCCACGGAACCAGGCGGCACAGGGCAGATTC +
Preference number: 3 (lower is better)
Translates to: LGSRSALPAGSC*RPRNQAAQGRF
Trigger: GAATCTGCCCTGTGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCACCTGCGTACCTTTCC +
Preference number: 3 (lower is better)
Translates to: PDGASTAGQSTS*GAAKASPAYLS
Trigger: GGAAAGGTACGCAGGTGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp CGTCCTCACGCAGGGAGCCCCTGGGCACTGCTCATGTaGTGCCTGGGCCCTGCTGCTCAGAACACCAAGGGC +
Preference number: 3 (lower is better)
Translates to: RPHAGSPWALLM*CLGPAAQNTKG
Trigger: GCCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGCGCCCCACAAGCCTaGCCCAGATTGTCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASAPQA*PRLSSS
Trigger: TGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCC +
Preference number: 3 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAQGRFC*SSAPQA
Trigger: GGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp GCAAGAGGGGGTCCCGCCACCAGAGGGGGTCCCGCCTaGCACTGCACGGCTTTCCTCCCTCTATCTACAGGA +
Preference number: 3 (lower is better)
Translates to: ARGGPATRGGPA*HCTAFLPLSTG
Trigger: TCCTGTAGATAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCTGGTGGCGGGACCCCCTCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp GGGGGTCCCGCCACCAGAGGGGGTCCCGCCTGCCACTaGACGGCTTTCCTCCCTCTATCTACAGGACAAACA +
Preference number: 3 (lower is better)
Translates to: GGPATRGGPACH*TAFLPLSTGQT
Trigger: TGTTTGTCCTGTAGATAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCTGGTGGCGGGACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp GCCATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: AMRLTGPRSSPV*ELPSAPLEHSP
Trigger: AGGAGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp GTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATaGGCTGGGGCAGCACAACTGGGTTCCCGCAGCGCC +
Preference number: 3 (lower is better)
Translates to: VSTHSCTADPEA*AGAAQLGSRSA
Trigger: GGCGCTGCGGGAACCCAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACCACCGGTTTGTAAATaGGCAACAAGACCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAPPVCK*ATRPAC
Trigger: GCAGGCAGGTCTTGTTGCCAATTTACAAACCGGTGG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp CCCACACCCCGACACCTGCAGGTGAGGACTGACCTCTaGAAGGAACGAGTCCTCCGCCTGGCTCACGTCTGT +
Preference number: 3 (lower is better)
Translates to: PTPRHLQVRTDL*KERVLRLAHVC
Trigger: ACAGACGTGAGCCAGGCGGAGGACTCGTTCCTTGCAGAGGTCAGTCCTCACCTGCAGGTGTCGGGGTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGCATGGCACTGGCATaGCCTGTGCTACAGATGGGG +
Preference number: 3 (lower is better)
Translates to: HGQAAALSTELSNNQGQASMALA*PVLQMG
Trigger: CCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCCACCGGTTTGTAAATaGGCAACAAGACCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGPPVCK*ATRPAC
Trigger: GCAGGCAGGTCTTGTTGCCAATTTACAAACCGGTGG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 3 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 3 (lower is better)
Translates to: HGQAAALSTELSNNQGQAQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 72 bp ACCCGACCACAGACACGGTTCTGCCTGCTGCTGGAGTaGGAGGCCTGGTTTCTGAGGCTGCAGCATGGCACT +
Preference number: 3 (lower is better)
Translates to: TRPQTRFCLLLE*EAWFLRLQHGT
Trigger: AGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCTGTGGTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp CTGGAGCTTAGGGAGGGGGAGCACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCTGCTGCTCTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LELREGEHPPLP*SADEVSAALSL
Trigger: CAGGGAGAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTCCCTAAGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 72 bp GGTTCTGCCTGCTGCTGGAGTGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTGGCATTGCCTGTGCTA +
Preference number: 3 (lower is better)
Translates to: GSACCWSERPGF*GCSMALALPVL
Trigger: TAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp GGCCTGGTTTCTGAGGCTGCAGCATGGCACTGGCATTaGCTGTGCTACAGATGGGGACTCCTGCGAGTCTCA +
Preference number: 3 (lower is better)
Translates to: GLVSEAAAWHWH*LCYRWGLLRVS
Trigger: TGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGCCTCAGAAACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp ACACACTCCTTAAATAATAAAGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGCC +
Preference number: 3 (lower is better)
Translates to: THSLNNKVTGPG*PRKTTARGGPA
Trigger: GGCGGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATTATTTAAGGAGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAGCTCTGGCCTCAGTTaGGTGAGGTTCAGAAGACTC +
Preference number: 3 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGSSGLS*VRFRRL
Trigger: GAGTCTTCTGAACCTCACCAAACTGAGGCCAGAGCT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACA +
Preference number: 3 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPAARMV*TRRMET
Trigger: TGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 3 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp GAGAATGGTTTTGACGAGGAGGATGGAAACAGCATCTaGTCTGGAAGCCGCTCTGGCGTGGGGAGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: ENGFDEEDGNSI*SGSRSGVGRVG
Trigger: CCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATCCTCCTCGTCAAAACCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp GGAGAATTTCAGTTCACACAACCCAAGGGCCCTGTGTaGAGAGCGGCCCTCACACGCGCACAGCAGCATTCA +
Preference number: 3 (lower is better)
Translates to: GEFQFTQPKGPV*RAALTRAQQHS
Trigger: TGAATGCTGCTGTGCGCGTGTGAGGGCCGCTCTGCACACAGGGCCCTTGGGTTGTGTGAACTGAAATTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CCA 72 bp GGGCATATATATTACAATGTAACCCTGTGGAGGTCGTaGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGG +
Preference number: 3 (lower is better)
Translates to: GHIYYNVTLWRS*GRSGKMLPRIG
Trigger: CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATATATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACA +
Preference number: 3 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGAARMV*TRRMET
Trigger: TGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCCACCGGTTTGTAAATaGGCAACAAGACCTGCCTGC +
Preference number: 3 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTPPVCK*ATRPAC
Trigger: GCAGGCAGGTCTTGTTGCCAATTTACAAACCGGTGG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAGCGCCCCACAAGCCTaGCCCAGATTGTCAAGCTCA +
Preference number: 3 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCSAPQA*PRLSSS
Trigger: TGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR TCA 72 bp CACCATCCTCCATGCATCAGAAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGTCTACTCTGCATTCTG +
Preference number: 3 (lower is better)
Translates to: HHPPCIRRGSGK*KDPPPSLLCIL
Trigger: CAGAATGCAGAGTAGACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCTTCTGATGCATGGAGGATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR GCA 72 bp AGGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTaGCCAGATTGTCAAGCTCAGCAGCGAGAATGGTTT +
Preference number: 3 (lower is better)
Translates to: RADSVCQAPHKP*PDCQAQQREWF
Trigger: AAACCATTCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR-3UTR CAA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAGCTCTGGCCTCAGTTaGGTGAGGTTCAGAAGACTC +
Preference number: 3 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSSGLS*VRFRRL
Trigger: GAGTCTTCTGAACCTCACCAAACTGAGGCCAGAGCT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCGGGCTGCCAGGGGCTaGCTGGAGGTGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQARAARG*LEVAHL
Trigger: CAGGTGTGCCACCTCCAGCCAGCCCCTGGCAGCCCG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTCCCAGGGACGCCGCTaGCCGCTGAGGGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKASQGRR*PLRDLW
Trigger: CCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGCCCCAGGTACGGGATaGACGGCGGTTCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAAPGTG*TAVPPP
Trigger: CGGAGGTGGAACCGCCGTGCATCCCGTACCTGGGGC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKADLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGGCCAGAGGTCCGTCTaGCTGGGGATGGCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAGQRSV*LGMAAK
Trigger: CTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGACTCCAGCCTGCGGATaGGCGCCGAGTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQATPACG*APSPGQ
Trigger: CTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAVTGPG*PRKTTA
Trigger: TGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCAC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAADAADR*GISGMS
Trigger: GGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGGCGTATCTGTCTGCTaGCCTGGGGCCAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAGVSVC*PGARGP
Trigger: CGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACGAGGCCGGGACTCCTaGCATGCGCCTAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAARGRDS*HAPNRS
Trigger: GGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGTTCCCGCAGCGCCCTaGCTGCAGGCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAVPAAP*LQAHAG
Trigger: TCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAAC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGAGGGCCTGGGGAATTaGCTGGGCACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAEGLGN*LGTLGP
Trigger: TGGCCCCAGTGTGCCCAGGCAATTCCCCAGGCCCTC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCGCGTAGGGGACGGATaGGATCGGGGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQARVGDG*DRGCAL
Trigger: CAGAGCACAGCCCCGATCCCATCCGTCCCCTACGCG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGCGCGTAGGGGACGGATaGGATCGGGGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKARVGDG*DRGCAL
Trigger: CAGAGCACAGCCCCGATCCCATCCGTCCCCTACGCG...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTGGCGGGGCCAGCTCCTaGACGGAGTCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSGGASS*TESTPL
Trigger: CAGTGGGGTGGACTCCGTGCAGGAGCTGGCCCCGCC...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGGTCCCGCCTGCCACTaGACGGCTTTCCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAGPACH*TAFLPL
Trigger: TAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGGTCCCGCCTGCCACTaGACGGCTTTCCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAGPACH*TAFLPL
Trigger: TAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGTGCTGCCTGGGCCCTaGTGCTCAGAACACCAAGGG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAVLPGP*CSEHQG
Trigger: CCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCAC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACTGCTCATGTGCTaGCTGGGCCCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAALLMC*LGPAAQ
Trigger: CTGAGCAGCAGGGCCCAGGCAGCACATGAGCAGTGC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGAGCCGTCCGCCGTCTaGGAGGCTGCGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAEPSAV*EAALLR
Trigger: GCGCAGGAGCGCAGCCTCCCAGACGGCGGACGGCTC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGTCTTTCCCAGCCGGTaGCTCCAGCTGCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAVFPSR*LQLPLL
Trigger: AAGCAGCGGCAGCTGGAGCCACCGGCTGGGAAAGAC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGGCCCCGCTGAGGGCTaGCCAGCCTCATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVGPAEG*PASWLR
Trigger: TCGGAGCCATGAGGCTGGCCAGCCCTCAGCGGGGCC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTCCCAGGGACGCCGCTaGCCGCTGAGGGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVSQGRR*PLRDLW
Trigger: CCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAERPGF*GCSMAL
Trigger: CAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGGAGACGGACGTCCCTaGTTCTCGATGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAGDGRP*FSMVSL
Trigger: CAGGCTCACCATCGAGAAGCAGGGACGTCCGTCTCC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACCGTCATCACCCTCCTaGTTGAGCGTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAPSSPS*LSVSLD
Trigger: GTCCAGGCTGACGCTCAAGCAGGAGGGTGATGACGG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGCCCCAGGTACGGGATaGACGGCGGTTCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAAPGTG*TAVPPP
Trigger: CGGAGGTGGAACCGCCGTGCATCCCGTACCTGGGGC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCTCCGGTCTGGGAGCTaGCCTCTGCGCCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQALRSGS*PLRPSS
Trigger: GCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVDLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCGGGTGCCTCAGGGATaGCCTTCCCTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCARVPQG*PSLPGA
Trigger: TGCCCCTGGGAGGGAAGGGCATCCCTGAGGCACCCG...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGGCTTCTGCCTCCCTaGACCCTGAGGGACCATTCG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQARLLPP*TLRDHS
Trigger: CGAATGGTCCCTCAGGGTGCAGGGAGGCAGAAGCCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCCGTCTGGCTGGGGATaGCCGCCAAGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGPSGWG*PPRGSW
Trigger: CCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCGGGCTGCCAGGGGCTaGCTGGAGGTGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQARAARG*LEVAHL
Trigger: CAGGTGTGCCACCTCCAGCCAGCCCCTGGCAGCCCG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGRSSPV*ELPSAP
Trigger: GGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTGCCTCCCTGCACCCTaGGGGACCATTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVCLPAP*GTIRVP
Trigger: AGGCACCCGAATGGTCCCTCAGGGTGCAGGGAGGCA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTGCCTCCCTGCACCCTaGGGGACCATTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGCLPAP*GTIRVP
Trigger: AGGCACCCGAATGGTCCCTCAGGGTGCAGGGAGGCA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTGCCTCCCTGCACCCTaGGGGACCATTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSCLPAP*GTIRVP
Trigger: AGGCACCCGAATGGTCCCTCAGGGTGCAGGGAGGCA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTGGGAGGCTGCGCTCCTaGGCTTCTTCTCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSGRLRS*ASSRGE
Trigger: CTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCCTCCC...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCGCCGTCTGGGAGGCTaGGCTCCTGCGCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVRRLGG*APALLL
Trigger: GAGAAGAAGCGCAGGAGCGCAGCCTCCCAGACGGCG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGAGGCCCTCTGAAGTCTaGTTCTGCCACTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKARPSEV*FCHSSL
Trigger: CAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCT...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGCTGTCGATCAGTGTaGAGTACTCGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASCRSV*STRPGP
Trigger: AGGGCCTGGCCGAGTACTGCACACTGATCGACAGCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCACTCCGGTCTGGGAGCTaGCCTCTGCGCCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPLRSGS*PLRPSS
Trigger: GCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAG...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCGCCCCACAAGCCTTaGCCAGATTGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAAPHKP*PDCQAQ
Trigger: CTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCCCAAGGGCCCTGTGTaGAGAGCGGCCCTCACACGC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAPKGPV*RAALTR
Trigger: GCGTGTGAGGGCCGCTCTGCACACAGGGCCCTTGGG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGAGACACGGTTCTGCCTaGTGCTGGAGTGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKARHGSA*CWSERP
Trigger: AGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCT...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGAGGGCCTGGGGAATTaGCTGGGCACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVEGLGN*LGTLGP
Trigger: TGGCCCCAGTGTGCCCAGGCAATTCCCCAGGCCCTC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGTGAGGACTGACCTCTaGAAGGAACGAGTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAVRTDL*KERVLR
Trigger: GCGGAGGACTCGTTCCTTGCAGAGGTCAGTCCTCAC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCAGGGGGAGCTCTGCTaGGCCATCAGGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSQGELC*AIRLAG
Trigger: GCCAGCAAGCCTGATGGCCCAGCAGAGCTCCCCCTG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTGGTGGCTCGGCTCATaGGGGCCACCACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVWWLGS*GPPQPL
Trigger: GAGTGGCTGTGGTGGCCCCCATGAGCCGAGCCACCA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCCGTCTGGCTGGGGATaGCCGCCAAGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAPSGWG*PPRGSW
Trigger: CCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCCGTCTGGCTGGGGATaGCCGCCAAGAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPPSGWG*PPRGSW
Trigger: CCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCAGAGGTCCGTCTGGCTaGGGATGGCCGCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVRGPSG*GWPPRG
Trigger: GCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCAGGAGCCCTGCTGGCTaGCCCAGGATGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCARSPAG*PRMGQG
Trigger: TCCTTGCCCCATCCTGGGCCAGCCAGCAGGGCTCCT...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGLWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAVTGPG*PRKTTA
Trigger: TGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCAC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTGCTCATGTGCTGCCTaGGCCCTGCTGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKACSCAA*ALLLRT
Trigger: TGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCATACAATGTAACCCTGTaGAGGTCGTGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAYNVTL*RSWGRS
Trigger: GCTCCGGCCCCACGACCTCCACAGGGTTACATTGTA...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGGACAGCTGCTCGTCTaGCTTGCTGAGCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAGQLLV*LAELAY
Trigger: ATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTGGAGGTGGCACACCTaGGTAGCTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAWRWHT*VASSGP
Trigger: TGGACCAGAAGAAGCTACTCAGGTGTGCCACCTCCA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCTCGGCCAGGCCCTCTaGAGTCTGCTTCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSLGQAL*SLLLPL
Trigger: GAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTATCAACCACCCGAATaGCAGGCAGAGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAYQPPE*QAEEAW
Trigger: CCAAGCCTCCTCTGCCTGGCATTCGGGTGGTTGATA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCATCCAGAGAGGACAGCTaGTCGTCTGACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAASREDS*SSDLLS
Trigger: GCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGA...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTCCAGAGAGGACAGCTaGTCGTCTGACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASREDS*SSDLLS
Trigger: GCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTATGGGATCGGGGCTGTaGTCTGCAGGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSMGSGL*SAGPPQ
Trigger: CTGGGGAGGACCTGCAGAGCACAGCCCCGATCCCAT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCATGGGATCGGGGCTGTaGTCTGCAGGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAMGSGL*SAGPPQ
Trigger: CTGGGGAGGACCTGCAGAGCACAGCCCCGATCCCAT...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTCCAGCAGCGTTAGCTaGTCCGCTATCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKASSSVS*SAISWL
Trigger: CAGCCATGAGATAGCGGAGCAGCTAACGCTGCTGGA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTCTGAAGTCTGCTTCTaGCACTCCAGCCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKASEVCF*HSSLRM
Trigger: CATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGACCTGCCTGCTGGCTaGCCTGAGGCCCACGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPDLPAG*PEAHGS
Trigger: AGACCCGTGGGCCTCAGGGCAGCCAGCAGGCAGGTC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAGQSTS*GAAKAS
Trigger: TGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTGAGGGACCATTCGGGTaGCTCAGGGATGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSEGPFG*LRDALP
Trigger: GGGAAGGGCATCCCTGAGGCACCCGAATGGTCCCTC...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGTTCCCGCAGCGCCCTaGCTGCAGGCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPVPAAP*LQAHAG
Trigger: TCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAAC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCAGAGGGGGTCCCGCCTaGCACTGCACGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPRGGPA*HCTAFL
Trigger: GAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACACTGGCATTGCCTGTaGTACAGATGGGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAHWHCL*YRWGLL
Trigger: CAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGCACTGCTCATGTGCTaGCTGGGCCCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGALLMC*LGPAAQ
Trigger: CTGAGCAGCAGGGCCCAGGCAGCACATGAGCAGTGC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTGGGCACTGCTCATGTaGTGCCTGGGCCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGWALLM*CLGPAA
Trigger: AGCAGCAGGGCCCAGGCAGCACATGAGCAGTGCCCA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTGTCAGACATGGTGTGTaGCTGCCCCTCCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSVRHGV*LPLLAP
Trigger: GGGGGCAAGGAGGGGCAGGCACACACCATGTCTGAC...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGTCAGACATGGTGTGTaGCTGCCCCTCCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGVRHGV*LPLLAP
Trigger: GGGGGCAAGGAGGGGCAGGCACACACCATGTCTGAC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCAGGCAGAGGAGGCTTaGGGGGCGCGACCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVQAEEA*GARPLH
Trigger: ATGAAGAGGTCGCGCCCCCCAAGCCTCCTCTGCCTG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCTGGTGGCTCGGCTCATaGGGGCCACCACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPWWLGS*GPPQPL
Trigger: GAGTGGCTGTGGTGGCCCCCATGAGCCGAGCCACCA...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAACTGGAGCCACTGGTaGCTCGGCTCATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGNWSHW*LGSWGP
Trigger: TGGCCCCCATGAGCCGAGCCACCAGTGGCTCCAGTT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTCTCCACCATATGAGTaGCTGCCTCCTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASPPYE*LPPDSR
Trigger: GCGACTGTCAGGAGGCAGCCACTCATATGGTGGAGA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGAGGTCCGTCTGGCTaGGGATGGCCGCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQARGPSG*GWPPRG
Trigger: GCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGAGCCGTCCGCCGTCTaGGAGGCTGCGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHEPSAV*EAALLR
Trigger: GCGCAGGAGCGCAGCCTCCCAGACGGCGGACGGCTC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGGCCCCGCTGAGGGCTaGCCAGCCTCATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALGPAEG*PASWLR
Trigger: TCGGAGCCATGAGGCTGGCCAGCCCTCAGCGGGGCC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCTCCCTGGAGGGGAGTaGGTGGAAGGTCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSLPGGE*VEGQEG
Trigger: CCCCTCTTGACCTTCCACCCACTCCCCTCCAGGGAG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTCTCAGCTCCCCAGGTaGTGTGGGAGGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQASQLPR*CGRGPV
Trigger: CACTGGGCCCCTCCCACACCACCTGGGGAGCTGAGA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAAACGAGTCCTCCGCCTaGCTCACGTCTGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAANESSA*LTSVCE
Trigger: TTCACAGACAGACGTGAGCCAGGCGGAGGACTCGTT...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGCTGGCCTCTCCCCTCTaGATTAACTCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGLASPL*INSPRS
Trigger: GCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAG...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGCCAGGCCGCAGCACTaGGCACAGAGCTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAARPQH*AQSSAI
Trigger: TATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTGGCCTCCAGCACCTTaGTGGCTGACCCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSWPPAP*WLTLEA
Trigger: TGCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCTGGCCTCCAGCACCTTaGTGGCTGACCCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAWPPAP*WLTLEA
Trigger: TGCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCA...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAATTCGAGGATCGTTCTaGACCAGGGGTAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAIRGSF*TRGKMA
Trigger: GGCCATCTTACCCCTGGTGCAGAACGATCCTCGAAT...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGGCGTATCTGTCTGCTaGCCTGGGGCCAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGGVSVC*PGARGP
Trigger: CGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTCTCACTGCCGTCTCTaGTGTCCTTCCCAGGGACGC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGSHCRL*CPSQGR
Trigger: GCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAGA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTCTCACTGCCGTCTCTaGTGTCCTTCCCAGGGACGC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSHCRL*CPSQGR
Trigger: GCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAGA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGGCTCAGCTCCCCATTaGACACCAGGCGGAAGACCA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVGSAPH*TPGGRP
Trigger: TGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTCACACCATCCTCCATaGATCAGAAGGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASHHPP*IRRGSG
Trigger: TCCGCTTCCCCTTCTGATGCATGGAGGATGGTGTGA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGATGGAGGAGGGAGGTaGTGGCCTCTCCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCADGGGR*WPLPSE
Trigger: TTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCACGGTTCTGCCTGCTaGTGGAGTGAGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVHGSAC*WSERPG
Trigger: ACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCACGGTTCTGCCTGCTaGTGGAGTGAGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAHGSAC*WSERPG
Trigger: ACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTG...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGTGCTGCCTGGGCCCTaGTGCTCAGAACACCAAGGG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPVLPGP*CSEHQG
Trigger: CCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCAC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCTGGGCACTGCTCATGTaGTGCCTGGGCCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPWALLM*CLGPAA
Trigger: AGCAGCAGGGCCCAGGCAGCACATGAGCAGTGCCCA...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGTCAGACATGGTGTGTaGCTGCCCCTCCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPVRHGV*LPLLAP
Trigger: GGGGGCAAGGAGGGGCAGGCACACACCATGTCTGAC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGCCGGAGCGGGAAGATaGTCCCCAGAATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVAGAGR*SPESGS
Trigger: TGAACCCGATTCTGGGGAGCATCTTCCCGCTCCGGC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGCACCAGGGGTAAGATaGCCTCCAGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAAPGVR*PPAPCW
Trigger: CCAGCAAGGTGCTGGAGGCCATCTTACCCCTGGTGC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTGCTGGCAGGGGAACTaGGCTTCACGGGGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLCWQGN*ASRGSS
Trigger: CGACGAGCCCCGTGAAGCCCAGTTCCCCTGCCAGCA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCAGGGGGAGCTCTGCTaGGCCATCAGGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLQGELC*AIRLAG
Trigger: GCCAGCAAGCCTGATGGCCCAGCAGAGCTCCCCCTG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCAGGCAGAGGAGGCTTaGGGGGCGCGACCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAQAEEA*GARPLH
Trigger: ATGAAGAGGTCGCGCCCCCCAAGCCTCCTCTGCCTG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCAACTGGAGCCACTGGTaGCTCGGCTCATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPNWSHW*LGSWGP
Trigger: TGGCCCCCATGAGCCGAGCCACCAGTGGCTCCAGTT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCTCGGGGAGAGCAGGTaGCGTATCTGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRALGESR*RICLLP
Trigger: GGGCAGCAGACAGATACGCCACCTGCTCTCCCCGAG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCGGGCTGCCAGGGGCTaGCTGGAGGTGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHRAARG*LEVAHL
Trigger: CAGGTGTGCCACCTCCAGCCAGCCCCTGGCAGCCCG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGGCCTCCTCAGCCAGGTaGTCACTGAAGTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAASSAR*SLKSLK
Trigger: CTTCAATGACTTCAGTGACCACCTGGCTGAGGAGGC...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTCTCAGCTCCCCAGGTaGTGTGGGAGGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLSQLPR*CGRGPV
Trigger: CACTGGGCCCCTCCCACACCACCTGGGGAGCTGAGA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCACCTGCAGGCTCATGCTaGAGGCCACGGAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPPAGSC*RPRNQA
Trigger: CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGG...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGCAGACCCGGAGGCATaGGCTGGGGCAGCACAACTG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLADPEA*AGAAQL
Trigger: CAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGTGACAGGTCCCGGCTaGCCCCGCAAGACCACCGCA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALVTGPG*PRKTTA
Trigger: TGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCAC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCACGCAGGGAGCCCCTaGGCACTGCTCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLHAGSP*ALLMCC
Trigger: GCAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGGTCAGACCAGCGAATaGGGTTGGCGAGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGGQTSE*GWRGFG
Trigger: ACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGGTCAGACCAGCGAATaGGGTTGGCGAGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAGQTSE*GWRGFG
Trigger: ACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACATCTCCTTGTCTTCTaGGTTCACGCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAHLLVF*VHAFQH
Trigger: ATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTCCAGAGCATCTGGTaGCTTTGGGGCCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVLQSIW*LWGPLT
Trigger: AGTGAGAGGGCCCCAAAGTCACCAGATGCTCTGGAG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCACTTCCTCCTCCGACTaGGCCGACTCCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVTSSSD*ADSRAS
Trigger: AGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAAGT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGACTTCCTCCTCCGACTaGGCCGACTCCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGTSSSD*ADSRAS
Trigger: AGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAAGT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGCCTGCTGGCTGCCCTaGGGCCCACGGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLACWLP*GPRVCS
Trigger: GGAGCAGACCCGTGGGCCTCAGGGCAGCCAGCAGGC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGRGSGK*KDPPPS
Trigger: ACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTACCCTGCTGTTCACTTaGCCACGTCCTAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSTLLFT*PRPKPG
Trigger: CCCGGGTTTAGGACGTGGTCAAGTGAACAGCAGGGT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGCCAGGCCGCAGCACTaGGCACAGAGCTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAARPQH*AQSSAI
Trigger: TATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTCTGTCTGTGAAGACTaGTTCCCACAACCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSVCED*FPQPAR
Trigger: CCGGGCGGGTTGTGGGAATCAGTCTTCACAGACAGA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCCTGCAGGTGAGGACTaGCCTCTGCAAGGAACGAGT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVPAGED*PLQGTS
Trigger: ACTCGTTCCTTGCAGAGGTCAGTCCTCACCTGCAGG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGGCGGGGCCAGCTCCTaGACGGAGTCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPGGASS*TESTPL
Trigger: CAGTGGGGTGGACTCCGTGCAGGAGCTGGCCCCGCC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCCGTCATCACCCTCCTaGTTGAGCGTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAPSSPS*LSVSLD
Trigger: GTCCAGGCTGACGCTCAAGCAGGAGGGTGATGACGG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGTAGGTGGTCAGGAATaGCTCGCAGTACAACACCAA +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAVGGQE*LAVQHQ
Trigger: TTGGTGTTGTACTGCGAGGCATTCCTGACCACCTAC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGATGACAGAGACTGCTaGTGCTCTCAGGCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVDDRDC*CSQAGK
Trigger: CTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGAGGGTGCGCTTGCTaGAGCTGCTGCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQARGCAC*SCCLRR
Trigger: CCTCCTAAGGCAGCAGCTGCAGCAAGCGCACCCTCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCAGAGGGTGCGCTTGCTaGAGCTGCTGCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPRGCAC*SCCLRR
Trigger: CCTCCTAAGGCAGCAGCTGCAGCAAGCGCACCCTCT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGCGCCCCACAAGCCTTaGCCAGATTGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGAPHKP*PDCQAQ
Trigger: CTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCCCAAGGGCCCTGTGTaGAGAGCGGCCCTCACACGC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGPKGPV*RAALTR
Trigger: GCGTGTGAGGGCCGCTCTGCACACAGGGCCCTTGGG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGCACTGCTCATGTGCTaGCTGGGCCCTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGALLMC*LGPAAQ
Trigger: CTGAGCAGCAGGGCCCAGGCAGCACATGAGCAGTGC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGAGAGTCTGTGTCCATaGCAGCACGGTCGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAESLCP*QHGRSV
Trigger: GACCGAGCGACCGTGCTGCCATGGACACAGACTCTC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372189.7
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGCACCAGGGGTAAGATaGCCTCCAGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPAPGVR*PPAPCW
Trigger: CCAGCAAGGTGCTGGAGGCCATCTTACCCCTGGTGC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCAGGGGGAGCTCTGCTaGGCCATCAGGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALQGELC*AIRLAG
Trigger: GCCAGCAAGCCTGATGGCCCAGCAGAGCTCCCCCTG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTTCCAACAGGCAAACTaGAGCCACTGGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGFQQAN*SHWWLG
Trigger: GCCGAGCCACCAGTGGCTCCAGTTTGCCTGTTGGAA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTTCCAACAGGCAAACTaGAGCCACTGGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVFQQAN*SHWWLG
Trigger: GCCGAGCCACCAGTGGCTCCAGTTTGCCTGTTGGAA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGGCCAGAGGTCCGTCTaGCTGGGGATGGCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGGQRSV*LGMAAK
Trigger: CTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAATCTGTCTGCTGCCCTaGGGCCAGAGGTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPICLLP*GQRSVW
Trigger: CCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGAT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCGCGTAGGGGACGGATaGGATCGGGGCTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALRVGDG*DRGCAL
Trigger: CAGAGCACAGCCCCGATCCCATCCGTCCCCTACGCG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGTCTTTCCCAGCCGGTaGCTCCAGCTGCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLVFPSR*LQLPLL
Trigger: AAGCAGCGGCAGCTGGAGCCACCGGCTGGGAAAGAC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGCTTGATGAGCTCCTCTaGGGAGATGAAGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQALDELL*GDEGPV
Trigger: TACAGGACCTTCATCTCCCCAGAGGAGCTCATCAAG...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACACTCCAGCCTGCGGATaGGCGCCGAGTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHTPACG*APSPGQ
Trigger: CTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTCCCTGGAGGGGAGTaGGTGGAAGGTCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLPGGE*VEGQEG
Trigger: CCCCTCTTGACCTTCCACCCACTCCCCTCCAGGGAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTAAACAGCATCTGCTCTaGAAGCCGCTCTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSKQHLL*KPLWRG
Trigger: CCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGCAGACCCGGAGGCATaGGCTGGGGCAGCACAACTG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALADPEA*AGAAQL
Trigger: CAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGGTTCTGCCTGCTGCTaGAGTGAGAGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAGSACC*SERPGF
Trigger: GAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGGTTCTGCCTGCTGCTaGAGTGAGAGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGGSACC*SERPGF
Trigger: GAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCTGCTCATGTGCTGCCTaGGCCCTGCTGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCACSCAA*ALLLRT
Trigger: TGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCA...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGGTTCAGGTCAGACATaGTGTGTGCCTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVGSGQT*CVPAPP
Trigger: AGGAGGGGCAGGCACACACCATGTCTGACCTGAACC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTACAATGTAACCCTGTaGAGGTCGTGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVYNVTL*RSWGRS
Trigger: GCTCCGGCCCCACGACCTCCACAGGGTTACATTGTA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAGGGCTGAGCTGTGCTaGATTCGAGGATCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGRAELC*IRGSFC
Trigger: GCAGAACGATCCTCGAATTCAGCACAGCTCAGCCCT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCTTCCAGGCCGTCTGCTaGGGTATCTGGTCTGCGTTA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAFQAVC*GIWSAL
Trigger: TAACGCAGACCAGATACCTCAGCAGACGGCCTGGAA...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCTCCAGAGCATCTGGTaGCTTTGGGGCCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRALQSIW*LWGPLT
Trigger: AGTGAGAGGGCCCCAAAGTCACCAGATGCTCTGGAG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGCTCCTCTGGGGAGATaGAGGTCCTGTAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPAPLGR*RSCRWS
Trigger: TGACCACCTACAGGACCTTCATCTCCCCAGAGGAGC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGCTATCTCATGGCTGTaGAAGTCGTGCAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAAISWL*KSCKVP
Trigger: GGGGACCTTGCACGACTTTCACAGCCATGAGATAGC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTCTGGGTTTCCCAGGTaGACGAAGGTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQASGFPR*TKVRSC
Trigger: GCAGGACCTGACCTTCGTTCACCTGGGAAACCCAGA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTGCTGTCGAGGATGTTaGACTGCTGCCACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQACCRGC*TAATAW
Trigger: CCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRARGSGK*KDPPPS
Trigger: ACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCT...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCALASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTACCCTGCTGTTCACTTaGCCACGTCCTAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQATLLFT*PRPKPG
Trigger: CCCGGGTTTAGGACGTGGTCAAGTGAACAGCAGGGT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCCTGCAGGTGAGGACTaGCCTCTGCAAGGAACGAGT +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAPAGED*PLQGTS
Trigger: ACTCGTTCCTTGCAGAGGTCAGTCCTCACCTGCAGG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGGAGACGGACGTCCCTaGTTCTCGATGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPGDGRP*FSMVSL
Trigger: CAGGCTCACCATCGAGAAGCAGGGACGTCCGTCTCC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTATCAACCACCCGAATaGCAGGCAGAGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSYQPPE*QAEEAW
Trigger: CCAAGCCTCCTCTGCCTGGCATTCGGGTGGTTGATA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCGCCGTCTGGGAGGCTaGGCTCCTGCGCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGRRLGG*APALLL
Trigger: GAGAAGAAGCGCAGGAGCGCAGCCTCCCAGACGGCG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCTCCAGCAGCGTTAGCTaGTCCGCTATCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCASSSVS*SAISWL
Trigger: CAGCCATGAGATAGCGGAGCAGCTAACGCTGCTGGA...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTCCAGCAGCGTTAGCTaGTCCGCTATCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGSSSVS*SAISWL
Trigger: CAGCCATGAGATAGCGGAGCAGCTAACGCTGCTGGA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCAGGCCCTCTGAAGTCTaGTTCTGCCACTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPRPSEV*FCHSSL
Trigger: CAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAGCTGTCGATCAGTGTaGAGTACTCGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQASCRSV*STRPGP
Trigger: AGGGCCTGGCCGAGTACTGCACACTGATCGACAGCT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCCCCCGAGTCTACTCTaGATTCTGCCCACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLPPSLL*ILPTQL
Trigger: CAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGGGG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAAGGCTTCTGCCTCCCTaGACCCTGAGGGACCATTCG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPRLLPP*TLRDHS
Trigger: CGAATGGTCCCTCAGGGTGCAGGGAGGCAGAAGCCT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGCGCCCCACAAGCCTTaGCCAGATTGTCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAAPHKP*PDCQAQ
Trigger: CTGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGTGAGCACTCATTCATaGACAGCAGACCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVVSTHS*TADPEA
Trigger: TGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCAC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCACTGGCATTGCCTGTaGTACAGATGGGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSHWHCL*YRWGLL
Trigger: CAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGCATGGCACTGGCATTaGCTGTGCTACAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVAWHWH*LCYRWG
Trigger: TCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTGCTTTCTCGATCTTaGCGGACATTTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVLLSRS*RTFPGC
Trigger: GCAGCCCGGAAATGTCCGGCAAGATCGAGAAAGCAG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGTTCACAGGCTTCTCTaGAATCTTTACGGACACCTC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAVHRLL*NLYGHL
Trigger: GAGGTGTCCGTAAAGATTCCAGAGAAGCCTGTGAAC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGCTGGCAGGGGAACTaGGCTTCACGGGGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGCWQGN*ASRGSS
Trigger: CGACGAGCCCCGTGAAGCCCAGTTCCCCTGCCAGCA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGGCCATCAGGCTTGCTaGCAGGGGAACTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGGHQAC*QGNWAS
Trigger: TGAAGCCCAGTTCCCCTGCCAGCAAGCCTGATGGCC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGCAAACTGGAGCCACTaGTGGCTCGGCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALANWSH*WLGSWG
Trigger: CCCCCATGAGCCGAGCCACCAGTGGCTCCAGTTTGC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCTCGGGGAGAGCAGGTaGCGTATCTGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALLGESR*RICLLP
Trigger: GGGCAGCAGACAGATACGCCACCTGCTCTCCCCGAG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGAGCCGTCCGCCGTCTaGGAGGCTGCGCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLEPSAV*EAALLR
Trigger: GCGCAGGAGCGCAGCCTCCCAGACGGCGGACGGCTC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHLWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCCTGCAGGCTCATGCTaGAGGCCACGGAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHPAGSC*RPRNQA
Trigger: CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCACGCAGGGAGCCCCTaGGCACTGCTCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGHAGSP*ALLMCC
Trigger: GCAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCTCCAGAGCATCTGGTaGCTTTGGGGCCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLLQSIW*LWGPLT
Trigger: AGTGAGAGGGCCCCAAAGTCACCAGATGCTCTGGAG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGCTCCTCTGGGGAGATaGAGGTCCTGTAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLAPLGR*RSCRWS
Trigger: TGACCACCTACAGGACCTTCATCTCCCCAGAGGAGC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCTCGGCCAGGCCCTCTaGAGTCTGCTTCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHLGQAL*SLLLPL
Trigger: GAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCATCTGGGTTTCCCAGGTaGACGAAGGTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPSGFPR*TKVRSC
Trigger: GCAGGACCTGACCTTCGTTCACCTGGGAAACCCAGA...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTATTCGAGGATCGTTCTaGACCAGGGGTAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSIRGSF*TRGKMA
Trigger: GGCCATCTTACCCCTGGTGCAGAACGATCCTCGAAT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCATTTCTTGGGTGGCAATaGTGGTGGAGGACTATTATC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAFLGWQ*WWRTII
Trigger: GATAATAGTCCTCCACCAGCATTGCCACCCAAGAAA...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACATGGGATCGGGGCTGTaGTCTGCAGGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHMGSGL*SAGPPQ
Trigger: CTGGGGAGGACCTGCAGAGCACAGCCCCGATCCCAT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCTCTGAAGTCTGCTTCTaGCACTCCAGCCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPSEVCF*HSSLRM
Trigger: CATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGA...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAAGGCCCTCTGAAGTCTaGTTCTGCCACTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPRPSEV*FCHSSL
Trigger: CAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTCGAGGATGTTGAACTaGTGCCACCGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGSRMLN*CHRLEK
Trigger: CTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTCACACCATCCTCCATaGATCAGAAGGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSHHPP*IRRGSG
Trigger: TCCGCTTCCCCTTCTGATGCATGGAGGATGGTGTGA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGATGACAGAGACTGCTaGTGCTCTCAGGCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLDDRDC*CSQAGK
Trigger: CTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGCTTGCTGCAGCTGCTaGCTTAGGAGGCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLACCSC*LRRLLC
Trigger: ACAGAGGAGCCTCCTAAGGCAGCAGCTGCAGCAAGC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGCTTGCTGCAGCTGCTaGCTTAGGAGGCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGACCSC*LRRLLC
Trigger: ACAGAGGAGCCTCCTAAGGCAGCAGCTGCAGCAAGC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGTGAGCACTCATTCATaGACAGCAGACCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAVSTHS*TADPEA
Trigger: TGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCAC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCACTGGCATTGCCTGTaGTACAGATGGGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAHWHCL*YRWGLL
Trigger: CAGGAGTCCCCATCTGTAGCACAGGCAATGCCAGTG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGACATACATCGCACCTTaGCGTCCTCACGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGTYIAP*RPHAGS
Trigger: GCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCGGACATTTCCGGGCTaGGCCGGAGGCCGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGRTFPG*AGGRGR
Trigger: GCGGCCTCGGCCTCCGGCGCAGCCCGGAAATGTCCG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372195.5
CDS-3UTR CCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCAGGCAGAGGAGGCTTaGGGGGCGCGACCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGQAEEA*GARPLH
Trigger: ATGAAGAGGTCGCGCCCCCCAAGCCTCCTCTGCCTG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCTCTCCACCATATGAGTaGCTGCCTCCTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRASPPYE*LPPDSR
Trigger: GCGACTGTCAGGAGGCAGCCACTCATATGGTGGAGA...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGGCCAGAGGTCCGTCTaGCTGGGGATGGCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLGQRSV*LGMAAK
Trigger: CTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACATCTGTCTGCTGCCCTaGGGCCAGAGGTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHICLLP*GQRSVW
Trigger: CCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGAT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCCGCTGAGGGATCTCTaGGATGTCCGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGPLRDL*DVRLSQ
Trigger: CTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGACATAATTTCGTTGTaGTCAATGAGGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSRSALPAGSCWRPRNQADIISL*SMRDSS
Trigger: CGAGCTGTCCCTCATTGACCACAACGAAATTATGTC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLRSSPV*ELPSAP
Trigger: GGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCT...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGAAGCCGCTCTGGCGTaGGGAGAGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPEAALA*GEWGEG
Trigger: ACCCTCTCCCCACTCTCCCCACGCCAGAGCGGCTTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGAAACAGCATCTGCTCTaGAAGCCGCTCTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLKQHLL*KPLWRG
Trigger: CCCACGCCAGAGCGGCTTCCAGAGCAGATGCTGTTT...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGCTGCAGCATGGCACTaGCATTGCCTGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAAAAWH*HCLCYR
Trigger: TCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGGTTCTGCCTGCTGCTaGAGTGAGAGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLGSACC*SERPGF
Trigger: GAAACCAGGCCTCTCACTCCAGCAGCAGGCAGAACC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGGTTCAGGTCAGACATaGTGTGTGCCTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGGSGQT*CVPAPP
Trigger: AGGAGGGGCAGGCACACACCATGTCTGACCTGAACC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGTACAATGTAACCCTGTaGAGGTCGTGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGYNVTL*RSWGRS
Trigger: GCTCCGGCCCCACGACCTCCACAGGGTTACATTGTA...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCAGGTTCTTCTGCCTTTaGGACCTGGAAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRARFFCL*DLEATA
Trigger: TGCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCT...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTAGTAGCGCAGGGCACTaGCAACTTCCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSSAGH*QLPSLS
Trigger: AGAAAGAGAAGGAAGTTGTCAGTGCCCTGCGCTACT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGGTCAGACCAGCGAATaGGGTTGGCGAGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALGQTSE*GWRGFG
Trigger: ACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGGACAGCTGCTCGTCTaGCTTGCTGAGCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLGQLLV*LAELAY
Trigger: ATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCATTCCAGGCCGTCTGCTaGGGTATCTGGTCTGCGTTA +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPFQAVC*GIWSAL
Trigger: TAACGCAGACCAGATACCTCAGCAGACGGCCTGGAA...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCAGCCGTATACCTCCATaGGGAGCTTGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVSRIPP*GACSSA
Trigger: AGCAGAAGAACAAGCTCCTCATGGAGGTATACGGCT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCAGCCGTATACCTCCATaGGGAGCTTGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCASRIPP*GACSSA
Trigger: AGCAGAAGAACAAGCTCCTCATGGAGGTATACGGCT...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLDAADR*GISGMS
Trigger: GGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTGCTGTCGAGGATGTTaGACTGCTGCCACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALCCRGC*TAATAW
Trigger: CCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCTGGCCTCTCCCCTCTaGATTAACTCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHLASPL*INSPRS
Trigger: GCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCACTGTTCAAAAACCCATaGAGGACTCAAAGTGACATG +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAALFKNP*RTQSDM
Trigger: CATGTCACTTTGAGTCCTTCATGGGTTTTTGAACAG...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAACCAAGGGCTCCCAGTaGGGGCCTGGGGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPTKGSQ*GPGELP
Trigger: AGGCAATTCCCCAGGCCCTCACTGGGAGCCCTTGGT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAATTCTACTGCCTGCTaGTCCAGATCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGNSTAC*SRSKGR
Trigger: TCTCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCTGAGGTATCTGGTCTaGGTTAGAGAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCALRYLV*VREVLL
Trigger: CAGCAAGACCTCTCTAACGCAGACCAGATACCTCAG...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGGCGTATCTGTCTGCTaGCCTGGGGCCAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTGVSVC*PGARGP
Trigger: CGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTTGGGGCCCTCTCACTaGCGTCTCTGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHLGPSH*RLCCPS
Trigger: GGAAGGACAGCAGAGACGGCAGTGAGAGGGCCCCAA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTTGGGGCCCTCTCACTaGCGTCTCTGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGLGPSH*RLCCPS
Trigger: GGAAGGACAGCAGAGACGGCAGTGAGAGGGCCCCAA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGTTCTCATATCTGTACTaGAGCTTCTTGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDGASTAGQSTSCGAAKAFSYLY*SFLMSS
Trigger: GGAGCTCATCAAGAAGCTGCAGTACAGATATGAGAA...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCAGGATGTTGAACTGCTaGCACCGCTTGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVRMLNC*HRLEKF
Trigger: GAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCGAGGCCGGGACTCCTaGCATGCGCCTAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLRGRDS*HAPNRS
Trigger: GGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGDRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAGAGGGGGTCCCGCCTaGCACTGCACGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTRGGPA*HCTAFL
Trigger: GAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGTGAGGACTGACCTCTaGAAGGAACGAGTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALVRTDL*KERVLR
Trigger: GCGGAGGACTCGTTCCTTGCAGAGGTCAGTCCTCAC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCATCTGCCTTTGAGACCTaGAAGCCACAGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPSAFET*KPQHWW
Trigger: CCACCAGTGCTGTGGCTTCCAGGTCTCAAAGGCAGA...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCTCCCCCAAAGACTCTaGCAACGGGCTAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLLPQRL*QRAKVP
Trigger: TGGAACCTTAGCCCGTTGCCAGAGTCTTTGGGGGAG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTCCCCCAAAGACTCTaGCAACGGGCTAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLPQRL*QRAKVP
Trigger: TGGAACCTTAGCCCGTTGCCAGAGTCTTTGGGGGAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCCGCTGAGGGATCTCTaGGATGTCCGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALPLRDL*DVRLSQ
Trigger: CTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTACTGCTGCCACCGCTTaGAGAAGTTCACTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQATAATA*RSSLSR
Trigger: ACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCACTGCTGCCACCGCTTaGAGAAGTTCACTTTCCCGT +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPTAATA*RSSLSR
Trigger: ACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGGCCCCGCTGAGGGCTaGCCAGCCTCATGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCGPAEG*PASWLR
Trigger: TCGGAGCCATGAGGCTGGCCAGCCCTCAGCGGGGCC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCGGGAGGGACATGAGATaGAGTTTAAGGCACACAGCG +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAGRDMR*SLRHTA
Trigger: CGCTGTGTGCCTTAAACTCCATCTCATGTCCCTCCC...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGAAGCCGCTCTGGCGTaGGGAGAGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLEAALA*GEWGEG
Trigger: ACCCTCTCCCCACTCTCCCCACGCCAGAGCGGCTTC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGTGCCTGTGCTACAGATaGGGACTCCTGCGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGCLCYR*GLLRVS
Trigger: TGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCA...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCAGGCAGACAGAGCTGTaGACAGCACCCGACCACAGA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALRQTEL*TAPDHR
Trigger: TCTGTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCT...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAATTGCCTGGGCACACTaGGGCCAGGCACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPIAWAH*GQAQGL
Trigger: CAGACCCTGTGCCTGGCCCCAGTGTGCCCAGGCAAT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAAACGAGTCCTCCGCCTaGCTCACGTCTGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPNESSA*LTSVCE
Trigger: TTCACAGACAGACGTGAGCCAGGCGGAGGACTCGTT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CAA 72 bp AGGCCACGGAACCAGGCGGCACAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCA +
Preference number: 4 (lower is better)
Translates to: RPRNQAAQGRFC*SSAPQALPRLS
Trigger: TGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTGTGCCGCCTGGTTCCGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGCAGGAAGAGAGGGCTaGGCTGTGCTGAATTCGAGG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGAGREG*AVLNSR
Trigger: CCTCGAATTCAGCACAGCTCAGCCCTCTCTTCCTGC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTAAATTCGACAGGGGCTaGGGAACCTCCATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAKFDRG*GTSMLK
Trigger: TTTCAGCATGGAGGTTCCTCAGCCCCTGTCGAATTT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACACTTCCTCCTCCGACTaGGCCGACTCCAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHTSSSD*ADSRAS
Trigger: AGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAAGT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTGGAGGTGGCACACCTaGGTAGCTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALWRWHT*VASSGP
Trigger: TGGACCAGAAGAAGCTACTCAGGTGTGCCACCTCCA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTGGCCAAGTAGGAGTTaGAGTTATTCAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGWPSRS*SYSASA
Trigger: TGCGGAAGCTGAATAACTTCAACTCCTACTTGGCCA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCTCGGCCAGGCCCTCTaGAGTCTGCTTCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLLGQAL*SLLLPL
Trigger: GAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAAAAGTATTTCTTGGATaGTCAAGTCCTCCCTTACTC +
Preference number: 4 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAKVFLG*SSPPLL
Trigger: GAGTAAGGGAGGACTTGATCATCCAAGAAATACTTT...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALLASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPERPGF*GCSMAL
Trigger: CAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCAATTCTACTGCCTGCTaGTCCAGATCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRANSTAC*SRSKGR
Trigger: TCTCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATT...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCTGAGGTATCTGGTCTaGGTTAGAGAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQALRYLV*VREVLL
Trigger: CAGCAAGACCTCTCTAACGCAGACCAGATACCTCAG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGGTGGCGTATCTGTCTaGTGCCCTGGGGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTGGVSV*CPGARG
Trigger: ACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAATCGGGGCTGTGCTCTaGAGGTCCTCCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPIGAVL*RSSPEM
Trigger: CATCTCTGGGGAGGACCTGCAGAGCACAGCCCCGAT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGGCTCAGCTCCCCATTaGACACCAGGCGGAAGACCA +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPGSAPH*TPGGRP
Trigger: TGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCGAGGCCGGGACTCCTaGCATGCGCCTAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLRGRDS*HAPNRS
Trigger: GGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCTTCTGCCCACCCAGCTaGTTGCCCCCATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLFCPPS*LPPFQG
Trigger: GCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAA...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPDRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGGGATGACAGAGACTaGTGCTGCTCTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTRDDRD*CCSQAG
Trigger: GCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATCCCG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGATGGAGGAGGGAGGTaGTGGCCTCTCCCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPDGGGR*WPLPSE
Trigger: TTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCGGGTGCCTCAGGGATaGCCTTCCCTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCRVPQG*PSLPGA
Trigger: TGCCCCTGGGAGGGAAGGGCATCCCTGAGGCACCCG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGAGGGACCATTCGGGTaGCTCAGGGATGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTEGPFG*LRDALP
Trigger: GGGAAGGGCATCCCTGAGGCACCCGAATGGTCCCTC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGTGAGCACTCATTCATaGACAGCAGACCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALVSTHS*TADPEA
Trigger: TGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCAC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGGTCCCGCCTGCCACTaGACGGCTTTCCTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLGPACH*TAFLPL
Trigger: TAGAGGGAGGAAAGCCGTGCAGTGGCAGGCGGGACC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCACATACATCGCACCTTaGCGTCCTCACGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGTYIAP*RPHAGS
Trigger: GCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTCTGCCTTTGAGACCTaGAAGCCACAGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALSAFET*KPQHWW
Trigger: CCACCAGTGCTGTGGCTTCCAGGTCTCAAAGGCAGA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCGACCTCTTCATCCGTaGCATCTGGGAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHRPLHP*HLGGAQ
Trigger: CTGAGCTCCTCCCAGATGCCACGGATGAAGAGGTCG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTTGGGTGGCAATGCTaGTGGAGGACTATTATCAAC +
Preference number: 4 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVLGWQC*WRTIIN
Trigger: GTTGATAATAGTCCTCCACCAGCATTGCCACCCAAG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGCAAACTGGAGCCACTaGTGGCTCGGCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLANWSH*WLGSWG
Trigger: CCCCCATGAGCCGAGCCACCAGTGGCTCCAGTTTGC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGATGTGCTCGTTCTGTaGCGTCTGGTAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCADVLVL*RLVEHR
Trigger: TCTATGTTCTACCAGACGCCACAGAACGAGCACATC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCCGCTGAGGGATCTCTaGGATGTCCGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHPLRDL*DVRLSQ
Trigger: CTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTCAGTCTCAGTAGCATaGACCAGTAAGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGSVSVA*TSKMSP
Trigger: TGGGGACATCTTACTGGTCCATGCTACTGAGACTGA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCTTGATGAGCTCCTCTaGGGAGATGAAGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRALDELL*GDEGPV
Trigger: TACAGGACCTTCATCTCCCCAGAGGAGCTCATCAAG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGACTCCAGCCTGCGGATaGGCGCCGAGTCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGTPACG*APSPGQ
Trigger: CTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCACCCGTCGATGTAGTCTaGGTTTCCCAGGTGAACGAA +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPPVDVV*VSQVNE
Trigger: TTCGTTCACCTGGGAAACCCAGACTACATCGACGGG...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGCCTCCTCAGCCAGGTaGTCACTGAAGTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLASSAR*SLKSLK
Trigger: CTTCAATGACTTCAGTGACCACCTGGCTGAGGAGGC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCACACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPHPPLP*SADEVS
Trigger: AGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTG...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAGGCAGACAGAGCTGTaGACAGCACCCGACCACAGA +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHRQTEL*TAPDHR
Trigger: TCTGTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAGTAGCGCAGGGCACTaGCAACTTCCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGSSAGH*QLPSLS
Trigger: AGAAAGAGAAGGAAGTTGTCAGTGCCCTGCGCTACT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCCTTTTCCTGTAACATaGTTATGGACCGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAPFPVT*LWTGPS
Trigger: ACTGGGTCCGGTCCATAATCATGTTACAGGAAAAGG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTGGCCAAGTAGGAGTTaGAGTTATTCAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAWPSRS*SYSASA
Trigger: TGCGGAAGCTGAATAACTTCAACTCCTACTTGGCCA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAAGGGGAAGCGGAAAGTaGAAGGATCCTCCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPRGSGK*KDPPPS
Trigger: ACTCGGGGGAGGATCCTTTCACTTTCCGCTTCCCCT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCTGGCCTCAGTTTGGTaGGGTTCAGAAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGLASVW*GSEDSQ
Trigger: CTGGGAGTCTTCTGAACCTCACCAAACTGAGGCCAG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCATAAATTCTACTGCCTaGTGCTCCAGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PESTLHSAHPAACPHSRAINSTA*CSRSKG
Trigger: CCCCTTGGATCTGGAGCAGCAGGCAGTAGAATTTAT...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTGGCCTCCAGCACCTTaGTGGCTGACCCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTWPPAP*WLTLEA
Trigger: TGCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTGAGGTATCTGGTCTaGGTTAGAGAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLRYLV*VREVLL
Trigger: CAGCAAGACCTCTCTAACGCAGACCAGATACCTCAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGGGAGGCTGCGCTCCTaGGCTTCTTCTCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCGRLRS*ASSRGE
Trigger: CTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCCTCCC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCTCATTCTGCTCTTTTaGCCAAAGCAAAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSLILLF*PKQNLR
Trigger: CCTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAACGAAGGTCAGGTCCTaGAGGATCAGCCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPTKVRS*RISPRY
Trigger: GTACCTGGGGCTGATCCTGCAGGACCTGACCTTCGT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCCCCCGAGTCTACTCTaGATTCTGCCCACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLPPSLL*ILPTQL
Trigger: CAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGGGG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCAGAGGGTGCGCTTGCTaGAGCTGCTGCCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLRGCAC*SCCLRR
Trigger: CCTCCTAAGGCAGCAGCTGCAGCAAGCGCACCCTCT...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAAGCACAGTTAGACCCTaGTGTTCACTTGACCACGTC +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPSTVRP*CSLDHV
Trigger: GACGTGGTCAAGTGAACAGCAGGGTCTAACTGTGCT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAGAGGGGGTCCCGCCTaGCACTGCACGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCRGGPA*HCTAFL
Trigger: GAGGAAAGCCGTGCAGTGGCAGGCGGGACCCCCTCT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCGTTCACAGGCTTCTCTaGAATCTTTACGGACACCTC +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPVHRLL*NLYGHL
Trigger: GAGGTGTCCGTAAAGATTCCAGAGAAGCCTGTGAAC...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCCTTCCAGCATCACTTaGTCAGACCAGCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALPSSIT*SDQRMR
Trigger: CCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTGCTGGCAGGGGAACTaGGCTTCACGGGGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGCWQGN*ASRGSS
Trigger: CGACGAGCCCCGTGAAGCCCAGTTCCCCTGCCAGCA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGGGTGGCAATGCTGGTaGAGGACTATTATCAACCAC +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLGWQCW*RTIINH
Trigger: GTGGTTGATAATAGTCCTCCACCAGCATTGCCACCC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCTGGTGGCTCGGCTCATaGGGGCCACCACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCWWLGS*GPPQPL
Trigger: GAGTGGCTGTGGTGGCCCCCATGAGCCGAGCCACCA...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGTCTTTCCCAGCCGGTaGCTCCAGCTGCCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLVFPSR*LQLPLL
Trigger: AAGCAGCGGCAGCTGGAGCCACCGGCTGGGAAAGAC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGACATAATTTCGTTGTaGTCAATGAGGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: HAPNRSKVLSGLGAALCADIISL*SMRDSS
Trigger: CGAGCTGTCCCTCATTGACCACAACGAAATTATGTC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCACCCACCACTTCCTTaGTCTGCTGATGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALHPPLP*SADEVS
Trigger: AGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTCTCAGCTCCCCAGGTaGTGTGGGAGGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGSQLPR*CGRGPV
Trigger: CACTGGGCCCCTCCCACACCACCTGGGGAGCTGAGA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGAAGCCGCTCTGGCGTaGGGAGAGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCEAALA*GEWGEG
Trigger: ACCCTCTCCCCACTCTCCCCACGCCAGAGCGGCTTC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCTCTGGAAGCCGCTCTaGCGTGGGGAGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGLWKPL*RGESGE
Trigger: CTCCCCACTCTCCCCACGCCAGAGCGGCTTCCAGAG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCATGCTCATGTGCTGCCTaGGCCCTGCTGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPCSCAA*ALLLRT
Trigger: TGTTCTGAGCAGCAGGGCCCAGGCAGCACATGAGCA...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAACGAGTCCTCCGCCTaGCTCACGTCTGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHNESSA*LTSVCE
Trigger: TTCACAGACAGACGTGAGCCAGGCGGAGGACTCGTT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CAA 72 bp CTGCCTGCCATCAATAAGTTAGACATACATCGCACCTaGCCGTCCTCACGCAGGGAGCCCCTGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPAINKLDIHRT*PSSRREPLGTA
Trigger: AGCAGTGCCCAGGGGCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGTCTAACTTATTGATGGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCATCTCCTTGTCTTCTaGGTTCACGCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALHLLVF*VHAFQH
Trigger: ATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGGACAGCTGCTCGTCTaGCTTGCTGAGCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPGQLLV*LAELAY
Trigger: ATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTTTCGTTGTGGTCAATaGGGGACAGCTCGTCCACTT +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALFRCGQ*GTARPL
Trigger: AAGTGGACGAGCTGTCCCTCATTGACCACAACGAAA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGCTCCTCTGGGGAGATaGAGGTCCTGTAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTAPLGR*RSCRWS
Trigger: TGACCACCTACAGGACCTTCATCTCCCCAGAGGAGC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGCTATCTCATGGCTGTaGAAGTCGTGCAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPAISWL*KSCKVP
Trigger: GGGGACCTTGCACGACTTTCACAGCCATGAGATAGC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGACCAAGGGCTCCCAGTaGGGGCCTGGGGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGTKGSQ*GPGELP
Trigger: AGGCAATTCCCCAGGCCCTCACTGGGAGCCCTTGGT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTCTGTCTGTGAAGACTaGTTCCCACAACCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSVCED*FPQPAR
Trigger: CCGGGCGGGTTGTGGGAATCAGTCTTCACAGACAGA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGGCGGGGCCAGCTCCTaGACGGAGTCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITGGASS*TESTPL
Trigger: CAGTGGGGTGGACTCCGTGCAGGAGCTGGCCCCGCC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGTAGGTGGTCAGGAATaGCTCGCAGTACAACACCAA +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALVGGQE*LAVQHQ
Trigger: TTGGTGTTGTACTGCGAGGCATTCCTGACCACCTAC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGTTCTCATATCTGTACTaGAGCTTCTTGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGFSYLY*SFLMSS
Trigger: GGAGCTCATCAAGAAGCTGCAGTACAGATATGAGAA...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGACATGTTGTTGAAGTaGTCCGTGAACTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPDMLLK*SVNWVK
Trigger: CTTGACCCAGTTCACGGAGCACTTCAACAACATGTC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCATCTGCCTTTGAGACCTaGAAGCCACAGCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPSAFET*KPQHWW
Trigger: CCACCAGTGCTGTGGCTTCCAGGTCTCAAAGGCAGA...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGGGTGGCAATGCTGGTaGAGGACTATTATCAACCAC +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALGWQCW*RTIINH
Trigger: GTGGTTGATAATAGTCCTCCACCAGCATTGCCACCC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCATCTGTCTGCTGCCCTaGGGCCAGAGGTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCICLLP*GQRSVW
Trigger: CCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGAT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGGATGTGCTCGTTCTGTaGCGTCTGGTAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLDVLVL*RLVEHR
Trigger: TCTATGTTCTACCAGACGCCACAGAACGAGCACATC...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAAGTGCTCCGTGAACTaGGTCAAGTTGGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGKCSVN*VKLGLF
Trigger: GAAGAGCCCCAACTTGACCCAGTTCACGGAGCACTT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCTCGAGCATTCTCCTaGATCCCGGCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLPRAFS*IPASAP
Trigger: AGGAGCAGACGCCGGGATCCAGGAGAATGCTCGAGG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAGCATTCAACAGAGCTaGGCAAGGGAAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHSIQQS*AREGER
Trigger: TCTCTCCCCTTCCCTTGCCCAGCTCTGTTGAATGCT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGATTGCCTGGGCACACTaGGGCCAGGCACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGIAWAH*GQAQGL
Trigger: CAGACCCTGTGCCTGGCCCCAGTGTGCCCAGGCAAT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGGTTCAGGTCAGACATaGTGTGTGCCTGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLGSGQT*CVPAPP
Trigger: AGGAGGGGCAGGCACACACCATGTCTGACCTGAACC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCAAAATCCTGCCTATTaGTTCCAACAGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGQNPAY*FQQANW
Trigger: CCAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCAAAATCCTGCCTATTaGTTCCAACAGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLQNPAY*FQQANW
Trigger: CCAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTTCTGGGTCACCGGTTaGCTCAGGAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHFWVTG*LRSSKI
Trigger: GATTTTACTGCTCCTGAGTCAACCGGTGACCCAGAA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGAAAGTATTTCTTGGATaGTCAAGTCCTCCCTTACTC +
Preference number: 4 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGKVFLG*SSPPLL
Trigger: GAGTAAGGGAGGACTTGATCATCCAAGAAATACTTT...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAATTCGAGGATCGTTCTaGACCAGGGGTAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPIRGSF*TRGKMA
Trigger: GGCCATCTTACCCCTGGTGCAGAACGATCCTCGAAT...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTCAACATCAAAATCCTaGCTATTGATTCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSTSKS*LLIPTG
Trigger: GCCTGTTGGAATCAATAGGCAGGATTTTGATGTTGA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCCGTCATCACCCTCCTaGTTGAGCGTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCPSSPS*LSVSLD
Trigger: GTCCAGGCTGACGCTCAAGCAGGAGGGTGATGACGG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGCTCATTCTGCTCTTTTaGCCAAAGCAAAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLLILLF*PKQNLR
Trigger: CCTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAG...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTCTCTTCTCCTCATTCTaGTCTTTTGCCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQALFSSF*SFAQSK
Trigger: TTTGCTTTGGGCAAAAGAGCAGAATGAGGAGAAGAG...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTCTTCTCCTCATTCTaGTCTTTTGCCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLFSSF*SFAQSK
Trigger: TTTGCTTTGGGCAAAAGAGCAGAATGAGGAGAAGAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCTCTGAAGTCTGCTTCTaGCACTCCAGCCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLSEVCF*HSSLRM
Trigger: CATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGA...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAGGATGTTGAACTGCTaGCACCGCTTGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGRMLNC*HRLEKF
Trigger: GAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGATGGAAACAGCATCTaGTCTGGAAGCCGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLDGNSI*SGSRSG
Trigger: GCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAGCACAGTTAGACCCTaGTGTTCACTTGACCACGTC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHSTVRP*CSLDHV
Trigger: GACGTGGTCAAGTGAACAGCAGGGTCTAACTGTGCT...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGGCACCAGGGGTAAGATaGCCTCCAGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGAPGVR*PPAPCW
Trigger: CCAGCAAGGTGCTGGAGGCCATCTTACCCCTGGTGC...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCTTGGGTGGCAATGCTaGTGGAGGACTATTATCAAC +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALLGWQC*WRTIIN
Trigger: GTTGATAATAGTCCTCCACCAGCATTGCCACCCAAG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCCGTCGATGTAGTCTaGGTTTCCCAGGTGAACGAA +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPPVDVV*VSQVNE
Trigger: TTCGTTCACCTGGGAAACCCAGACTACATCGACGGG...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGCTGCAGCATGGCACTaGCATTGCCTGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLAAAWH*HCLCYR
Trigger: TCTGTAGCACAGGCAATGCCAGTGCCATGCTGCAGC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCCTTTTCCTGTAACATaGTTATGGACCGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGPFPVT*LWTGPS
Trigger: ACTGGGTCCGGTCCATAATCATGTTACAGGAAAAGG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCCTGCAGGTGAGGACTaGCCTCTGCAAGGAACGAGT +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCPAGED*PLQGTS
Trigger: ACTCGTTCCTTGCAGAGGTCAGTCCTCACCTGCAGG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTTCAACATCAAAATCCTaGCTATTGATTCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQASTSKS*LLIPTG
Trigger: GCCTGTTGGAATCAATAGGCAGGATTTTGATGTTGA...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTTCTCATATCTGTACTaGAGCTTCTTGATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLFSYLY*SFLMSS
Trigger: GGAGCTCATCAAGAAGCTGCAGTACAGATATGAGAA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCTCTTCTCCTCATTCTaGTCTTTTGCCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGLFSSF*SFAQSK
Trigger: TTTGCTTTGGGCAAAAGAGCAGAATGAGGAGAAGAG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCGACATGTTGTTGAAGTaGTCCGTGAACTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGDMLLK*SVNWVK
Trigger: CTTGACCCAGTTCACGGAGCACTTCAACAACATGTC...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGTCTACTCTGCATTCTaGCCACCCAGCTGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCVYSAF*PPSCLP
Trigger: GGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGAC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCGCATGGCACTGGCATTaGCTGTGCTACAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLAWHWH*LCYRWG
Trigger: TCCCCATCTGTAGCACAGGCAATGCCAGTGCCATGC...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGAGGGCCTGGGGAATTaGCTGGGCACACTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITEGLGN*LGTLGP
Trigger: TGGCCCCAGTGTGCCCAGGCAATTCCCCAGGCCCTC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCACATACATCGCACCTTaGCGTCCTCACGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCTYIAP*RPHAGS
Trigger: GCTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCGACCTCTTCATCCGTaGCATCTGGGAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGRPLHP*HLGGAQ
Trigger: CTGAGCTCCTCCCAGATGCCACGGATGAAGAGGTCG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAAGTGCTCCGTGAACTaGGTCAAGTTGGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTKCSVN*VKLGLF
Trigger: GAAGAGCCCCAACTTGACCCAGTTCACGGAGCACTT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCAAGTGCTCCGTGAACTaGGTCAAGTTGGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLKCSVN*VKLGLF
Trigger: GAAGAGCCCCAACTTGACCCAGTTCACGGAGCACTT...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCAGGTCCTCTCCGGTCTaGGAGCTGCCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASRSSPV*ELPSAP
Trigger: GGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCT...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAAGATTCAGGGACCCTaGAGCTTAGGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCKIQGP*SLGRGS
Trigger: GCTCCCCCTCCCTAAGCTCCAGGGTCCCTGAATCTT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGGGAGGGACATGAGATaGAGTTTAAGGCACACAGCG +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTGRDMR*SLRHTA
Trigger: CGCTGTGTGCCTTAAACTCCATCTCATGTCCCTCCC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAGGAGCCCTGCTGGCTaGCCCAGGATGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITRSPAG*PRMGQG
Trigger: TCCTTGCCCCATCCTGGGCCAGCCAGCAGGGCTCCT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTATCAGACAGGTTAGCTaGGGCATATATATTACAATG +
Preference number: 4 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSIRQVS*GIYITM
Trigger: CATTGTAATATATATGCCCCAGCTAACCTGTCTGAT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCACGCTCGCCTCGGCCCTaGCTCGCCACGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPRSPRP*LATPQT
Trigger: GGTCTGAGGCGTGGCGAGCCAGGGCCGAGGCGAGCG...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372195.5
CDS-3UTR TCA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTGGTTTTCCCTTCTTTaGTGGCGTTCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLWFSLL*WRSLDF
Trigger: AAAATCAAGAGAACGCCATCAAAGAAGGGAAAACCA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAGTAGCGCAGGGCACTaGCAACTTCCTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSSAGH*QLPSLS
Trigger: AGAAAGAGAAGGAAGTTGTCAGTGCCCTGCGCTACT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAGGGCTGAGCTGTGCTaGATTCGAGGATCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCRAELC*IRGSFC
Trigger: GCAGAACGATCCTCGAATTCAGCACAGCTCAGCCCT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTTCTGGGTCACCGGTTaGCTCAGGAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTFWVTG*LRSSKI
Trigger: GATTTTACTGCTCCTGAGTCAACCGGTGACCCAGAA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCTTTCGTTGTGGTCAATaGGGGACAGCTCGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLFRCGQ*GTARPL
Trigger: AAGTGGACGAGCTGTCCCTCATTGACCACAACGAAA...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCTGGAGGTGGCACACCTaGGTAGCTTCTTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCWRWHT*VASSGP
Trigger: TGGACCAGAAGAAGCTACTCAGGTGTGCCACCTCCA...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTATCAACCACCCGAATaGCAGGCAGAGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGYQPPE*QAEEAW
Trigger: CCAAGCCTCCTCTGCCTGGCATTCGGGTGGTTGATA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTTTCTTGGGTGGCAATaGTGGTGGAGGACTATTATC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHFLGWQ*WWRTII
Trigger: GATAATAGTCCTCCACCAGCATTGCCACCCAAGAAA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGGTGGCGTATCTGTCTaGTGCCCTGGGGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITGGVSV*CPGARG
Trigger: ACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGGGAGGCTGCGCTCCTaGGCTTCTTCTCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASGRLRS*ASSRGE
Trigger: CTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCCTCCC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAGGATGTTGAACTGCTaGCACCGCTTGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTRMLNC*HRLEKF
Trigger: GAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCTCGAGGATGTTGAACTaGTGCCACCGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLSRMLN*CHRLEK
Trigger: CTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGA...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGATGGAAACAGCATCTaGTCTGGAAGCCGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCDGNSI*SGSRSG
Trigger: GCCAGAGCGGCTTCCAGAGCAGATGCTGTTTCCATC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGTTCCCGCAGCGCCCTaGCTGCAGGCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASVPAAP*LQAHAG
Trigger: TCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAAC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGGGTGGCAATGCTGGTaGAGGACTATTATCAACCAC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLGWQCW*RTIINH
Trigger: GTGGTTGATAATAGTCCTCCACCAGCATTGCCACCC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAACTGGAGCCACTGGTaGCTCGGCTCATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITNWSHW*LGSWGP
Trigger: TGGCCCCCATGAGCCGAGCCACCAGTGGCTCCAGTT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTCTCCACCATATGAGTaGCTGCCTCCTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGSPPYE*LPPDSR
Trigger: GCGACTGTCAGGAGGCAGCCACTCATATGGTGGAGA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCAGAGGTCCGTCTGGCTaGGGATGGCCGCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASRGPSG*GWPPRG
Trigger: GCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCT...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTATCAGACAGGTTAGCTaGGGCATATATATTACAATG +
Preference number: 4 (lower is better)
Translates to: HGQAAALSTELSNNQGQAIRQVS*GIYITM
Trigger: CATTGTAATATATATGCCCCAGCTAACCTGTCTGAT...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTCTCTTGATTTTGGGTaGGTGGAATTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGSLDFG*VEFVHQ
Trigger: CTGATGGACAAATTCCACTCACCCAAAATCAAGAGA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTTGATGGCGTTCTCTTaGTTTTGGGTGAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGLMAFS*FWVSGI
Trigger: AATTCCACTCACCCAAAATCAAGAGAACGCCATCAA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTGGTTTTCCCTTCTTTaGTGGCGTTCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: EGEHPPLPWSADEVSAALWFSLL*WRSLDF
Trigger: AAAATCAAGAGAACGCCATCAAAGAAGGGAAAACCA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGAGGTTCTTCTGCCTTTaGGACCTGGAAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGRFFCL*DLEATA
Trigger: TGCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATCCCAGGGACGCCGCTaGCCGCTGAGGGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPSQGRR*PLRDLW
Trigger: CCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCCTTTTCCTGTAACATaGTTATGGACCGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLPFPVT*LWTGPS
Trigger: ACTGGGTCCGGTCCATAATCATGTTACAGGAAAAGG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACACTGGCCTCTCCCCTCTaGATTAACTCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITLASPL*INSPRS
Trigger: GCTCCTGGGGGAGTTAATTCAGAGGGGAGAGGCCAG...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACCTGTTCAAAAACCCATaGAGGACTCAAAGTGACATG +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHLFKNP*RTQSDM
Trigger: CATGTCACTTTGAGTCCTTCATGGGTTTTTGAACAG...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCACCAAGGGCTCCCAGTaGGGGCCTGGGGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASTKGSQ*GPGELP
Trigger: AGGCAATTCCCCAGGCCCTCACTGGGAGCCCTTGGT...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAATCGGGGCTGTGCTCTaGAGGTCCTCCCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITIGAVL*RSSPEM
Trigger: CATCTCTGGGGAGGACCTGCAGAGCACAGCCCCGAT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTTCAGCTTCCGCAAGTaGTTCATGATCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHFSFRK*FMILMN
Trigger: GTTCATCAAGATCATGAAGCACTTGCGGAAGCTGAA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCCCAGGTACGGGATaGACGGCGGTTCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPAPGTG*TAVPPP
Trigger: CGGAGGTGGAACCGCCGTGCATCCCGTACCTGGGGC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTCACACCATCCTCCATaGATCAGAAGGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGSHHPP*IRRGSG
Trigger: TCCGCTTCCCCTTCTGATGCATGGAGGATGGTGTGA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGAGGGACCATTCGGGTaGCTCAGGGATGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASEGPFG*LRDALP
Trigger: GGGAAGGGCATCCCTGAGGCACCCGAATGGTCCCTC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCAGCACAGTTAGACCCTaGTGTTCACTTGACCACGTC +
Preference number: 4 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLSTVRP*CSLDHV
Trigger: GACGTGGTCAAGTGAACAGCAGGGTCTAACTGTGCT...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTGGGCACTGCTCATGTaGTGCCTGGGCCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASWALLM*CLGPAA
Trigger: AGCAGCAGGGCCCAGGCAGCACATGAGCAGTGCCCA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCCTTCCAGCATCACTTaGTCAGACCAGCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCPSSIT*SDQRMR
Trigger: CCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCCTTCCAGCATCACTTaGTCAGACCAGCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGPSSIT*SDQRMR
Trigger: CCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGGCCATCAGGCTTGCTaGCAGGGGAACTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITGHQAC*QGNWAS
Trigger: TGAAGCCCAGTTCCCCTGCCAGCAAGCCTGATGGCC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCTTGGGTGGCAATGCTaGTGGAGGACTATTATCAAC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLLGWQC*WRTIIN
Trigger: GTTGATAATAGTCCTCCACCAGCATTGCCACCCAAG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACACCTCGAGCATTCTCCTaGATCCCGGCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITPRAFS*IPASAP
Trigger: AGGAGCAGACGCCGGGATCCAGGAGAATGCTCGAGG...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAATCAGACAGGTTAGCTaGGGCATATATATTACAATG +
Preference number: 4 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPIRQVS*GIYITM
Trigger: CATTGTAATATATATGCCCCAGCTAACCTGTCTGAT...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGTTTTCCCTTCTTTaGTGGCGTTCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGWFSLL*WRSLDF
Trigger: AAAATCAAGAGAACGCCATCAAAGAAGGGAAAACCA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCAGGAAGAGAGGGCTaGGCTGTGCTGAATTCGAGG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITAGREG*AVLNSR
Trigger: CCTCGAATTCAGCACAGCTCAGCCCTCTCTTCCTGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCATCTCCTTGTCTTCTaGGTTCACGCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCHLLVF*VHAFQH
Trigger: ATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCAAAATCCTGCCTATTaGTTCCAACAGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLQNPAY*FQQANW
Trigger: CCAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGAAATTCGACAGGGGCTaGGGAACCTCCATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGKFDRG*GTSMLK
Trigger: TTTCAGCATGGAGGTTCCTCAGCCCCTGTCGAATTT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAAATTCGACAGGGGCTaGGGAACCTCCATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCKFDRG*GTSMLK
Trigger: TTTCAGCATGGAGGTTCCTCAGCCCCTGTCGAATTT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGAGCCGTATACCTCCATaGGGAGCTTGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGSRIPP*GACSSA
Trigger: AGCAGAAGAACAAGCTCCTCATGGAGGTATACGGCT...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCAGCGAGAATGGTTTTaGCGAGGAGGATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCQREWF*RGGWKQ
Trigger: CTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAACCCTGCTGTTCACTTaGCCACGTCCTAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITTLLFT*PRPKPG
Trigger: CCCGGGTTTAGGACGTGGTCAAGTGAACAGCAGGGT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACATCTGTCTGTGAAGACTaGTTCCCACAACCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSVCED*FPQPAR
Trigger: CCGGGCGGGTTGTGGGAATCAGTCTTCACAGACAGA...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAATTCTACTGCCTGCTaGTCCAGATCCAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCNSTAC*SRSKGR
Trigger: TCTCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGGAGACGGACGTCCCTaGTTCTCGATGGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASGDGRP*FSMVSL
Trigger: CAGGCTCACCATCGAGAAGCAGGGACGTCCGTCTCC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTCTCACTGCCGTCTCTaGTGTCCTTCCCAGGGACGC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASSHCRL*CPSQGR
Trigger: GCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAGA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTTGGGGCCCTCTCACTaGCGTCTCTGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASLGPSH*RLCCPS
Trigger: GGAAGGACAGCAGAGACGGCAGTGAGAGGGCCCCAA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGGTAGGTGGTCAGGAATaGCTCGCAGTACAACACCAA +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGVGGQE*LAVQHQ
Trigger: TTGGTGTTGTACTGCGAGGCATTCCTGACCACCTAC...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCATTCAGCTTCCGCAAGTaGTTCATGATCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPFSFRK*FMILMN
Trigger: GTTCATCAAGATCATGAAGCACTTGCGGAAGCTGAA...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAACGAAGGTCAGGTCCTaGAGGATCAGCCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITTKVRS*RISPRY
Trigger: GTACCTGGGGCTGATCCTGCAGGACCTGACCTTCGT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAATTGGCAACAAGACCTaGCTGCTGGCTGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITIGNKT*LLAALR
Trigger: CCTCAGGGCAGCCAGCAGGCAGGTCTTGTTGCCAAT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCTTGCTGCAGCTGCTaGCTTAGGAGGCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITACCSC*LRRLLC
Trigger: ACAGAGGAGCCTCCTAAGGCAGCAGCTGCAGCAAGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCCCAAGGGCCCTGTGTaGAGAGCGGCCCTCACACGC +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLPKGPV*RAALTR
Trigger: GCGTGTGAGGGCCGCTCTGCACACAGGGCCCTTGGG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGCCGGAGCGGGAAGATaGTCCCCAGAATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASAGAGR*SPESGS
Trigger: TGAACCCGATTCTGGGGAGCATCTTCCCGCTCCGGC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACACGACCTCTTCATCCGTaGCATCTGGGAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITRPLHP*HLGGAQ
Trigger: CTGAGCTCCTCCCAGATGCCACGGATGAAGAGGTCG...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCCCTCGAGCATTCTCCTaGATCCCGGCGTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASPRAFS*IPASAP
Trigger: AGGAGCAGACGCCGGGATCCAGGAGAATGCTCGAGG...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAAGATTCAGGGACCCTaGAGCTTAGGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITKIQGP*SLGRGS
Trigger: GCTCCCCCTCCCTAAGCTCCAGGGTCCCTGAATCTT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCACCTGCAGGCTCATGCTaGAGGCCACGGAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPPAGSC*RPRNQA
Trigger: CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGG...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTCTCTTGATTTTGGGTaGGTGGAATTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSLDFG*VEFVHQ
Trigger: CTGATGGACAAATTCCACTCACCCAAAATCAAGAGA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTTGATGGCGTTCTCTTaGTTTTGGGTGAGTGGAATT +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTLMAFS*FWVSGI
Trigger: AATTCCACTCACCCAAAATCAAGAGAACGCCATCAA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACATTCCAGGCCGTCTGCTaGGGTATCTGGTCTGCGTTA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITFQAVC*GIWSAL
Trigger: TAACGCAGACCAGATACCTCAGCAGACGGCCTGGAA...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLDAADR*GISGMS
Trigger: GGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGCTATCTCATGGCTGTaGAAGTCGTGCAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITAISWL*KSCKVP
Trigger: GGGGACCTTGCACGACTTTCACAGCCATGAGATAGC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCCCTTTCCGGGCCTGCTaGAAAGCTCACACCATCCTC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASPFRAC*KAHTIL
Trigger: GAGGATGGTGTGAGCTTTTCAGCAGGCCCGGAAAGG...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACATCCAGAGAGGACAGCTaGTCGTCTGACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSREDS*SSDLLS
Trigger: GCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGA...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGGACATGTTGTTGAAGTaGTCCGTGAACTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGDMLLK*SVNWVK
Trigger: CTTGACCCAGTTCACGGAGCACTTCAACAACATGTC...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCTTCAGCTTCCGCAAGTaGTTCATGATCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLFSFRK*FMILMN
Trigger: GTTCATCAAGATCATGAAGCACTTGCGGAAGCTGAA...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCAGCTGTCGATCAGTGTaGAGTACTCGGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASSCRSV*STRPGP
Trigger: AGGGCCTGGCCGAGTACTGCACACTGATCGACAGCT...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGGGCAGAGCACCAGCTaGGGGGCTGCTAAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLGQSTS*GAAKAS
Trigger: TGACGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCACGGGATGACAGAGACTaGTGCTGCTCTCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPRDDRD*CCSQAG
Trigger: GCCCGCCTGAGAGCAGCAGCAGTCTCTGTCATCCCG...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGTGCTGCCTGGGCCCTaGTGCTCAGAACACCAAGGG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPVLPGP*CSEHQG
Trigger: CCCTTGGTGTTCTGAGCAGCAGGGCCCAGGCAGCAC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGTGAGGACTGACCTCTaGAAGGAACGAGTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASVRTDL*KERVLR
Trigger: GCGGAGGACTCGTTCCTTGCAGAGGTCAGTCCTCAC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGTCAGTCTCAGTAGCATaGACCAGTAAGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGSVSVA*TSKMSP
Trigger: TGGGGACATCTTACTGGTCCATGCTACTGAGACTGA...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCAGACCCGGAGGCATaGGCTGGGGCAGCACAACTG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLADPEA*AGAAQL
Trigger: CAGTTGTGCTGCCCCAGCCCATGCCTCCGGGTCTGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAATTGCCTGGGCACACTaGGGCCAGGCACAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPIAWAH*GQAQGL
Trigger: CAGACCCTGTGCCTGGCCCCAGTGTGCCCAGGCAAT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCACGCAGGGAGCCCCTaGGCACTGCTCATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLHAGSP*ALLMCC
Trigger: GCAGCACATGAGCAGTGCCCAGGGGCTCCCTGCGTG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
3UTR CAA 72 bp TTGCCCAGATTGTCAAGCTCAGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACAGCATCTGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPRLSSSAARMV*TRRMETASALE
Trigger: TTCCAGAGCAGATGCTGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGCTGAGCTTGACAATCTGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCAGGCCGCAGCACTaGGCACAGAGCTCAGCAATA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPARPQH*AQSSAI
Trigger: TATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCTCAACATCAAAATCCTaGCTATTGATTCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTSTSKS*LLIPTG
Trigger: GCCTGTTGGAATCAATAGGCAGGATTTTGATGTTGA...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCTCATTCTGCTCTTTTaGCCAAAGCAAAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHSFEISEDSGTLELREGLILLF*PKQNLR
Trigger: CCTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGACAGAGACTGCTGCTaGTCTCAGGCGGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPDRDCC*SQAGKG
Trigger: TCCCTTGCCCGCCTGAGAGCAGCAGCAGTCTCTGTC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCAAACTGGAGCCACTaGTGGCTCGGCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLANWSH*WLGSWG
Trigger: CCCCCATGAGCCGAGCCACCAGTGGCTCCAGTTTGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAGCATTCAACAGAGCTaGGCAAGGGAAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSIQQS*AREGER
Trigger: TCTCTCCCCTTCCCTTGCCCAGCTCTGTTGAATGCT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATGCTGTCGAGGATGTTaGACTGCTGCCACCGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPCCRGC*TAATAW
Trigger: CCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGAGAGGCCTGGTTTCTaGGGCTGCAGCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLERPGF*GCSMAL
Trigger: CAGTGCCATGCTGCAGCCTCAGAAACCAGGCCTCTC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGGCTCAGCTCCCCATTaGACACCAGGCGGAAGACCA +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLGSAPH*TPGGRP
Trigger: TGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAACGAAGGTCAGGTCCTaGAGGATCAGCCCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPTKVRS*RISPRY
Trigger: GTACCTGGGGCTGATCCTGCAGGACCTGACCTTCGT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCCCCCGAGTCTACTCTaGATTCTGCCCACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLPPSLL*ILPTQL
Trigger: CAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGGGG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCACGGTTCTGCCTGCTaGTGGAGTGAGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLHGSAC*WSERPG
Trigger: ACCAGGCCTCTCACTCCAGCAGCAGGCAGAACCGTG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAAGACACGGTTCTGCCTaGTGCTGGAGTGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPRHGSA*CWSERP
Trigger: AGGCCTCTCACTCCAGCAGCAGGCAGAACCGTGTCT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCCGGAGCGGGAAGATaGTCCCCAGAATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLAGAGR*SPESGS
Trigger: TGAACCCGATTCTGGGGAGCATCTTCCCGCTCCGGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGGCCATCAGGCTTGCTaGCAGGGGAACTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLGHQAC*QGNWAS
Trigger: TGAAGCCCAGTTCCCCTGCCAGCAAGCCTGATGGCC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAAAGATTCAGGGACCCTaGAGCTTAGGGAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPKIQGP*SLGRGS
Trigger: GCTCCCCCTCCCTAAGCTCCAGGGTCCCTGAATCTT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCAGGAAGAGAGGGCTaGGCTGTGCTGAATTCGAGG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLAGREG*AVLNSR
Trigger: CCTCGAATTCAGCACAGCTCAGCCCTCTCTTCCTGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTTCTGGGTCACCGGTTaGCTCAGGAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASFWVTG*LRSSKI
Trigger: GATTTTACTGCTCCTGAGTCAACCGGTGACCCAGAA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTCTGGGTTTCCCAGGTaGACGAAGGTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLSGFPR*TKVRSC
Trigger: GCAGGACCTGACCTTCGTTCACCTGGGAAACCCAGA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCAAAGTATTTCTTGGATaGTCAAGTCCTCCCTTACTC +
Preference number: 4 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCKVFLG*SSPPLL
Trigger: GAGTAAGGGAGGACTTGATCATCCAAGAAATACTTT...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR GCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAATAAATTCTACTGCCTaGTGCTCCAGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITINSTA*CSRSKG
Trigger: CCCCTTGGATCTGGAGCAGCAGGCAGTAGAATTTAT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGTTCACAGGCTTCTCTaGAATCTTTACGGACACCTC +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITVHRLL*NLYGHL
Trigger: GAGGTGTCCGTAAAGATTCCAGAGAAGCCTGTGAAC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTTCCAACAGGCAAACTaGAGCCACTGGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLFQQAN*SHWWLG
Trigger: GCCGAGCCACCAGTGGCTCCAGTTTGCCTGTTGGAA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACATCAGTCTCAGTAGCATaGACCAGTAAGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSVSVA*TSKMSP
Trigger: TGGGGACATCTTACTGGTCCATGCTACTGAGACTGA...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATGCCTGTGCTACAGATaGGGACTCCTGCGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPCLCYR*GLLRVS
Trigger: TGAGACTCGCAGGAGTCCCCATCTGTAGCACAGGCA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTAGGCAGACAGAGCTGTaGACAGCACCCGACCACAGA +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLRQTEL*TAPDHR
Trigger: TCTGTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCT...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGATGTGCTCGTTCTGTaGCGTCTGGTAGAACATAGA +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASDVLVL*RLVEHR
Trigger: TCTATGTTCTACCAGACGCCACAGAACGAGCACATC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTCAGCCAGGTaGTCACTGAAGTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPASSAR*SLKSLK
Trigger: CTTCAATGACTTCAGTGACCACCTGGCTGAGGAGGC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAAGCATTCAACAGAGCTaGGCAAGGGAAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPSIQQS*AREGER
Trigger: TCTCTCCCCTTCCCTTGCCCAGCTCTGTTGAATGCT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTTAGACAAGCTTCTCTaGGAGCAGGCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASLDKLL*EQALSS
Trigger: AGATGAAAGTGCCTGCTCCCAGAGAAGCTTGTCTAA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372189.7
CDS-3UTR CCA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGACATAATTTCGTTGTaGTCAATGAGGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: PAIKSISWMIKSSLTPASDIISL*SMRDSS
Trigger: CGAGCTGTCCCTCATTGACCACAACGAAATTATGTC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCACTTGATGAGCTCCTCTaGGGAGATGAAGGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPLDELL*GDEGPV
Trigger: TACAGGACCTTCATCTCCCCAGAGGAGCTCATCAAG...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTTTCGTTGTGGTCAATaGGGGACAGCTCGTCCACTT +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLFRCGQ*GTARPL
Trigger: AAGTGGACGAGCTGTCCCTCATTGACCACAACGAAA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATGGCCAAGTAGGAGTTaGAGTTATTCAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPWPSRS*SYSASA
Trigger: TGCGGAAGCTGAATAACTTCAACTCCTACTTGGCCA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTCTCTTGATTTTGGGTaGGTGGAATTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLSLDFG*VEFVHQ
Trigger: CTGATGGACAAATTCCACTCACCCAAAATCAAGAGA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR TCA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCTGTTCAAAAACCCATaGAGGACTCAAAGTGACATG +
Preference number: 4 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLLFKNP*RTQSDM
Trigger: CATGTCACTTTGAGTCCTTCATGGGTTTTTGAACAG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS GCA 90 bp AACGCTGAGAGTCTGCTTTCTCGATCTTGCCGGACATTTCCGGGCTaGGCCGGAGGCCGAGGCCGCCGCTCATCGGGCCCGGGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: NAESLLSRSCRTFPG*AGGRGRRSSGPGRA
Trigger: GGCCCGGCCCGGGCCCGATGAGCGGCGGCCTCGGCCTCCGGCGCAGCCCGGAAATGTCCGGCAAGATCGAGAAAGCAGACTCTCAGCGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372195.5
ENST00000438647.3
ENST00000683357.1
CDS-3UTR CAA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAATGGCCTCCAGCACCTaGCTGGCTGACCCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAMASST*LADPGS
Trigger: GCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCAT...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS CCA 90 bp GCGCTTCTTCTCGGGGAGAGCAGGTGGCGTATCTGTCTGCTGCCCTaGGGCCAGAGGTCCGTCTGGCTGGGGATGGCCGCCAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ALLLGESRWRICLLP*GQRSVWLGMAAKRQ
Trigger: CTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACCTGCTCTCCCCGAGAAGAAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGAGCATCTGGTGACTTaGGGGCCCTCTCACTGCCGT +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAEHLVT*GPSHCR
Trigger: ACGGCAGTGAGAGGGCCCCAAAGTCACCAGATGCTC...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp GGGCCCTCTCACTGCCGTCTCTGCTGTCCTTCCCAGGGACGCCGCTaGCCGCTGAGGGATCTCTGGGATGTCCGTCTTTCCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GPSHCRLCCPSQGRR*PLRDLWDVRLSQPV
Trigger: CACCGGCTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAGAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS GCA 90 bp CTCGTAGGACACCCTGCAGCCAGAGCCGTCCGCCGTCTGGGAGGCTaGGCTCCTGCGCTTCTTCTCGGGGAGAGCAGGTGGCGTATCTGT +
Preference number: 5 (lower is better)
Translates to: LVGHPAARAVRRLGG*APALLLGESRWRIC
Trigger: ACAGATACGCCACCTGCTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCCTCCCAGACGGCGGACGGCTCTGGCTGCAGGGTGTCCTACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 90 bp AGCAGGTGGCGTATCTGTCTGCTGCCCTGGGGCCAGAGGTCCGTCTaGCTGGGGATGGCCGCCAAGAGGCAGCTGGAAAGGAGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SRWRICLLPWGQRSV*LGMAAKRQLERRAK
Trigger: CTTGGCCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCATCTGACTTGCTGAGCTaGCCTATGCTGCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SRSALPAGSCWRPRNQAASDLLS*PMLLQG
Trigger: CCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGA...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTCTGACTTGCTGAGCTaGCCTATGCTGCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASDLLS*PMLLQG
Trigger: CCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp CTCACTGCCGTCTCTGCTGTCCTTCCCAGGGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCCGTCTTTCCCAGCCGGTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LTAVSAVLPRDAADR*GISGMSVFPSRWLQ
Trigger: CTGGAGCCACCGGCTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp CTCACTGCCGTCTCTGCTGTCCTTCCCAGGGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCCGTCTTTCCCAGCCGGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LTAVSAVLPRDAADR*GISGMSVFPSRWLS
Trigger: GGAGAGCCACCGGCTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGAAGGACAGCAGAGACGGCAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414781.1
ENST00000683357.1
CDS CCA 90 bp AAGCCGAGAGAGGCCCGTCCACGGTGCTGGGAGGTGGACCGGCCATaGTTGGCACGGCTAAGTCAGAGCTCTGAGACTGGTGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KPREARPRCWEVDRP*LARLSQSSETGGQV
Trigger: CACCTGCCCACCAGTCTCAGAGCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTCCTCCCCAGAGATGTaGTCATACTGCGAGGGATGC +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASSPEM*SYCEGC
Trigger: GCATCCCTCGCAGTATGACAACATCTCTGGGGAGGA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCAGGCTCAGCTCCCCATaGCACACCAGGCGGAAGACC +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCARLSSP*HTRRKT
Trigger: GGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCT...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp GCCCACTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTGACTTGCTaGGCTTGCCTATGCTGCTGCAGGGGGAGAGGCGGGGCGACTCTC +
Preference number: 5 (lower is better)
Translates to: AHCPCPERTAARLTC*ACLCCCRGRGGATL
Trigger: GAGAGTCGCCCCGCCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 90 bp GGAGCACTGCCCACTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTaGCTTGCTGAGCTTGCCTATGCTGCTGCAGGGGGAGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GALPTVPVQRGQLLV*LAELAYAAAGGEAG
Trigger: CCCCGCCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGGCAGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 90 bp GCAGGGGAACTGGGCTTCACGGGGCTCGTCGGAGACGGACGTCCCTaGTTCTCGATGGTGAGCCTGACCAGCTCCTTCACTCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: AGELGFTGLVGDGRP*FSMVSLTSSFTPSS
Trigger: GCTGGATGGAGTGAAGGAGCTGGTCAGGCTCACCATCGAGAAGCAGGGACGTCCGTCTCCGACGAGCCCCGTGAAGCCCAGTTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 90 bp AGTACTCGGCCAGGCCCTCTGAAGTCTGCTTCTGCCACTCCAGCCTaGGGATGGGCGCCGAGTCCAGGGCAGAGAGGATGGCCAAGTAGG +
Preference number: 5 (lower is better)
Translates to: STRPGPLKSASATPA*GWAPSPGQRGWPSR
Trigger: CCTACTTGGCCATCCTCTCTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 90 bp TCGATCAGTGTGCAGTACTCGGCCAGGCCCTCTGAAGTCTGCTTCTaGCACTCCAGCCTGCGGATGGGCGCCGAGTCCAGGGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SISVQYSARPSEVCF*HSSLRMGAESRAER
Trigger: CCTCTCTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAGTACTGCACACTGATCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 90 bp GGTGGCGTATCTGTCTGCTGCCCTGGGGCCAGAGGTCCGTCTGGCTaGGGATGGCCGCCAAGAGGCAGCTGGAAAGGAGGGCCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GGVSVCCPGARGPSG*GWPPRGSWKGGPRN
Trigger: ATTTCTTGGCCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCATGGCCTCCAGCACCTaGCTGGCTGACCCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPMASST*LADPGS
Trigger: GCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCAT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCAGTCGTCACCATCTCCTaGTCTTCTGAGTTCACGCCT +
Preference number: 5 (lower is better)
Translates to: SRSALPAGSCWRPRNQAAVVTIS*SSEFTP
Trigger: AGGCGTGAACTCAGAAGACAAGGAGATGGTGACGAC...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGAGCATCTGGTGACTTaGGGGCCCTCTCACTGCCGT +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAEHLVT*GPSHCR
Trigger: ACGGCAGTGAGAGGGCCCCAAAGTCACCAGATGCTC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGGCATTGCTGACGCGCTTCTaGAATGTGTCGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SRSALPAGSCWRPRNQAALLTRF*NVSAKG
Trigger: TCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAA...TGCCGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCTGATGGCGCCAGTACCGCGGGGCAGAGCACCAGCTGCGGGGCTGCTAAGGCGAGCTCTGGCCTCAGTTaGGTGAGGTTCAGAAGACTC +
Preference number: 5 (lower is better)
Translates to: PDGASTAGQSTSCGAAKASSGLS*VRFRRL
Trigger: GAGTCTTCTGAACCTCACCAAACTGAGGCCAGAGCT...CGCCTTAGCAGCCCCGCAGCTGGTGCTCTGCCCCGCGGTACTGGCGCCATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGCTCTGGCCTCAGTTaGGTGAGGTTCAGAAGACTC +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQASSGLS*VRFRRL
Trigger: GAGTCTTCTGAACCTCACCAAACTGAGGCCAGAGCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGACATACATCGCACCTaGCCGTCCTCACGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCADIHRT*PSSRRE
Trigger: CTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGTC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS GCA 90 bp CATGAAAGCTGCTCTCCTGAGAAGCCGAGAGAGGCCCGTCCACGGTaGTGGGAGGTGGACCGGCCATGGTTGGCACGGCTAAGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: HESCSPEKPREARPR*WEVDRPWLARLSQS
Trigger: GCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGGCTTCTCAGGAGAGCAGCTTTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CCA 90 bp GTATCTGTCTGCTGCCCTGGGGCCAGAGGTCCGTCTGGCTGGGGATaGCCGCCAAGAGGCAGCTGGAAAGGAGGGCCAAGAAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: VSVCCPGARGPSGWG*PPRGSWKGGPRNGD
Trigger: GTCTCCATTTCTTGGCCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CCA 90 bp GCTGCCAGGGGCTGGCTGGAGGTGGCACACCTGAGTAGCTTCTTCTaGTCCACCTTGTCCAGGATGTTCTTCCGGAGCACACGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AARGWLEVAHLSSFF*STLSRMFFRSTRAR
Trigger: CCTGGCCCGTGTGCTCCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAAGCTACTCAGGTGTGCCACCTCCAGCCAGCCCCTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 90 bp GAAAGCTGCTCTCCTGAGAAGCCGAGAGAGGCCCGTCCACGGTGCTaGGAGGTGGACCGGCCATGGTTGGCACGGCTAAGTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: ESCSPEKPREARPRC*EVDRPWLARLSQSS
Trigger: AGAGCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGGCTTCTCAGGAGAGCAGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCCTGGGAGGAGCTCAGTaGACTGTGACATCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVLGGAQ*TVTSQS
Trigger: CGACTGGGATGTCACAGTCAACTGAGCTCCTCCCAG...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGAGGCTCAGCTCCCCATaGCACACCAGGCGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGRLSSP*HTRRKT
Trigger: GGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCAGCGCCCCACAAGCCTaGCCCAGATTGTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCASAPQA*PRLSSS
Trigger: TGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCT...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCC +
Preference number: 5 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSQGRFC*SSAPQA
Trigger: GGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTG...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGAGAACGCTGAGAGTCTaGTTTCCAGGGGTACAGATG +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQARTLRV*FPGVQM
Trigger: CATCTGTACCCCTGGAAACAAGACTCTCAGCGTTCT...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372190.7
CDS TCA 90 bp CCGTGCCGGCTGAGAAAGGAGTTAGAGACGGACACACTGAGGCCCTaGGCGGCACTGCCGTCCTCGGGGGTGAAGGCCACTTTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PCRLRKELETDTLRP*AALPSSGVKATLVC
Trigger: GCAAACTAAAGTGGCCTTCACCCCCGAGGACGGCAGTGCCGCTCAGGGCCTCAGTGTGTCCGTCTCTAACTCCTTTCTCAGCCGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS GCA 90 bp GTGTTCCGGGAGCACTGCCCACTGTCCCTGTCCAGAGAGGACAGCTaGTCGTCTGACTTGCTGAGCTTGCCTATGCTGCTGCAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: VFREHCPLSLSREDS*SSDLLSLPMLLQGE
Trigger: CTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGGCAGTGCTCCCGGAACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGAGGTTGGCGAGGCTTaGGTACACTCGGCTATAGCA +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAEVGEA*VHSAIA
Trigger: TGCTATAGCCGAGTGTACCAAAGCCTCGCCAACCTC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGAGGTTGGCGAGGCTTaGGTACACTCGGCTATAGCA +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVEVGEA*VHSAIA
Trigger: TGCTATAGCCGAGTGTACCAAAGCCTCGCCAACCTC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTGCCTTCCAGCATCACTaGGTCAGACCAGCGAATGAG +
Preference number: 5 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSAFQHH*VRPANE
Trigger: CTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGC...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTCATCACCCTCCTGCTaGAGCGTCAGCCTGGACATA +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVSSPSC*SVSLDI
Trigger: TATGTCCAGGCTGACGCTCAAGCAGGAGGGTGATGA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTAACTGCTGCCACCGCTaGGAGAAGTTCACTTTCCCG +
Preference number: 5 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSNCCHR*EKFTFP
Trigger: CGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTT...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCATGCTGTCGAGGATGTaGAACTGCTGCCACCGCTTG +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVMLSRM*NCCHRL
Trigger: CAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCAT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCC +
Preference number: 5 (lower is better)
Translates to: PESTLHSAHPAACPHSRAQGRFC*SSAPQA
Trigger: GGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCAGCATGGCACTGGCATaGCCTGTGCTACAGATGGGG +
Preference number: 5 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPSMALA*PVLQMG
Trigger: CCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCT...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS CCA 90 bp GTGGAGGACTATTATCAACCACCCGAATGCCAGGCAGAGGAGGCTTaGGGGGCGCGACCTCTTCATCCGTGGCATCTGGGAGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: VEDYYQPPECQAEEA*GARPLHPWHLGGAQ
Trigger: CTGAGCTCCTCCCAGATGCCACGGATGAAGAGGTCGCGCCCCCCAAGCCTCCTCTGCCTGGCATTCGGGTGGTTGATAATAGTCCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCAGGTTCTTCTGCCTTaGAGACCTGGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: PESTLHSAHPAACPHSRAQVLLP*RPGSHS
Trigger: GCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCTG...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CACGGCCAGGCCGCAGCACTGAGCACAGAGCTCAGCAATAACCAGGGCCAGGCTGACCAGCGAATGAGGTaGGCGAGGCTTTGGTACACT +
Preference number: 5 (lower is better)
Translates to: HGQAAALSTELSNNQGQADQRMR*ARLWYT
Trigger: AGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTC...AGCCTGGCCCTGGTTATTGCTGAGCTCTGTGCTCAGTGCTGCGGCCTGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCCAGAATCGGGGTCGTCACCATCTCCTaGTCTTCTGAGTTCACGCCT +
Preference number: 5 (lower is better)
Translates to: VTLWRSWGRSGKMLPRIGVVTIS*SSEFTP
Trigger: AGGCGTGAACTCAGAAGACAAGGAGATGGTGACGAC...CCCGATTCTGGGGAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTAGTGTTTCACAGCTaGTGTTCCGGGAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLVFHS*CSGSTA
Trigger: GGCAGTGCTCCCGGAACACAAGCTGTGAAACACTAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTGTACTGCAGCTTCTaGATGAGCTCCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLYCSF*MSSSGE
Trigger: CTCCCCAGAGGAGCTCATCAAGAAGCTGCAGTACAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAGGCTCAGCTCCCCATaGCACACCAGGCGGAAGACC +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGRLSSP*HTRRKT
Trigger: GGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCTTCTTCTGGTCCACCTaGTCCAGGATGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVFFWST*SRMFFR
Trigger: CCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAA...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS GCA 90 bp CCAGGATGTTCTTCCGGAGCACACGGGCCAGGCTCAGCTCCCCATTaGACACCAGGCGGAAGACCAGTTCCATCAGCAGCTTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: PGCSSGAHGPGSAPH*TPGGRPVPSAASGS
Trigger: AGATCCTGAAGCTGCTGATGGAACTGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCTGGCCCGTGTGCTCCGGAAGAACATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 90 bp CTGGGGATGGCCGCCAAGAGGCAGCTGGAAAGGAGGGCCAAGAAATaGAGACCCAGACTCCCCCAAAGACTCTGGCAACGGGCTAAGGTT +
Preference number: 5 (lower is better)
Translates to: LGMAAKRQLERRAKK*RPRLPQRLWQRAKV
Trigger: AACCTTAGCCCGTTGCCAGAGTCTTTGGGGGAGTCTGGGTCTCCATTTCTTGGCCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CCA 90 bp CCAGCCGGTGGCTCTCCTCGAGAGGGAGCCAGCTCCTCGCTGCTCTaGCCAGAGGAATACAGATTGACATATTCACCCTCACCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PAGGSPREGASSSLL*PEEYRLTYSPSPAS
Trigger: GGAAGCTGGTGAGGGTGAATATGTCAATCTGTATTCCTCTGGCCAGAGCAGCGAGGAGCTGGCTCCCTCTCGAGGAGAGCCACCGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414781.1
ENST00000683357.1
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCAGGTTCTTCTGCCTTaGAGACCTGGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGQVLLP*RPGSHS
Trigger: GCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCTG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCAGACCAGCGAATGAGGTaGGCGAGGCTTTGGTACACT +
Preference number: 5 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPDQRMR*ARLWYT
Trigger: AGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTC...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGTCATCACCCTCCTGCTaGAGCGTCAGCCTGGACATA +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGSSPSC*SVSLDI
Trigger: TATGTCCAGGCTGACGCTCAAGCAGGAGGGTGATGA...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCTTCTTCTGGTCCACCTaGTCCAGGATGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PESTLHSAHPAACPHSRAFFWST*SRMFFR
Trigger: CCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAA...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGATGCTGTCGAGGATGTaGAACTGCTGCCACCGCTTG +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGMLSRM*NCCHRL
Trigger: CAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCAT...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp TCGTTGTGGTCAATGAGGGACAGCTCGTCCACTTCCTCCTCCGACTaGGCCGACTCCAGAGCATCTGGTGACTTTGGGGCCCTCTCACTG +
Preference number: 5 (lower is better)
Translates to: SLWSMRDSSSTSSSD*ADSRASGDFGALSL
Trigger: CAGTGAGAGGGCCCCAAAGTCACCAGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAAGTGGACGAGCTGTCCCTCATTGACCACAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGGCGTTCTCTTGATTTaGGGTGAGTGGAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVGVLLI*GEWNLS
Trigger: GGACAAATTCCACTCACCCAAAATCAAGAGAACGCC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCGACCAGCGAATGAGGTaGGCGAGGCTTTGGTACACT +
Preference number: 5 (lower is better)
Translates to: EGEHPPLPWSADEVSAALDQRMR*ARLWYT
Trigger: AGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTC...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGAGCATCTGGTGACTTaGGGGCCCTCTCACTGCCGT +
Preference number: 5 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPEHLVT*GPSHCR
Trigger: ACGGCAGTGAGAGGGCCCCAAAGTCACCAGATGCTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTTGCTGACGCGCTTCTaGAATGTGTCGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLLLTRF*NVSAKG
Trigger: TCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCACGAAGAACGTGTTCTaGCTGACGCGCTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVTKNVF*LTRFLN
Trigger: ATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGT...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: EGEHPPLPWSADEVSAALQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAGCGCCCCACAAGCCTaGCCCAGATTGTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGSAPQA*PRLSSS
Trigger: TGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS CCA 90 bp CTGCTGCCACCGCTTGGAGAAGTTCACTTTCCCGTCGATGTAGTCTaGGTTTCCCAGGTGAACGAAGGTCAGGTCCTGCAGGATCAGCCC +
Preference number: 5 (lower is better)
Translates to: LLPPLGEVHFPVDVV*VSQVNEGQVLQDQP
Trigger: GGGCTGATCCTGCAGGACCTGACCTTCGTTCACCTGGGAAACCCAGACTACATCGACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS-3UTR CAA 90 bp GCCTCATGGCTCCGAGGCCGGGACTCCTGCCATGCGCCTAACAGGTCCAAGGTCGTAGAAATCTGTCTGTaGCCTCTTTGTTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: ASWLRGRDSCHAPNRSKVVEICL*PLCSQA
Trigger: AGCCTGTGAACAAAGAGGCAACAGACAGATTTCTAC...GACCTTGGACCTGTTAGGCGCATGGCAGGAGTCCCGGCCTCGGAGCCATGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCCAGGTTCTTCTGCCTTaGAGACCTGGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGQVLLP*RPGSHS
Trigger: GCTGTGGCTTCCAGGTCTCAAAGGCAGAAGAACCTG...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGCCTTCCAGCATCACTaGGTCAGACCAGCGAATGAG +
Preference number: 5 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHAFQHH*VRPANE
Trigger: CTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACTCCTCCCCAGAGATGTaGTCATACTGCGAGGGATGC +
Preference number: 5 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHSSPEM*SYCEGC
Trigger: GCATCCCTCGCAGTATGACAACATCTCTGGGGAGGA...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AATAAAGTGACAGGTCCCGGCTGGCCCCGCAAGACCACCGCAAGAGGGGGTCCCCTGGACATAATTTCGTaGTGGTCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: NKVTGPGWPRKTTARGGPLDIIS*WSMRDS
Trigger: GCTGTCCCTCATTGACCACAACGAAATTATGTCCAG...GGGACCCCCTCTTGCGGTGGTCTTGCGGGGCCAGCCGGGACCTGTCACTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTTCCCGCAGCGCCCTGCCTGCAGGCTCATGCTGGAGGCCACGGAACCAGGCGTGGTCACTGAAGTCATaGAAGAAGTTTATAATGTCG +
Preference number: 5 (lower is better)
Translates to: GSRSALPAGSCWRPRNQAWSLKS*KKFIMS
Trigger: CGACATTATAAACTTCTTCAATGACTTCAGTGACCA...CGCCTGGTTCCGTGGCCTCCAGCATGAGCCTGCAGGCAGGGCGCTGCGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACAGGGCAGATTCTGTTaGTCAAGCGCCCCACAAGCC +
Preference number: 5 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPQGRFC*SSAPQA
Trigger: GGCTTGTGGGGCGCTTGACAAACAGAATCTGCCCTG...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGACATACATCGCACCTaGCCGTCCTCACGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTDIHRT*PSSRRE
Trigger: CTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGTC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTGGGGGCGTTCTCTTGATTTaGGGTGAGTGGAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: PGQVSTHSCTADPEAWAGGVLLI*GEWNLS
Trigger: GGACAAATTCCACTCACCCAAAATCAAGAGAACGCC...CCCAGCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCTGGGAGGAGCTCAGTaGACTGTGACATCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTLGGAQ*TVTSQS
Trigger: CGACTGGGATGTCACAGTCAACTGAGCTCCTCCCAG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTTCAAAATCCTGCCTATaGATTCCAACAGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: GPRSSPVWELPSAPLEHSSKSCL*IPTGKL
Trigger: CAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTGA...AGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCCCTGTGCGTTAGAGAGGTCTaGCTGGAGGAATTCATAGTC +
Preference number: 5 (lower is better)
Translates to: SLLCILPTQLLAPIPGPLCVREV*LEEFIV
Trigger: GACTATGAATTCCTCCAGCAAGACCTCTCTAACGCA...CAGGGGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCACCTCATTCTGCTCTTTaGCCCAAAGCAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPPHSAL*PKAKPQ
Trigger: CTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAGG...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAGCTCTGGCCTCAGTTaGGTGAGGTTCAGAAGACTC +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGSSGLS*VRFRRL
Trigger: GAGTCTTCTGAACCTCACCAAACTGAGGCCAGAGCT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCATCTGCTTTCTCGATCTaGCCGGACATTTCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPSAFSI*PDISGL
Trigger: CAGCCCGGAAATGTCCGGCAAGATCGAGAAAGCAGA...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372195.5
CDS TCA 90 bp TCCCCCAAAGACTCTGGCAACGGGCTAAGGTTCCAGGCCGTCTGCTaGGGTATCTGGTCTGCGTTAGAGAGGTCTTGCTGGAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: SPKDSGNGLRFQAVC*GIWSALERSCWRNS
Trigger: TGAATTCCTCCAGCAAGACCTCTCTAACGCAGACCAGATACCTCAGCAGACGGCCTGGAACCTTAGCCCGTTGCCAGAGTCTTTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 90 bp TGTCATAGTGCGCCTGCTGGAAGCAGCGCATGCTGTCGAGGATGTTaGACTGCTGCCACCGCTTGGAGAAGTTCACTTTCCCGTCGATGT +
Preference number: 5 (lower is better)
Translates to: CHSAPAGSSACCRGC*TAATAWRSSLSRRC
Trigger: ACATCGACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCATGCGCTGCTTCCAGCAGGCGCACTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS TCA 90 bp GAGAGGGAGCCAGCTCCTCGCTGCTCTGGCCAGAGGAATACAGATTaGCATATTCACCCTCACCAGCTTCCTCACTGGCGTTTTCACTCG +
Preference number: 5 (lower is better)
Translates to: EREPAPRCSGQRNTD*HIHPHQLPHWRFHS
Trigger: CGAGTGAAAACGCCAGTGAGGAAGCTGGTGAGGGTGAATATGTCAATCTGTATTCCTCTGGCCAGAGCAGCGAGGAGCTGGCTCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683357.1
CDS CCA 90 bp CTCCATGAGGAGCTTGTTCTTCTGCTGGTAGATGTGCTCGTTCTGTaGCGTCTGGTAGAACATAGAGGGCTGCGGCTCCGAGTAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LHEELVLLLVDVLVL*RLVEHRGLRLRVVL
Trigger: GAGGACTACTCGGAGCCGCAGCCCTCTATGTTCTACCAGACGCCACAGAACGAGCACATCTACCAGCAGAAGAACAAGCTCCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000419442.1
ENST00000683357.1
CDS-3UTR CAA 90 bp CATGCGCCTAACAGGTCCAAGGTCCTCTCCGGTCTGGGAGCTGCCCTCTGCGCCGTACCTTCTTATCAATaGCCATTTTGTCCACAATGG +
Preference number: 5 (lower is better)
Translates to: HAPNRSKVLSGLGAALCAVPSYQ*PFCPQW
Trigger: CCATTGTGGACAAAATGGCAATTGATAAGAAGGTAC...GGCGCAGAGGGCAGCTCCCAGACCGGAGAGGACCTTGGACCTGTTAGGCGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCTAGTGTTTCACAGCTaGTGTTCCGGGAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTLVFHS*CSGSTA
Trigger: GGCAGTGCTCCCGGAACACAAGCTGTGAAACACTAG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCTGCGTTAGAGAGGTCTaGCTGGAGGAATTCATAGTC +
Preference number: 5 (lower is better)
Translates to: EGEHPPLPWSADEVSAALCVREV*LEEFIV
Trigger: GACTATGAATTCCTCCAGCAAGACCTCTCTAACGCA...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCTGTACTGCAGCTTCTaGATGAGCTCCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTLYCSF*MSSSGE
Trigger: CTCCCCAGAGGAGCTCATCAAGAAGCTGCAGTACAG...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GAGGGGGAGCACCCACCACTTCCTTGGTCTGCTGATGAGGTCTCTGCTGCTCTCCCTCATTCTGCTCTTTaGCCCAAAGCAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: EGEHPPLPWSADEVSAALPHSAL*PKAKPQ
Trigger: CTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAGG...GAGAGCAGCAGAGACCTCATCAGCAGACCAAGGAAGTGGTGGGTGCTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCCGAGTCTACTCTGCATTCTGCCCACCCAGCTGCTTGCCCCCATTCCAGGGCCAAGTGCTTCATGATCTaGATGAACTTCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PESTLHSAHPAACPHSRAKCFMI*MNFKSS
Trigger: GCTGCTCTTGAAGTTCATCAAGATCATGAAGCACTT...GGCCCTGGAATGGGGGCAAGCAGCTGGGTGGGCAGAATGCAGAGTAGACTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCAACTGCTGCCACCGCTaGGAGAAGTTCACTTTCCCG +
Preference number: 5 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLNCCHR*EKFTFP
Trigger: CGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTT...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCAACTGCTGCCACCGCTaGGAGAAGTTCACTTTCCCG +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTNCCHR*EKFTFP
Trigger: CGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTT...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCATGCTGTCGAGGATGTaGAACTGCTGCCACCGCTTG +
Preference number: 5 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLMLSRM*NCCHRL
Trigger: CAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCAT...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCACGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: SSSSPRTRQTELWTAPDHAARMV*TRRMET
Trigger: TGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGC...GTGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp GAGAGGGAGCCAGCTCCTCGCTGCTCTGGCCAGAGGAATACAGATTaGCATATTCACCCTCACCAGCTTCCTCACTGGCGTTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: EREPAPRCSGQRNTD*HIHPHQLPHWRFHS
Trigger: TGAGTGAAAACGCCAGTGAGGAAGCTGGTGAGGGTGAATATGTCAATCTGTATTCCTCTGGCCAGAGCAGCGAGGAGCTGGCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414781.1
CDS CCA 90 bp GTCACCATCTCCTTGTCTTCTGAGTTCACGCCTTCCAGCATCACTTaGTCAGACCAGCGAATGAGGTTGGCGAGGCTTTGGTACACTCGG +
Preference number: 5 (lower is better)
Translates to: VTISLSSEFTPSSIT*SDQRMRLARLWYTR
Trigger: CCGAGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCGTCGTCACCATCTCCTaGTCTTCTGAGTTCACGCCT +
Preference number: 5 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLVVTIS*SSEFTP
Trigger: AGGCGTGAACTCAGAAGACAAGGAGATGGTGACGAC...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCCGACCAGACATCCCAGTCGTCTaGTTTAGGATCTCTACCTCG +
Preference number: 5 (lower is better)
Translates to: IQLKPKNKADRAVDSTRPDIPVV*FRISTS
Trigger: CGAGGTAGAGATCCTAAACAAGACGACTGGGATGTC...TGGTCGGGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCTGGGAGGAGCTCAGTaGACTGTGACATCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: LHSFEISEDSGTLELREGLGGAQ*TVTSQS
Trigger: CGACTGGGATGTCACAGTCAACTGAGCTCCTCCCAG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GCGAGCGATGGAGGAGGGAGGTGCTGGCCTCTCCCCTCTGAATTAACTCCCCCATCAAAATCCTGCCTATaGATTCCAACAGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: ASDGGGRCWPLPSELTPPSKSCL*IPTGKL
Trigger: CAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTGA...TGGGGGAGTTAATTCAGAGGGGAGAGGCCAGCACCTCCCTCCTCCATCGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCTCATCACCCTCCTGCTaGAGCGTCAGCCTGGACATA +
Preference number: 5 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLSSPSC*SVSLDI
Trigger: TATGTCCAGGCTGACGCTCAAGCAGGAGGGTGATGA...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCACGAAGAACGTGTTCTaGCTGACGCGCTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGTKNVF*LTRFLN
Trigger: ATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS TCA 90 bp CTTCTGAGTTCACGCCTTCCAGCATCACTTGGTCAGACCAGCGAATaGGGTTGGCGAGGCTTTGGTACACTCGGCTATAGCAGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LLSSRLPASLGQTSE*GWRGFGTLGYSRKR
Trigger: TCTCTTCCTGCTATAGCCGAGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGCGTGAACTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 90 bp AGCCTTGATGACCCCCTTCACAGTCGTCACCATCTCCTTGTCTTCTaGGTTCACGCCTTCCAGCATCACTTGGTCAGACCAGCGAATGAG +
Preference number: 5 (lower is better)
Translates to: SLDDPLHSRHHLLVF*VHAFQHHLVRPANE
Trigger: CTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATGGTGACGACTGTGAAGGGGGTCATCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 90 bp TGGCAACGGGCTAAGGTTCCAGGCCGTCTGCTGAGGTATCTGGTCTaGGTTAGAGAGGTCTTGCTGGAGGAATTCATAGTCGGGATCATA +
Preference number: 5 (lower is better)
Translates to: WQRAKVPGRLLRYLV*VREVLLEEFIVGII
Trigger: TATGATCCCGACTATGAATTCCTCCAGCAAGACCTCTCTAACGCAGACCAGATACCTCAGCAGACGGCCTGGAACCTTAGCCCGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS-3UTR CAA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGGAGGTTGGCGAGGCTTaGGTACACTCGGCTATAGCA +
Preference number: 5 (lower is better)
Translates to: LHSFEISEDSGTLELREGEVGEA*VHSAIA
Trigger: TGCTATAGCCGAGTGTACCAAAGCCTCGCCAACCTC...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGACATCCCAGTCGTCTaGTTTAGGATCTCTACCTCG +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTDIPVV*FRISTS
Trigger: CGAGGTAGAGATCCTAAACAAGACGACTGGGATGTC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCCTGTACTGCAGCTTCTaGATGAGCTCCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCLYCSF*MSSSGE
Trigger: CTCCCCAGAGGAGCTCATCAAGAAGCTGCAGTACAG...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCCACCGGTTTGTAAATaGGCAACAAGACCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLPPVCK*ATRPAC
Trigger: GCAGGCAGGTCTTGTTGCCAATTTACAAACCGGTGG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCAAGCCTTGCCCAGATaGTCAAGCTCAGCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: LHSFEISEDSGTLELREGQALPR*SSSAAR
Trigger: TCTCGCTGCTGAGCTTGACAATCTGGGCAAGGCTTG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ACCTCTATCCAGCTCAAGCCCAAGAACAAGGCAGACAGAGCTGTGGACAGCACCGGCGTTCTCTTGATTTaGGGTGAGTGGAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: TSIQLKPKNKADRAVDSTGVLLI*GEWNLS
Trigger: GGACAAATTCCACTCACCCAAAATCAAGAGAACGCC...GGTGCTGTCCACAGCTCTGTCTGCCTTGTTCTTGGGCTTGAGCTGGATAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCTCAAAATCCTGCCTATaGATTCCAACAGGCAAACTG +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGSKSCL*IPTGKL
Trigger: CAGTTTGCCTGTTGGAATCAATAGGCAGGATTTTGA...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp GGGCAGATTCTGTTTGTCAAGCGCCCCACAAGCCTTGCCCAGATTGTCAAGCTCCTGGACATAATTTCGTaGTGGTCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GQILFVKRPTSLAQIVKLLDIIS*WSMRDS
Trigger: GCTGTCCCTCATTGACCACAACGAAATTATGTCCAG...GAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCTTGACAAACAGAATCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AAACCCGGGACAAGTGAGCACTCATTCATGCACAGCAGACCCGGAGGCATGGGCAAGTGCTTCATGATCTaGATGAACTTCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: KPGTSEHSFMHSRPGGMGKCFMI*MNFKSS
Trigger: GCTGCTCTTGAAGTTCATCAAGATCATGAAGCACTT...GCCCATGCCTCCGGGTCTGCTGTGCATGAATGAGTGCTCACTTGTCCCGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp ATATATTACAATGTAACCCTGTGGAGGTCGTGGGGCCGGAGCGGGAAGATGCTCCTGGACATAATTTCGTaGTGGTCAATGAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: IYYNVTLWRSWGRSGKMLLDIIS*WSMRDS
Trigger: GCTGTCCCTCATTGACCACAACGAAATTATGTCCAG...GAGCATCTTCCCGCTCCGGCCCCACGACCTCCACAGGGTTACATTGTAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCAARMV*TRRMET
Trigger: TGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGC...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAAGCATGGCACTGGCATaGCCTGTGCTACAGATGGGG +
Preference number: 5 (lower is better)
Translates to: CLQEDATIRQVSWGIYITSMALA*PVLQMG
Trigger: CCCCATCTGTAGCACAGGCAATGCCAGTGCCATGCT...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGACATACATCGCACCTaGCCGTCCTCACGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PAIKSISWMIKSSLTPASDIHRT*PSSRRE
Trigger: CTCCCTGCGTGAGGACGGCAAGGTGCGATGTATGTC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CTCCACTCATTTGAGATTTCAGAAGATTCAGGGACCCTGGAGCTTAGGGAGGGGCCTCATTCTGCTCTTTaGCCCAAAGCAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: LHSFEISEDSGTLELREGPHSAL*PKAKPQ
Trigger: CTGAGGTTTTGCTTTGGGCAAAAGAGCAGAATGAGG...CCCCTCCCTAAGCTCCAGGGTCCCTGAATCTTCTGAAATCTCAAATGAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS CCA 90 bp AGAGAATTTCTCATATCTGTACTGCAGCTTCTTGATGAGCTCCTCTaGGGAGATGAAGGTCCTGTAGGTGGTCAGGAATGCCTCGCAGTA +
Preference number: 5 (lower is better)
Translates to: REFLISVLQLLDELL*GDEGPVGGQECLAV
Trigger: TACTGCGAGGCATTCCTGACCACCTACAGGACCTTCATCTCCCCAGAGGAGCTCATCAAGAAGCTGCAGTACAGATATGAGAAATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAAGCTGCTCGTCTGACTaGCTGAGCTTGCCTATGCTG +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPSCSSD*LSLPML
Trigger: CAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCT...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATCCTCCCCAGAGATGTaGTCATACTGCGAGGGATGC +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPSSPEM*SYCEGC
Trigger: GCATCCCTCGCAGTATGACAACATCTCTGGGGAGGA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTAGCGCCCCACAAGCCTaGCCCAGATTGTCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLSAPQA*PRLSSS
Trigger: TGAGCTTGACAATCTGGGCAAGGCTTGTGGGGCGCT...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGCCTTCCAGCATCACTaGGTCAGACCAGCGAATGAG +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLAFQHH*VRPANE
Trigger: CTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTAGCTGCTCGTCTGACTaGCTGAGCTTGCCTATGCTG +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLSCSSD*LSLPML
Trigger: CAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCT...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTCTAGTGTTTCACAGCTaGTGTTCCGGGAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLLVFHS*CSGSTA
Trigger: GGCAGTGCTCCCGGAACACAAGCTGTGAAACACTAG...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TGCTGTTCACTTGACCACGTCCTAAACCCGGGACAAGTGAGCACTCATTCATGCTGGTCACTGAAGTCATaGAAGAAGTTTATAATGTCG +
Preference number: 5 (lower is better)
Translates to: CCSLDHVLNPGQVSTHSCWSLKS*KKFIMS
Trigger: CGACATTATAAACTTCTTCAATGACTTCAGTGACCA...GCATGAATGAGTGCTCACTTGTCCCGGGTTTAGGACGTGGTCAAGTGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGACATCCCAGTCGTCTaGTTTAGGATCTCTACCTCG +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPDIPVV*FRISTS
Trigger: CGAGGTAGAGATCCTAAACAAGACGACTGGGATGTC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTTCTTCTGGTCCACCTaGTCCAGGATGTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLFFWST*SRMFFR
Trigger: CCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCAGCGAGAATGGTTTaGACGAGGAGGATGGAAACA +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPAARMV*TRRMET
Trigger: TGTTTCCATCCTCCTCGTCAAAACCATTCTCGCTGC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCTTTGATGGCGTTCTCTaGATTTTGGGTGAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: PAIKSISWMIKSSLTPASFDGVL*ILGEWN
Trigger: ATTCCACTCACCCAAAATCAAGAGAACGCCATCAAA...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TGTCTGCAGGAAGATGCCACCATCAGACAGGTTAGCTGGGGCATATATATTACAGTACCTTCTTATCAATaGCCATTTTGTCCACAATGG +
Preference number: 5 (lower is better)
Translates to: CLQEDATIRQVSWGIYITVPSYQ*PFCPQW
Trigger: CCATTGTGGACAAAATGGCAATTGATAAGAAGGTAC...TGTAATATATATGCCCCAGCTAACCTGTCTGATGGTGGCATCTTCCTGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGTAGAAATCTGTCTGTaGCCTCTTTGTTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPVEICL*PLCSQA
Trigger: AGCCTGTGAACAAAGAGGCAACAGACAGATTTCTAC...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp CCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCAGCCTCCGTACCTTCTTATCAATaGCCATTTTGTCCACAATGG +
Preference number: 5 (lower is better)
Translates to: PAIKSISWMIKSSLTPASVPSYQ*PFCPQW
Trigger: CCATTGTGGACAAAATGGCAATTGATAAGAAGGTAC...GGAGGCTGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTGCGTTAGAGAGGTCTaGCTGGAGGAATTCATAGTC +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLCVREV*LEEFIV
Trigger: GACTATGAATTCCTCCAGCAAGACCTCTCTAACGCA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTGTAGAAATCTGTCTGTaGCCTCTTTGTTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLVEICL*PLCSQA
Trigger: AGCCTGTGAACAAAGAGGCAACAGACAGATTTCTAC...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp TTCAGAAGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTTTTGATGGCGTTCTCTaGATTTTGGGTGAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: FRRLPAIKSISWMIKSSLFDGVL*ILGEWN
Trigger: ATTCCACTCACCCAAAATCAAGAGAACGCCATCAAA...AAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS-3UTR CAA 90 bp AGACTCCCAGCAATAAAAAGTATTTCTTGGATGATCAAGTCCTCCCTTACTCCATGGTCACTGAAGTCATaGAAGAAGTTTATAATGTCG +
Preference number: 5 (lower is better)
Translates to: RLPAIKSISWMIKSSLTPWSLKS*KKFIMS
Trigger: CGACATTATAAACTTCTTCAATGACTTCAGTGACCA...TGGAGTAAGGGAGGACTTGATCATCCAAGAAATACTTTTTATTGCTGGGAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
CDS GCA 72 bp CACCCTGCAGCCAGAGCCGTCCGCCGTCTGGGAGGCTaGGCTCCTGCGCTTCTTCTCGGGGAGAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: HPAARAVRRLGG*APALLLGESRW
Trigger: CCACCTGCTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCCTCCCAGACGGCGGACGGCTCTGGCTGCAGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp AGTCTGCTTTCTCGATCTTGCCGGACATTTCCGGGCTaGGCCGGAGGCCGAGGCCGCCGCTCATCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: SLLSRSCRTFPG*AGGRGRRSSGP
Trigger: CGGGCCCGATGAGCGGCGGCCTCGGCCTCCGGCGCAGCCCGGAAATGTCCGGCAAGATCGAGAAAGCAGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372195.5
ENST00000438647.3
ENST00000683357.1
CDS CCA 72 bp TGCTGCCCTGGGGCCAGAGGTCCGTCTGGCTGGGGATaGCCGCCAAGAGGCAGCTGGAAAGGAGGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: CCPGARGPSGWG*PPRGSWKGGPR
Trigger: TCTTGGCCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CCA 72 bp TCTGTCTGCTGCCCTGGGGCCAGAGGTCCGTCTGGCTaGGGATGGCCGCCAAGAGGCAGCTGGAAAGGAGGG +
Preference number: 6 (lower is better)
Translates to: SVCCPGARGPSG*GWPPRGSWKGG
Trigger: CCCTCCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CCA 72 bp GGCTGCGCTCCTGCGCTTCTTCTCGGGGAGAGCAGGTaGCGTATCTGTCTGCTGCCCTGGGGCCAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GCAPALLLGESR*RICLLPWGQRS
Trigger: GGACCTCTGGCCCCAGGGCAGCAGACAGATACGCCACCTGCTCTCCCCGAGAAGAAGCGCAGGAGCGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 90 bp CCGAGAGAGGCCCGTCCACGGTGCTGGGAGGTGGACCGGCCATGGTaGGCACGGCTAAGTCAGAGCTCTGAGACTGGTGGGCAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: PREARPRCWEVDRPW*ARLSQSSETGGQVG
Trigger: TCCCACCTGCCCACCAGTCTCAGAGCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS GCA 72 bp CCAGGCCCTCTGAAGTCTGCTTCTGCCACTCCAGCCTaGGGATGGGCGCCGAGTCCAGGGCAGAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: PGPLKSASATPA*GWAPSPGQRGW
Trigger: CCATCCTCTCTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp GTGCAGTACTCGGCCAGGCCCTCTGAAGTCTGCTTCTaGCACTCCAGCCTGCGGATGGGCGCCGAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VQYSARPSEVCF*HSSLRMGAESR
Trigger: CCTGGACTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAGTACTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp TGCTCTCCTGAGAAGCCGAGAGAGGCCCGTCCACGGTaGTGGGAGGTGGACCGGCCATGGTTGGCACGGCTA +
Preference number: 6 (lower is better)
Translates to: CSPEKPREARPR*WEVDRPWLARL
Trigger: TAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGGCTTCTCAGGAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CCA 72 bp CGTATCTGTCTGCTGCCCTGGGGCCAGAGGTCCGTCTaGCTGGGGATGGCCGCCAAGAGGCAGCTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: RICLLPWGQRSV*LGMAAKRQLER
Trigger: CCTTTCCAGCTGCCTCTTGGCGGCCATCCCCAGCCAGACGGACCTCTGGCCCCAGGGCAGCAGACAGATACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp GCCCGTCCACGGTGCTGGGAGGTGGACCGGCCATGGTaGGCACGGCTAAGTCAGAGCTCTGAGACTGGTGGG +
Preference number: 6 (lower is better)
Translates to: ARPRCWEVDRPW*ARLSQSSETGG
Trigger: CCCACCAGTCTCAGAGCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS TCA 72 bp GTCTCTGCTGTCCTTCCCAGGGACGCCGCTGACCGCTaGGGGATCTCTGGGATGTCCGTCTTTCCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: VSAVLPRDAADR*GISGMSVFPSR
Trigger: CCGGCTGGGAAAGACGGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGAAGGACAGCAGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 72 bp CTGGGAGCTGCCCTCTGCGCCCCTCGAGCATTCTCCTaGATCCCGGCGTCTGCTCCTAGGTCTTCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: LGAALCAPRAFS*IPASAPRSSLP
Trigger: GGGAAGAGAAGACCTAGGAGCAGACGCCGGGATCCAGGAGAATGCTCGAGGGGCGCAGAGGGCAGCTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 72 bp GAGGCCCGTCCACGGTGCTGGGAGGTGGACCGGCCATaGTTGGCACGGCTAAGTCAGAGCTCTGAGACTGGT +
Preference number: 6 (lower is better)
Translates to: EARPRCWEVDRP*LARLSQSSETG
Trigger: ACCAGTCTCAGAGCTCTGACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CCA 72 bp TCTCCTGAGAAGCCGAGAGAGGCCCGTCCACGGTGCTaGGAGGTGGACCGGCCATGGTTGGCACGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: SPEKPREARPRC*EVDRPWLARLS
Trigger: ACTTAGCCGTGCCAACCATGGCCGGTCCACCTCCCAGCACCGTGGACGGGCCTCTCTCGGCTTCTCAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CAA 90 bp CACTGCCCACTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTGACTaGCTGAGCTTGCCTATGCTGCTGCAGGGGGAGAGGCGGGGCGAC +
Preference number: 6 (lower is better)
Translates to: HCPLSLSREDSCSSD*LSLPMLLQGERRGD
Trigger: GTCGCCCCGCCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 72 bp CCCTGTCCAGAGAGGACAGCTGCTCGTCTGACTTGCTaGGCTTGCCTATGCTGCTGCAGGGGGAGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: PCPERTAARLTC*ACLCCCRGRGG
Trigger: CCCGCCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 72 bp CACTGCCGTCTCTGCTGTCCTTCCCAGGGACGCCGCTaGCCGCTGAGGGATCTCTGGGATGTCCGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: HCRLCCPSQGRR*PLRDLWDVRLS
Trigger: GGAAAGACGGACATCCCAGAGATCCCTCAGCGGTCAGCGGCGTCCCTGGGAAGGACAGCAGAGACGGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS GCA 72 bp CTGGGCTTCACGGGGCTCGTCGGAGACGGACGTCCCTaGTTCTCGATGGTGAGCCTGACCAGCTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: LGFTGLVGDGRP*FSMVSLTSSFT
Trigger: AGTGAAGGAGCTGGTCAGGCTCACCATCGAGAAGCAGGGACGTCCGTCTCCGACGAGCCCCGTGAAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp ATCAGTGTGCAGTACTCGGCCAGGCCCTCTGAAGTCTaGTTCTGCCACTCCAGCCTGCGGATGGGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: ISVQYSARPSEV*FCHSSLRMGAE
Trigger: CTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGGGCCTGGCCGAGTACTGCACACTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 72 bp CCTCTGAAGTCTGCTTCTGCCACTCCAGCCTGCGGATaGGCGCCGAGTCCAGGGCAGAGAGGATGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: PLKSASATPACG*APSPGQRGWPS
Trigger: ACTTGGCCATCCTCTCTGCCCTGGACTCGGCGCCCATCCGCAGGCTGGAGTGGCAGAAGCAGACTTCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CAA 90 bp CTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTGACTTGCTGAGCTaGCCTATGCTGCTGCAGGGGGAGAGGCGGGGCGACTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: LSLSREDSCSSDLLS*PMLLQGERRGDSPP
Trigger: TGGTGGAGAGTCGCCCCGCCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 90 bp GGCTGGCTGGAGGTGGCACACCTGAGTAGCTTCTTCTGGTCCACCTaGTCCAGGATGTTCTTCCGGAGCACACGGGCCAGGCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GWLEVAHLSSFFWST*SRMFFRSTRARLSS
Trigger: GGAGCTGAGCCTGGCCCGTGTGCTCCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAAGCTACTCAGGTGTGCCACCTCCAGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS TCA 72 bp CTGAGAAAGGAGTTAGAGACGGACACACTGAGGCCCTaGGCGGCACTGCCGTCCTCGGGGGTGAAGGCCACT +
Preference number: 6 (lower is better)
Translates to: LRKELETDTLRP*AALPSSGVKAT
Trigger: AGTGGCCTTCACCCCCGAGGACGGCAGTGCCGCTCAGGGCCTCAGTGTGTCCGTCTCTAACTCCTTTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS GCA 72 bp TCTTCCGGAGCACACGGGCCAGGCTCAGCTCCCCATTaGACACCAGGCGGAAGACCAGTTCCATCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SSGAHGPGSAPH*TPGGRPVPSAA
Trigger: AGCTGCTGATGGAACTGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCTGGCCCGTGTGCTCCGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp TTCTTCCGGAGCACACGGGCCAGGCTCAGCTCCCCATaGCACACCAGGCGGAAGACCAGTTCCATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FFRSTRARLSSP*HTRRKTSSISS
Trigger: GCTGCTGATGGAACTGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCTGGCCCGTGTGCTCCGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS TCA 72 bp CCCACTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTaGCTTGCTGAGCTTGCCTATGCTGCTGCAGGGGGA +
Preference number: 6 (lower is better)
Translates to: PTVPVQRGQLLV*LAELAYAAAGG
Trigger: TCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 72 bp TTCCTCCTCCGACTGAGCCGACTCCAGAGCATCTGGTaGCTTTGGGGCCCTCTCACTGCCGTCTCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: FLLRLSRLQSIW*LWGPLTAVSAV
Trigger: GACAGCAGAGACGGCAGTGAGAGGGCCCCAAAGTCACCAGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp CTGTCCCTGTCCAGAGAGGACAGCTGCTCGTCTGACTaGCTGAGCTTGCCTATGCTGCTGCAGGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: LSLSREDSCSSD*LSLPMLLQGER
Trigger: CCTCTCCCCCTGCAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 90 bp TCCAGGATGTTCTTCCGGAGCACACGGGCCAGGCTCAGCTCCCCATaGCACACCAGGCGGAAGACCAGTTCCATCAGCAGCTTCAGGATC +
Preference number: 6 (lower is better)
Translates to: SRMFFRSTRARLSSP*HTRRKTSSISSFRI
Trigger: GATCCTGAAGCTGCTGATGGAACTGGTCTTCCGCCTGGTGTGCAATGGGGAGCTGAGCCTGGCCCGTGTGCTCCGGAAGAACATCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS TCA 72 bp TCAATGAGGGACAGCTCGTCCACTTCCTCCTCCGACTaGGCCGACTCCAGAGCATCTGGTGACTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SMRDSSSTSSSD*ADSRASGDFGA
Trigger: GGCCCCAAAGTCACCAGATGCTCTGGAGTCGGCTCAGTCGGAGGAGGAAGTGGACGAGCTGTCCCTCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS GCA 72 bp GAGCACTGCCCACTGTCCCTGTCCAGAGAGGACAGCTaGTCGTCTGACTTGCTGAGCTTGCCTATGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EHCPLSLSREDS*SSDLLSLPMLL
Trigger: CAGCAGCATAGGCAAGCTCAGCAAGTCAGACGAGCAGCTGTCCTCTCTGGACAGGGACAGTGGGCAGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 72 bp GGTAGGCTCGGAAGGAGGACGAGCTGTCGATCAGTGTaGAGTACTCGGCCAGGCCCTCTGAAGTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GRLGRRTSCRSV*STRPGPLKSAS
Trigger: AGAAGCAGACTTCAGAGGGCCTGGCCGAGTACTGCACACTGATCGACAGCTCGTCCTCCTTCCGAGCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 72 bp TATTATCAACCACCCGAATGCCAGGCAGAGGAGGCTTaGGGGGCGCGACCTCTTCATCCGTGGCATCTGGGA +
Preference number: 6 (lower is better)
Translates to: YYQPPECQAEEA*GARPLHPWHLG
Trigger: TCCCAGATGCCACGGATGAAGAGGTCGCGCCCCCCAAGCCTCCTCTGCCTGGCATTCGGGTGGTTGATAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp GAGGTGGCACACCTGAGTAGCTTCTTCTGGTCCACCTaGTCCAGGATGTTCTTCCGGAGCACACGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: EVAHLSSFFWST*SRMFFRSTRAR
Trigger: CCTGGCCCGTGTGCTCCGGAAGAACATCCTGGACAAGGTGGACCAGAAGAAGCTACTCAGGTGTGCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 90 bp GCCACCACAGCCACTCGGGTAGGGGACGGCGCCGACTGTCTTTTCTaGGGTGGCAATGCTGGTGGAGGACTATTATCAACCACCCGAATG +
Preference number: 6 (lower is better)
Translates to: ATTATRVGDGADCLF*GGNAGGGLLSTTRM
Trigger: CATTCGGGTGGTTGATAATAGTCCTCCACCAGCATTGCCACCCAAGAAAAGACAGTCGGCGCCGTCCCCTACCCGAGTGGCTGTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 72 bp GACTCTGGCAACGGGCTAAGGTTCCAGGCCGTCTGCTaGGGTATCTGGTCTGCGTTAGAGAGGTCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: DSGNGLRFQAVC*GIWSALERSCW
Trigger: CCAGCAAGACCTCTCTAACGCAGACCAGATACCTCAGCAGACGGCCTGGAACCTTAGCCCGTTGCCAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 72 bp CGTTCTGCACCAGGGGTAAGATGGCCTCCAGCACCTTaGTGGCTGACCCTGGAAGCATCTCCAGTACCTTCT +
Preference number: 6 (lower is better)
Translates to: RSAPGVRWPPAP*WLTLEASPVPS
Trigger: AGAAGGTACTGGAGATGCTTCCAGGGTCAGCCAGCAAGGTGCTGGAGGCCATCTTACCCCTGGTGCAGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000438647.3
ENST00000481260.1
ENST00000683357.1
CDS CCA 72 bp TCGGGTAGGGGACGGCGCCGACTGTCTTTTCTTGGGTaGCAATGCTGGTGGAGGACTATTATCAACCACCCG +
Preference number: 6 (lower is better)
Translates to: SGRGRRRLSFLG*QCWWRTIINHP
Trigger: CGGGTGGTTGATAATAGTCCTCCACCAGCATTGCCACCCAAGAAAAGACAGTCGGCGCCGTCCCCTACCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp GCCACTCGGGTAGGGGACGGCGCCGACTGTCTTTTCTaGGGTGGCAATGCTGGTGGAGGACTATTATCAACC +
Preference number: 6 (lower is better)
Translates to: ATRVGDGADCLF*GGNAGGGLLST
Trigger: GGTTGATAATAGTCCTCCACCAGCATTGCCACCCAAGAAAAGACAGTCGGCGCCGTCCCCTACCCGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp AGAGGAGGTAGGCGGAAGGAAAGGCGGAACGGAAGCTaGGTGGTGAGGCACGAAATCCTGGGAGTAGGACCT +
Preference number: 6 (lower is better)
Translates to: RGGRRKERRNGS*VVRHEILGVGP
Trigger: AGGTCCTACTCCCAGGATTTCGTGCCTCACCACCAAGCTTCCGTTCCGCCTTTCCTTCCGCCTACCTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CAA 90 bp GTGGCATCTGGGAGGAGCTCAGTTGACTGTGACATCCCAGTCGTCTaGTTTAGGATCTCTACCTCGCGGTCTGTCAGGGGGAGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: VASGRSSVDCDIPVV*FRISTSRSVRGSSA
Trigger: AGCAGAGCTCCCCCTGACAGACCGCGAGGTAGAGATCCTAAACAAGACGACTGGGATGTCACAGTCAACTGAGCTCCTCCCAGATGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 72 bp CCTGGAAGCCACAGCACTGGTGGACATAAATTCTACTaGCTGCTGCTCCAGATCCAAGGGGAGAGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: PGSHSTGGHKFY*LLLQIQGERVA
Trigger: GGCTACCCTCTCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATTTATGTCCACCAGTGCTGTGGCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp AGGGGACGGCGCCGACTGTCTTTTCTTGGGTGGCAATaGTGGTGGAGGACTATTATCAACCACCCGAATGCC +
Preference number: 6 (lower is better)
Translates to: RGRRRLSFLGWQ*WWRTIINHPNA
Trigger: GGCATTCGGGTGGTTGATAATAGTCCTCCACCAGCATTGCCACCCAAGAAAAGACAGTCGGCGCCGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS GCA 72 bp TGCTGGAAGCAGCGCATGCTGTCGAGGATGTTGAACTaGTGCCACCGCTTGGAGAAGTTCACTTTCCCGTCG +
Preference number: 6 (lower is better)
Translates to: CWKQRMLSRMLN*CHRLEKFTFPS
Trigger: CGACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCATGCGCTGCTTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp AACACAGACTTATACGAGGGCACGGGCAAGCTGCCGTaGCGGCTGAGAAAGGAGTTAGAGACGGACACACTG +
Preference number: 6 (lower is better)
Translates to: NTDLYEGTGKLP*RLRKELETDTL
Trigger: CAGTGTGTCCGTCTCTAACTCCTTTCTCAGCCGGCACGGCAGCTTGCCCGTGCCCTCGTATAAGTCTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419442.1
ENST00000683357.1
CDS CCA 72 bp GGCTCTCCTCGAGAGGGAGCCAGCTCCTCGCTGCTCTaGCCAGAGGAATACAGATTGACATATTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: GSPREGASSSLL*PEEYRLTYSPS
Trigger: TGAGGGTGAATATGTCAATCTGTATTCCTCTGGCCAGAGCAGCGAGGAGCTGGCTCCCTCTCGAGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp GGGAGGAGCTCAGTTGACTGTGACATCCCAGTCGTCTaGTTTAGGATCTCTACCTCGCGGTCTGTCAGGGGG +
Preference number: 6 (lower is better)
Translates to: GRSSVDCDIPVV*FRISTSRSVRG
Trigger: CCCCCTGACAGACCGCGAGGTAGAGATCCTAAACAAGACGACTGGGATGTCACAGTCAACTGAGCTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp TGCGCCTGCTGGAAGCAGCGCATGCTGTCGAGGATGTaGAACTGCTGCCACCGCTTGGAGAAGTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: CACWKQRMLSRM*NCCHRLEKFTF
Trigger: GAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCATGCGCTGCTTCCAGCAGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS TCA 72 bp TCACGCCTTCCAGCATCACTTGGTCAGACCAGCGAATaGGGTTGGCGAGGCTTTGGTACACTCGGCTATAGC +
Preference number: 6 (lower is better)
Translates to: SRLPASLGQTSE*GWRGFGTLGYS
Trigger: GCTATAGCCGAGTGTACCAAAGCCTCGCCAACCTCATTCGCTGGTCTGACCAAGTGATGCTGGAAGGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000438647.3
ENST00000481260.1
ENST00000683357.1
CDS GCA 72 bp TGGAAGCAGCGCATGCTGTCGAGGATGTTGAACTGCTaGCACCGCTTGGAGAAGTTCACTTTCCCGTCGATG +
Preference number: 6 (lower is better)
Translates to: WKQRMLSRMLNC*HRLEKFTFPSM
Trigger: CATCGACGGGAAAGTGAACTTCTCCAAGCGGTGGCAGCAGTTCAACATCCTCGACAGCATGCGCTGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CCA 72 bp GAGCTTGTTCTTCTGCTGGTAGATGTGCTCGTTCTGTaGCGTCTGGTAGAACATAGAGGGCTGCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: ELVLLLVDVLVL*RLVEHRGLRLR
Trigger: TCGGAGCCGCAGCCCTCTATGTTCTACCAGACGCCACAGAACGAGCACATCTACCAGCAGAAGAACAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000419442.1
ENST00000683357.1
CDS CCA 72 bp CCGCTTGGAGAAGTTCACTTTCCCGTCGATGTAGTCTaGGTTTCCCAGGTGAACGAAGGTCAGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: PLGEVHFPVDVV*VSQVNEGQVLQ
Trigger: CTGCAGGACCTGACCTTCGTTCACCTGGGAAACCCAGACTACATCGACGGGAAAGTGAACTTCTCCAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS CAA 72 bp CCCTCCTGCTTGAGCGTCAGCCTGGACATAATTTCGTaGTGGTCAATGAGGGACAGCTCGTCCACTTCCTCC +
Preference number: 6 (lower is better)
Translates to: PSCLSVSLDIIS*WSMRDSSSTSS
Trigger: GGAGGAAGTGGACGAGCTGTCCCTCATTGACCACAACGAAATTATGTCCAGGCTGACGCTCAAGCAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 90 bp TCCAGCACAGCCTTGATGACCCCCTTCACAGTCGTCACCATCTCCTaGTCTTCTGAGTTCACGCCTTCCAGCATCACTTGGTCAGACCAG +
Preference number: 6 (lower is better)
Translates to: SSTALMTPFTVVTIS*SSEFTPSSITWSDQ
Trigger: CTGGTCTGACCAAGTGATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATGGTGACGACTGTGAAGGGGGTCATCAAGGCTGTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CCA 72 bp TCCTGCTTGAGCGTCAGCCTGGACATAATTTCGTTGTaGTCAATGAGGGACAGCTCGTCCACTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SCLSVSLDIISL*SMRDSSSTSSS
Trigger: GGAGGAGGAAGTGGACGAGCTGTCCCTCATTGACCACAACGAAATTATGTCCAGGCTGACGCTCAAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp GCCTTGATGACCCCCTTCACAGTCGTCACCATCTCCTaGTCTTCTGAGTTCACGCCTTCCAGCATCACTTGG +
Preference number: 6 (lower is better)
Translates to: ALMTPFTVVTIS*SSEFTPSSITW
Trigger: CCAAGTGATGCTGGAAGGCGTGAACTCAGAAGACAAGGAGATGGTGACGACTGTGAAGGGGGTCATCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp CATAGTCGGGATCATAGTGGTCTAGTGTTTCACAGCTaGTGTTCCGGGAGCACTGCCCACTGTCCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: HSRDHSGLVFHS*CSGSTAHCPCP
Trigger: TGGACAGGGACAGTGGGCAGTGCTCCCGGAACACAAGCTGTGAAACACTAGACCACTATGATCCCGACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 72 bp TCATCCACCACCCGTACCAGCACGAAGAACGTGTTCTaGCTGACGCGCTTCTTGAATGTGTCGGCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: SSTTRTSTKNVF*LTRFLNVSAKG
Trigger: TCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGTGCTGGTACGGGTGGTGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 90 bp AGGCAGAGCTCATCCACCACCCGTACCAGCACGAAGAACGTGTTCTaGCTGACGCGCTTCTTGAATGTGTCGGCAAAGGGAGAGAATTTC +
Preference number: 6 (lower is better)
Translates to: RQSSSTTRTSTKNVF*LTRFLNVSAKGENF
Trigger: GAAATTCTCTCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGTGCTGGTACGGGTGGTGGATGAGCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp CGACCTCTTCATCCGTGGCATCTGGGAGGAGCTCAGTaGACTGTGACATCCCAGTCGTCTTGTTTAGGATCT +
Preference number: 6 (lower is better)
Translates to: RPLHPWHLGGAQ*TVTSQSSCLGS
Trigger: AGATCCTAAACAAGACGACTGGGATGTCACAGTCAACTGAGCTCCTCCCAGATGCCACGGATGAAGAGGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS TCA 72 bp AGGAGCAGTAAAATCACCCACAAATTCGACAGGGGCTaGGGAACCTCCATGCTGAAAGGGCAGAATAGCAGC +
Preference number: 6 (lower is better)
Translates to: RSSKITHKFDRG*GTSMLKGQNSS
Trigger: GCTGCTATTCTGCCCTTTCAGCATGGAGGTTCCTCAGCCCCTGTCGAATTTGTGGGTGATTTTACTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1
CDS GCA 72 bp CTCTGGGGAGATGAAGGTCCTGTAGGTGGTCAGGAATaGCTCGCAGTACAACACCAAATCTTTCCTGTCAGT +
Preference number: 6 (lower is better)
Translates to: LWGDEGPVGGQE*LAVQHQIFPVS
Trigger: ACTGACAGGAAAGATTTGGTGTTGTACTGCGAGGCATTCCTGACCACCTACAGGACCTTCATCTCCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 72 bp CTCATATCTGTACTGCAGCTTCTTGATGAGCTCCTCTaGGGAGATGAAGGTCCTGTAGGTGGTCAGGAATGC +
Preference number: 6 (lower is better)
Translates to: LISVLQLLDELL*GDEGPVGGQEC
Trigger: GCATTCCTGACCACCTACAGGACCTTCATCTCCCCAGAGGAGCTCATCAAGAAGCTGCAGTACAGATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CAA 72 bp CGTCTGCTGAGGTATCTGGTCTGCGTTAGAGAGGTCTaGCTGGAGGAATTCATAGTCGGGATCATAGTGGTC +
Preference number: 6 (lower is better)
Translates to: RLLRYLVCVREV*LEEFIVGIIVV
Trigger: GACCACTATGATCCCGACTATGAATTCCTCCAGCAAGACCTCTCTAACGCAGACCAGATACCTCAGCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000481260.1
ENST00000683357.1
CDS CAA 90 bp ACCACCCGTACCAGCACGAAGAACGTGTTCTTGCTGACGCGCTTCTaGAATGTGTCGGCAAAGGGAGAGAATTTCTCATATCTGTACTGC +
Preference number: 6 (lower is better)
Translates to: TTRTSTKNVFLLTRF*NVSAKGENFSYLYC
Trigger: GCAGTACAGATATGAGAAATTCTCTCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGTGCTGGTACGGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 72 bp CTCCAGCCAGCTCAGGTTTTTGTTCACAGGCTTCTCTaGAATCTTTACGGACACCTCAGCTGGTTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LQPAQVFVHRLL*NLYGHLSWFSL
Trigger: AAGGGAAAACCAGCTGAGGTGTCCGTAAAGATTCCAGAGAAGCCTGTGAACAAAAACCTGAGCTGGCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438647.3
CDS CAA 72 bp ACCAGCACGAAGAACGTGTTCTTGCTGACGCGCTTCTaGAATGTGTCGGCAAAGGGAGAGAATTTCTCATAT +
Preference number: 6 (lower is better)
Translates to: TSTKNVFLLTRF*NVSAKGENFSY
Trigger: ATATGAGAAATTCTCTCCCTTTGCCGACACATTCAAGAAGCGCGTCAGCAAGAACACGTTCTTCGTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000414781.1
ENST00000683357.1
CDS CCA 72 bp AAATCTGTCTGTTGCCTCTTTGTTCACAGGCTTCTCTaGAATCTTTACGGACACCTCAGCTGGTTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: KSVCCLFVHRLL*NLYGHLSWFSL
Trigger: AAGGGAAAACCAGCTGAGGTGTCCGTAAAGATTCCAGAGAAGCCTGTGAACAAAGAGGCAACAGACAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372189.7
ENST00000372190.7
ENST00000372195.5
ENST00000683357.1