RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAP1GDS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138698

Ensembl transcript IDs: ENST00000264572.11, ENST00000339360.9, ENST00000380158.8, ENST00000408900.7, ENST00000408927.8, ENST00000453712.6, ENST00000503667.5, ENST00000503745.1, ENST00000505378.5, ENST00000507303.5, ENST00000508213.5, ENST00000508490.5, ENST00000509011.5, ENST00000509501.5, ENST00000510870.5, ENST00000511212.5, ENST00000511379.5, ENST00000512857.5, ENST00000514122.5, ENST00000514139.2, ENST00000515187.5

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTaGTATGGGGCCATCTGCAGAATGAACTGGACTGGCTACTATGGC +
Preference number: 1 (lower is better)
Translates to: AVLSGKVEVANSNSD*YGAICRMNWTGYYG
Trigger: GCCATAGTAGCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR GCA 90 bp AGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTaGAGTCCTTCTATATCGAAGCCCATCTTGCCTTTTAGGCCAGTA +
Preference number: 1 (lower is better)
Translates to: RKELLSPPWQPFLLS*SPSISKPILPFRPV
Trigger: TACTGGCCTAAAAGGCAAGATGGGCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CCA 90 bp AAAGTCCAACTTAGATTATCCACAGAGATGTGTAGCATCACATGTTaGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTAC +
Preference number: 1 (lower is better)
Translates to: KVQLRLSTEMCSITC*RGRSYCHLRGSPFY
Trigger: GTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACATGTGATGCTACACATCTCTGTGGATAATCTAAGTTGGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR GCA 90 bp GGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATaGACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGA +
Preference number: 1 (lower is better)
Translates to: GTYSGSSIGIRTSHA*TSGMVENEAEEAAG
Trigger: TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR GCA 90 bp AAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCTaGAGAATGAACTGGACTGGCTACTATGGCTTTTATAACCTGCTT +
Preference number: 1 (lower is better)
Translates to: KVEVANSNSDWYGAI*RMNWTGYYGFYNLL
Trigger: AAGCAGGTTATAAAAGCCATAGTAGCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CCA 90 bp GCTTTCTCATATCCTTTAAAATTGCTGCAGTTCTCAGTGGGAAAGTaGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCTGCA +
Preference number: 1 (lower is better)
Translates to: AFSYPLKLLQFSVGK*RWQTLTAIGMGPSA
Trigger: TGCAGATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGCAATTTTAAAGGATATGAGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR GCA 90 bp TTCCCTGTATACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTaGAACTCTTTACTTACCTCTTTTCTCTCCTACCAGGCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: FPVYQRNQQGRQGCL*NSLLTSFLSYQARA
Trigger: AGCCCTGGCCTGGTAGGAGAGAAAAGAGGTAAGTAAAGAGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTATACAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR CCA 90 bp TACTTCTGCTATGATGTTAGCTACTTTGGCTTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAACAGCTGAAGTATTCCACTTGCTTG +
Preference number: 1 (lower is better)
Translates to: YFCYDVSYFGFAGRL*SQQTCKQLKYSTCL
Trigger: CAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR TCA 90 bp TTAGCTGCATATTTATCTTTTAACATAGACTGGGGGAGACTAGGCTaGATAGAGGTGGTCTACGCAGCCTCTCAAACAAATCTGCTATCT +
Preference number: 1 (lower is better)
Translates to: LAAYLSFNIDWGRLG*IEVVYAASQTNLLS
Trigger: AGATAGCAGATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAGCCTAGTCTCCCCCAGTCTATGTTAAAAGATAAATATGCAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR TCA 90 bp AGTGAAGAGTACACTATATTTCGCCAAGGGGGTCTTCTCATCTCTTaGGTCTTGGCTTTCTCATATCCTTTAAAATTGCTGCAGTTCTCA +
Preference number: 1 (lower is better)
Translates to: SEEYTIFRQGGLLIS*VLAFSYPLKLLQFS
Trigger: TGAGAACTGCAGCAATTTTAAAGGATATGAGAAAGCCAAGACTCAAGAGATGAGAAGACCCCCTTGGCGAAATATAGTGTACTCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR TCA 90 bp AAAGGAGAAACATTATTCTGGTGCATACATGTTCCACTCCCGTGTTaGTGTATACAACCTAGCTATTACATGGGCATAACTGACTCATTA +
Preference number: 1 (lower is better)
Translates to: KGETLFWCIHVPLPC*CIQPSYYMGITDSL
Trigger: TAATGAGTCAGTTATGCCCATGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGCACCAGAATAATGTTTCTCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR TCA 90 bp AGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACTAACTATAGGTTTAGAAATCTTATT +
Preference number: 1 (lower is better)
Translates to: SNRNTRERLWVETCL*QSHDHTNYRFRNLI
Trigger: AATAAGATTTCTAAACCTATAGTTAGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: AQATGIQENGYGWRLAFDSGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 2 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTSGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CCA 90 bp TGTTGGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTTTCTCAGTGGGAAAGTaGAGGTGGCAAACTCTAACA +
Preference number: 2 (lower is better)
Translates to: CWRGRSYCHLRGSPFYCLFSVGK*RWQTLT
Trigger: TGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAA...AAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 2 (lower is better)
Translates to: AQATGIQENGYGWRLAFDEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR TCA 90 bp ACCCATATTGATAAGCTGAGCTTGAAGCGAATGGCTATCGTAACATATGTTTCCAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: THIDKLSLKRMAIVTYVSRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...GGAAACATATGTTACGATAGCCATTCGCTTCAAGCTCAGCTTATCAATATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
3UTR-3UTR CCA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCATCTGCAGAATGAACTaGACTGGCTACTATGGCTTT +
Preference number: 2 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSICRMN*TGYYGF
Trigger: AAAGCCATAGTAGCCAGTCCAGTTCATTCTGCAGAT...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR GCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATAACCTCAGAAAGTCTTaGCAAGTTTGTGGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYNLRKS*QVCGSF
Trigger: GAAACTGCCACAAACTTGGCAAGACTTTCTGAGGTT...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 2 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR TCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CCA 90 bp TACTTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTGCAAACAGCTGAAGGAGTTTAAAGCTGTATaGCACACTTTATGGTCCCCC +
Preference number: 2 (lower is better)
Translates to: YFGFAGRLWSQQTCKQLKEFKAV*HTLWSP
Trigger: GGGGGACCATAAAGTGTGCCATACAGCTTTAAACTC...CTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR CCA 90 bp ACTAGGCTGAATAGAGGTGGTCTACGCAGCCTCTCAAACAAATCTGCTATCTTACTCCCTGATGTGGTTTaGCTGTTTGTCCCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: TRLNRGGLRSLSNKSAILLPDVV*LFVPSK
Trigger: TTTGGAAGGGACAAACAGCCAAACCACATCAGGGAG...TAAGATAGCAGATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR TCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: IQENGYGWRLAFDKVMITKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR TCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR TCA 90 bp CTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATAGTATTCCAATATTGGAGGTaGGGCCAGGCAGGAGGTAAT +
Preference number: 2 (lower is better)
Translates to: LILSSSKWGRAVTTEIIVFQYWR*GQAGGN
Trigger: ATTACCTCCTGCCTGGCCTCACCTCCAATATTGGAA...TACTATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR TCA 90 bp ACTAGGCTGAATAGAGGTGGTCTACGCAGCCTCTCAAACAAATCTGCTATCTTACCAATGAAAACTCCCTaGTGTGGTTTGGCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: TRLNRGGLRSLSNKSAILPMKTP*CGLAVC
Trigger: ACAAACAGCCAAACCACATCAGGGAGTTTTCATTGG...TAAGATAGCAGATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAGCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR TCA 90 bp ACTCTTTACTTACCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTTCCTTATTTGTCCAATaGAAACTCCCTGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: TLYLPLFSPTRPGLPQYTSLFVQ*KLPDVV
Trigger: AACCACATCAGGGAGTTTTCATTGGACAAATAAGGA...AGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGGTAAGTAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR CCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATAGTTTACTGCATGTGTaGAGCAAGTCATTATGTAGT +
Preference number: 2 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYSLLHV*SKSLCS
Trigger: ACTACATAATGACTTGCTCCACACATGCAGTAAACT...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CCA 90 bp CTTCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATTTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 2 (lower is better)
Translates to: LPGLCYLAAAPVVKSIQHFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...ATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR CCA 90 bp TCTCTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATACAGGTCCCTCATGAATaGTTAGTACCATCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: SLILSSSKWGRAVTTEIIQVPHE*LVPSPW
Trigger: CCAAGGGGATGGTACTAACCATTCATGAGGGACCTG...TATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR CAA 90 bp CGCATAAACTCATTTTTGGCTACTTCTGCTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTGCAAACAGC +
Preference number: 2 (lower is better)
Translates to: RINSFLATSAMMLAT*ALQEDCGVNRLANS
Trigger: GCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGAGTTTATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR TCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTGGTATGGTAGAGAATaGAGCGGAAGAAGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHWYGRE*SGRSRW
Trigger: CCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CCA 90 bp TGCACCAGTGGTGAAATCAATCCAGCATCCACACATGGAATTCGCATAAACTCATTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 2 (lower is better)
Translates to: CTSGEINPASTHGIRINSFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...TGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 2 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR GCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 2 (lower is better)
Translates to: LLNVAQATGIQENGYGWRRTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR GCA 90 bp TGCAGTCCTTCTATATCGAAGCCCATCTTGCCTTTTAGGCCAGTAGTGGTCAAAAAGCAAAACCCGAAATaGTCTGTAATAGGGATTGTA +
Preference number: 2 (lower is better)
Translates to: CSPSISKPILPFRPVVVKKQNPK*SVIGIV
Trigger: TACAATCCCTATTACAGAGCATTTCGGGTTTTGCTT...TTTGACCACTACTGGCCTAAAAGGCAAGATGGGCTTCGATATAGAAGGACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CAA 90 bp TCAAATTTGGGTATGGGGAGAAGGCAGGTGGGTCACAGGGAGGTTTaGATTAATTTACAAAGATTGTGTTTCAAAGCTCTAAAAACCCAT +
Preference number: 2 (lower is better)
Translates to: SNLGMGRRQVGHREV*INLQRLCFKALKTH
Trigger: ATGGGTTTTTAGAGCTTTGAAACACAATCTTTGTAAATTAATCAAAACCTCCCTGTGACCCACCTGCCTTCTCCCCATACCCAAATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR GCA 90 bp ATCAATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTTGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 2 (lower is better)
Translates to: INPASTHGIRINSFLATSWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...AGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR GCA 90 bp TCTCTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATACCTCTCAAACAAATCTaGTATCTTAGCACAGCAACT +
Preference number: 2 (lower is better)
Translates to: SLILSSSKWGRAVTTEIIPLKQI*YLSTAT
Trigger: AGTTGCTGTGCTAAGATAGCAGATTTGTTTGAGAGG...TATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR GCA 90 bp TCTCTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATAAGACAAGGTTGTCTTTaGAACTCTTTACTTACCTCT +
Preference number: 2 (lower is better)
Translates to: SLILSSSKWGRAVTTEIIRQGCL*NSLLTS
Trigger: AGAGGTAAGTAAAGAGTTGCAAAGACAACCTTGTCT...TATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR CAA 90 bp TTGATTAATTTACAAAGATTGTGTTTCAAAGCTCTAAAAACCCATTaGGTGGTGGCAGTGGCAGTGAAGAGTACACTATATTTCGCCAAG +
Preference number: 2 (lower is better)
Translates to: LINLQRLCFKALKTH*VVAVAVKSTLYFAK
Trigger: CTTGGCGAAATATAGTGTACTCTTCACTGCCACTGCCACCACCAAATGGGTTTTTAGAGCTTTGAAACACAATCTTTGTAAATTAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR GCA 90 bp TGGACATCAAAGGGAACAATCAGTCAAGATTCTTTACCTCCATTAGAATTTAACAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 2 (lower is better)
Translates to: WTSKGTISQDSLPPLEFNRTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...GTTAAATTCTAATGGAGGTAAAGAATCTTGACTGATTGTTCCCTTTGATGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CCA 72 bp AGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTaGTATGGGGCCATCTGCAGAATGAACTGGACTGGC +
Preference number: 3 (lower is better)
Translates to: SGKVEVANSNSD*YGAICRMNWTG
Trigger: GCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR GCA 72 bp CTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTaGAGTCCTTCTATATCGAAGCCCATCTTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: LLSPPWQPFLLS*SPSISKPILPF
Trigger: AAAAGGCAAGATGGGCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CCA 72 bp CTTAGATTATCCACAGAGATGTGTAGCATCACATGTTaGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: LRLSTEMCSITC*RGRSYCHLRGS
Trigger: GCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACATGTGATGCTACACATCTCTGTGGATAATCTAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CAA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATAAACCTCAGAAAGTCTaGCCAAGTTTGTGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYKPQKV*PSLWQF
Trigger: AAACTGCCACAAACTTGGCAAGACTTTCTGAGGTTT...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CAA 90 bp TCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 3 (lower is better)
Translates to: SWSLLFSSCTSGEINPASVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...GGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR CAA 90 bp ACTCTTTACTTACCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTATGTGGTTTGGCTGTTaGTCCCTTCCAAATCTCATG +
Preference number: 3 (lower is better)
Translates to: TLYLPLFSPTRPGLPQYTMWFGC*SLPNLM
Trigger: CATGAGATTTGGAAGGGACAAACAGCCAAACCACAT...AGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGGTAAGTAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR GCA 72 bp GTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCTaGAGAATGAACTGGACTGGCTACTATGGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: VANSNSDWYGAI*RMNWTGYYGFY
Trigger: ATAAAAGCCATAGTAGCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCAATCGCTGTTAGAGTTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CCA 72 bp AACAGCGATTGGTATGGGGCCATCTGCAGAATGAACTaGACTGGCTACTATGGCTTTTATAACCTGCTTTCC +
Preference number: 3 (lower is better)
Translates to: NSDWYGAICRMN*TGYYGFYNLLS
Trigger: GGAAAGCAGGTTATAAAAGCCATAGTAGCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCAATCGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR-3UTR CAA 90 bp ACTTCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCAGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 3 (lower is better)
Translates to: TSWSLLFSSCTSGEINPAVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...TGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR-3UTR CAA 90 bp TCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 3 (lower is better)
Translates to: SWSLLFSSCTSGEINPASMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...GGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR CCA 72 bp TATCCTTTAAAATTGCTGCAGTTCTCAGTGGGAAAGTaGAGGTGGCAAACTCTAACAGCGATTGGTATGGGG +
Preference number: 3 (lower is better)
Translates to: YPLKLLQFSVGK*RWQTLTAIGMG
Trigger: CCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGCAATTTTAAAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR GCA 72 bp TTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCCACTTGCTTGGATTTT +
Preference number: 3 (lower is better)
Translates to: FGFAGRLWSQQT*KQLKYSTCLDF
Trigger: AAAATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR CCA 72 bp TATGATGTTAGCTACTTTGGCTTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAACAGCTGAAGTATTCC +
Preference number: 3 (lower is better)
Translates to: YDVSYFGFAGRL*SQQTCKQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR TCA 72 bp TATTTATCTTTTAACATAGACTGGGGGAGACTAGGCTaGATAGAGGTGGTCTACGCAGCCTCTCAAACAAAT +
Preference number: 3 (lower is better)
Translates to: YLSFNIDWGRLG*IEVVYAASQTN
Trigger: ATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAGCCTAGTCTCCCCCAGTCTATGTTAAAAGATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR GCA 72 bp AGCGGTTCTTCAATTGGTATTAGAACATCACATGCATaGACAAGTGGTATGGTAGAGAATGAAGCGGAAGAA +
Preference number: 3 (lower is better)
Translates to: SGSSIGIRTSHA*TSGMVENEAEE
Trigger: TTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR-3UTR CAA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAACAGCGGTTCTTCAATaGGTATTAGAACATCACATG +
Preference number: 3 (lower is better)
Translates to: LLNVAQATGIQENGYGWRTAVLQ*VLEHHM
Trigger: CATGTGATGTTCTAATACCAATTGAAGAACCGCTGT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
3UTR TCA 72 bp ACATTATTCTGGTGCATACATGTTCCACTCCCGTGTTaGTGTATACAACCTAGCTATTACATGGGCATAACT +
Preference number: 3 (lower is better)
Translates to: TLFWCIHVPLPC*CIQPSYYMGIT
Trigger: AGTTATGCCCATGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGCACCAGAATAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR-3UTR CAA 90 bp AGTCAAAAGTCCAACTTAGATTATCCACAGAGATGTGTAGCATCACATGTTGGAACAGCGGTTCTTCAATaGGTATTAGAACATCACATG +
Preference number: 3 (lower is better)
Translates to: SQKSNLDYPQRCVASHVGTAVLQ*VLEHHM
Trigger: CATGTGATGTTCTAATACCAATTGAAGAACCGCTGT...TCCAACATGTGATGCTACACATCTCTGTGGATAATCTAAGTTGGACTTTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAAGGAGCAGCTGGTGCTaGTGCAGGCGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHARSSWC*CRRRGR
Trigger: GCGGCCGCGCCGCCTGCAGCAGCACCAGCTGCTCCT...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRSGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSGKVEVANSNSDWYGAISGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCTGAGCTTGAAGCGAATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: AELEANGYRNICFLEPCPRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...CGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATTCGCTTCAAGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CCA 90 bp AATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTGCTCCGGGGAGGAGCAGCTaGTGCTGCTGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NPASTHGIRINSFLATSAPGRSS*CCCRRR
Trigger: GCGCCGCCTGCAGCAGCACCAGCTGCTCCTCCCCGG...AGCAGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503667.5
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGGAATGGCCAGGTTTCTaGGGGCACTTAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWREWPGF*GHLVLH
Trigger: ATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTC...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGTGGTATGGTAGAGAATaGAGCGGAAGAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRWYGRE*SGRSRW
Trigger: CCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCA...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRTCLVN*TSALMA
Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATCAATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTAGGAGCAGCTGGTGCTaGTGCAGGCGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: INPASTHGIRINSFLATSRSSWC*CRRRGR
Trigger: GCGGCCGCGCCGCCTGCAGCAGCACCAGCTGCTCCT...AGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503667.5
CDS-3UTR TCA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCCAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCGAATGGCCAGGTTTCTaGGGGCACTTAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSEWPGF*GHLVLH
Trigger: ATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTC...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAGACAGCAGTCTGTTTaGCTCCCCCATCACACCAGC +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLRQQSV*LPHHTS
Trigger: GCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGTTGGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGTGAGAGAGGCCTGCTaGGCAACACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CWRGRSYCHLRGSPFYCLVREAC*ATLLFS
Trigger: TGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCAC...AAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGCAPPA*STALLP
Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACCCGGGGAGGAGCAGCTaGTGCTGCTGCAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: YNMHILLNVAQATGIQENPGRSS*CCCRRR
Trigger: GCGCCGCCTGCAGCAGCACCAGCTGCTCCTCCCCGG...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTATGGTATGGTAGAGAATaGAGCGGAAGAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLWYGRE*SGRSRW
Trigger: CCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCA...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGGCCATGGTAACTAGATaGTTGATGCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWAMVTR*LMPPLC
Trigger: GCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGC...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATCCACAGTAAGTCTCTaGTCTGTGAGAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGSTVSL*SVREAC
Trigger: GCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGGGTCAACTGCACTTCTaGCCTCATGGCTATCGTAAC +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWGQLHF*PHGYRN
Trigger: GTTACGATAGCCATGAGGGCAGAAGTGCAGTTGACC...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCAACTCTAACAGCGATTaGTATGGGGCCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSGKVEVANSNSDWYGAINSNSD*YGAICR
Trigger: TCTGCAGATGGCCCCATACCAATCGCTGTTAGAGTT...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCTGCTGCAGTTCTCAGTaGGAAAGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSCCSSQ*ESGGGK
Trigger: TTTGCCACCTCCACTTTCCCACTGAGAACTGCAGCA...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CAA 72 bp GCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTaGCAGTCCTTCTATATCGAAGCCCATCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ATVTSVAALSTV*QSFYIEAHLAF
Trigger: AAAGGCAAGATGGGCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACCAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACGAATGGCCAGGTTTCTaGGGGCACTTAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDEWPGF*GHLVLH
Trigger: ATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTC...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGTCAAAACTGCCTCTGTaGCCCCAGCTGATAACATCT +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWSKLPL*PQLITS
Trigger: AGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGA...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGCCCAGAAGTTTGAACTaGACAGGAGGCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRPRSLN*TGGISD
Trigger: ATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGG...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTGTGCTCTGCTTTGTTCCACTCCCGTGTTaGTGTATACAACCTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PLFSPTRPGLPQYTVLCFVPLPC*CIQPSY
Trigger: ATAGCTAGGTTGTATACATCAACACGGGAGTGGAAC...AAAGCAGAGCACAGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTATGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLCFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGCCATGGTAACTAGATaGTTGATGCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLAMVTR*LMPPLC
Trigger: GCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGC...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATCTGTGAGAGAGGCCTaGTGGGCAACACTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGSVREA*WATLLF
Trigger: GAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTGTGCTCTGCTTTCATTTCTGTAAGAGCTaGATTTTGGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PLFSPTRPGLPQYTVLCFHFCKS*ILAVDA
Trigger: GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATG...AAAGCAGAGCACAGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp TACCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTGTGCTCTGCTTCCCTCTTCACCTTCTaGCATGATTGTAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YLFSLLPGQGSLSILCSASLFTF*HDCKLP
Trigger: AGGAAGCTTACAATCATGGCAGAAGGTGAAGAGGGA...AGCAGAGCACAGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCCAGCAAGCTGTAGCTaGTGGTTATTTGATGGGATC +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWPASCS*WLFDGI
Trigger: GATCCCATCAAATAACCACCAGCTACAGCTTGCTGG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCTGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEACAPPA*STALLP
Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCGTGGGAAAGTGGAGGTaGCAAACTCTAACAGCGATT +
Preference number: 4 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSVGKWR*QTLTAI
Trigger: AATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCAC...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp AATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTCAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: NGYRNICFLEPCPFEAALQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR TCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAAGACAGCAGTCTGTTTaGCTCCCCCATCACACCAGC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHARQQSV*LPHHTS
Trigger: GCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCT...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACG +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRTLLFS*LRSLDT
Trigger: CGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACATGGTATGGTAGAGAATaGAGCGGAAGAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTWYGRE*SGRSRW
Trigger: CCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCA...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACT +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWVETCL*QSHDHT
Trigger: AGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCAC...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAGGGCCATCTGCAGAATaGACTGGACTGGCTACTATG +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTGPSAE*TGLATM
Trigger: CATAGTAGCCAGTCCAGTTCATTCTGCAGATGGCCC...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp ACTCTTTACTTACCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTTTCCAATATTGGAGGTaGGGCCAGGCAGGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: TLYLPLFSPTRPGLPQYTFQYWR*GQAGGN
Trigger: ATTACCTCCTGCCTGGCCTCACCTCCAATATTGGAA...AGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGGTAAGTAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACTGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDCFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GAGCTTGAAGCGAATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTTGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ELEANGYRNICFLEPCPFCFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...AAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATTCGCTTCAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACATCCACAGTAAGTCTCTaGTCTGTGAGAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTSTVSL*SVREAC
Trigger: GCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGA...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTTCLVN*TSALMA
Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCCATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: LSGKVEVANSNSDWYGAIHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCATTTCTGTAAGAGCTaGATTTTGGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWHFCKS*ILAVDA
Trigger: GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSGKVEVANSNSDWYGAIRTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp CCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTGTGCTCTGCTTTGAAACATTATTCTGGTaGATACATGTTCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: PLFSPTRPGLPQYTVLCFETLFW*IHVPLP
Trigger: CGGGAGTGGAACATGTATGCACCAGAATAATGTTTC...AAAGCAGAGCACAGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGGCAAGCTGTAGCTGGTaGTTATTTGATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWASCSW*LFDGIQ
Trigger: TTGGATCCCATCAAATAACCACCAGCTACAGCTTGC...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGACCAGCAAGCTGTAGCTaGTGGTTATTTGATGGGATC +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGPASCS*WLFDGI
Trigger: GATCCCATCAAATAACCACCAGCTACAGCTTGCTGG...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATGTGCACCACCTGCTTaGTCAACTGCACTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTCAPPA*STALLP
Trigger: GGGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACA...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQSGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAAGTAGTGGTCAAATTTaGGTATGGGGAGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGSSGQI*VWGEGR
Trigger: CCTGCCTTCTCCCCATACCCAAATTTGACCACTACT...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAAGACTTGCAAACAGCTaGAGTATTCCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGRLANS*SIPLAW
Trigger: CCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCT...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCACACATCAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SLLFSSCTSGEINPASTHQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...ATGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR TCA 90 bp TGCACCAGTGGTGAAATCAATCCAGCATCCACACATGGAATTCGCATAAACTCACAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: CTSGEINPASTHGIRINSQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...TGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR TCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACT +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLVETCL*QSHDHT
Trigger: AGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCAC...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TCTGGTGCATACATGTTCCACTCCCGTGTTGATGTATACAACCTAGCTATTACATGGGGGAGACTAGGCTaGATAGAGGTGGTCTACGCA +
Preference number: 4 (lower is better)
Translates to: SGAYMFHSRVDVYNLAITWGRLG*IEVVYA
Trigger: TGCGTAGACCACCTCTATTCAGCCTAGTCTCCCCCA...TGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGCACCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp TGTTGGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: CWRGRSYCHLRGSPFYCLLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...AAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGGCAAAATTTGCAATTaGCAATGCTCCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLGKICN*QCSSKL
Trigger: CAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCC...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATCCACAGTAAGTCTCTaGTCTGTGAGAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTSTVSL*SVREAC
Trigger: GCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGA...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLVNYNL*TTCLVN
Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGCAAGCTGTAGCTGGTaGTTATTTGATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLASCSW*LFDGIQ
Trigger: TTGGATCCCATCAAATAACCACCAGCTACAGCTTGC...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACCACCAGCATGATCTTTaGCTTCACACCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDHQHDL*LHTIPP
Trigger: TGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTG...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGCATGACTGCGAAGTTTaGATACGACATCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRHDCEV*IRHLEK
Trigger: CTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATG...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGTGAGAGAGGCCTGCTaGGCAACACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAVREAC*ATLLFS
Trigger: TGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCAC...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATCAAGAGCTTCTCATTaGCGGGATCTGTTATACTGC +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGSRASH*RDLLYC
Trigger: GCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TGCAACTCTTTACTTACCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTAGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CNSLLTSFLSYQARAPSVVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...TACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGGTAAGTAAAGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR TCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTAGAGCCCTGCCCGTTTaGAGCAGCACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTRALPV*SSTSWS
Trigger: AGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCT...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGAATGGCCAGGTTTCTaGGGGCACTTAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQEWPGF*GHLVLH
Trigger: ATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACG +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLTLLFS*LRSLDT
Trigger: CGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACT +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDVETCL*QSHDHT
Trigger: AGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCAC...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCATGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHACFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGCACTTAGTGCTGCATaGTGTACTGTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYALSAA*CTVTFP
Trigger: TGGAAATGTAACAGTACAGCATGCAGCACTAAGTGC...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp TGTTGGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTTTTTGTTCTCATGACTaGGAAGTTTGGATACGACAT +
Preference number: 4 (lower is better)
Translates to: CWRGRSYCHLRGSPFYCLFCSHD*EVWIRH
Trigger: ATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAA...AAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCATCTGTGAGAGAGGCCTaGTGGGCAACACTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHASVREA*WATLLF
Trigger: GAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGA...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTTCCACAGTAAGTCTCTaGTCTGTGAGAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLSTVSL*SVREAC
Trigger: GCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGA...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACCATTTCTGTAAGAGCTaGATTTTGGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDHFCKS*ILAVDA
Trigger: GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATG...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLRTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CCTCTTTTCTCTCCTACCAGGCCAGGGCTCCCTCAGTATACTGTGCTCTGCTTTAGACAAGGTTGTCTTTaGAACTCTTTACTTACCTCT +
Preference number: 4 (lower is better)
Translates to: PLFSPTRPGLPQYTVLCFRQGCL*NSLLTS
Trigger: AGAGGTAAGTAAAGAGTTGCAAAGACAACCTTGTCT...AAAGCAGAGCACAGTATACTGAGGGAGCCCTGGCCTGGTAGGAGAGAAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTATTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGTCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWSSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACGCAAGCTGTAGCTGGTaGTTATTTGATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDASCSW*LFDGIQ
Trigger: TTGGATCCCATCAAATAACCACCAGCTACAGCTTGC...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCATGACTGCGAAGTTTaGATACGACATCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWHDCEV*IRHLEK
Trigger: CTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAGTGAGAGAGGCCTGCTaGGCAACACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAVREAC*ATLLFS
Trigger: TGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCAC...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTAGCGGAAGAAGCCGCTaGATGGAGGACAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTSGRSR*MEDRGE
Trigger: TTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCT...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCAGTTTACTGCATGTGTaGAGCAAGTCATTATGTAGT +
Preference number: 4 (lower is better)
Translates to: LSGKVEVANSNSDWYGAISLLHV*SKSLCS
Trigger: ACTACATAATGACTTGCTCCACACATGCAGTAAACT...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACTTCTCAGTGGGAAAGTaGAGGTGGCAAACTCTAACA +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDFSVGK*RWQTLT
Trigger: TGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAA...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp CCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCAGAGTTTAAAGCTGTATaGCACACTTTATGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGLCYLAAAPVVKSIQHPEFKAV*HTLWSP
Trigger: GGGGGACCATAAAGTGTGCCATACAGCTTTAAACTC...TGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR TCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCCCCAGAAGTTTGAACTaGACAGGAGGCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAPRSLN*TGGISD
Trigger: ATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGG...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACAGACAGCAGTCTGTTTaGCTCCCCCATCACACCAGC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHRQQSV*LPHHTS
Trigger: GCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCATGGTGGCAGTGGCAGTaGAGAGTACACTATATTTCG +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAWWQWQ*RVHYIS
Trigger: CGAAATATAGTGTACTCTTCACTGCCACTGCCACCA...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp GCATACATGTTCCACTCCCGTGTTGATGTATACAACCTAGCTATTACATGGGCACTGGTTAAGAGTCTGTaGCTTCCCCTTTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AYMFHSRVDVYNLAITWALVKSL*LPLCLS
Trigger: AGAGAGACAAAGGGGAAGTCACAGACTCTTAACCAG...TGCCCATGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACTGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTCCTGGTCTTTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: RNICFLEPCPFEAALPGLLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...AAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR GCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGATGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LLNVAQATGIQENGYGWRCFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGGCAAAATTTGCAATTaGCAATGCTCCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAGKICN*QCSSKL
Trigger: CAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCC...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAATTTCTGGCAAAATTTaGAATTGCCAATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLISGKI*NCQCSS
Trigger: GCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAAT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAGCCATGGTAACTAGATaGTTGATGCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITAMVTR*LMPPLC
Trigger: GCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGC...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGATCTGTGAGAGAGGCCTaGTGGGCAACACTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLNVAQATGIQENGYGWRSVREA*WATLLF
Trigger: GAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGA...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACATCTGTGAGAGAGGCCTaGTGGGCAACACTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITSVREA*WATLLF
Trigger: GAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGA...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAGGTCAACTGCACTTCTaGCCTCATGGCTATCGTAAC +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITGQLHF*PHGYRN
Trigger: GTTACGATAGCCATGAGGGCAGAAGTGCAGTTGACC...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACACATTTCTGTAAGAGCTaGATTTTGGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTHFCKS*ILAVDA
Trigger: GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATG...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TTTTCCCTGTATACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTGCAACTCTCACCAGAAGCAGATaGAGGCACCACACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FSLYTREISKVDKVVFATLTRSR*RHHTSC
Trigger: ACAGGAAGTGTGGTGCCTGCATCTGCTTCTGGTGAG...AGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTATACAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACTTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: AQATGIQENGYGWRLAFDFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCAAGCTGTAGCTGGTaGTTATTTGATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAASCSW*LFDGIQ
Trigger: TTGGATCCCATCAAATAACCACCAGCTACAGCTTGC...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACCAGCAAGCTGTAGCTaGTGGTTATTTGATGGGATC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAPASCS*WLFDGI
Trigger: GATCCCATCAAATAACCACCAGCTACAGCTTGCTGG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACACCAGCATGATCTTTaGCTTCACACCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAHQHDL*LHTIPP
Trigger: TGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAGAGAACGGTTATGGGTaGAGACTTGCCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTENGYG*RLAFDK
Trigger: TTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTC...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGTTTACTGCATGTGTaGAGCAAGTCATTATGTAGT +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWSLLHV*SKSLCS
Trigger: ACTACATAATGACTTGCTCCACACATGCAGTAAACT...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAAGACTTGCAAACAGCTaGAGTATTCCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHARLANS*SIPLAW
Trigger: CCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCT...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCAGCTGCACCAGTGGTaGAATCAATCCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHQLHQW*NQSSIH
Trigger: GTGGATGCTGGATTGATTTCACCACTGGTGCAGCTG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACGAATGGCCAGGTTTCTaGGGGCACTTAGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHEWPGF*GHLVLH
Trigger: ATGCAGCACTAAGTGCCCTCAGAAACCTGGCCATTC...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAAAAGAGACAGCAGTCTGTTTaGCTCCCCCATCACACCAGC +
Preference number: 4 (lower is better)
Translates to: LRKSCQVCGSFNSLKRKKRQQSV*LPHHTS
Trigger: GCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCT...CTTTTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGACCATGGAATTATATTTaGTTTCAGGAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGPWNYI*FQEHFS
Trigger: AGAGAAGTGCTCCTGAAATCAAATATAATTCCATGG...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACG +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEATLLFS*LRSLDT
Trigger: CGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLNVAQATGIQENGYGWRKLEMG*CRVSGS
Trigger: ACTGCCCGATACACGGCATCATCCCATCTCTAATTT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTTGGTATGGTAGAGAATaGAGCGGAAGAAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTWYGRE*SGRSRW
Trigger: CCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCA...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCTGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACATGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTACCTTCAAATAACTTCTaGATGGATTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLPSNNF*MDSSPR
Trigger: TCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGG...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAGGCAAAATTTGCAATTaGCAATGCTCCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTGKICN*QCSSKL
Trigger: CAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCC...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCACTTAGTGCTGCATaGTGTACTGTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAALSAA*CTVTFP
Trigger: TGGAAATGTAACAGTACAGCATGCAGCACTAAGTGC...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAVNYNL*TTCLVN
Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCCGGGATCTGTTATACTaGACAGTGACCTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEARDLLY*TVTLNG
Trigger: ACCATTTAAGGTCACTGTGCAGTATAACAGATCCCG...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEARTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCAACCTCAGAAAGTCTTaGCAAGTTTGTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEANLRKS*QVCGSF
Trigger: GAAACTGCCACAAACTTGGCAAGACTTTCTGAGGTT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATAAGCAAAACCCGAAATaGTCTGTAATAGGGATTGTA +
Preference number: 4 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYKQNPK*SVIGIV
Trigger: TACAATCCCTATTACAGAGCATTTCGGGTTTTGCTT...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp AGGCAGGTGGGTCACAGGGAGGTTTTGATTAATTTACAAAGATTGTGTTTCAAATGGTATGGGGCCATCTaGAGAATGAACTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: RQVGHREVLINLQRLCFKWYGAI*RMNWTG
Trigger: GCCAGTCCAGTTCATTCTGCAGATGGCCCCATACCA...TTTGAAACACAATCTTTGTAAATTAATCAAAACCTCCCTGTGACCCACCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACACCCTTTCTACTGTCTTaGAGTCCTTCTATATCGAAG +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTPFLLS*SPSISK
Trigger: CTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGG...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp CTGAATAGAGGTGGTCTACGCAGCCTCTCAAACAAATCTGCTATCTTAGCACAGTCCCTCAGTATACTGTaGTCTGCTTTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: LNRGGLRSLSNKSAILAQSLSIL*SAFVLI
Trigger: TATGAGGACAAAAGCAGAGCACAGTATACTGAGGGA...CTGTGCTAAGATAGCAGATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp ACTTCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSWSLLFSSCTSGEINPAFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...TGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCAAATAACTTCTGCATaGATTCATCTCCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: HACTSGMVENEAEEAAGWQITSA*IHLQEV
Trigger: TACTTCTTGGAGATGAATCCATGCAGAAGTTATTTG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGCTTTATTTATAACTaGAATGGCCAGGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGCFIYN*NGQVSE
Trigger: CTCAGAAACCTGGCCATTCCAGTTATAAATAAAGCA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACACCAGCATGATCTTTaGCTTCACACCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQHQHDL*LHTIPP
Trigger: TGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTG...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACACACCAGCATGATCTTTaGCTTCACACCATTCCACCA +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITHQHDL*LHTIPP
Trigger: TGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTG...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCATCAAGAGCTTCTCATTaGCGGGATCTGTTATACTGC +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHASRASH*RDLLYC
Trigger: GCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGA...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTGGTCAAATTTGGGTATaGGGAGAAGGCAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTGQIWV*GEGRWV
Trigger: GACCCACCTGCCTTCTCCCCATACCCAAATTTGACC...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp GGAAGACTGTGGAGTCAACAGACTTGCAAACAGCTGAAGTATTCCACTTGCTTGCCCGGCAACACAAAATaGTCTTCATCTATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GRLWSQQTCKQLKYSTCLPGNTK*SSSILS
Trigger: GCTCAAAATAGATGAAGACCATTTTGTGTTGCCGGG...CAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp GAGCTTGAAGCGAATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTTCCAGCATCCACACATaGAATTCGCATAAACTAAGT +
Preference number: 4 (lower is better)
Translates to: ELEANGYRNICFLEPCPFSSIHT*NSHKLS
Trigger: ACTTAGTTTATGCGAATTCCATGTGTGGATGCTGGA...AAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATTCGCTTCAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CCA 90 bp TACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTGCAACTCTTTACTTACCCAGGTCCCTCATGAATaGTTAGTACCATCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YQRNQQGRQGCLCNSLLTQVPHE*LVPSPW
Trigger: CCAAGGGGATGGTACTAACCATTCATGAGGGACCTG...GGTAAGTAAAGAGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp TCTGGTGCATACATGTTCCACTCCCGTGTTGATGTATACAACCTAGCTATTACACTTTCTTCCTCCAAATaGGGTAGGGCAGTAACCACT +
Preference number: 4 (lower is better)
Translates to: SGAYMFHSRVDVYNLAITLSSSK*GRAVTT
Trigger: AGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAG...TGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGCACCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
3UTR CAA 72 bp CTTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTCCACTTGCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LWLCRKTVESTD*QTAEVFHLLGF
Trigger: AAATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
3UTR CAA 72 bp TTGGCTACTTCTGCTATGATGTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTCAACAGACTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LATSAMMLATLA*QEDCGVNRLAN
Trigger: GTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR TCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAAGACTTGCAAACAGCTaGAGTATTCCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQRLANS*SIPLAW
Trigger: CCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAAGACTTGCAAACAGCTaGAGTATTCCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLNVAQATGIQENGYGWRRLANS*SIPLAW
Trigger: CCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACT +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITVETCL*QSHDHT
Trigger: AGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCAC...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEALLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACATTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTTCCTGGTCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: LPGLCYLAAAPVVKSIQHLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...ATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR GCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGGCAAAATTTGCAATTaGCAATGCTCCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQGKICN*QCSSKL
Trigger: CAGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCATTTCTGGCAAAATTTaGAATTGCCAATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAISGKI*NCQCSS
Trigger: GCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAAT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAATTTCTGGCAAAATTTaGAATTGCCAATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTISGKI*NCQCSS
Trigger: GCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAAT...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAGCACTTAGTGCTGCATaGTGTACTGTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTALSAA*CTVTFP
Trigger: TGGAAATGTAACAGTACAGCATGCAGCACTAAGTGC...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACGCCATGGTAACTAGATaGTTGATGCCACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHAMVTR*LMPPLC
Trigger: GCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGC...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTCTGTGAGAGAGGCCTaGTGGGCAACACTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHSVREA*WATLLF
Trigger: GAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTCCACAGTAAGTCTCTaGTCTGTGAGAGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHSTVSL*SVREAC
Trigger: GCAGGCCTCTCTCACAGAGCAGAGACTTACTGTGGA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGTCAATTACAATCTGTaGACCACCTGCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQVNYNL*TTCLVN
Trigger: GTTGACCAAGCAGGTGGTGCACAGATTGTAATTGAC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ACTAGGCTGAATAGAGGTGGTCTACGCAGCCTCTCAAACAAATCTGCTATCTTACATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: TRLNRGGLRSLSNKSAILHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...TAAGATAGCAGATTTGTTTGAGAGGCTGCGTAGACCACCTCTATTCAGCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGACAAATAACTTCTGCATaGATTCATCTCCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SHACTSGMVENEAEEAAGQITSA*IHLQEV
Trigger: TACTTCTTGGAGATGAATCCATGCAGAAGTTATTTG...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAGCAAGCTGTAGCTGGTaGTTATTTGATGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITASCSW*LFDGIQ
Trigger: TTGGATCCCATCAAATAACCACCAGCTACAGCTTGC...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGAGAACGGTTATGGGTaGAGACTTGCCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLENGYG*RLAFDK
Trigger: TTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTC...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAATAGTTCCCTTATTTaGACATCAAAGGGAACAATC +
Preference number: 4 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLNSSLI*TSKGTI
Trigger: GATTGTTCCCTTTGATGTCCAAATAAGGGAACTATT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TCTCTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATACTCCCTGATGTGGTTTaGCTGTTTGTCCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLILSSSKWGRAVTTEIILPDVV*LFVPSK
Trigger: TTTGGAAGGGACAAACAGCCAAACCACATCAGGGAG...TATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR TCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGAGAGTACCCTTTaGAATACACTACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAQESTL*NTLPFP
Trigger: AGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTCAAAACTGCCTCTGTaGCCCCAGCTGATAACATCT +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHSKLPL*PQLITS
Trigger: AGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACG +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITTLLFS*LRSLDT
Trigger: CGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGT...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACG +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQTLLFS*LRSLDT
Trigger: CGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATAGTACCAATGAAAACTCCCTaGTGTGGTTTGGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LILSSSKWGRAVTTEIIVPMKTP*CGLAVC
Trigger: ACAAACAGCCAAACCACATCAGGGAGTTTTCATTGG...TACTATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR TCA 90 bp GCATACATGTTCCACTCCCGTGTTGATGTATACAACCTAGCTATTACATGGGCAAGTATGAACCTGGGCTaGACTAAATTAGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: AYMFHSRVDVYNLAITWASMNLG*TKLAAY
Trigger: ATATGCAGCTAATTTAGTTCAGCCCAGGTTCATACT...TGCCCATGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp AGACTGTGGAGTCAACAGACTTGCAAACAGCTGAAGTATTCCACTTGCTTGGATTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: RLWSQQTCKQLKYSTCLDLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...ATCCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR GCA 90 bp AACCTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAATGTTTCCTAGAGCCCTaGCCGTTTGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: NLRKSCQVCGSFNSLKRKCFLEP*PFEAAL
Trigger: AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA...TTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCCCTTCAAATAACTTCTaGATGGATTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RTSHACTSGMVENEAEEAPSNNF*MDSSPR
Trigger: TCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGG...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCACTTAGTGCTGCATaGTGTACTGTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLALSAA*CTVTFP
Trigger: TGGAAATGTAACAGTACAGCATGCAGCACTAAGTGC...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGGTCAACTGCACTTCTaGCCTCATGGCTATCGTAAC +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHGQLHF*PHGYRN
Trigger: GTTACGATAGCCATGAGGGCAGAAGTGCAGTTGACC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACACCTGCTTGGTCAACTaGACTTCTGCCCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYTCLVN*TSALMA
Trigger: AGCCATGAGGGCAGAAGTGCAGTTGACCAAGCAGGT...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACGGGATCTGTTATACTaGACAGTGACCTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQRDLLY*TVTLNG
Trigger: ACCATTTAAGGTCACTGTGCAGTATAACAGATCCCG...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACACATTTTGGCAGTGGATaGCCAGTAATTTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITHFGSG*PVISLR
Trigger: CCTTAGTGAAATTACTGGGCATCCACTGCCAAAATG...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCACACATGGAATTTCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: LFSSCTSGEINPASTHGISSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...AATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCCAGCAAGCTGTAGCTaGTGGTTATTTGATGGGATC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHPASCS*WLFDGI
Trigger: GATCCCATCAAATAACCACCAGCTACAGCTTGCTGG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTCCAGCAAGCTGTAGCTaGTGGTTATTTGATGGGATC +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTPASCS*WLFDGI
Trigger: GATCCCATCAAATAACCACCAGCTACAGCTTGCTGG...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACACATGACTGCGAAGTTTaGATACGACATCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTHDCEV*IRHLEK
Trigger: CTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATG...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGTGAGAGAGGCCTGCTaGGCAACACTTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHVREAC*ATLLFS
Trigger: TGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCAC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
3UTR CAA 72 bp TCATTTTTGGCTACTTCTGCTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTT +
Preference number: 4 (lower is better)
Translates to: SFLATSAMMLAT*ALQEDCGVNRL
Trigger: AAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR TCA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACTCAAAACTGCCTCTGTaGCCCCAGCTGATAACATCT +
Preference number: 4 (lower is better)
Translates to: YNMHILLNVAQATGIQENSKLPL*PQLITS
Trigger: AGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGA...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACGTGGAGACTTGCCTTTaGCAAAGTCATGATCACACT +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHVETCL*QSHDHT
Trigger: AGTGTGATCATGACTTTGTCAAAGGCAAGTCTCCAC...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTCTCAATTTCCTCAGTTaGAAACAAACAAGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLLNFLS*KQTSAK
Trigger: TTTGGCGCTTGTTTGTTTTCAACTGAGGAAATTGAG...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp CTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATAGTACCCCTTGGTGATAAGTaGGTTAGTTCATATGAGATC +
Preference number: 4 (lower is better)
Translates to: LILSSSKWGRAVTTEIIVPLGDK*VSSYEI
Trigger: GATCTCATATGAACTAACTCACTTATCACCAAGGGG...TACTATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACACCTTCAAATAACTTCTaGATGGATTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTPSNNF*MDSSPR
Trigger: TCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGG...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACCTTCAAATAACTTCTaGATGGATTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAPSNNF*MDSSPR
Trigger: TCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAATTTCTGGCAAAATTTaGAATTGCCAATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQISGKI*NCQCSS
Trigger: GCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAAT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTATTTCTGGCAAAATTTaGAATTGCCAATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLISGKI*NCQCSS
Trigger: GCTGGAGCATTGGCAATTGCAAATTTTGCCAGAAAT...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATTTTGTTCTCATGACTaGGAAGTTTGGATACGACAT +
Preference number: 4 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTFCSHD*EVWIRH
Trigger: ATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAA...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCATTTCTGTAAGAGCTaGATTTTGGCAGTGGATGCC +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHHFCKS*ILAVDA
Trigger: GGCATCCACTGCCAAAATGCAGCTCTTACAGAAATG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAATCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQSSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTTCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: LNVAQATGIQENGYGWRLSSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACATGACTGCGAAGTTTaGATACGACATCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQHDCEV*IRHLEK
Trigger: CTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATG...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACGAAGAAGCCGCTGGATaGAGGACAGAGGGGAAATTA +
Preference number: 4 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYEEAAG*RTEGKL
Trigger: TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTGCTCCCGGCAACACAAAATaGTCTTCATCTATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: NPASTHGIRINSFLATSAPGNTK*SSSILS
Trigger: GCTCAAAATAGATGAAGACCATTTTGTGTTGCCGGG...AGCAGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp ATCAATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTGAGTTTAAAGCTGTATaGCACACTTTATGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: INPASTHGIRINSFLATSEFKAV*HTLWSP
Trigger: GGGGGACCATAAAGTGTGCCATACAGCTTTAAACTC...AGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp TCTGGTGCATACATGTTCCACTCCCGTGTTGATGTATACAACCTAGCTATTACAGGAGAAACATTATTCTaGTGCATACATGTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SGAYMFHSRVDVYNLAITGETLF*CIHVPL
Trigger: GAGTGGAACATGTATGCACCAGAATAATGTTTCTCC...TGTAATAGCTAGGTTGTATACATCAACACGGGAGTGGAACATGTATGCACCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR TCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATAGACTTGCAAACAGCTaGAGTATTCCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHRLANS*SIPLAW
Trigger: CCAAGCAAGTGGAATACTTCAGCTGTTTGCAAGTCT...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCCCAGAAGTTTGAACTaGACAGGAGGCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHPRSLN*TGGISD
Trigger: ATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGG...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACCCCAGAAGTTTGAACTaGACAGGAGGCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: YNMHILLNVAQATGIQENPRSLN*TGGISD
Trigger: ATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGG...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACACCATGGAATTATATTTaGTTTCAGGAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: IQENGYGWRLAFDKVMITPWNYI*FQEHFS
Trigger: AGAGAAGTGCTCCTGAAATCAAATATAATTCCATGG...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACCATGGAATTATATTTaGTTTCAGGAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQPWNYI*FQEHFS
Trigger: AGAGAAGTGCTCCTGAAATCAAATATAATTCCATGG...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp GCCCAGGAGAAAGACAACAAACAGTATCATTCTTATAGTAAGTGTAGCATACGTGGTAGAAGTAGTTCCTaGGTGAAACAGCGTATGTAT +
Preference number: 4 (lower is better)
Translates to: AQEKDNKQYHSYSKCSIRGRSSS*VKQRMY
Trigger: ATACATACGCTGTTTCACTCAGGAACTACTTCTACC...ACGTATGCTACACTTACTATAAGAATGATACTGTTTGTTGTCTTTCTCCTGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp TACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTGCAACTCTTTACTTACCTCCTTATTTGTCCAATaGAAACTCCCTGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: YQRNQQGRQGCLCNSLLTSLFVQ*KLPDVV
Trigger: AACCACATCAGGGAGTTTTCATTGGACAAATAAGGA...GGTAAGTAAAGAGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR GCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTTGGAGTCAACAGACTTaGAAACAGCTGAAGTATTCC +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTWSQQT*KQLKYS
Trigger: GGAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCA...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACAGAACATCACATGCATaGACAAGTGGTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHRTSHA*TSGMVE
Trigger: CTCTACCATACCACTTGTGCATGCATGTGATGTTCT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTGCAACTCTTTACTTACCCCTCTCAAACAAATCTaGTATCTTAGCACAGCAACT +
Preference number: 4 (lower is better)
Translates to: YQRNQQGRQGCLCNSLLTPLKQI*YLSTAT
Trigger: AGTTGCTGTGCTAAGATAGCAGATTTGTTTGAGAGG...GGTAAGTAAAGAGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGTCAAAAGTCCAACTTAGATTATCCACAGAGATGTGTAGCATCACATGTTGGATTTGCAGGAAGACTGTaGAGTCAACAGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SQKSNLDYPQRCVASHVGFAGRL*SQQTCK
Trigger: TTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAA...TCCAACATGTGATGCTACACATCTCTGTGGATAATCTAAGTTGGACTTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTGCTATTCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: SSIHTWNSHKLIFGYFCYSSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...ATAGCAGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CCA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAATAACTTCTGCATaGATTCATCTCCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAQITSA*IHLQEV
Trigger: TACTTCTTGGAGATGAATCCATGCAGAAGTTATTTG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHVRAAF*QWMPSN
Trigger: ATTACTGGGCATCCACTGCCAAAATGCAGCTCTTAC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AACCTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAAGAGAACGGTTATGGGTaGAGACTTGCCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: NLRKSCQVCGSFNSLKRKENGYG*RLAFDK
Trigger: TTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTC...TTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408927.8
3UTR CAA 72 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATaGGTATTAGAACATCACATGCATGCACAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQ*VLEHHMHAQVV
Trigger: TACCACTTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCAAGAGAGTACCCTTTaGAATACACTACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHQESTL*NTLPFP
Trigger: AGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACCCCAGAAGTTTGAACTaGACAGGAGGCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYPRSLN*TGGISD
Trigger: ATCTGAAATGCCTCCTGTTCAGTTCAAACTTCTGGG...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGCACTTAGTGCTGCATaGTGTACTGTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: YNMHILLNVAQATGIQENALSAA*CTVTFP
Trigger: TGGAAATGTAACAGTACAGCATGCAGCACTAAGTGC...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACAAATAACTTCTGCATaGATTCATCTCCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLNVAQATGIQENGYGWRQITSA*IHLQEV
Trigger: TACTTCTTGGAGATGAATCCATGCAGAAGTTATTTG...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCATGACTGCGAAGTTTaGATACGACATCTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHHDCEV*IRHLEK
Trigger: CTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCAAGAGAGTACCCTTTaGAATACACTACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHQESTL*NTLPFP
Trigger: AGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTG...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTTGCTATTTAGCAGCTaGACCAGTGGTGAAATCAAT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHLLFSS*TSGEIN
Trigger: ATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp TGCATGTGTGGAGCAAGTCATTATGTAGTACCAAGTTTACATCATCATAGGACTTTTTGTTCTCATGACTaGGAAGTTTGGATACGACAT +
Preference number: 4 (lower is better)
Translates to: CMCGASHYVVPSLHHHRTFCSHD*EVWIRH
Trigger: ATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAA...AGTCCTATGATGATGTAAACTTGGTACTACATAATGACTTGCTCCACACATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR GCA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACCGGGATCTGTTATACTaGACAGTGACCTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYRDLLY*TVTLNG
Trigger: ACCATTTAAGGTCACTGTGCAGTATAACAGATCCCG...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTCCAGCATCCACACATaGAATTCGCATAAACTCATT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHSSIHT*NSHKLI
Trigger: AATGAGTTTATGCGAATTCCATGTGTGGATGCTGGA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTGCTTTATTTATAACTaGAATGGCCAGGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHCFIYN*NGQVSE
Trigger: CTCAGAAACCTGGCCATTCCAGTTATAAATAAAGCA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp TACAAGCAAAACCCGAAATGCTCTGTAATAGGGATTGTAATAGTGATTCTTCAACAAGAGAGTACCCTTTaGAATACACTACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKQNPKCSVIGIVIVILQQESTL*NTLPFP
Trigger: AGGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTG...TTGAAGAATCACTATTACAATCCCTATTACAGAGCATTTCGGGTTTTGCTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR TCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCCATGGAATTATATTTaGTTTCAGGAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHPWNYI*FQEHFS
Trigger: AGAGAAGTGCTCCTGAAATCAAATATAATTCCATGG...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR TCA 90 bp CTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAAAAGCCATGGAATTATATTTaGTTTCAGGAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LRKSCQVCGSFNSLKRKKPWNYI*FQEHFS
Trigger: AGAGAAGTGCTCCTGAAATCAAATATAATTCCATGG...CTTTTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTTTTGTTCTCATGACTaGGAAGTTTGGATACGACAT +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHFCSHD*EVWIRH
Trigger: ATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTGCTTTATTTATAACTaGAATGGCCAGGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHCFIYN*NGQVSE
Trigger: CTCAGAAACCTGGCCATTCCAGTTATAAATAAAGCA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp AGTCAAAAGTCCAACTTAGATTATCCACAGAGATGTGTAGCATCACATGTTGGATTTAAAGACAAGTGCTaGATAATGCTGATTAACTGG +
Preference number: 4 (lower is better)
Translates to: SQKSNLDYPQRCVASHVGFKDKC*IMLINW
Trigger: CCAGTTAATCAGCATTATCCAGCACTTGTCTTTAAA...TCCAACATGTGATGCTACACATCTCTGTGGATAATCTAAGTTGGACTTTTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR GCA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACCCTTCAAATAACTTCTaGATGGATTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYPSNNF*MDSSPR
Trigger: TCTTGGAGATGAATCCATGCAGAAGTTATTTGAAGG...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CCA 90 bp GTGAAACAGCGTATGTATCAGAATCTAAAATACAAGCAAAACCCGAAATGCTCTCAAATAACTTCTGCATaGATTCATCTCCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: VKQRMYQNLKYKQNPKCSQITSA*IHLQEV
Trigger: TACTTCTTGGAGATGAATCCATGCAGAAGTTATTTG...AGAGCATTTCGGGTTTTGCTTGTATTTTAGATTCTGATACATACGCTGTTTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CCA 90 bp TACAAGCAAAACCCGAAATGCTCTGTAATAGGGATTGTAATAGTGATTCTTCAATGCTTTATTTATAACTaGAATGGCCAGGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YKQNPKCSVIGIVIVILQCFIYN*NGQVSE
Trigger: CTCAGAAACCTGGCCATTCCAGTTATAAATAAAGCA...TTGAAGAATCACTATTACAATCCCTATTACAGAGCATTTCGGGTTTTGCTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGCAGACAGCAGTCTGTTaGACTCCCCCATCACACCAG +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRQTAVC*TPPSHQ
Trigger: CTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTG...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGCTGTGCACCACCTGCTaGGTCAACTGCACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HACTSGMVENEAEEAAGWLCTTC*VNCTSA
Trigger: GGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAG...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGCAGTCCTTCTATATCGAAGCCAGACAGCAGTCTGTTaGACTCCCCCATCACACCAG +
Preference number: 5 (lower is better)
Translates to: CHLRGSPFYCLAVLLYRSQTAVC*TPPSHQ
Trigger: CTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTG...GCTTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGCTGCCACGGAGGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTACTGTGCACCACCTGCTaGGTCAACTGCACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLLCTTC*VNCTSA
Trigger: GGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAG...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS TCA 90 bp GAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAGAGATGGGATaGTGCCGTGTATCGGGCAGTTCTCAGCTTTCCACAGTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: EEAAGWRTEGKLEMG*CRVSGSSQLSTVSL
Trigger: GAGACTTACTGTGGAAAGCTGAGAACTGCCCGATACACGGCATCATCCCATCTCTAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGATGGTAACTAGATGCTaGATGCCACCACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRMVTRC*MPPLCT
Trigger: TGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCAT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCCTGTGCACCACCTGCTaGGTCAACTGCACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEALCTTC*VNCTSA
Trigger: GGCAGAAGTGCAGTTGACCAAGCAGGTGGTGCACAG...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS GCA 90 bp TGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTCCTGGTCTTTaGTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCA +
Preference number: 5 (lower is better)
Translates to: CFLEPCPFEAALPGL*YLAAAPVVKSIQHP
Trigger: TGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
ENST00000505378.5
ENST00000507303.5
ENST00000508213.5
ENST00000509011.5
ENST00000510870.5
ENST00000511379.5
ENST00000512857.5
ENST00000515187.5
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGTTGGAGAGGAAGGAGCTACTGTCACCTCCGTGGCAGCCCTTTCTACTGTCTTGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: CWRGRSYCHLRGSPFYCLVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...AAGACAGTAGAAAGGGCTGCCACGGAGGTGACAGTAGCTCCTTCCTCTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp CGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTCCTGGTCTTAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RNICFLEPCPFEAALPGLSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...AAGACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGGTAGCTGGTGGTTATTaGATGGGATCCAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRVAGGY*MGSKRV
Trigger: TACTCTCTTGGATCCCATCAAATAACCACCAGCTAC...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGTGGCAAAATTTGCAATaGCCAATGCTCCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRWQNLQ*PMLQQA
Trigger: AGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCA...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCCAGACAGCAGTCTGTTaGACTCCCCCATCACACCAG +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEAQTAVC*TPPSHQ
Trigger: CTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTG...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: HACTSGMVENEAEEAAGWVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SHACTSGMVENEAEEAAGLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTATTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGCCAAGAGAGTACCCTTaGAAATACACTACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRPREYP*KYTTFS
Trigger: GGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGG...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAGACAGCAGTCTGTTaGACTCCCCCATCACACCAG +
Preference number: 5 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAQTAVC*TPPSHQ
Trigger: CTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAATGGTAACTAGATGCTaGATGCCACCACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLMVTRC*MPPLCT
Trigger: TGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCAT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGAAATCCTGTACTTCCTaGTGTAGACATTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRKSCTS*CRHSDP
Trigger: GGGATCTGAATGTCTACACAAGGAAGTACAGGATTT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAGTCAAGAGCTTCTCATaGGCGGGATCTGTTATACTG +
Preference number: 5 (lower is better)
Translates to: SHACTSGMVENEAEEAAGVKSFS*AGSVIL
Trigger: CAGTATAACAGATCCCGCCAATGAGAAGCTCTTGAC...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATGGGGCCATCAAACCTCAGAAAGTCTaGCCAAGTTTGTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: LSGKVEVANSNSDWYGAIKPQKV*PSLWQF
Trigger: AAACTGCCACAAACTTGGCAAGACTTTCTGAGGTTT...GATGGCCCCATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS TCA 90 bp CTCTGCTCTGTGAGAGAGGCCTGCTGGGCAACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACGACATCTAGAAAAGCCAAATCCTGT +
Preference number: 5 (lower is better)
Translates to: LCSVREACWATLLFS*LRSLDTTSRKAKSC
Trigger: ACAGGATTTGGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCACAGAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCTGCAGTTCTCAGTGGGAAAGTGGAGGTGGCAAACTCTAACAGCGATTGGTATTGGCAAAATTTGCAATaGCCAATGCTCCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: AAVLSGKVEVANSNSDWYWQNLQ*PMLQQA
Trigger: AGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCA...ATACCAATCGCTGTTAGAGTTTGCCACCTCCACTTTCCCACTGAGAACTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACACAGACAGCAGTCTGTTaGACTCCCCCATCACACCAG +
Preference number: 5 (lower is better)
Translates to: IQENGYGWRLAFDKVMITQTAVC*TPPSHQ
Trigger: CTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTG...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACATGGTAACTAGATGCTaGATGCCACCACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: AQATGIQENGYGWRLAFDMVTRC*MPPLCT
Trigger: TGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCAT...GTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAAATCCTGTACTTCCTaGTGTAGACATTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: HACTSGMVENEAEEAAGWKSCTS*CRHSDP
Trigger: GGGATCTGAATGTCTACACAAGGAAGTACAGGATTT...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAGCTCTAAAAACCCATTaGGTGGTGGCAGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTALKTH*VVAVAV
Trigger: CACTGCCACTGCCACCACCAAATGGGTTTTTAGAGC...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp TACTTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTGCAAACAGCTGAAGTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: YFGFAGRLWSQQTCKQLKLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...CTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp AATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NGYRNICFLEPCPFEAALLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...AAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CAA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: SHACTSGMVENEAEEAAGMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: REVPTAVLQLVLEHHMHASTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGCACCAGTGGTGAAATCAATCCAGCATCCACACATGGAATTCGCATAAACTCAAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: CTSGEINPASTHGIRINSSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...TGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGATTTCACCACTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp TCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGAGCTCTTCAGCAATGTTaGTACTGGCAAACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SHACTSGMVENEAEEAAGALQQC*YWQTVL
Trigger: AAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGC...TCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTACATTTCTGGCAAAATTaGCAATTGCCAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLHFWQN*QLPMLQ
Trigger: CTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATG...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCATGGTAACTAGATGCTaGATGCCACCACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEAMVTRC*MPPLCT
Trigger: TGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCAT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACCATGGAATTATATTaGATTTCAGGAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: ACTSGMVENEAEEAAGWRTMELY*ISGALL
Trigger: GAGAAGTGCTCCTGAAATCAAATATAATTCCATGGT...CCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAAATCCTGTACTTCCTaGTGTAGACATTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLKSCTS*CRHSDP
Trigger: GGGATCTGAATGTCTACACAAGGAAGTACAGGATTT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCGAATGGCTATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCAATTGATAAGCTGAGCTaGAAGCGAATGGCTATCGTA +
Preference number: 5 (lower is better)
Translates to: ANGYRNICFLEPCPFEAAIDKLS*KRMAIV
Trigger: TACGATAGCCATTCGCTTCAAGCTCAGCTTATCAAT...TGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATAGCCATTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CAA 90 bp TACCAGAGAAATCAGCAAGGTAGACAAGGTTGTCTTTGCAACTCTTTACTTACCTCTGTGACTTCCCCTTaGTCTCTCTCTCTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: YQRNQQGRQGCLCNSLLTSVTSP*SLSLAP
Trigger: GGGAGCGAGAGAGAGAGACAAAGGGGAAGTCACAGA...GGTAAGTAAAGAGTTGCAAAGACAACCTTGTCTACCTTGCTGATTTCTCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS-3UTR CAA 90 bp TACTTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTGCAAACAGCTGAAGGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: YFGFAGRLWSQQTCKQLKVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...CTTCAGCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp TCTTTGCTATTTAGCAGCTGCACCAGTGGTGAAATCAATCCAGCATCCACACATTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SLLFSSCTSGEINPASTHLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...ATGTGTGGATGCTGGATTGATTTCACCACTGGTGCAGCTGCTAAATAGCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp TATCGTAACATATGTTTCCTAGAGCCCTGCCCGTTTGAAGCAGCACTTCCTGGTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: YRNICFLEPCPFEAALPGMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...ACCAGGAAGTGCTGCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510870.5
CDS-3UTR CAA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LLNVAQATGIQENGYGWRSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGACCATGGAATTATATTaGATTTCAGGAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: HACTSGMVENEAEEAAGWTMELY*ISGALL
Trigger: GAGAAGTGCTCCTGAAATCAAATATAATTCCATGGT...CCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAACAGCGGTTCTTCAATaGGTATTAGAACATCACATG +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLTAVLQ*VLEHHM
Trigger: CATGTGATGTTCTAATACCAATTGAAGAACCGCTGT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS GCA 90 bp CACAAAAGACAGTCAAGAGCTTCTCATTGGCGGGATCTGTTATACTaGACAGTGACCTTAAATGGTCAATTACAATCTGTGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: HKRQSRASHWRDLLY*TVTLNGQLQSVHHL
Trigger: CAGGTGGTGCACAGATTGTAATTGACCATTTAAGGTCACTGTGCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGACTGTCTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000508213.5
ENST00000511212.5
ENST00000511379.5
CDS-3UTR CAA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATGGTAGAGAATGAAGCGGAAGAAGCCGCTGGATGGAGGACAGAGGGGAAATTAAGATCTGAACCAGTTTaGAGCTCAGTAATATCATCT +
Preference number: 5 (lower is better)
Translates to: MVENEAEEAAGWRTEGKLRSEPV*SSVISS
Trigger: AGATGATATTACTGAGCTCAAAACTGGTTCAGATCT...TAATTTCCCCTCTGTCCTCCATCCAGCGGCTTCTTCCGCTTCATTCTCTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGCAGTCCTTCTATATCGAAGCCCATCTTGCCTTTTAGGCCAGTAGTGGTCAAACCAAGAGAGTACCCTTaGAAATACACTACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CSPSISKPILPFRPVVVKPREYP*KYTTFS
Trigger: GGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGG...TTTGACCACTACTGGCCTAAAAGGCAAGATGGGCTTCGATATAGAAGGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACACATTTCTGGCAAAATTaGCAATTGCCAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTHFWQN*QLPMLQ
Trigger: CTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATG...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCAACATTCTTTCCCAATaGTTCAGCAGCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEANILSQ*FSSFCL
Trigger: CAAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
CDS-3UTR CAA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGTCAAGAGCTTCTCATaGGCGGGATCTGTTATACTG +
Preference number: 5 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQVKSFS*AGSVIL
Trigger: CAGTATAACAGATCCCGCCAATGAGAAGCTCTTGAC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCATTGATAAGCTGAGCTaGAAGCGAATGGCTATCGTA +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEAIDKLS*KRMAIV
Trigger: TACGATAGCCATTCGCTTCAAGCTCAGCTTATCAAT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380158.8
ENST00000408900.7
CDS-3UTR CAA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGCTATGATGTTAGCTACTTTGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: CYDVSYFGFAGRLWSQQTMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...AGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp CTTGTTTCCGTATTTCTTCAGGGAGAGAGTTTAAAGCTGTATGGCACACTTTATAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LVSVFLQGESLKLYGTLYSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...ATAAAGTGTGCCATACAGCTTTAAACTCTCTCCCTGAAGAAATACGGAAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCAGCTCTTCAGCAATGTTaGTACTGGCAAACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAALQQC*YWQTVL
Trigger: AAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGC...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACACCAAGAGAGTACCCTTaGAAATACACTACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTPREYP*KYTTFS
Trigger: GGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGG...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGTAGCTGGTGGTTATTaGATGGGATCCAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQVAGGY*MGSKRV
Trigger: TACTCTCTTGGATCCCATCAAATAACCACCAGCTAC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGTAGCTGGTGGTTATTaGATGGGATCCAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: LNVAQATGIQENGYGWRLVAGGY*MGSKRV
Trigger: TACTCTCTTGGATCCCATCAAATAACCACCAGCTAC...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACATTTCTGGCAAAATTaGCAATTGCCAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: REVPTAVLQLVLEHHMHAHFWQN*QLPMLQ
Trigger: CTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATG...TGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAACATTCTTTCCCAATaGTTCAGCAGCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTNILSQ*FSSFCL
Trigger: CAAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCACAGCGGTTCTTCAATaGGTATTAGAACATCACATG +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEATAVLQ*VLEHHM
Trigger: CATGTGATGTTCTAATACCAATTGAAGAACCGCTGT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGCAGTCCTTCTATATCGAAGCCCATCTTGCCTTTTAGGCCAGTAGTGGTCAAATCATATCCTTTAAAATaGCTGCAGTTCTCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: CSPSISKPILPFRPVVVKSYPLK*LQFSVG
Trigger: TCCCACTGAGAACTGCAGCAATTTTAAAGGATATGA...TTTGACCACTACTGGCCTAAAAGGCAAGATGGGCTTCGATATAGAAGGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS GCA 90 bp AGCAGAAAAGTTCTTGAGGTAAACCTCACCATTTTTGGCTACTTCTaGTATGATGTTAGCTACTTTGGCTTTGCAGGAAGACTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: SRKVLEVNLTIFGYF*YDVSYFGFAGRLWS
Trigger: ACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTACCTCAAGAACTTTTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510870.5
ENST00000515187.5
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTTAGCTACTTTGGCTTaGCAGGAAGACTGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHLATLA*QEDCGV
Trigger: GACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGCTCTTCAGCAATGTTaGTACTGGCAAACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQALQQC*YWQTVL
Trigger: AAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGC...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCTCTTCAGCAATGTTaGTACTGGCAAACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LNVAQATGIQENGYGWRLALQQC*YWQTVL
Trigger: AAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGC...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAGATCTGAACCAGTTTaGAGCTCAGTAATATCATCT +
Preference number: 5 (lower is better)
Translates to: LKQQEYKRTVMGGDLPLTRSEPV*SSVISS
Trigger: AGATGATATTACTGAGCTCAAAACTGGTTCAGATCT...TGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTCCAAGAGAGTACCCTTaGAAATACACTACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LNVAQATGIQENGYGWRLPREYP*KYTTFS
Trigger: GGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGG...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAAACATTCTTTCCCAATaGTTCAGCAGCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LLNVAQATGIQENGYGWRNILSQ*FSSFCL
Trigger: CAAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380158.8
ENST00000408927.8
CDS-3UTR CAA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTAACATTCTTTCCCAATaGTTCAGCAGCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LNVAQATGIQENGYGWRLNILSQ*FSSFCL
Trigger: CAAGCAGAAGCTGCTGAACAATTGGGAAAGAATGTT...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380158.8
ENST00000408927.8
CDS-3UTR CAA 90 bp CTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGACTTAAATCCTGTACTTCCTaGTGTAGACATTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: LNVAQATGIQENGYGWRLKSCTS*CRHSDP
Trigger: GGGATCTGAATGTCTACACAAGGAAGTACAGGATTT...AAGTCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAACATCACATGCATGCACAAGTGGTATGGTAGAGAATGAAGCGGAAGAAGCCATTGATAAGCTGAGCTaGAAGCGAATCATTCTCATT +
Preference number: 5 (lower is better)
Translates to: RTSHACTSGMVENEAEEAIDKLS*KRIILI
Trigger: AATGAGAATGATTCGCTTCAAGCTCAGCTTATCAAT...GGCTTCTTCCGCTTCATTCTCTACCATACCACTTGTGCATGCATGTGATGTTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACAGCGGTTCTTCAATaGGTATTAGAACATCACATG +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTTAVLQ*VLEHHM
Trigger: CATGTGATGTTCTAATACCAATTGAAGAACCGCTGT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTTATCCTTTCTTCCTCCAAATGGGGTAGGGCAGTAACCACTGAAATTATAGTAATGTGGTTTGGCTGTTaGTCCCTTCCAAATCTCATG +
Preference number: 5 (lower is better)
Translates to: LILSSSKWGRAVTTEIIVMWFGC*SLPNLM
Trigger: CATGAGATTTGGAAGGGACAAACAGCCAAACCACAT...TACTATAATTTCAGTGGTTACTGCCCTACCCCATTTGGAGGAAGAAAGGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514139.2
CDS CCA 90 bp CCAAATGCAACAAGACACATTTCTGTAAGAGCTGCATTTTGGCAGTaGATGCCCAGTAATTTCACTAAGGTAGGAATAACACCCATATTG +
Preference number: 5 (lower is better)
Translates to: PNATRHISVRAAFWQ*MPSNFTKVGITPIL
Trigger: CAATATGGGTGTTATTCCTACCTTAGTGAAATTACTGGGCATCCACTGCCAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000509011.5
ENST00000509501.5
ENST00000514122.5
ENST00000514139.2
CDS-3UTR CAA 90 bp TACAAGCAAAACCCGAAATGCTCTGTAATAGGGATTGTAATAGTGATTCTTCAAAGCACTTCCTGGTCTTaGCTATTTAGCAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: YKQNPKCSVIGIVIVILQSTSWS*LFSSCT
Trigger: GGTGCAGCTGCTAAATAGCAAAGACCAGGAAGTGCT...TTGAAGAATCACTATTACAATCCCTATTACAGAGCATTTCGGGTTTTGCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAGATCTGAACCAGTTTaGAGCTCAGTAATATCATCT +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTRSEPV*SSVISS
Trigger: AGATGATATTACTGAGCTCAAAACTGGTTCAGATCT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACTGGCAAAATTTGCAATaGCCAATGCTCCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHWQNLQ*PMLQQA
Trigger: AGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCA...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAAAAGATGGTAACTAGATGCTaGATGCCACCACTCTGCACA +
Preference number: 5 (lower is better)
Translates to: LRKSCQVCGSFNSLKRKKMVTRC*MPPLCT
Trigger: TGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCAT...CTTTTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp GGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAACCATGGAATTATATTaGATTTCAGGAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: GGTYSGSSIGIRTSHACTTMELY*ISGALL
Trigger: GAGAAGTGCTCCTGAAATCAAATATAATTCCATGGT...TGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACGGTTATGGGTGGAGAATCCTGCTGCATTCTTaGTTTCTAGTTTACCAGTAC +
Preference number: 5 (lower is better)
Translates to: LLNVAQATGIQENGYGWRILLHS*FLVYQY
Trigger: GTACTGGTAAACTAGAAACAAAGAATGCAGCAGGAT...TCTCCACCCATAACCGTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGCATGCACAAACTCAATTTCCTCAGTaGAAAACAAACAAGCGCCAA +
Preference number: 5 (lower is better)
Translates to: EVPTAVLQLVLEHHMHAQTQFPQ*KTNKRQ
Trigger: TTGGCGCTTGTTTGTTTTCAACTGAGGAAATTGAGT...TTGTGCATGCATGTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACATATCGAAGCCCATCTaGCCTTTTAGGCCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: YNMHILLNVAQATGIQENISKPI*PFRPVV
Trigger: CACTACTGGCCTAAAAGGCAAGATGGGCTTCGATAT...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS CCA 90 bp AAATTACCAAATGCAACAAGACACATTTCTGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAATTTCACTAAGGTAGGAATAACACCC +
Preference number: 5 (lower is better)
Translates to: KLPNATRHISVRAAF*QWMPSNFTKVGITP
Trigger: GGGTGTTATTCCTACCTTAGTGAAATTACTGGGCATCCACTGCCAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATTTGGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000509011.5
ENST00000509501.5
ENST00000514122.5
ENST00000514139.2
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGTGGAGTCAACAGACTaGCAAACAGCTGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHVESTD*QTAEVF
Trigger: GAATACTTCAGCTGTTTGCAAGTCTGTTGACTCCAC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp ATCAATCCAGCATCCACACATGGAATTCGCATAAACTCATTTTTGGCTACTTCTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: INPASTHGIRINSFLATSMMLAT*ALQEDC
Trigger: ACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCAT...AGAAGTAGCCAAAAATGAGTTTATGCGAATTCCATGTGTGGATGCTGGATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503667.5
ENST00000508490.5
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACCCAAGAGAGTACCCTTaGAAATACACTACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHPREYP*KYTTFS
Trigger: GGAAAAGGTAGTGTATTTCAAAGGGTACTCTCTTGG...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGTAGCTGGTGGTTATTaGATGGGATCCAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHVAGGY*MGSKRV
Trigger: TACTCTCTTGGATCCCATCAAATAACCACCAGCTAC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATTGGCAAAATTTGCAATaGCCAATGCTCCAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHWQNLQ*PMLQQA
Trigger: AGCTTGCTGGAGCATTGGCAATTGCAAATTTTGCCA...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GCCCAGGAGAAAGACAACAAACAGTATCATTCTTATAGTAAGTGTAGCATACGTCATTTCTGGCAAAATTaGCAATTGCCAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: AQEKDNKQYHSYSKCSIRHFWQN*QLPMLQ
Trigger: CTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATG...ACGTATGCTACACTTACTATAAGAATGATACTGTTTGTTGTCTTTCTCCTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp ATACAAGAGAACGGTTATGGGTGGAGACTTGCCTTTGACAAAGTCATGATCACAACCATGGAATTATATTaGATTTCAGGAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: IQENGYGWRLAFDKVMITTMELY*ISGALL
Trigger: GAGAAGTGCTCCTGAAATCAAATATAATTCCATGGT...TGTGATCATGACTTTGTCAAAGGCAAGTCTCCACCCATAACCGTTCTCTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380158.8
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACGTCAAGAGCTTCTCATaGGCGGGATCTGTTATACTG +
Preference number: 5 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYVKSFS*AGSVIL
Trigger: CAGTATAACAGATCCCGCCAATGAGAAGCTCTTGAC...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATTGATAAGCTGAGCTaGAAGCGAATGGCTATCGTA +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHIDKLS*KRMAIV
Trigger: TACGATAGCCATTCGCTTCAAGCTCAGCTTATCAAT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380158.8
ENST00000408900.7
CDS-3UTR CAA 90 bp CTCAGAAAGTCTTGCCAAGTTTGTGGCAGTTTCAATAGTCTAAAAAGGAAAAAGGCCCTTTCTACTGTCTaGCAGTCCTTCTATATCGAA +
Preference number: 5 (lower is better)
Translates to: LRKSCQVCGSFNSLKRKKALSTV*QSFYIE
Trigger: TTCGATATAGAAGGACTGCAAGACAGTAGAAAGGGC...CTTTTTCCTTTTTAGACTATTGAAACTGCCACAAACTTGGCAAGACTTTCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS CCA 90 bp CTACATTTGAATTTCAATGGTTCCAAGTTCTTCAGGTCACACTCATaGAAACTCCAAAGAATGGAGATGGCTATCGTAACATATGTTTCC +
Preference number: 5 (lower is better)
Translates to: LHLNFNGSKFFRSHS*KLQRMEMAIVTYVS
Trigger: GGAAACATATGTTACGATAGCCATCTCCATTCTTTGGAGTTTCCATGAGTGTGACCTGAAGAACTTGGAACCATTGAAATTCAAATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512857.5
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATGCTCTTCAGCAATGTTaGTACTGGCAAACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHALQQC*YWQTVL
Trigger: AAGAACAGTTTGCCAGTACAAACATTGCTGAAGAGC...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TACAACATGCACATTCTACTTAATGTAGCTCAAGCAACAGGAATACAAGAGAACAAATCCTGTACTTCCTaGTGTAGACATTCAGATCCC +
Preference number: 5 (lower is better)
Translates to: YNMHILLNVAQATGIQENKSCTS*CRHSDP
Trigger: GGGATCTGAATGTCTACACAAGGAAGTACAGGATTT...GTTCTCTTGTATTCCTGTTGCTTGAGCTACATTAAGTAGAATGTGCATGTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp GTGAAACAGCGTATGTATCAGAATCTAAAATACAAGCAAAACCCGAAATGCTCTCTAGGTACCATGGATTaGACATCAGTAGGAAAGACT +
Preference number: 5 (lower is better)
Translates to: VKQRMYQNLKYKQNPKCSLGTMD*TSVGKT
Trigger: AGTCTTTCCTACTGATGTCAAATCCATGGTACCTAG...AGAGCATTTCGGGTTTTGCTTGTATTTTAGATTCTGATACATACGCTGTTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS-3UTR CAA 90 bp AGAAATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCTAGGTACCATGGATTaGACATCAGTAGGAAAGACT +
Preference number: 5 (lower is better)
Translates to: RNLIREVPTAVLQLVLEHLGTMD*TSVGKT
Trigger: AGTCTTTCCTACTGATGTCAAATCCATGGTACCTAG...ATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACAGATCTGAACCAGTTTaGAGCTCAGTAATATCATCT +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHRSEPV*SSVISS
Trigger: AGATGATATTACTGAGCTCAAAACTGGTTCAGATCT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACCATTTCTGGCAAAATTaGCAATTGCCAATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYHFWQN*QLPMLQ
Trigger: CTGGAGCATTGGCAATTGCAAATTTTGCCAGAAATG...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACACCATGGAATTATATTaGATTTCAGGAGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHTMELY*ISGALL
Trigger: GAGAAGTGCTCCTGAAATCAAATATAATTCCATGGT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp AATCTTATTAGGGAGGTACCTACAGCGGTTCTTCAATTGGTATTAGAACATCACATTGATAAGCTGAGCTaGAAGCGAATCATTCTCATT +
Preference number: 5 (lower is better)
Translates to: NLIREVPTAVLQLVLEHHIDKLS*KRIILI
Trigger: AATGAGAATGATTCGCTTCAAGCTCAGCTTATCAAT...GTGATGTTCTAATACCAATTGAAGAACCGCTGTAGGTACCTCCCTAATAAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
CDS GCA 90 bp TCATTCTGCATTATTACATGTTCACTAGTTGCCATGGTAACTAGATaGTTGATGCCACCACTCTGCACAATGGTTTTAATTACATCTTTT +
Preference number: 5 (lower is better)
Translates to: SFCIITCSLVAMVTR*LMPPLCTMVLITSF
Trigger: AAAAGATGTAATTAAAACCATTGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS GCA 90 bp AATTCTAAAGCTGCTATTAATGCCAAAGCAACAAGAGCTTCATTCTaGATTATTACATGTTCACTAGTTGCCATGGTAACTAGATGCTTG +
Preference number: 5 (lower is better)
Translates to: NSKAAINAKATRASF*IITCSLVAMVTRCL
Trigger: CAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAATGAAGCTCTTGTTGCTTTGGCATTAATAGCAGCTTTAGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp CATTATGTAGTACCAAGTTTACATCATCATAGGACTACAACATGCACATTCTACATCCTGCTGCATTCTTaGTTTCTAGTTTACCAGTAC +
Preference number: 5 (lower is better)
Translates to: HYVVPSLHHHRTTTCTFYILLHS*FLVYQY
Trigger: GTACTGGTAAACTAGAAACAAAGAATGCAGCAGGAT...GTAGAATGTGCATGTTGTAGTCCTATGATGATGTAAACTTGGTACTACATAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408927.8
ENST00000453712.6
CDS-3UTR CAA 90 bp TGGACATCAAAGGGAACAATCAGTCAAGATTCTTTACCTCCATTAGAATTTAACATTGATAAGCTGAGCTaGAAGCGAATCATTCTCATT +
Preference number: 5 (lower is better)
Translates to: WTSKGTISQDSLPPLEFNIDKLS*KRIILI
Trigger: AATGAGAATGATTCGCTTCAAGCTCAGCTTATCAAT...GTTAAATTCTAATGGAGGTAAAGAATCTTGACTGATTGTTCCCTTTGATGTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408927.8
CDS CCA 72 bp GTCTGTTTGACTCCCCCATCACACCAGCATGATCTTTaGCTTCACACCATTCCACCAAACGCTCCACTAACT +
Preference number: 6 (lower is better)
Translates to: VCLTPPSHQHDL*LHTIPPNAPLT
Trigger: AGTTAGTGGAGCGTTTGGTGGAATGGTGTGAAGCCAAAGATCATGCTGGTGTGATGGGGGAGTCAAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS TCA 72 bp TTTACTGTGTCGTATAAGGGCAGACAGCAGTCTGTTTaGCTCCCCCATCACACCAGCATGATCTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: FTVSYKGRQQSV*LPHHTSMIFGF
Trigger: GAAGCCAAAGATCATGCTGGTGTGATGGGGGAGTCAAACAGACTGCTGTCTGCCCTTATACGACACAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS TCA 72 bp GTGAGAGAGGCCTGCTGGGCAACACTTTTGTTCTCATaGCTGCGAAGTTTGGATACGACATCTAGAAAAGCC +
Preference number: 6 (lower is better)
Translates to: VREACWATLLFS*LRSLDTTSRKA
Trigger: GGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGTTGCCCAGCAGGCCTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS CAA 90 bp CTGCCCTCATCATTTTTGGCTACTTCTGCTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTTGCAAACAGC +
Preference number: 6 (lower is better)
Translates to: LPSSFLATSAMMLAT*ALQEDCGVNRLANS
Trigger: GCTGTTTGCAAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGATGAGGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511212.5
CDS GCA 72 bp GAGAGGCCTGCTGGGCAACACTTTTGTTCTCATGACTaGGAAGTTTGGATACGACATCTAGAAAAGCCAAAT +
Preference number: 6 (lower is better)
Translates to: ERPAGQHFCSHD*EVWIRHLEKPN
Trigger: ATTTGGCTTTTCTAGATGTCGTATCCAAACTTCGCAGTCATGAGAACAAAAGTGTTGCCCAGCAGGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS CAA 72 bp TTGCCAATGCTCCAGCAAGCTGTAGCTGGTGGTTATTaGATGGGATCCAAGAGAGTACCCTTTGAAATACAC +
Preference number: 6 (lower is better)
Translates to: LPMLQQAVAGGY*MGSKRVPFEIH
Trigger: GTGTATTTCAAAGGGTACTCTCTTGGATCCCATCAAATAACCACCAGCTACAGCTTGCTGGAGCATTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
ENST00000509501.5
CDS CCA 72 bp TCAGCATGCCACAAAAGACAGTCAAGAGCTTCTCATTaGCGGGATCTGTTATACTGCACAGTGACCTTAAAT +
Preference number: 6 (lower is better)
Translates to: SACHKRQSRASH*RDLLYCTVTLN
Trigger: ATTTAAGGTCACTGTGCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGACTGTCTTTTGTGGCATGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000508213.5
ENST00000511212.5
ENST00000511379.5
CDS CAA 72 bp ATCAGCATGCCACAAAAGACAGTCAAGAGCTTCTCATaGGCGGGATCTGTTATACTGCACAGTGACCTTAAA +
Preference number: 6 (lower is better)
Translates to: ISMPQKTVKSFS*AGSVILHSDLK
Trigger: TTTAAGGTCACTGTGCAGTATAACAGATCCCGCCAATGAGAAGCTCTTGACTGTCTTTTGTGGCATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339360.9
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000508213.5
ENST00000511212.5
ENST00000511379.5
CDS GCA 72 bp AACTGCACTTCTGCCCTCATCATTTTTGGCTACTTCTaGTATGATGTTAGCTACTTTGGCTTTGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: NCTSALIIFGYF*YDVSYFGFAGR
Trigger: TCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGATGAGGGCAGAAGTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511212.5
CDS CAA 72 bp CCATTTTTGGCTACTTCTGCTATGATGTTAGCTACTTaGGCTTTGCAGGAAGACTGTGGAGTCAACAGACTT +
Preference number: 6 (lower is better)
Translates to: PFLATSAMMLAT*ALQEDCGVNRL
Trigger: AAGTCTGTTGACTCCACAGTCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510870.5
ENST00000515187.5
CDS GCA 72 bp GTTCTTGAGGTAAACCTCACCATTTTTGGCTACTTCTaGTATGATGTTAGCTACTTTGGCTTTGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: VLEVNLTIFGYF*YDVSYFGFAGR
Trigger: TCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGGTGAGGTTTACCTCAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510870.5
ENST00000515187.5
CDS GCA 72 bp AAGCTGAGCTTGAAGCGAATCATTTTTGGCTACTTCTaGTATGATGTTAGCTACTTTGGCTTTGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: KLSLKRIIFGYF*YDVSYFGFAGR
Trigger: TCTTCCTGCAAAGCCAAAGTAGCTAACATCATAGCAGAAGTAGCCAAAAATGATTCGCTTCAAGCTCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514122.5
CDS CCA 72 bp AATGCAACAAGACACATTTCTGTAAGAGCTGCATTTTaGCAGTGGATGCCCAGTAATTTCACTAAGGTAGGA +
Preference number: 6 (lower is better)
Translates to: NATRHISVRAAF*QWMPSNFTKVG
Trigger: TCCTACCTTAGTGAAATTACTGGGCATCCACTGCCAAAATGCAGCTCTTACAGAAATGTGTCTTGTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
ENST00000503745.1
ENST00000505378.5
ENST00000507303.5
ENST00000509011.5
ENST00000509501.5
ENST00000514122.5
ENST00000514139.2
CDS CCA 72 bp AATTTCAATGGTTCCAAGTTCTTCAGGTCACACTCATaGAAACTCCAAAGAATGGAGATGGCTATCGTAACA +
Preference number: 6 (lower is better)
Translates to: NFNGSKFFRSHS*KLQRMEMAIVT
Trigger: TGTTACGATAGCCATCTCCATTCTTTGGAGTTTCCATGAGTGTGACCTGAAGAACTTGGAACCATTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512857.5
CDS CAA 90 bp CATTCAGATCCCATAAGAGCACATATCAGGACCATGGAATTATATTaGATTTCAGGAGCACTTCTCTCATCTGCTAGCAGTCTATGTAAA +
Preference number: 6 (lower is better)
Translates to: HSDPIRAHIRTMELY*ISGALLSSASSLCK
Trigger: TTTACATAGACTGCTAGCAGATGAGAGAAGTGCTCCTGAAATCAAATATAATTCCATGGTCCTGATATGTGCTCTTATGGGATCTGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS CAA 72 bp ATTACATGTTCACTAGTTGCCATGGTAACTAGATGCTaGATGCCACCACTCTGCACAATGGTTTTAATTACA +
Preference number: 6 (lower is better)
Translates to: ITCSLVAMVTRC*MPPLCTMVLIT
Trigger: TGTAATTAAAACCATTGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS GCA 72 bp ATTATTACATGTTCACTAGTTGCCATGGTAACTAGATaGTTGATGCCACCACTCTGCACAATGGTTTTAATT +
Preference number: 6 (lower is better)
Translates to: IITCSLVAMVTR*LMPPLCTMVLI
Trigger: AATTAAAACCATTGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6
CDS CAA 90 bp TTCTGCATTATTACATGTTCACTAGTTGCCATGGTAACTAGATGCTaGATGCCACCACTCTGCACAATGGTTTTAATTACATCTTTTGAT +
Preference number: 6 (lower is better)
Translates to: FCIITCSLVAMVTRC*MPPLCTMVLITSFD
Trigger: ATCAAAAGATGTAATTAAAACCATTGTGCAGAGTGGTGGCATCAAGCATCTAGTTACCATGGCAACTAGTGAACATGTAATAATGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264572.11
ENST00000339360.9
ENST00000380158.8
ENST00000408900.7
ENST00000408927.8
ENST00000453712.6